View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF0999-INSERTION-16 (Length: 573)

Name: NF0999-INSERTION-16
Description: NF0999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF0999-INSERTION-16
NF0999-INSERTION-16
[»] chr8 (44 HSPs)
chr8 (249-573)||(21124176-21124500)
chr8 (7-351)||(21124430-21124775)
chr8 (138-424)||(18323997-18324281)
chr8 (139-424)||(22469429-22469713)
chr8 (143-427)||(25149238-25149522)
chr8 (139-424)||(23976086-23976370)
chr8 (176-382)||(35202638-35202845)
chr8 (138-260)||(12106862-12106984)
chr8 (138-382)||(4288917-4289164)
chr8 (191-405)||(22326454-22326668)
chr8 (286-427)||(21184294-21184434)
chr8 (202-382)||(37543851-37544031)
chr8 (138-265)||(21185819-21185946)
chr8 (138-329)||(31253997-31254181)
chr8 (139-257)||(23625135-23625253)
chr8 (210-402)||(24609093-24609285)
chr8 (282-424)||(22426845-22426986)
chr8 (282-422)||(12106974-12107114)
chr8 (269-355)||(29585576-29585662)
chr8 (142-246)||(37543968-37544072)
chr8 (309-384)||(23625072-23625147)
chr8 (239-366)||(41358778-41358905)
chr8 (138-402)||(10289214-10289481)
chr8 (138-237)||(12107020-12107119)
chr8 (319-422)||(12106867-12106970)
chr8 (153-215)||(37494325-37494387)
chr8 (143-246)||(23976267-23976368)
chr8 (143-246)||(25149414-25149517)
chr8 (319-384)||(23976129-23976194)
chr8 (288-329)||(37494422-37494463)
chr8 (169-246)||(41358858-41358935)
chr8 (142-225)||(21184298-21184381)
chr8 (319-382)||(22326446-22326509)
chr8 (143-246)||(22426847-22426949)
chr8 (143-246)||(22469608-22469711)
chr8 (319-381)||(10289374-10289436)
chr8 (192-246)||(18324046-18324100)
chr8 (286-351)||(31254007-31254072)
chr8 (299-351)||(29585574-29585626)
chr8 (245-319)||(29585584-29585658)
chr8 (138-208)||(31250295-31250365)
chr8 (319-384)||(25149276-25149341)
chr8 (352-405)||(37494332-37494385)
chr8 (307-351)||(22426949-22426993)
[»] chr6 (24 HSPs)
chr6 (138-429)||(13536553-13536845)
chr6 (138-427)||(19295276-19295565)
chr6 (138-425)||(25089149-25089436)
chr6 (138-427)||(10587882-10588155)
chr6 (138-422)||(21222460-21222746)
chr6 (138-325)||(26705125-26705312)
chr6 (138-427)||(10672614-10672900)
chr6 (176-427)||(10862008-10862258)
chr6 (143-246)||(13536560-13536663)
chr6 (143-246)||(10588047-10588150)
chr6 (143-246)||(25089152-25089255)
chr6 (143-237)||(28752242-28752336)
chr6 (142-243)||(21222644-21222747)
chr6 (245-329)||(26705089-26705173)
chr6 (143-246)||(19295457-19295560)
chr6 (319-384)||(13536737-13536802)
chr6 (331-428)||(28752236-28752333)
chr6 (242-373)||(12651182-12651312)
chr6 (143-245)||(10862013-10862115)
chr6 (287-384)||(19780514-19780611)
chr6 (319-387)||(10862189-10862256)
chr6 (333-384)||(10587925-10587976)
chr6 (319-384)||(25089328-25089393)
chr6 (282-351)||(26705131-26705200)
[»] chr1 (12 HSPs)
chr1 (138-427)||(50335436-50335725)
chr1 (139-405)||(37607989-37608254)
chr1 (138-402)||(13735465-13735728)
chr1 (142-416)||(8097714-8097988)
chr1 (139-382)||(42847065-42847301)
chr1 (151-265)||(11633287-11633401)
chr1 (143-246)||(50335441-50335544)
chr1 (138-248)||(32373981-32374090)
chr1 (309-428)||(11633188-11633307)
chr1 (269-384)||(32374092-32374200)
chr1 (319-384)||(50335617-50335682)
chr1 (153-246)||(37607982-37608075)
[»] chr7 (26 HSPs)
chr7 (138-405)||(27508593-27508860)
chr7 (145-427)||(5080111-5080393)
chr7 (138-427)||(38760989-38761276)
chr7 (141-382)||(14197457-14197698)
chr7 (140-426)||(15000641-15000928)
chr7 (176-384)||(6441378-6441585)
chr7 (142-354)||(45012848-45013059)
chr7 (140-298)||(36150940-36151098)
chr7 (138-367)||(3404513-3404740)
chr7 (140-255)||(15272320-15272435)
chr7 (286-427)||(43257375-43257516)
chr7 (140-298)||(43257261-43257419)
chr7 (174-405)||(37787718-37787945)
chr7 (281-429)||(36150841-36150989)
chr7 (143-246)||(38761168-38761271)
chr7 (137-246)||(5080285-5080394)
chr7 (143-246)||(27508577-27508679)
chr7 (176-246)||(6441520-6441590)
chr7 (319-382)||(15272363-15272426)
chr7 (319-422)||(27508752-27508855)
chr7 (178-246)||(43257408-43257476)
chr7 (321-384)||(3404634-3404697)
chr7 (171-246)||(14197635-14197710)
chr7 (319-422)||(15000822-15000925)
chr7 (143-246)||(36150848-36150951)
chr7 (319-380)||(6441387-6441447)
[»] chr4 (57 HSPs)
chr4 (138-426)||(30470813-30471101)
chr4 (142-384)||(18830574-18830815)
chr4 (139-423)||(5448195-5448479)
chr4 (140-428)||(2634021-2634309)
chr4 (138-364)||(5324678-5324904)
chr4 (138-344)||(37694895-37695101)
chr4 (139-424)||(2063144-2063429)
chr4 (138-338)||(10757565-10757765)
chr4 (138-338)||(10970736-10970936)
chr4 (176-427)||(10380633-10380879)
chr4 (142-402)||(11821743-11822007)
chr4 (141-384)||(18836278-18836520)
chr4 (143-384)||(9826670-9826911)
chr4 (138-384)||(2232367-2232611)
chr4 (138-319)||(22017877-22018058)
chr4 (199-430)||(47943504-47943735)
chr4 (138-312)||(12140662-12140836)
chr4 (141-425)||(18500596-18500878)
chr4 (251-425)||(55382664-55382838)
chr4 (143-405)||(30378759-30379017)
chr4 (255-382)||(3370005-3370132)
chr4 (142-260)||(47463813-47463931)
chr4 (281-429)||(22017988-22018136)
chr4 (150-345)||(1387286-1387480)
chr4 (284-402)||(8951129-8951247)
chr4 (190-351)||(47144760-47144921)
chr4 (143-246)||(55382732-55382835)
chr4 (245-382)||(1387444-1387582)
chr4 (138-259)||(3391170-3391296)
chr4 (286-404)||(37695075-37695193)
chr4 (315-404)||(29908907-29908996)
chr4 (143-246)||(30470994-30471097)
chr4 (181-319)||(8951058-8951196)
chr4 (143-246)||(1387519-1387622)
chr4 (143-246)||(2634200-2634303)
chr4 (143-246)||(5448196-5448299)
chr4 (143-246)||(47943624-47943727)
chr4 (240-312)||(29908967-29909039)
chr4 (331-427)||(47463809-47463905)
chr4 (143-246)||(22018026-22018129)
chr4 (141-232)||(55382576-55382667)
chr4 (282-344)||(12140774-12140836)
chr4 (282-351)||(1387385-1387454)
chr4 (319-384)||(5448372-5448437)
chr4 (142-243)||(9826631-9826732)
chr4 (319-416)||(22017888-22017985)
chr4 (370-427)||(47463916-47463973)
chr4 (178-246)||(2232546-2232614)
chr4 (143-246)||(10380771-10380874)
chr4 (138-237)||(17381561-17381660)
chr4 (301-351)||(10757696-10757746)
chr4 (301-351)||(10970867-10970917)
chr4 (318-384)||(37694938-37695004)
chr4 (333-422)||(10757570-10757659)
chr4 (333-422)||(10970741-10970830)
chr4 (357-422)||(30378952-30379017)
chr4 (190-246)||(8951164-8951220)
[»] chr3 (45 HSPs)
chr3 (138-426)||(21514740-21515028)
chr3 (176-427)||(48755322-48755574)
chr3 (171-428)||(1426478-1426726)
chr3 (138-366)||(11989040-11989268)
chr3 (138-427)||(33343001-33343288)
chr3 (139-351)||(15031291-15031503)
chr3 (176-402)||(44967875-44968100)
chr3 (139-303)||(38498222-38498386)
chr3 (139-358)||(15005022-15005241)
chr3 (245-427)||(15031183-15031365)
chr3 (143-384)||(18445405-18445646)
chr3 (142-319)||(26498547-26498724)
chr3 (144-355)||(14434641-14434852)
chr3 (142-384)||(26920193-26920435)
chr3 (140-297)||(20759052-20759209)
chr3 (282-422)||(26498655-26498795)
chr3 (310-427)||(20758954-20759071)
chr3 (138-429)||(43562604-43562886)
chr3 (169-265)||(39541767-39541863)
chr3 (282-424)||(38498133-38498275)
chr3 (143-246)||(15031188-15031291)
chr3 (143-246)||(48755327-48755430)
chr3 (316-426)||(42453039-42453149)
chr3 (314-434)||(39541662-39541782)
chr3 (143-274)||(41984905-41985036)
chr3 (141-375)||(26840038-26840268)
chr3 (143-246)||(21514744-21514847)
chr3 (143-245)||(33343006-33343108)
chr3 (215-329)||(36383091-36383205)
chr3 (319-384)||(48755504-48755569)
chr3 (281-425)||(7300157-7300300)
chr3 (143-246)||(26498692-26498795)
chr3 (338-427)||(33412199-33412288)
chr3 (319-384)||(39541786-39541851)
chr3 (334-422)||(26498548-26498636)
chr3 (143-246)||(1426484-1426587)
chr3 (142-243)||(18445584-18445685)
chr3 (143-246)||(20758959-20759062)
chr3 (319-382)||(20759103-20759166)
chr3 (319-422)||(21514920-21515023)
chr3 (312-351)||(38498238-38498277)
chr3 (319-422)||(38498279-38498382)
chr3 (282-344)||(36383108-36383170)
chr3 (331-384)||(15005146-15005199)
chr3 (138-166)||(48755553-48755581)
[»] chr5 (26 HSPs)
chr5 (138-416)||(10760003-10760280)
chr5 (138-425)||(2555436-2555723)
chr5 (141-416)||(21943741-21944016)
chr5 (138-429)||(13753224-13753515)
chr5 (140-365)||(17497052-17497277)
chr5 (138-375)||(30100609-30100843)
chr5 (211-427)||(30852581-30852790)
chr5 (143-384)||(19491710-19491951)
chr5 (138-364)||(20429872-20430098)
chr5 (138-416)||(31912191-31912469)
chr5 (215-413)||(34419489-34419687)
chr5 (145-323)||(21211419-21211596)
chr5 (140-402)||(19564650-19564914)
chr5 (141-256)||(43548938-43549053)
chr5 (216-366)||(11298015-11298165)
chr5 (201-313)||(32539326-32539437)
chr5 (143-246)||(13753405-13753508)
chr5 (142-201)||(34419672-34419731)
chr5 (191-365)||(12895585-12895757)
chr5 (319-416)||(21211423-21211520)
chr5 (319-382)||(17497171-17497234)
chr5 (145-246)||(10760183-10760284)
chr5 (319-422)||(21943743-21943846)
chr5 (143-196)||(30852586-30852639)
chr5 (348-384)||(21211604-21211640)
chr5 (152-228)||(34419489-34419565)
[»] chr2 (18 HSPs)
chr2 (138-403)||(22092879-22093144)
chr2 (138-429)||(24006875-24007166)
chr2 (168-366)||(31499376-31499573)
chr2 (138-319)||(32092754-32092935)
chr2 (210-382)||(39598574-39598746)
chr2 (145-427)||(31819910-31820191)
chr2 (284-384)||(32092868-32092968)
chr2 (143-246)||(39598683-39598786)
chr2 (286-364)||(8219198-8219275)
chr2 (321-422)||(32092759-32092860)
chr2 (176-246)||(32092903-32092973)
chr2 (144-230)||(31499542-31499629)
chr2 (319-384)||(24006918-24006983)
chr2 (168-242)||(22092885-22092959)
chr2 (193-312)||(17914083-17914202)
chr2 (143-246)||(31819915-31820017)
chr2 (319-384)||(17914149-17914214)
chr2 (291-351)||(8219242-8219302)
[»] scaffold0102 (1 HSPs)
scaffold0102 (141-429)||(23885-24172)
[»] scaffold0011 (2 HSPs)
scaffold0011 (139-405)||(190174-190440)
scaffold0011 (182-246)||(190354-190418)
[»] scaffold0407 (8 HSPs)
scaffold0407 (138-329)||(831-1021)
scaffold0407 (138-329)||(7295-7485)
scaffold0407 (282-384)||(1006-1108)
scaffold0407 (282-384)||(7470-7572)
scaffold0407 (319-416)||(842-938)
scaffold0407 (319-416)||(7306-7402)
scaffold0407 (282-351)||(942-1011)
scaffold0407 (282-351)||(7406-7475)
[»] scaffold0003 (1 HSPs)
scaffold0003 (203-374)||(314126-314296)
[»] scaffold0026 (1 HSPs)
scaffold0026 (143-384)||(57487-57728)
[»] scaffold0024 (2 HSPs)
scaffold0024 (143-384)||(127842-128083)
scaffold0024 (142-243)||(127803-127904)
[»] scaffold1300 (1 HSPs)
scaffold1300 (143-325)||(1447-1629)
[»] scaffold0066 (2 HSPs)
scaffold0066 (144-425)||(15362-15638)
scaffold0066 (143-246)||(15365-15468)
[»] scaffold0049 (3 HSPs)
scaffold0049 (149-293)||(59711-59855)
scaffold0049 (282-325)||(59812-59855)
scaffold0049 (319-384)||(59743-59808)
[»] scaffold0018 (4 HSPs)
scaffold0018 (141-227)||(72106-72192)
scaffold0018 (188-296)||(72008-72116)
scaffold0018 (282-384)||(71946-72054)
scaffold0018 (178-230)||(71943-71995)
[»] scaffold0039 (3 HSPs)
scaffold0039 (140-324)||(27486-27670)
scaffold0039 (319-422)||(27489-27592)
scaffold0039 (281-329)||(27595-27643)
[»] scaffold0047 (4 HSPs)
scaffold0047 (282-427)||(11601-11745)
scaffold0047 (138-319)||(11676-11855)
scaffold0047 (143-246)||(11606-11708)
scaffold0047 (319-416)||(11749-11844)


Alignment Details
Target: chr8 (Bit Score: 257; Significance: 1e-143; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 249 - 573
Target Start/End: Complemental strand, 21124500 - 21124176
Alignment:
Q  249 gggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaa 348  Q
    ||||||||| || ||||  ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  |    
T  21124500 gggactaaattgactaacggagtctacactaggggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatttagaga 21124401  T
Q  349 ctattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctcccttcttttatgtgtcaacttac 448  Q
    ||||||| |||||||||||||||||| ||||||||| ||||||| |||||||||||| || ||||| |||||||||||||||||||||||||||||||||    
T  21124400 ctattttgcaatttatctgtattcagagactaaagtgacgtctcctttcctattcagggactaaagcggctaatctcccttcttttatgtgtcaacttac 21124301  T
Q  449 ttgattcttcaactttttattccctgtccacatgtttctctcttttcacttgctctttaattacaagcaaacaaagcctcaaactaatatttagttaaga 548  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21124300 ttgattcttcaactttttattccctgtccacatgtttctttcttttcacttgctctttaattacaagcaaacaaagcctcaaactaatatttagttaaga 21124201  T
Q  549 gaatgtaatcccacttcctatcata 573  Q
    |||||||||||||||||||||||||    
T  21124200 gaatgtaatcccacttcctatcata 21124176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 7 - 351
Target Start/End: Complemental strand, 21124775 - 21124430
Alignment:
Q  7 atcatgaacaacagttcaatttaatatttaatcagaaggg-tttgtttcctctctaaaaagtcatcacttcatggatctacaatgcgcatacgcagagtc 105  Q
    |||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21124775 atcatgaacaacagatcaatttaatatttaattagaaggggtttgtttcctctctaaaaagtcatcacttcatggatctacaatgcgcataagcagagtc 21124676  T
Q  106 gtgtgaatatgcatttttagtattcttttacgggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaa 205  Q
     ||||||||||||||||||||||||||||  | ||||||||||||||||||| | |||||||||||| ||||||||||||||| ||||||||||||||||    
T  21124675 atgtgaatatgcatttttagtattcttttgtgagggaattagtcactttagttcttgaatgagaaaggagtagtcactttaattcctgaatgtagagaaa 21124576  T
Q  206 ttgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtct 305  Q
    ||| |||||||||| |||||||||||| ||||||||||||| | ||||||||||||||||  ||||||||||| | |||||||||||||||||| |||||    
T  21124575 ttgcaaaacagtccttgaatgtagactctgttggtcaattttatggactaaagtggctaacggagtctacactaggggactaaattgactaacggagtct 21124476  T
Q  306 gcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
     || |  |||||||||||||||||   ||||| |||||||| ||||    
T  21124475 acactaggggactaaattgactaacgaagtctgcattcagggacta 21124430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 138 - 424
Target Start/End: Complemental strand, 18324281 - 18323997
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||| ||| |||| ||||||||||||||||| ||||||| |||| |||||||||| |||||||||| |||||||||| ||||||| |||| || |    
T  18324281 ggggaattaatcattttaatccctgaatgagaaagacgtagtcattttagtccctgaatgcagagaaattgcaaaacagtccatgaatgtcgactctgct 18324182  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||| | ||||||||| ||||  ||||||||| |  ||||||||||||||||||| ||| |||||||||| |||||||||||||||| |||||    
T  18324181 ggtcaatttcatgaactaaagtgactaacggagtctacatttaaggactaaattgactaacggagtttgcattcaggaactaaattgactaataaagtct 18324082  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatct 424  Q
    ||||||||| |||||||||||||||||||| ||||| | |||||| | |||   |||||||| ||||| || ||||||| |||||||    
T  18324081 acattcagggactattttacaatttatctgcattcatgaactaaaatgacg--acatttcctgttcagcgactaaagtgactaatct 18323997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 139 - 424
Target Start/End: Original strand, 22469429 - 22469713
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    ||||||||||||||||| |||||||||| ||||| ||||| ||||||  | ||||||||||||||||||| ||||||||||||||||| ||||| |||||    
T  22469429 gggaattagtcactttaatccctgaatgggaaaggagtagccactttcgttcctgaatgtagagaaattgcaaaacagtccctgaatgcagactctgttg 22469528  T
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtcta 338  Q
    |||||||||||||| ||| ||| ||||  |||| || | ||  |||||||||||||||| | ||| || ||||||||| |||||||||||| ||| ||||    
T  22469529 gtcaatttcagggattaaggtgactaacggagttta-attcagggactaaattgactaatggagtttgaattcagggattaaattgactaacagaatcta 22469627  T
Q  339 cattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatct 424  Q
    ||||| ||||||||||||||||||||||| ||| | |||||||||| ||| |||||||| |||||| ||| ||||||| |||||||    
T  22469628 cattctggaactattttacaatttatctgcatttaaggactaaagtgacgactcatttcttattcatagactaaagtgactaatct 22469713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 143 - 427
Target Start/End: Original strand, 25149238 - 25149522
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||| |||||||||||||||  |||  |||||||||||||||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||    
T  25149238 attagtcattttagtccctgaatggaaaaagagtagtcactttaatccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgttggtca 25149337  T
Q  243 atttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatt 342  Q
    |||||| ||||||||||| | ||  | ||||||  ||  ||||||| |||||||||  ||||||||||||| ||||||||||||||| | ||||||||||    
T  25149338 atttcaaggactaaagtgacgaacggtgtctacgttcagggactaacttgactaacagagtctgcattcagagactaaattgactaacaaagtctacatt 25149437  T
Q  343 caggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    |||  | |||||| || |||||||| |||||| ||||| ||| ||| |||||||||||||||| || ||||||| ||||||||||    
T  25149438 cagagattattttgcagtttatctgcattcagagactatagtgacgactcatttcctattcagggactaaagtgactaatctccc 25149522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 139 - 424
Target Start/End: Original strand, 23976086 - 23976370
Alignment:
Q  139 gggaattagtcactttagtccctgaatg-agaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||| |||||| | |||||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  23976086 gggaattagtcactttagtccttgaatggaaaaagaagtagtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtt 23976185  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
     |||||||||||||| ||||||| |||| |   |||||| ||  || |||||||||| |||| ||||||||||||||| ||||||||||||| |||| ||    
T  23976186 agtcaatttcagggagtaaagtgactaacatgatctacattcaggggctaaattgaccaacggagtctgcattcaggggctaaattgactaacagag-ct 23976284  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatct 424  Q
    ||||||||| |||||||||||||||||||  ||||||| |||||| | ||| |||||||| |||| || || ||||||| |||||||    
T  23976285 acattcagggactattttacaatttatctacattcaggaactaaaatgacgactcatttcttattgag-gactaaagtgactaatct 23976370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 176 - 382
Target Start/End: Complemental strand, 35202845 - 35202638
Alignment:
Q  176 tagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctac 275  Q
    ||||||||||| | |||||||| |||||||||| ||||||||||||||||||  ||| ||||||||||||||||| ||||||||| ||||  ||||||||    
T  35202845 tagtcactttagttcctgaatgcagagaaattgcaaaacagtccctgaatgtttactctgttggtcaatttcaggaactaaagtgactaacggagtctac 35202746  T
Q  276 actc-gaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcag 374  Q
    | || | |||||||||||||||||  | |||||||||||| |||||||||||||| | |||||||||| | | || ||||| |||||||| || ||||||    
T  35202745 attcaggggactaaattgactaacagaatctgcattcaggaactaaattgactaacatagtctacatttaaggaccattttgcaatttatttgcattcag 35202646  T
Q  375 ggactaaa 382  Q
    ||||||||    
T  35202645 ggactaaa 35202638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 138 - 260
Target Start/End: Original strand, 12106862 - 12106984
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||| |||||||||| ||||||||||||| ||||||||| ||||    
T  12106862 ggggaattagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctggatgtagactctgtt 12106961  T
Q  238 ggtcaatttcagggactaaagtg 260  Q
    |||||||||||||||||||||||    
T  12106962 ggtcaatttcagggactaaagtg 12106984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 382
Target Start/End: Original strand, 4288917 - 4289164
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgt- 236  Q
    ||||||||||||| |||||||||||| ||  ||| |||||||||||||| | | ||||||||||||||||| |||||| |||  ||||||||||| | |     
T  4288917 ggggaattagtcattttagtccctgattggaaaaaaagtagtcactttagttcatgaatgtagagaaattgcaaaacattcctcgaatgtagactcttta 4289016  T
Q  237 --tggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagag 334  Q
      | |||||||||||||| ||||||| |||| |||||||||| || | ||||||||||| ||||  |||||||||| || ||||||||||||||| | ||    
T  4289017 attagtcaatttcagggattaaagtgactaacagagtctacattcaaagactaaattgattaacatagtctgcatttagagactaaattgactaacatag 4289116  T
Q  335 tctacattcaggaactattttacaatttatctgtattcagggactaaa 382  Q
    ||| | ||||   |||||||| ||| ||||||| ||||  ||||||||    
T  4289117 tctgcgttcaaagactattttgcaacttatctgcattcgtggactaaa 4289164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 191 - 405
Target Start/End: Original strand, 22326454 - 22326668
Alignment:
Q  191 ctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaat 290  Q
    |||||||  |||||||||||||| ||||| |||||||||||| | ||||||||||| |||||||||||||  |||  || |||||| ||  | |||||||    
T  22326454 ctgaatgctgagaaattgtaaaatagtccttgaatgtagactctattggtcaattttagggactaaagtgattaacggaatctacattcaggaactaaat 22326553  T
Q  291 tgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtc 390  Q
     | |||||||| ||||||||||| ||||||||||| ||| | | |||| ||| | | | |||||||||||||||||| ||||| ||||||||||  || |    
T  22326554 aggctaacgaaatctgcattcagagactaaattgattaacaaaatctatatttaaggattattttacaatttatctgcattcaaggactaaagtggcgcc 22326653  T
Q  391 tcatttcctattcag 405  Q
    |||| | ||||||||    
T  22326654 tcatattctattcag 22326668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 286 - 427
Target Start/End: Complemental strand, 21184434 - 21184294
Alignment:
Q  286 taaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagta 385  Q
    |||||||| ||||| |||||| |||||||||||||||||||||||| ||| || ||||||| |||||||| ||||||||||| |||| ||||||| |||     
T  21184434 taaattgattaacggagtctgtattcagggactaaattgactaata-agtttatattcagggactattttgcaatttatctgcattcggggactagagtg 21184336  T
Q  386 acgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||| |||||||||||||||| || ||||||| ||||| ||||    
T  21184335 acgactcatttcctattcagggactaaagtgactaatttccc 21184294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 202 - 382
Target Start/End: Original strand, 37543851 - 37544031
Alignment:
Q  202 gaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaa 301  Q
    ||||||| |||| ||| | |||||||| ||||| ||||||||||||| |||||||||||  |||  ||||||| | ||  |||||||||| ||||||| |    
T  37543851 gaaattgcaaaatagttcatgaatgtaaactttattggtcaatttcatggactaaagtgattaacggagtctatattcagggactaaattaactaacgga 37543950  T
Q  302 gtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaa 382  Q
     |||||||||||||| |||||||||||| | |||||||| |||   |||||||| ||||||||||  ||||||||||||||    
T  37543951 atctgcattcagggattaaattgactaacaaagtctacaatcaatgactattttgcaatttatctacattcagggactaaa 37544031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 138 - 265
Target Start/End: Complemental strand, 21185946 - 21185819
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||||  || |||||| |||||  ||||| ||| |||||| ||||    
T  21185946 ggggaattagtcactttagtcgctgaatgagaaatgagtagtcactttagtccctgaatgctgaaaaattgaaaaacgttccctaaatatagactctgtt 21185847  T
Q  238 ggtcaatttcagggactaaagtggctaa 265  Q
    ||||||||||| ||||||||||| ||||    
T  21185846 ggtcaatttcatggactaaagtgactaa 21185819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 138 - 329
Target Start/End: Complemental strand, 31254181 - 31253997
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||| | |||||||||||| |||| |||||||||   ||||||| || || |||| ||| |||||||||    |||| ||||||||||||  |||    
T  31254181 ggggaattaattactttagtccctaaatgggaaagaagt---cactttagtctctaaatgcagaaaaattgtaa----gtccttgaatgtagactccgtt 31254089  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaa 329  Q
    ||| ||||||||||| ||||||| |||| | | |||||| |   |||||||||||||||||  |||||||||||||||||||||||||||||    
T  31254088 ggttaatttcagggattaaagtgactaacaaaatctacatttagggactaaattgactaacagagtctgcattcagggactaaattgactaa 31253997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 139 - 257
Target Start/End: Complemental strand, 23625253 - 23625135
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    |||||||||||||||||||| ||||||  |||| |||||||||||||||||  ||  || ||||||||||||||||| | ||||||||||||||  ||||    
T  23625253 gggaattagtcactttagtctctgaataggaaaaaagtagtcactttaatctttgggtgcagagaaattgtaaaacacttcctgaatgtagactgcgttg 23625154  T
Q  239 gtcaatttcagggactaaa 257  Q
     ||||||||||||||||||    
T  23625153 atcaatttcagggactaaa 23625135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 210 - 402
Target Start/End: Original strand, 24609093 - 24609285
Alignment:
Q  210 aaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcat 309  Q
    ||||||||||||||||||||| | ||||||| | ||| || || ||||| | ||||| ||||||||| ||   ||||||||| | ||||  |||||||||    
T  24609093 aaaacagtccctgaatgtagattatgttggtaatttttagagattaaagcgactaattgagtctacattcagagactaaattaattaacagagtctgcat 24609192  T
Q  310 tcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctatt 402  Q
    | | | |||||||||||||| |||  |||||| || ||||||||||||||||||| || ||||||| |||||||| | | ||| |||||||||    
T  24609193 ttaagaactaaattgactaacagaacctacatccaagaactattttacaatttatttgcattcaggaactaaagtgaagactcctttcctatt 24609285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 282 - 424
Target Start/End: Complemental strand, 22426986 - 22426845
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaa 381  Q
    |||| |||||||||||   || || ||||||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||| | ||||| |||||||    
T  22426986 ggaccaaattgactaaaagagactacattcagggactaaattgactaacagagactacattcagggactattttgcaatttatc-gcattcatggactaa 22426888  T
Q  382 agtaacgtctcatttcctattcagagagtaaagtggctaatct 424  Q
    ||| | | ||| |||||||||||| || ||||||| |||||||    
T  22426887 agtgatgactcgtttcctattcagggactaaagtgactaatct 22426845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 282 - 422
Target Start/End: Original strand, 12106974 - 12107114
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaa 381  Q
    |||||||| |||| |||| ||||| |||| ||||||||| || | ||| |||||||||||||||| | |||||| ||||||||||| ||||| |||||||    
T  12106974 ggactaaagtgacgaacgcagtctacatttagggactaatttaattaacagagtctacattcagggattattttgcaatttatctgcattcaaggactaa 12107073  T
Q  382 agtaacgtctcatttcctattcagagagtaaagtggctaat 422  Q
    ||| ||| ||  ||||||||| ||||| ||||||| |||||    
T  12107074 agtgacgacttctttcctatttagagactaaagtgactaat 12107114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 269 - 355
Target Start/End: Original strand, 29585576 - 29585662
Alignment:
Q  269 agtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactatttt 355  Q
    |||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||| ||| | |||||||||||||| ||||||||    
T  29585576 agtctacattcagggactaaattgactaacaaagtctgcattcagggactaaattgaataacaaagtctacattcagggactatttt 29585662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 142 - 246
Target Start/End: Complemental strand, 37544072 - 37543968
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||||||||||||||  ||||||||| | || |||| |||||||||||||| |||||| |||| ||||  ||| ||||||||||||| |||    
T  37544072 aattagtcactttagtccctgaatatgaaagaagtcgccattttagtccctgaatgtagataaattgcaaaatagtcattgattgtagactttgttagtc 37543973  T
Q  242 aattt 246  Q
    |||||    
T  37543972 aattt 37543968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 309 - 384
Target Start/End: Complemental strand, 23625147 - 23625072
Alignment:
Q  309 ttcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||||||||||||| || ||||||| |||||||| ||||||||||||| ||| |||||||||||||||||||    
T  23625147 ttcagggactaaattgaccaacagagtctgcattcaggtactattttacaatctatttgtattcagggactaaagt 23625072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 239 - 366
Target Start/End: Original strand, 41358778 - 41358905
Alignment:
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtcta 338  Q
    ||||||||||| |||||||||| |||| | |||||||| ||   ||| ||| | || ||  ||||||||||||| |||||||||||| ||| ||||||||    
T  41358778 gtcaatttcagagactaaagtgactaacaaagtctacattcagagacaaaagtaacaaataaagtctgcattcatggactaaattgattaacagagtcta 41358877  T
Q  339 cattcaggaactattttacaatttatct 366  Q
    |||||||| |||||||| ||||||||||    
T  41358878 cattcagggactattttgcaatttatct 41358905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 402
Target Start/End: Complemental strand, 10289481 - 10289214
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||| ||||| ||||  |||  ||||||||||| | | ||| |||| ||||||||||||||||||| |||||||||||||| |  |    
T  10289481 ggggaattagtcactttaatccctaaatggaaaatgagtagtcactt-agttcctaaatgcagagaaattgtaaaacagttcctgaatgtagactctagt 10289383  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||| | || |||||||| ||||   ||| | || || | ||||||||||| |||   ||||| ||||||  || |||||||||||| ||||| |    
T  10289382 ggtcaattttaagggctaaagtgactaacgaagtttgcattcaaagactaaattgattaa--gagtctacattca-agattaaattgactaagagagttt 10289286  T
Q  338 acattc-------aggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctatt 402  Q
     |||||       |  |||||||||||||||||||| ||||||| ||||||| ||||| ||| ||| |||||    
T  10289285 gcattcaaattaaataaactattttacaatttatctatattcagagactaaaataacgactccttttctatt 10289214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 12107119 - 12107020
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||| || |||  ||||||||| ||||||||| ||| |||||| ||| |||||| |||| | |||||||||||||||| ||||    
T  12107119 ggggaattagtcactttagtctctaaataggaaagaagtcgtcactttagtccttgaatgcagataaattgcaaaataatccctgaatgtagactctgtt 12107020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 12106970 - 12106867
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggc 418  Q
    |||||||| || ||||||||||| |||| ||| |||| |||||| |||| |||||||||||||||| ||  ||||||||| |||||| || ||||||| |    
T  12106970 aaattgaccaacagagtctacatccagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgac 12106871  T
Q  419 taat 422  Q
    ||||    
T  12106870 taat 12106867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 37494325 - 37494387
Alignment:
Q  153 ttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaaca 215  Q
    |||||||||||||  |||| |||||||||||||| |||||||||| |||||||||||||||||    
T  37494325 ttagtccctgaataggaaataagtagtcactttagtccctgaatgcagagaaattgtaaaaca 37494387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 23976368 - 23976267
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||| | ||| |||||  ||| |||| |||| | |||||||||||| ||||||||||| ||||||||||||||| || |||| ||||    
T  23976368 attagtcactttagtcc-tcaataagaaatgagtcgtcattttagttcctgaatgtagataaattgtaaaatagtccctgaatgtag-ctctgttagtca 23976271  T
Q  243 attt 246  Q
    ||||    
T  23976270 attt 23976267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 25149517 - 25149414
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||||||||||  ||||  ||| |||||| || || ||||||| ||| ||| || |||| | || |||||||||||||||||| ||||    
T  25149517 attagtcactttagtccctgaataggaaatgagtcgtcactatagtctctgaatgcagataaactgcaaaataatctctgaatgtagactttgttagtca 25149418  T
Q  243 attt 246  Q
    ||||    
T  25149417 attt 25149414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 23976194 - 23976129
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||||||||||| |||||||||||||||| ||| |||| |||||| |||| ||||||| ||||||||    
T  23976194 aaattgactaacagagtctacattcagggactgttttgcaatttctctgcattcaggaactaaagt 23976129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 288 - 329
Target Start/End: Original strand, 37494422 - 37494463
Alignment:
Q  288 aattgactaacgaagtctgcattcagggactaaattgactaa 329  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  37494422 aattgactaatgaagtctgcattcagggactaaattgactaa 37494463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 169 - 246
Target Start/End: Complemental strand, 41358935 - 41358858
Alignment:
Q  169 aaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    |||||||| |||  |||||||| |||||||||| |||||| |||| |||||||||||||||||| ||||  |||||||    
T  41358935 aaagaagtcgtccttttaatccatgaatgtagataaattgcaaaatagtccctgaatgtagactctgttaatcaattt 41358858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 142 - 225
Target Start/End: Original strand, 21184298 - 21184381
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaat 225  Q
    ||||||||||||||||||||||||  ||||  ||| |||||| || |||| ||||| ||| |||||| |||| |||||||||||    
T  21184298 aattagtcactttagtccctgaataggaaatgagtcgtcactctagtccccgaatgcagataaattgcaaaatagtccctgaat 21184381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 22326509 - 22326446
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaa 382  Q
    |||||||| ||||||||||||||||| | ||||||||||||||| || | |||||| |||||||    
T  22326509 aaattgaccaatagagtctacattcaaggactattttacaatttctcagcattcagagactaaa 22326446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 22426847 - 22426949
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||||||||||  ||||  |||  |||||||| ||| ||||||  || |||||| |||| ||||||||||||||| || |||| ||||    
T  22426847 attagtcactttagtccctgaataggaaacgagtcatcactttagtccatgaatgc-gataaattgcaaaatagtccctgaatgtagtctctgttagtca 22426945  T
Q  243 attt 246  Q
    ||||    
T  22426946 attt 22426949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 22469711 - 22469608
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||  ||||| |||||  ||| ||||||||| ||| | |||| ||| ||||||||||| ||| || ||||||||| | |||| ||||    
T  22469711 attagtcactttagtctatgaataagaaatgagtcgtcactttagtccttaaatgcagataaattgtaaaatagttccagaatgtagattctgttagtca 22469612  T
Q  243 attt 246  Q
    ||||    
T  22469611 attt 22469608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 381
Target Start/End: Original strand, 10289374 - 10289436
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaa 381  Q
    |||||||| | ||||||||||||||||||||| ||||||||||| |||| ||| ||| |||||    
T  10289374 aaattgaccactagagtctacattcaggaactgttttacaatttctctgcatttaggaactaa 10289436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 18324046 - 18324100
Alignment:
Q  192 tgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    |||||| ||| ||||||||||| |||||||||||||||||||| || ||||||||    
T  18324046 tgaatgcagataaattgtaaaatagtccctgaatgtagactttattagtcaattt 18324100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 286 - 351
Target Start/End: Complemental strand, 31254072 - 31254007
Alignment:
Q  286 taaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    |||| |||||||| || ||| |||| |||||||||||||||||| ||||||| |||||||| ||||    
T  31254072 taaagtgactaacaaaatctacatttagggactaaattgactaacagagtctgcattcagggacta 31254007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 351
Target Start/End: Original strand, 29585574 - 29585626
Alignment:
Q  299 gaagtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    ||||||| ||||||||||||||||||||||| | ||||| |||||||| ||||    
T  29585574 gaagtctacattcagggactaaattgactaacaaagtctgcattcagggacta 29585626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 245 - 319
Target Start/End: Original strand, 29585584 - 29585658
Alignment:
Q  245 ttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggacta 319  Q
    ||||||||||||| || |||| | ||||| || ||  |||||||||||| |||| |||||| |||||||||||||    
T  29585584 ttcagggactaaattgactaacaaagtctgcattcagggactaaattgaataacaaagtctacattcagggacta 29585658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 208
Target Start/End: Complemental strand, 31250365 - 31250295
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattg 208  Q
    ||||||||| |||||||||  ||||||||  |||| || ||||||||||||| || |||| ||||||||||    
T  31250365 ggggaattaatcactttagctcctgaatggaaaaggagaagtcactttaatctctaaatgcagagaaattg 31250295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 25149341 - 25149276
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||| || |||||||||||||||| ||| |||| |||||| | || ||||||||| ||||||    
T  25149341 aaattgaccaacagagtctacattcagggactgttttgcaatttctttgcattcagggattaaagt 25149276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 405
Target Start/End: Complemental strand, 37494385 - 37494332
Alignment:
Q  352 ttttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcag 405  Q
    ||||||||||| |||| |||||||||||||||| ||  || |||||||||||||    
T  37494385 ttttacaatttctctgcattcagggactaaagtgactacttatttcctattcag 37494332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 307 - 351
Target Start/End: Complemental strand, 22426993 - 22426949
Alignment:
Q  307 cattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    ||||||||||| ||||||||||| |||| ||||||||||| ||||    
T  22426993 cattcagggaccaaattgactaaaagagactacattcagggacta 22426949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 173; Significance: 9e-93; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 138 - 429
Target Start/End: Complemental strand, 13536845 - 13536553
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| || ||||||  |||||||||| ||||||||||||||||||||||| | ||    
T  13536845 ggggaattagtcactttagtccttgaatgagaaaggagtagtcactttagtctctgaatacagagaaattgcaaaacagtccctgaatgtagactctatt 13536746  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactc-gaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtc 336  Q
    |||| |||||||||||||||||| |||| |||||||||| || | || ||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  13536745 ggtccatttcagggactaaagtgactaacagagtctacattcagggggctaaattgactaacggagtctgcattcagggactaaattgactaacagagtc 13536646  T
Q  337 tacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccctt 429  Q
    |||||||||| |||||||| ||||||||||| ||||||| | |||||| ||| ||| |||||||||||| || ||||||| ||||||||||||    
T  13536645 tacattcagggactattttgcaatttatctgcattcaggcattaaagtgacggctcctttcctattcagggactaaagtgactaatctccctt 13536553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 138 - 427
Target Start/End: Original strand, 19295276 - 19295565
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||||||| |||||  ||||| ||||||||||||| ||||||||||  ||||||||| |||||||||||| ||| ||| || ||||    
T  19295276 ggggaattagtcactttagtccttgaataggaaaggagtagtcactttagtccctgaatgctgagaaattgcaaaacagtccctaaatataggctatgtt 19295375  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
     |||||||||||||||||||||| | ||  ||||||||| ||  |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  19295376 agtcaatttcagggactaaagtgaccaacggagtctacattcagggactaaattgactaatgaagtctgcattcagggactaaattgactaacagagtct 19295475  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
     |||||||| ||||||||  |||||||||| |||||||||||||||||||| ||| ||| ||||||||||| ||||||| ||||||||||    
T  19295476 gcattcagggactattttgtaatttatctgcattcagggactaaagtaacgactccttttctattcagagactaaagtgactaatctccc 19295565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 138 - 425
Target Start/End: Complemental strand, 25089436 - 25089149
Alignment:
Q  138 ggggaattagtcactttagtccctgaatg-agaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgt 236  Q
    ||||||||||||||||||||||||||||| | || ||| ||||||||||| || ||||||| |||||||||| |||||||| ||||||| |||||| |||    
T  25089436 ggggaattagtcactttagtccctgaatggacaatgaa-tagtcactttagtcactgaatgcagagaaattgcaaaacagttcctgaatatagactatgt 25089338  T
Q  237 tggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtc 336  Q
    |||||||||||| ||||||||||| |||||  |||||||| ||  |||||||||||||||| | ||||||||||||  ||||||||||||||| ||||||    
T  25089337 tggtcaatttcatggactaaagtgactaatgaagtctacattcagggactaaattgactaatggagtctgcattcaatgactaaattgactaacagagtc 25089238  T
Q  337 tacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctc 425  Q
    |||||||||| |||||||| ||||||||||| |||||| |||||||||  || ||| | |||||||||  || ||||||| ||||||||    
T  25089237 tacattcagggactattttgcaatttatctgcattcagagactaaagtggcgactcctctcctattcatggactaaagtgactaatctc 25089149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 138 - 427
Target Start/End: Original strand, 10587882 - 10588155
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  10587882 ggggaattagtcactttagtccatgaatgagaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactatgtt 10587981  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    | ||||||||||||||||||||| ||||      ||          |||||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  10587982 gttcaatttcagggactaaagtgactaa------ct----------actaaattgactaacggagtctgcattcaaggactaaattgactaataaagtct 10588065  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||||||| | |||||||| ||||||||||| ||||| ||||| |||| ||  ||| |||||||||||| || ||||||| ||||||||||    
T  10588066 acattcatggactattttgcaatttatctgcattcatggacttaagtgacaactcctttcctattcagggactaaagtgactaatctccc 10588155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 138 - 422
Target Start/End: Original strand, 21222460 - 21222746
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||| |||||||| |||||||||||||  ||||||||||| | ||| |||||| |||||||||| |||||||||| |||| ||||||| ||||    
T  21222460 ggggaattagtaactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgtt 21222559  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
     |||||||||| ||| ||| ||| ||||  ||||||||| ||  |||||||||||||||||||||||||||||||| |||||| |||||||| | ||| |    
T  21222560 agtcaatttcaaggattaatgtgactaactgagtctacattcagggactaaattgactaacgaagtctgcattcagagactaagttgactaacatagtat 21222659  T
Q  338 acattcaggaactattttacaatttatctgt--attcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaat 422  Q
    ||||||||  |||||||| |||||||||| |  |||||||||||||||| |||  |  |||||||||||| ||  |||||| |||||    
T  21222660 acattcagagactattttgcaatttatctatacattcagggactaaagtgacgatttctttcctattcagggaccaaagtgactaat 21222746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 138 - 325
Target Start/End: Complemental strand, 26705312 - 26705125
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||||| ||||||||  |||  ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  26705312 ggggaattagtcactttagttcctgaatggaaaaagagtagtcactttagtccctgaatgtagagaaattgcaaaacagtccctgaatgtagacgttgtt 26705213  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattga 325  Q
    ||||||||||||||||||||||| ||||  |  |||||| ||  |||||||||||||||||| | |||  ||||||||||||||||||    
T  26705212 ggtcaatttcagggactaaagtgactaacgggttctacattcagggactaaattgactaacggattctatattcagggactaaattga 26705125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 138 - 427
Target Start/End: Original strand, 10672614 - 10672900
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||| | |||| |||||||||||||||  ||||||||||||| ||   ||||| | | ||||| |||||||||||||||||||||||| ||||    
T  10672614 ggggaattagtta-tttaatccctgaatgagaaatgagtagtcactttagtcttcgaatgcataaaaattataaaacagtccctgaatgtagactatgtt 10672712  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||| ||||||||| |||| |||| ||||   |||||||| ||  |||||||||||||||||||| | ||||||||| ||||||||||| ||| | | |||    
T  10672713 ggtaaatttcaggaactatagtgactaacgaagtctacattcagggactaaattgactaacgaaatatgcattcagagactaaattgattaaca-aatct 10672811  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    |||||||||||||||||| ||||||||||| |||||  ||||||| |||   ||||||||||||||||| | |||| || ||||||||||    
T  10672812 acattcaggaactattttgcaatttatctgcattcaaagactaaaataataactcatttcctattcagaaactaaa-tgactaatctccc 10672900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 176 - 427
Target Start/End: Complemental strand, 10862258 - 10862008
Alignment:
Q  176 tagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctac 275  Q
    |||| |||||| |||||||||| |||||||||| ||||||||  ||||||||||||||  ||||||||||||||||||||||||| | || ||||||||     
T  10862258 tagttactttagtccctgaatgcagagaaattgcaaaacagtagctgaatgtagactta-ttggtcaatttcagggactaaagtgacgaacagagtctat 10862160  T
Q  276 actcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagg 375  Q
    | ||  |||||||||||||||||| ||||||| |||||||| | |||||||||| |||||||||||||||| ||||  || ||||| || || |||||||    
T  10862159 attcagggactaaattgactaacggagtctgccttcagggattgaattgactaacagagtctacattcagggactacattgcaattaatttgcattcagg 10862060  T
Q  376 gactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||||||||| ||| ||| |||   ||||||||| |||| || ||||||||||    
T  10862059 gactaaagtgacgactccttttacattcagagactaaaatgactaatctccc 10862008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 13536560 - 13536663
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||||||||||  ||||| ||  ||||||||||| |||||||| ||| |||||| |||| |||||||||||||||||| |||| ||||    
T  13536560 attagtcactttagtccctgaataggaaaggagccgtcactttaatgcctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttagtca 13536659  T
Q  243 attt 246  Q
    ||||    
T  13536660 attt 13536663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 10588150 - 10588047
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||||||||||  ||||| ||| ||||||| | ||| |||||| ||| |||||| |||| ||||| |||||||||||||| || ||||    
T  10588150 attagtcactttagtccctgaataggaaaggagttgtcacttaagtccatgaatgcagataaattgcaaaatagtccatgaatgtagactttattagtca 10588051  T
Q  243 attt 246  Q
    ||||    
T  10588050 attt 10588047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 25089152 - 25089255
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||| |||||  || || ||| | ||||||| || ||||||| ||| |||||| |||| |||||||||||||||||| |||| ||||    
T  25089152 attagtcactttagtccatgaataggagaggagtcgccactttagtctctgaatgcagataaattgcaaaatagtccctgaatgtagactctgttagtca 25089251  T
Q  243 attt 246  Q
    ||||    
T  25089252 attt 25089255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 143 - 237
Target Start/End: Original strand, 28752242 - 28752336
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||| ||||  |||||||||  ||||||||| | |||||||| ||| |||||| |||| ||||| |||||||||||| ||||    
T  28752242 attagtcactttagtccttgaacaagaaagaagatgtcactttagtacctgaatgcagataaattgcaaaatagtccatgaatgtagactctgtt 28752336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 21222747 - 21222644
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatg--tagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    ||||||||||||| ||||||||||  ||||||| | ||||||||| ||||||||||  |||| |||||| |||| |||| ||||||||| ||| |||| |    
T  21222747 aattagtcactttggtccctgaataggaaagaaatcgtcactttagtccctgaatgtatagataaattgcaaaatagtctctgaatgtatactatgttag 21222648  T
Q  240 tcaa 243  Q
    ||||    
T  21222647 tcaa 21222644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 245 - 329
Target Start/End: Complemental strand, 26705173 - 26705089
Alignment:
Q  245 ttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaa 329  Q
    ||||||||||||| || ||||  || |||| | ||  |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  26705173 ttcagggactaaattgactaacggattctatattcagggactaaattgattaacgaaatctgcattcagggactaaattgactaa 26705089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 19295560 - 19295457
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||| ||||||   |||| ||| || |||||| |||||||||| ||| |||||  |||| |||||||||||| ||||| |||| ||||    
T  19295560 attagtcactttagtctctgaatagaaaaggagtcgttactttagtccctgaatgcagataaattacaaaatagtccctgaatgcagactctgttagtca 19295461  T
Q  243 attt 246  Q
    ||||    
T  19295460 attt 19295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 13536737 - 13536802
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||| ||| ||||||||||||||||||| ||| |||| |||||| ||||||||||| |||||||||    
T  13536737 aaatggaccaatagagtctacattcagggactgttttgcaatttctctgtattcagagactaaagt 13536802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 331 - 428
Target Start/End: Complemental strand, 28752333 - 28752236
Alignment:
Q  331 agagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccct 428  Q
    |||||||||||||| | |||||||| ||||||||||| ||||||| |||||||| || |||  |||| | ||||  || ||||||| |||||||||||    
T  28752333 agagtctacattcatggactattttgcaatttatctgcattcaggtactaaagtgacatcttctttcttgttcaaggactaaagtgactaatctccct 28752236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 373
Target Start/End: Original strand, 12651182 - 12651312
Alignment:
Q  242 aatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacat 341  Q
    ||||| || |||||||||| |||| | ||||||||   ||| |||||||||||||||  |||| |||||||||||| |||||||||||  ||||||| ||    
T  12651182 aattttagagactaaagtgactaacaaagtctacatcagag-actaaattgactaacagagtcggcattcagggaccaaattgactaacggagtctatat 12651280  T
Q  342 tcaggaactattttacaatttatctgtattca 373  Q
    |||   | |||||  ||||||||||| |||||    
T  12651281 tcaaagattatttagcaatttatctgcattca 12651312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 245
Target Start/End: Original strand, 10862013 - 10862115
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||| ||||||| |||||||  |||| ||| ||||||||| |||||||||| | |  ||||| ||   |||||||||||||||||| |||| ||||    
T  10862013 attagtcattttagtctctgaatgtaaaaggagtcgtcactttagtccctgaatgcaaattaattgcaatgtagtccctgaatgtagactctgttagtca 10862112  T
Q  243 att 245  Q
    |||    
T  10862113 att 10862115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 287 - 384
Target Start/End: Complemental strand, 19780611 - 19780514
Alignment:
Q  287 aaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||||||||||| ||||| || ||||||||| |||||||||||||| | ||| |||| |   |||||||| |||||||||| || ||||  ||||||||    
T  19780611 aaattgactaatgaagtttgtattcagggattaaattgactaataaaatcttcattgatagactattttgcaatttatctatactcagttactaaagt 19780514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 10862189 - 10862256
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaac 387  Q
    |||||||| |||| |||||||||||||  ||| |||| |||||| |||| |||||||||||||||||||    
T  10862189 aaattgaccaata-agtctacattcagctactgttttgcaatttctctgcattcagggactaaagtaac 10862256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 384
Target Start/End: Complemental strand, 10587976 - 10587925
Alignment:
Q  333 agtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||||||||| ||| |||| |||||| |||| ||||||||||||||||    
T  10587976 agtctacattcagggactgttttgcaatttctctgcattcagggactaaagt 10587925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 25089328 - 25089393
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||| || | |||||| ||||||||||| |||| |||||| |||| |||||| |||||||||    
T  25089328 aaattgaccaacatagtctatattcaggaactgttttgcaatttctctgcattcagtgactaaagt 25089393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 282 - 351
Target Start/End: Complemental strand, 26705200 - 26705131
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    |||||||| |||||||||   ||| |||||||||||||||||||||||  || |||| ||||||| ||||    
T  26705200 ggactaaagtgactaacgggttctacattcagggactaaattgactaacggattctatattcagggacta 26705131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 170; Significance: 6e-91; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 170; E-Value: 6e-91
Query Start/End: Original strand, 138 - 427
Target Start/End: Complemental strand, 50335725 - 50335436
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||| ||||    
T  50335725 ggggaattagtcactttagtcccagaatggaaaaaaagtagtcactttaatccctgaatgcagacaaattgcaaaacagtccctgaatgtagactctgtt 50335626  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||| |||||||||||||  ||   ||||||||| ||  ||||||||||||| |||| ||||||||||||||||||||||||||||| | |||||    
T  50335625 ggtcaattttagggactaaagtgattagcggagtctacattcagggactaaattgacgaacggagtctgcattcagggactaaattgactaacaaagtct 50335526  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||||| || ||||||| ||||||||||    
T  50335525 acattcatggactattttgcaatttatctgcattcagggactaaagtgacgactcatttcctattcagggattaaagtgactaatctccc 50335436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 139 - 405
Target Start/End: Complemental strand, 37608254 - 37607989
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    |||| |||||||||||||||| |||||| ||||| |||||||| |||| |||||||||| |||||||||| ||||||||||||||||||| |  | ||||    
T  37608254 gggagttagtcactttagtccttgaatgggaaaggagtagtcattttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaaact-gttg 37608156  T
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtcta 338  Q
    ||||||||||||||| |||||| ||||  ||||||||| || ||||||||||||||||||  |||||||||||| |||||||||||||||| ||||||||    
T  37608155 gtcaatttcagggaccaaagtgactaacggagtctacattcaaggactaaattgactaacagagtctgcattcaaggactaaattgactaacagagtcta 37608056  T
Q  339 cattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcag 405  Q
    |||||| | |||||||| |||||||| || |||||||||||||| | ||   |||||||||||||||    
T  37608055 cattcaaggactattttgcaatttatatgcattcagggactaaaatgacaattcatttcctattcag 37607989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 138 - 402
Target Start/End: Complemental strand, 13735728 - 13735465
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||| ||||||||||||||||  | |||| ||||| |||||||| |||| || ||||||| | |||||||| ||||||||||||||||||||||| ||||    
T  13735728 ggggtattagtcactttagtca-taaatgggaaaggagtagtca-tttagtctctgaatgcaaagaaattgcaaaacagtccctgaatgtagactctgtt 13735631  T
Q  238 gg-tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtc 336  Q
     | ||||||||||||||||||||| ||||  ||||||||| |    ||||||||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  13735630 tgatcaatttcagggactaaagtgactaacggagtctacatttattgactaaattgactaacggagtctgcattcagagactaaattgactaacagagtc 13735531  T
Q  337 tacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctatt 402  Q
    ||||||  || ||||||||  |||||||||| |||||||||||||||| ||| ||  |||||||||    
T  13735530 tacattgtgggactattttgtaatttatctgcattcagggactaaagtgacgacttctttcctatt 13735465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 142 - 416
Target Start/End: Original strand, 8097714 - 8097988
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||||||| ||||||||||||  ||||| ||||||| |  || |||| |||||||||| ||||||||| || ||| |||||| ||||||||    
T  8097714 aattagtcactttagtctctgaatgagaaattagtagccactttagtttctaaatgcagagaaattgcaaaacagtctctaaatatagactatgttggtc 8097813  T
Q  242 aatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacat 341  Q
    ||||| | |||||||| || |||| |||||||||| ||  | |||||||||||||| | ||| || ||||| |||||||||||||||| ||| |||| ||    
T  8097814 aattttaaggactaaaatgactaacagagtctacattcaggaactaaattgactaatggagtatgtattcaaggactaaattgactaacagaatctatat 8097913  T
Q  342 tcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    ||| | ||||||||   ||||||||| |||||||||||||||| |   ||||||||||||| || || |||||||    
T  8097914 tcatggactattttgtgatttatctgcattcagggactaaagtgaaaactcatttcctatttagggactaaagtg 8097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 139 - 382
Target Start/End: Complemental strand, 42847301 - 42847065
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    |||||||||||||||||||| ||| ||  |||| |||||||||||||| |||||||||| |||||||||| |||||| ||| |||||||||||||||||     
T  42847301 gggaattagtcactttagtctctggataggaaaaaagtagtcactttattccctgaatgcagagaaattgcaaaacaatccttgaatgtagactttgtta 42847202  T
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgacta--atagagtc 336  Q
    |||| ||||        || || |||| |||||||||| |   |||||||||||||||||| ||| |||||||||  |||||||||||||  ||| | ||    
T  42847201 gtcagtttc--------aattgactaacagagtctacatttatggactaaattgactaacg-agtttgcattcagatactaaattgactatcatataatc 42847111  T
Q  337 tacattcaggaactattttacaatttatctgtattcagggactaaa 382  Q
    ||||||||   | |||||| ||||||||||| ||| | ||||||||    
T  42847110 tacattcaaagattatttttcaatttatctgcatttatggactaaa 42847065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 151 - 265
Target Start/End: Complemental strand, 11633401 - 11633287
Alignment:
Q  151 ctttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagg 250  Q
    |||| |||||||||||  |||  |||||||| |||| | ||||||||||||||||||||| |||||||||| |||| ||||| | ||||||||||||| |    
T  11633401 cttttgtccctgaatggaaaatgagtagtcattttagttcctgaatgtagagaaattgtataacagtccctaaatgcagactctattggtcaatttcaag 11633302  T
Q  251 gactaaagtggctaa 265  Q
    |||||||||| ||||    
T  11633301 gactaaagtgactaa 11633287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 50335441 - 50335544
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||| |||||||||  ||||  ||| ||||||||| |||||||||| ||| |||||| |||| ||||| ||||||||||||||||| ||||    
T  50335441 attagtcactttaatccctgaataggaaatgagtcgtcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactttgttagtca 50335540  T
Q  243 attt 246  Q
    ||||    
T  50335541 attt 50335544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 248
Target Start/End: Original strand, 32373981 - 32374090
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||| ||||||||||||||  |||||| |||||||||||| |||||| ||| | |||| ||| |||||||| | |||||||||||| ||||    
T  32373981 ggggaattagtcattttagtccctgaataggaaaga-gtagtcactttagtccctggatgcatagaatttgcaaaacagttcttgaatgtagactgtgtt 32374079  T
Q  238 ggtcaatttca 248  Q
     ||||||||||    
T  32374080 agtcaatttca 32374090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 309 - 428
Target Start/End: Complemental strand, 11633307 - 11633188
Alignment:
Q  309 ttcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagaga 408  Q
    |||| |||||||| ||||||| | | |||||||||| ||||||||||||||||||||||  |||| | || ||||| ||| ||  |||||||||||  ||    
T  11633307 ttcaaggactaaagtgactaacataatctacattcatgaactattttacaatttatctgctttcaagaaccaaagtgacgacttctttcctattcatgga 11633208  T
Q  409 gtaaagtggctaatctccct 428  Q
     ||||||| |||||||||||    
T  11633207 ttaaagtgactaatctccct 11633188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 269 - 384
Target Start/End: Original strand, 32374092 - 32374200
Alignment:
Q  269 agtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgt 368  Q
    |||||||| ||  |||||||||||||||||  ||| |||||||||||||||||||||||||       |||||||| | |||||||| |||||||| ||     
T  32374092 agtctacattcagggactaaattgactaacagagtttgcattcagggactaaattgactaa-------tacattcatggactattttgcaatttatttgc 32374184  T
Q  369 attcagggactaaagt 384  Q
    ||| ||||||||||||    
T  32374185 atttagggactaaagt 32374200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 50335617 - 50335682
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||| || |||||||||||||||| ||| |||| |||||| |||| ||||||||| ||||||    
T  50335617 aaattgaccaacagagtctacattcagggactgttttgcaatttgtctgcattcagggattaaagt 50335682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 37607982 - 37608075
Alignment:
Q  153 ttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    |||||||||||||  ||||  | | |||| |||| |||||||||| | | |||||| |||| ||||| |||||||||||| |||| ||||||||    
T  37607982 ttagtccctgaataggaaatgaattgtcattttagtccctgaatgcatataaattgcaaaatagtccttgaatgtagactctgttagtcaattt 37608075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 164; Significance: 2e-87; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 138 - 405
Target Start/End: Complemental strand, 27508860 - 27508593
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||| ||||||||||  |||| ||||||||||||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  27508860 ggggaattagtcactttaatccctgaatggaaaaggagtagtcactttagtccctgaacgtagagaaattgcaaaacagtccctgaatgtagactctgtt 27508761  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
     |||||||||| ||||||||||| ||||  ||||||||| ||  |||||||||||||||||  ||||||||||||||||||||||||||||| | |||||    
T  27508760 agtcaatttcatggactaaagtgactaacggagtctacattcagggactaaattgactaacagagtctgcattcagggactaaattgactaacatagtct 27508661  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcag 405  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||| | | ||||||||||||||||    
T  27508660 acattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcag 27508593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 145 - 427
Target Start/End: Original strand, 5080111 - 5080393
Alignment:
Q  145 tagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaat 244  Q
    |||||||||||||||||||||| |||| |||||||||||||| | |||||||| ||||||| || |||||||||  |||||||||||| |||| ||||||    
T  5080111 tagtcactttagtccctgaatgggaaaaaagtagtcactttagttcctgaatgcagagaaaatgcaaaacagtctttgaatgtagactctgttagtcaat 5080210  T
Q  245 ttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattca 344  Q
    |||| |||||||| ||  |||  ||||||||| ||  | |||||||||| ||||| ||||||||||||||||||||||||||||||| ||| ||||||||    
T  5080211 ttcaaggactaaaatgattaacggagtctacattcaggtactaaattgattaacggagtctgcattcagggactaaattgactaatatagtttacattca 5080310  T
Q  345 ggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    |  |||||||||||||||||||| |||||||||||||| ||||| ||  ||||||||||||||| ||||||| ||||| ||||    
T  5080311 gagactattttacaatttatctgcattcagggactaaaataacgacttctttcctattcagagactaaagtgactaatttccc 5080393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 138 - 427
Target Start/End: Original strand, 38760989 - 38761276
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||| ||||||||||||||| ||||||||||||||||||| | | ||||||||||||||||| |||||||||| || ||||||||| ||||    
T  38760989 ggggaattagtca-tttagtccctgaatgggaaagaagtagtcactttagttcgtgaatgtagagaaattgcaaaacagtcc-tggatgtagactctgtt 38761086  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    | |||||||  |||||||||||| |||| ||||||| || ||  |||||||||||||||||  |||||||||||  |||||||||||| ||| | |||||    
T  38761087 gatcaatttttgggactaaagtgactaacagagtctgcattcagggactaaattgactaacagagtctgcattcgaggactaaattgattaacaaagtct 38761186  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||||| | | |||||||||||||||| || |||||||  |||||||||    
T  38761187 acattcagggactattttgcaatttatctgcattcagggactaaagtgatgactcatttcctattcagggactaaagtgattaatctccc 38761276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 6e-63
Query Start/End: Original strand, 141 - 382
Target Start/End: Original strand, 14197457 - 14197698
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggt 240  Q
    |||||| |||||||||| ||| |||| |||| |||||||||||||| ||||| |||| |||||||||| |||||||||   ||||||||| | |||||||    
T  14197457 gaattaatcactttagttcctcaatgggaaaaaagtagtcactttagtccctaaatgcagagaaattgcaaaacagtcatcgaatgtagattctgttggt 14197556  T
Q  241 caatttcagggactaaagtggctaatagagtctacactcgag-gactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctac 339  Q
    |||||||||||||||||||| ||||  ||||||||| | ||| ||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||    
T  14197557 caatttcagggactaaagtgactaacggagtctaca-ttgagagactaaattgactaacggagtctgcattcagggattaaattgactaacagagtctac 14197655  T
Q  340 attcaggaactattttacaatttatctgtattcagggactaaa 382  Q
    ||||||| ||||| || ||||||||||| |||||||| |||||    
T  14197656 attcagggactatattgcaatttatctgcattcaggggctaaa 14197698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 140 - 426
Target Start/End: Complemental strand, 15000928 - 15000641
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    |||||||| |||||||||||||||||| ||||  ||||||||||||| ||  || ||| |||| ||||| |||||||||||| |||||||||||| ||||    
T  15000928 ggaattagccactttagtccctgaatgggaaatgagtagtcactttagtctttggatgcagaggaattgcaaaacagtccctaaatgtagactttattgg 15000829  T
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctac 339  Q
    ||||||||||||||||||||| | ||  ||||||||| |   ||||||||||||||| || ||||| |||||| |||||||| ||||||| | | |||||    
T  15000828 tcaatttcagggactaaagtgtccaacggagtctacattaagggactaaattgactatcggagtcttcattcaaggactaaactgactaacataatctac 15000729  T
Q  340 attcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagaga-gtaaagtggctaatctcc 426  Q
    |||| |  | |||||| ||||||||||| |||||||||||||||| ||   || |||||||||||| ||  ||||||| |||||||||    
T  15000728 attctgagaatattttgcaatttatctgcattcagggactaaagtgacaattcctttcctattcagggacctaaagtgactaatctcc 15000641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 176 - 384
Target Start/End: Original strand, 6441378 - 6441585
Alignment:
Q  176 tagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctac 275  Q
    |||||||| || |||||||||| | |||||||| ||||||||||||||||||||||| | || |||||||||| |||| |||||| ||||  ||||||||    
T  6441378 tagtcactatagtccctgaatgcaaagaaattgcaaaacagtccctgaatgtagactct-ttagtcaatttcaaggacaaaagtgactaacggagtctac 6441476  T
Q  276 actcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagg 375  Q
    | |    ||||||||||||||||  ||||||||||||||||||||||||||||| | |||||||||||||| | |||||| ||||||||||| ||||||     
T  6441477 atttagagactaaattgactaacagagtctgcattcagggactaaattgactaacaaagtctacattcagggattattttgcaatttatctgcattcaga 6441576  T
Q  376 gactaaagt 384  Q
    |||||||||    
T  6441577 gactaaagt 6441585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 142 - 354
Target Start/End: Original strand, 45012848 - 45013059
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||| || ||||||| | |||||||| |||||| || |  |||||||||| | ||||||    
T  45012848 aattagtcactttggtccctgaatgggaaaggagtagtcactttagtctctgaatgcaaagaaattgcaaaacaatctca-aatgtagactctattggtc 45012946  T
Q  242 aatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacat 341  Q
    |||||||||||||||||||  ||   ||||||||| ||   || |||||||||||||| ||||||||||||||||||||||||||||| | | |||||||    
T  45012947 aatttcagggactaaagtgattagcggagtctacattcagagattaaattgactaacggagtctgcattcagggactaaattgactaacaaactctacat 45013046  T
Q  342 tcaggaactattt 354  Q
    |||||||||||||    
T  45013047 tcaggaactattt 45013059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 140 - 298
Target Start/End: Complemental strand, 36151098 - 36150940
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    ||||||||||||||||||||||| |||  |||  ||||||||||||||||| ||||||| ||||||||| |||||||| |||||||||||||||||||||    
T  36151098 ggaattagtcactttagtccctggatggaaaatgagtagtcactttaatccttgaatgttgagaaattgcaaaacagtacctgaatgtagactttgttgg 36150999  T
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaac 298  Q
    ||||||||| |||||||| || ||||  |||| |||| ||   ||||||||||||||||    
T  36150998 tcaatttcaaggactaaaatgactaacggagtttacattcagagactaaattgactaac 36150940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 138 - 367
Target Start/End: Complemental strand, 3404740 - 3404513
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||| ||||||||||||||| ||| ||||  |||  |||||||||||||  ||||||||| |||||||||| |||| ||||| ||||||||||||  |||    
T  3404740 ggggtattagtcactttagttcctaaatggaaaaagagtagtcactttaggccctgaatgcagagaaattgcaaaatagtccttgaatgtagactcggtt 3404641  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
     |||||| ||||  ||||||||| ||||| ||  ||||||||  |||||||||||||||||  || ||||||| |||||||||||||||||| ||||| |    
T  3404640 agtcaatatcagaaactaaagtgactaatgga-actacactcagggactaaattgactaacagag-ctgcatttagggactaaattgactaacagagtgt 3404543  T
Q  338 acattcaggaactattttacaatttatctg 367  Q
    ||||||| | |||| ||| |||||||||||    
T  3404542 acattcatggactactttgcaatttatctg 3404513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 140 - 255
Target Start/End: Original strand, 15272320 - 15272435
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    ||||| |||||||||||||| |||||||||||  |||||||| |||| |||||||||| |||||||||| |||| |||||||||||||||||||||||||    
T  15272320 ggaatgagtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttgg 15272419  T
Q  240 tcaatttcagggacta 255  Q
    ||||||||||||||||    
T  15272420 tcaatttcagggacta 15272435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 286 - 427
Target Start/End: Original strand, 43257375 - 43257516
Alignment:
Q  286 taaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagta 385  Q
    |||||||||||||||||||| |||| |||||||||||||||||| |||||||| ||||| | | |||||| ||||||||||| ||||||||| ||||||     
T  43257375 taaattgactaacgaagtctacatttagggactaaattgactaacagagtctatattcaaggattattttgcaatttatctgcattcagggattaaagtg 43257474  T
Q  386 acgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||| ||||||| |||||||| || | ||||| || |||||||    
T  43257475 acgactcattttctattcagggattgaagtgactgatctccc 43257516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 298
Target Start/End: Original strand, 43257261 - 43257419
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    |||||||||||||||| ||||||||||  |||  | ||||||| ||| |||||||||| | ||||||||||||| |||| ||||||||||| ||||||||    
T  43257261 ggaattagtcactttaatccctgaatggaaaatgaatagtcaccttagtccctgaatgcatagaaattgtaaaagagtctctgaatgtagattttgttgg 43257360  T
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaac 298  Q
    ||||||||||||| |||| || ||||   |||||||| |   |||||||||||||||||    
T  43257361 tcaatttcagggagtaaattgactaacgaagtctacatttagggactaaattgactaac 43257419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 174 - 405
Target Start/End: Original strand, 37787718 - 37787945
Alignment:
Q  174 agtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtct 273  Q
    ||||||| ||||| |||||||||  ||  | |||||||||||||| |||||| || | |||||| |||||||| |  || |||| || |||   ||||||    
T  37787718 agtagtccctttagtccctgaatacaggaagattgtaaaacagtctctgaatataaattttgtttgtcaattttaaagattaaaatgactagcggagtct 37787817  T
Q  274 acactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattca 373  Q
    ||| || | ||||||||||||||||  ||| ||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||   || |||||    
T  37787818 acattcaacgactaaattgactaacagagtatgcattcagggactaaattgactaacaaagtctacattca-gaactattttgcaattt---tgcattca 37787913  T
Q  374 gggactaaagtaacgtctcatttcctattcag 405  Q
    |||||||||||  ||  ||||||| |||||||    
T  37787914 gggactaaagtggcgattcatttcttattcag 37787945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 281 - 429
Target Start/End: Complemental strand, 36150989 - 36150841
Alignment:
Q  281 aggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggacta 380  Q
    ||||||||| ||||||||| ||| | ||||||| ||||||||||||||| |||||||||||  ||| | |||||| ||||||||||| ||||| ||| |     
T  36150989 aggactaaaatgactaacggagtttacattcagagactaaattgactaacagagtctacatctagggattattttgcaatttatctgcattcatggattt 36150890  T
Q  381 aagtaacgtctcatttcctattcagagagtaaagtggctaatctccctt 429  Q
    |||| ||| ||||||||||||| |  || ||||||| ||||||||||||    
T  36150889 aagtgacgactcatttcctatttatggactaaagtgactaatctccctt 36150841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 38761271 - 38761168
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||| ||||||||||||||||||  ||||  |||  |||||||| |||||||||| ||| |||||| |||| |||||||||||||||||||||||  |||    
T  38761271 attaatcactttagtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactttgttaatca 38761172  T
Q  243 attt 246  Q
    ||||    
T  38761171 attt 38761168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 5080394 - 5080285
Alignment:
Q  137 gggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgt 236  Q
    |||| ||||||||||||||||| ||||||  ||||||||| || | |||| |||||||||| ||| ||||||||||| |||| ||||||||| ||| | |    
T  5080394 ggggaaattagtcactttagtctctgaataggaaagaagtcgttattttagtccctgaatgcagataaattgtaaaatagtctctgaatgtaaactatat 5080295  T
Q  237 tggtcaattt 246  Q
    | ||||||||    
T  5080294 tagtcaattt 5080285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 27508577 - 27508679
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||| |||||||||||  ||||  |||  |||||||| |||||||||| ||| |||||| |||| |||||||||||||||||| |||| ||||    
T  27508577 attagtcactt-agtccctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtca 27508675  T
Q  243 attt 246  Q
    ||||    
T  27508676 attt 27508679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 6441590 - 6441520
Alignment:
Q  176 tagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    ||||||||||| || ||||||| ||| |||||| |||| | ||||||||||||||||||||| ||||||||    
T  6441590 tagtcactttagtctctgaatgcagataaattgcaaaataatccctgaatgtagactttgttagtcaattt 6441520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 15272426 - 15272363
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaa 382  Q
    |||||||| || | |||||||||||||| |||||||| |||||| |||| ||||||||||||||    
T  15272426 aaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaa 15272363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 27508752 - 27508855
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggc 418  Q
    ||||||||||| |||||||||||||||| ||| |||| |||||| |||   ||||||||||||||| ||  ||| ||| | |||||| || ||||||| |    
T  27508752 aaattgactaacagagtctacattcagggactgttttgcaatttctctacgttcagggactaaagtgactactccttttccattcagggattaaagtgac 27508851  T
Q  419 taat 422  Q
    ||||    
T  27508852 taat 27508855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 43257476 - 43257408
Alignment:
Q  178 gtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    |||||||||||||||||||| ||| |||||| |||| | ||| ||||| |||||| |||| ||||||||    
T  43257476 gtcactttaatccctgaatgcagataaattgcaaaataatccttgaatatagactctgttagtcaattt 43257408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 321 - 384
Target Start/End: Original strand, 3404634 - 3404697
Alignment:
Q  321 attgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||||  ||||||||||||| | |||||||| |||||| |||| |||||||| |||||||    
T  3404634 attgactaaccgagtctacattcaaggactattttgcaatttctctgcattcagggcctaaagt 3404697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 14197710 - 14197635
Alignment:
Q  171 agaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    |||||| |||| ||||  ||||||||| ||| |||||| || | |||||||||||||||||| |||| ||||||||    
T  14197710 agaagtcgtcattttagcccctgaatgcagataaattgcaatatagtccctgaatgtagactctgttagtcaattt 14197635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 15000822 - 15000925
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggc 418  Q
    |||||||| |||| |||||||||| ||| ||| |||| |||||  |||| || ||  ||||||||| ||  ||||||||| |||||| || |||||||||    
T  15000822 aaattgaccaataaagtctacatttagggactgttttgcaattcctctgcatccaaagactaaagtgactactcatttcccattcagggactaaagtggc 15000921  T
Q  419 taat 422  Q
    ||||    
T  15000922 taat 15000925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 36150848 - 36150951
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||| | |||  ||||  ||| ||||||| ||||| |||||| ||| |||||| |||| | |||||  ||||||||| |||| ||||    
T  36150848 attagtcactttagtccataaataggaaatgagtcgtcacttaaatccatgaatgcagataaattgcaaaataatccctagatgtagactctgttagtca 36150947  T
Q  243 attt 246  Q
    ||||    
T  36150948 attt 36150951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 380
Target Start/End: Complemental strand, 6441447 - 6441387
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggacta 380  Q
    ||||||||||| |||||||||||||||| ||| |||| |||||| | || ||||||||||||    
T  6441447 aaattgactaa-agagtctacattcagggactgttttgcaatttctttgcattcagggacta 6441387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 149; Significance: 2e-78; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 138 - 426
Target Start/End: Original strand, 30470813 - 30471101
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||| ||| ||||||| |||||| | ||||  ||||||||||||| | |||||||| |||||||||| |||||| ||||| |||||||  ||||||    
T  30470813 ggggaattggtctctttagttcctgaacgggaaatgagtagtcactttagttcctgaatgcagagaaattgcaaaacactccctaaatgtagcatttgtt 30470912  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||||||||||||||| |||| |||||||||| || | ||||||||||| ||||| ||||||||||||||||||||||||| ||| | |||||    
T  30470913 ggtcaatttcagggactaaagtgactaacagagtctacattcaatgactaaattgattaacggagtctgcattcagggactaaattgattaacatagtct 30471012  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctcc 426  Q
    ||||||||| |||||||||||||||||||  ||||||| |||||||| ||| ||| ||| ||||||||||| ||||||| |||||||||    
T  30471013 acattcagggactattttacaatttatctacattcaggaactaaagtgacgactctttttctattcagagactaaagtgactaatctcc 30471101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 142 - 384
Target Start/End: Original strand, 18830574 - 18830815
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||||||||||||||||||||  ||||||||||||| ||| || ||| ||| ||||||  |||||||||||||||||||| | ||||||||    
T  18830574 aattagtcactttagtccctgaatgagaaatgagtagtcactttagtcc-tggatgcagataaattgctaaacagtccctgaatgtagattctgttggtc 18830672  T
Q  242 aatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacat 341  Q
    ||||||||||||||||||| ||||| ||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||||    
T  18830673 aatttcagggactaaagtgactaatggagtctacattcagggactaaattgactaacgaagtctgcattcagggactaaatggactaacagaatctacat 18830772  T
Q  342 tcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||| | |||||||| ||||||||||| ||||||||||||||||    
T  18830773 tcaaggactattttgcaatttatctgcattcagggactaaagt 18830815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 139 - 423
Target Start/End: Complemental strand, 5448479 - 5448195
Alignment:
Q  139 gggaattagtcactttagtccctgaat-gagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||| ||| ||||| || |||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||||||| ||| ||||    
T  5448479 gggaattagtcactttactccgtgaatcgaaaaagaa-tagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtaaactctgtt 5448381  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||||| ||||||||| |||||  |||||| | ||  ||||||||||||| |||| ||||||||| ||||||||||||||||||| ||||| |    
T  5448380 ggtcaatttcaggaactaaagtgactaatgaagtctatattcagggactaaattgaccaacggagtctgcatccagggactaaattgactaacagagttt 5448281  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatc 423  Q
    |||||||||  ||||||||||||||||||| |||||||||||||| | | | ||| |||||||||||| || ||||| | ||||||    
T  5448280 acattcaggggctattttacaatttatctgcattcagggactaaaatgatgactcctttcctattcagggaataaagggactaatc 5448195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 140 - 428
Target Start/End: Original strand, 2634021 - 2634309
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||  | | |||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  2634021 ggaattagtcactttagtccatgaatgagaaaagagtagtcactttagccgccgaatgctgagaaattgcaaaacagtccctgaatgtagactttattgg 2634120  T
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctac 339  Q
    |||||||||| ||||||||||  ||| | |||||||| ||  ||||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||    
T  2634121 tcaatttcagcgactaaagtgattaacaaagtctacattcagggactaaattgacgaacagagtctgcattcagggactaaattgactaacagagtctac 2634220  T
Q  340 attcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccct 428  Q
    ||||||  |||||||  ||||||||||  |||||| ||||||||| | | |||||||| |||| |  || ||||||| |||||||||||    
T  2634221 attcagagactatttagcaatttatctacattcagtgactaaagtgaagactcatttcttatttaaggactaaagtgactaatctccct 2634309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 138 - 364
Target Start/End: Original strand, 5324678 - 5324904
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||| |||||  | ||| ||| |||||||||| |||||||||  |||||||||||| ||||    
T  5324678 ggggagttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgtt 5324777  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||||||||||||||| | || ||||| |||| || ||||||||||||||||||  |||||||||||| | |||||||||||||| |||||||    
T  5324778 ggtcaatttcagggactaaagtgacgaacagagtttacattcaaggactaaattgactaacagagtctgcattcatgaactaaattgactaacagagtct 5324877  T
Q  338 acattcaggaactattttacaatttat 364  Q
     || |||| ||||||||||||||||||    
T  5324878 gcaatcagaaactattttacaatttat 5324904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 138 - 344
Target Start/End: Original strand, 37694895 - 37695101
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||| |||| |||||| | ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| | ||||    
T  37694895 ggggaattagtcactttagtcactgagtgagaatggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagattgtgtt 37694994  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||| || |||||||||| ||||||||||||| | ||  ||||||||||||||||||  ||||||||| ||||| |||||||||||| |||||||    
T  37694995 ggtcaatttaagtgactaaagtgactaatagagtctatattcagggactaaattgactaacggggtctgcatttagggattaaattgactaacagagtct 37695094  T
Q  338 acattca 344  Q
     ||||||    
T  37695095 gcattca 37695101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 139 - 424
Target Start/End: Complemental strand, 2063429 - 2063144
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    ||||||||||||||||||||| |||||| ||||  ||||||||||||||||| ||| || |||||||||| ||| ||||||||||||||||||| |||||    
T  2063429 gggaattagtcactttagtccttgaatgggaaatgagtagtcactttaatccttgattgcagagaaattgcaaagcagtccctgaatgtagactctgttg 2063330  T
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtcta 338  Q
    |||||||| |  |||||||||| |||| | | |||||| |   |||||||||||||||||| ||| ||||||||| ||||||||||||||| | ||| ||    
T  2063329 gtcaattttaaagactaaagtgactaacaaattctacatttagggactaaattgactaacggagtttgcattcagagactaaattgactaacatagttta 2063230  T
Q  339 cattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatct 424  Q
    ||||||   ||||||||| |||||||||| ||||| | || |||||  || |||||||||| ||||| || ||||||| |||||||    
T  2063229 cattcaatgactattttataatttatctgcattcaagaaccaaagtgccgactcatttcctcttcagggactaaagtgactaatct 2063144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 138 - 338
Target Start/End: Original strand, 10757565 - 10757765
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||| |||||| |||||||||| || ||||||||| ||||    
T  10757565 ggggaattagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgtt 10757664  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||| ||||||| || ||||  ||| |||||||||| ||  |||||||||||||||||| |||||||||||||||||||||||  |||| |||||||    
T  10757665 ggtcaatctcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattcgctaacagagtct 10757764  T
Q  338 a 338  Q
    |    
T  10757765 a 10757765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 138 - 338
Target Start/End: Original strand, 10970736 - 10970936
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| |||||||||||||| |||||| |||||||||| || ||||||||| ||||    
T  10970736 ggggaattagtcactttagtccctgaatgagaaatgagtagtcactttagtccctgaatgtagataaattgcaaaacagtccatggatgtagactatgtt 10970835  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||| ||||||| || ||||  ||| |||||||||| ||  |||||||||||||||||| |||||||||||||||||||||||  |||| |||||||    
T  10970836 ggtcaatctcagggattatagtgattaacagagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattcgctaacagagtct 10970935  T
Q  338 a 338  Q
    |    
T  10970936 a 10970936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 176 - 427
Target Start/End: Original strand, 10380633 - 10380879
Alignment:
Q  176 tagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctac 275  Q
    ||||||||||| |  ||||||| |||||||||| |||||||||     ||||| ||||||||||||||||||||||||||||||| ||||  ||||||||    
T  10380633 tagtcactttagtttctgaatgcagagaaattgcaaaacagtc-----atgtaaactttgttggtcaatttcagggactaaagtgactaactgagtctac 10380727  T
Q  276 actcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagg 375  Q
    | |   ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||  |||||||| ||||||||||| |||||||    
T  10380728 atttagggactaaattgactaacgaagtctgcattcagggattaaattgactaacagagtctacatttagagactattttgcaatttatctgaattcagg 10380827  T
Q  376 gactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    | ||||||| ||| || |||| |||||||  || ||||||| ||||||||||    
T  10380828 ggctaaagttacgacttattttctattcaaggactaaagtgactaatctccc 10380879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 142 - 402
Target Start/End: Complemental strand, 11822007 - 11821743
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtcc----ctgaatgtagactttgtt 237  Q
    ||||||| |||||||||| | |||| ||||  |||| | |||||| |||||||||| |||||||||| |||||| ||     |||||| |||||||||||    
T  11822007 aattagttactttagtccttcaatgggaaatgagtacttactttagtccctgaatgcagagaaattgcaaaacaatcaatctctgaatttagactttgtt 11821908  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||||||||||||||| |||| |||||||||| ||   ||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||    
T  11821907 ggtcaatttcagggactaaagtgactaacagagtctacattcatagactaaattgactaacgaaatctgcattcagggactaaattaactaacagagtct 11821808  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctatt 402  Q
    |||||||   |||||||| ||||||||||||||| | |||||||||| ||| ||  |||||||||    
T  11821807 acattcaaagactattttgcaatttatctgtatttaaggactaaagtgacgacttctttcctatt 11821743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 141 - 384
Target Start/End: Original strand, 18836278 - 18836520
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggt 240  Q
    |||||||||| ||| ||||||||||||||||  ||||||||||||| |||||||||| ||| |||||  |||||||||||| |||||  ||  |||||||    
T  18836278 gaattagtcatttttgtccctgaatgagaaatgagtagtcactttagtccctgaatgcagataaattc-aaaacagtccctaaatgttaacgctgttggt 18836376  T
Q  241 caatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctaca 340  Q
    |||||| | ||||||||||| ||||| ||||||||| ||  ||||||||| |||||||| |||||||||||||||||||||| |||||| |||||||||     
T  18836377 caattttatggactaaagtgactaatggagtctacattcagggactaaat-gactaacggagtctgcattcagggactaaatggactaacagagtctacg 18836475  T
Q  341 ttcaggaacta-ttttacaatttatctgtattcagggactaaagt 384  Q
    |||||| | || |||| |||||| |||| ||||||||||||||||    
T  18836476 ttcagggattacttttgcaatttttctgcattcagggactaaagt 18836520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 143 - 384
Target Start/End: Complemental strand, 9826911 - 9826670
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||| ||||||| |||||  ||||||||||| | | | |||||| |||||||||| |||||||| | |||| ||||||| |||| ||||    
T  9826911 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 9826812  T
Q  243 atttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatt 342  Q
    |||||| ||| ||| ||| ||||  ||||||| | ||  ||| |||||||| |||||||||||||||||||  ||||| |||||||| | ||| ||||||    
T  9826811 atttcaaggattaatgtgactaactgagtctaaattcagggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 9826712  T
Q  343 caggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||| ||||||||| ||||||||||| ||||| ||||||||||    
T  9826711 cagaaactattttgcaatttatctgcattcatggactaaagt 9826670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 138 - 384
Target Start/End: Original strand, 2232367 - 2232611
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||||| ||| ||||| |||  |||||||| |||| |||||||||  |||||||||| |||||| ||||| |||||||| | ||||    
T  2232367 ggggaattagtcactttagttcctaaatgaaaaatgagtagtcaatttagtccctgaatagagagaaattgcaaaacaatccctcaatgtagattctgtt 2232466  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    |||||||||||||||||||||||  ||| | |||||||| ||  ||||||||||| |||||  ||||| ||  |||||| |||||||||||| | |||||    
T  2232467 ggtcaatttcagggactaaagtgattaa-aaagtctacattcagggactaaattggctaacagagtct-caaccagggattaaattgactaacatagtct 2232564  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||||| | | ||||||||||||||||| |  ||| ||||||||||||    
T  2232565 acattgaaggactattttacaatttatttacatttagggactaaagt 2232611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 138 - 319
Target Start/End: Original strand, 22017877 - 22018058
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||| |||||||||| |||||||||| ||||| ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||| | | ||||    
T  22017877 ggggaatcagtcactttaatccctgaatgggaaaggagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtatattctgtt 22017976  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggacta 319  Q
    ||||||||||| |||||||||||  |||  |||| |||| ||   |||||||| |||||||  ||||| |||||||||||||    
T  22017977 ggtcaatttcaaggactaaagtgattaacggagtatacattcagagactaaatagactaacatagtctacattcagggacta 22018058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 199 - 430
Target Start/End: Original strand, 47943504 - 47943735
Alignment:
Q  199 agagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaac 298  Q
    |||||||||  |||| ||||  |||||||||| ||||||||||||||| |||||||| ||||  ||| | |||||||| ||  ||| |||||||||||||    
T  47943504 agagaaattacaaaatagtcattgaatgtagattttgttggtcaattttagggactatagtgattaacatagtctacattcagggattaaattgactaac 47943603  T
Q  299 gaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcc 398  Q
    |    ||||||||| | ||||||||||||||   |||||||||||||| |||||||| ||||||||||| ||| | |||||||||| ||| |||||||||    
T  47943604 ggttcctgcattcaagaactaaattgactaaccaagtctacattcagggactattttgcaatttatctgcatttaaggactaaagtgacgactcatttcc 47943703  T
Q  399 tattcagagagtaaagtggctaatctcccttc 430  Q
    ||||||| || ||||  | |||||||||||||    
T  47943704 tattcagggactaaaacgactaatctcccttc 47943735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 138 - 312
Target Start/End: Original strand, 12140662 - 12140836
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||| ||| | ||||||||| |||| ||||||||||||| |||||| | |||||||| |||||||||||| ||| |||||||||||    
T  12140662 ggggaattagtcactttaatccttaaatgagaaataagtcgtcactttaatccttgaatgcaaagaaattgcaaaacagtccctaaatatagactttgtt 12140761  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattca 312  Q
      ||||||| |||||||||| || |||| | | |||||| || ||||||||||||||||||| ||||| ||||||    
T  12140762 aatcaattttagggactaaaatgactaacaaattctacattcaaggactaaattgactaacggagtctacattca 12140836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 141 - 425
Target Start/End: Complemental strand, 18500878 - 18500596
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggt 240  Q
    |||||||||||||| |||||||| ||| |||  |||||||| |||||| | ||  || ||||||||||||||||||| | ||||||||||   |||||||    
T  18500878 gaattagtcacttttgtccctga-tgaaaaatgagtagtcattttaattcttgggtgcagagaaattgtaaaacagttcttgaatgtagatactgttggt 18500780  T
Q  241 caatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctaca 340  Q
    ||||||||| ||||||||||  ||| |||||||| | ||  |||||||||||||||||  ||||| |||||||||| ||||||| |||||| ||| ||||    
T  18500779 caatttcagagactaaagtgattaacagagtctaaattcagggactaaattgactaacagagtctacattcagggattaaattggctaatatagtttaca 18500680  T
Q  341 ttcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctc 425  Q
    || |  || |||||| |||| ||| ||||||| | ||||||| | ||| ||| ||||||||| ||  | ||||||| ||||||||    
T  18500679 tttaaaaattatttttcaatctatttgtattctgagactaaaatgacgactc-tttcctattgaggcaataaagtgactaatctc 18500596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 251 - 425
Target Start/End: Original strand, 55382664 - 55382838
Alignment:
Q  251 gactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaact 350  Q
    |||||||||| ||||  |||||||||  |  |||||||||||||||||| | |||||||| |||||| ||||||||||| | |||||||||||||  |||    
T  55382664 gactaaagtgactaacggagtctacatccagggactaaattgactaacggaatctgcatttagggacaaaattgactaacaaagtctacattcagagact 55382763  T
Q  351 attttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctc 425  Q
    ||||| ||||||||||| ||||||||| |||||| ||| |||||||||||||||  || ||||||| ||||||||    
T  55382764 attttgcaatttatctgcattcagggattaaagtgacgactcatttcctattcaaggactaaagtgactaatctc 55382838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 143 - 405
Target Start/End: Complemental strand, 30379017 - 30378759
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||| || |||  ||||  ||||||||||||| ||||| |||| |||||||||| |||  |||| ||||||| ||||||||   ||||    
T  30379017 attagtcactttagtctctaaataggaaatgagtagtcactttagtcccttaatgcagagaaattgcaaagaagtctctgaatgcagactttg---gtca 30378921  T
Q  243 atttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatt 342  Q
    |||||||  ||||||||| ||||  ||||||| | ||  ||||| |||||||||||  ||||||||||||| |||| |||||||||| ||||||| ||||    
T  30378920 atttcagacactaaagtgactaacggagtcta-attcagggactgaattgactaacagagtctgcattcagagactgaattgactaacagagtctgcatt 30378822  T
Q  343 caggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcag 405  Q
    |||  |||||||| |||||||| |  || ||||||||||||| | | ||| ||||||| ||||    
T  30378821 cagagactattttgcaatttatttacatccagggactaaagtgatgactcttttcctaatcag 30378759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 255 - 382
Target Start/End: Complemental strand, 3370132 - 3370005
Alignment:
Q  255 aaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattt 354  Q
    |||||| ||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |   |||||||    
T  3370132 aaagtgactaatagagtctacattaagagactaaattgactaacgaagtctgcattcagggactaaattgactaacagagtctacatttaatgactattt 3370033  T
Q  355 tacaatttatctgtattcagggactaaa 382  Q
    | ||||||||||| ||||||| ||||||    
T  3370032 tgcaatttatctggattcaggaactaaa 3370005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 142 - 260
Target Start/End: Original strand, 47463813 - 47463931
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||||||||||| ||| ||||  ||||||||||||| |||||||||| ||| |||||| |||||||||  |||||||||||| ||||| |     
T  47463813 aattagtcactttagtccctggatgggaaatgagtagtcactttagtccctgaatgcagataaattgcaaaacagtctttgaatgtagactctgttgata 47463912  T
Q  242 aatttcagggactaaagtg 260  Q
    |||||||||||||||||||    
T  47463913 aatttcagggactaaagtg 47463931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 281 - 429
Target Start/End: Original strand, 22017988 - 22018136
Alignment:
Q  281 aggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggacta 380  Q
    ||||||||| ||| ||||| ||| | ||||||| |||||||| |||||| | |||||||||||||| |||||||| ||||||||||| |||||| ||| |    
T  22017988 aggactaaagtgattaacggagtatacattcagagactaaatagactaacatagtctacattcagggactattttgcaatttatctgcattcagagacga 22018087  T
Q  381 aagtaacgtctcatttcctattcagagagtaaagtggctaatctccctt 429  Q
    || | ||| ||||||||||||| || || ||||||| ||||||||||||    
T  22018088 aaatgacgactcatttcctatttagggactaaagtgactaatctccctt 22018136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 150 - 345
Target Start/End: Original strand, 1387286 - 1387480
Alignment:
Q  150 actttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcag 249  Q
    ||||| |||| |||||||||||  |||||||| |||| ||| |||||| |||||||||  ||| |||||| |||||||| | |||||| |||||| | ||    
T  1387286 actttggtccatgaatgagaaaagagtagtcattttagtccatgaatgcagagaaattacaaagcagtccttgaatgtata-tttgttagtcaatattag 1387384  T
Q  250 ggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcag 345  Q
    ||||||||||| ||||   |||||||| ||  | ||||||||||||||||  || |||||||||| |||||| ||||||| | |||||||||||||    
T  1387385 ggactaaagtgactaacgaagtctacattccggaactaaattgactaacggggtttgcattcaggaactaaagtgactaacaaagtctacattcag 1387480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 8951129 - 8951247
Alignment:
Q  284 actaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaag 383  Q
    |||||| ||||||||||||||| |||| ||| |||||||||||||| | | ||||||||||||||||||||||| |||||||| |||||||| ||||| |    
T  8951129 actaaaatgactaacgaagtctacattaaggaactaaattgactaacaaaatctacattcaggaactattttaccatttatctatattcaggaactaatg 8951228  T
Q  384 taacgtctcatttcctatt 402  Q
    | |||  || |||||||||    
T  8951229 tgacgattcctttcctatt 8951247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 190 - 351
Target Start/End: Complemental strand, 47144921 - 47144760
Alignment:
Q  190 cctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaa 289  Q
    |||||||| | | |||||| ||||||||| || ||| || |||||||| |||||||||| ||||||||||| | ||  |||||| || ||  | ||||||    
T  47144921 cctgaatgcaaataaattgcaaaacagtctctaaatataaactttgttagtcaatttcaaggactaaagtgaccaacggagtctgcattcaggaactaaa 47144822  T
Q  290 ttgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    |||| ||||| |||||  ||||| ||||||||||||||||  ||||||||||||||||||||    
T  47144821 ttgattaacggagtctttattcaaggactaaattgactaactgagtctacattcaggaacta 47144760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 55382835 - 55382732
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||| |||||  ||||  ||| |||||||||||||||||||| ||| |||||| |||| |||| |||||||||||||||||| ||||    
T  55382835 attagtcactttagtccttgaataggaaatgagtcgtcactttaatccctgaatgcagataaattgcaaaatagtctctgaatgtagactttgttagtca 55382736  T
Q  243 attt 246  Q
    ||||    
T  55382735 attt 55382732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 245 - 382
Target Start/End: Original strand, 1387444 - 1387582
Alignment:
Q  245 ttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcaggg-actaaattgactaatagagtctacattc 343  Q
    |||||| ||||||||| |||| | |||||||| ||   ||||||||||||||||  ||||||||||||||| ||||||||||  || | | |||||||||    
T  1387444 ttcaggaactaaagtgactaacaaagtctacattcagcgactaaattgactaacagagtctgcattcaggggactaaattgatgaacaaaatctacattc 1387543  T
Q  344 aggaactattttacaatttatctgtattcagggactaaa 382  Q
    ||| | |||||||||||||||||| |||||||| |||||    
T  1387544 agggaatattttacaatttatctgcattcagggcctaaa 1387582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 138 - 259
Target Start/End: Complemental strand, 3391296 - 3391170
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgaga-----aagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagact 232  Q
    |||||||||||||||||||| | ||||||| |     || |||||||||||||| || ||||||| |||||||||| |||||| ||  ||||||||||||    
T  3391296 ggggaattagtcactttagttcttgaatgaaagaaaaaaaaagtagtcactttagtctctgaatgcagagaaattgcaaaacaatcattgaatgtagact 3391197  T
Q  233 ttgttggtcaatttcagggactaaagt 259  Q
    ||||| |||||||||| ||||||||||    
T  3391196 ttgttagtcaatttcaaggactaaagt 3391170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 37695075 - 37695193
Alignment:
Q  286 taaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagta 385  Q
    |||||||||||||  ||||||||||||  || |||||||||||| |||||||||||||||  | |||||| ||||||||||| ||||| ||||||||||     
T  37695075 taaattgactaacagagtctgcattcaacgattaaattgactaacagagtctacattcagagattattttgcaatttatctgcattcaaggactaaagtg 37695174  T
Q  386 acgtctcatttcctattca 404  Q
    | | |||||||||| ||||    
T  37695175 atgactcatttccttttca 37695193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 404
Target Start/End: Complemental strand, 29908996 - 29908907
Alignment:
Q  315 gactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattca 404  Q
    |||||||||||||||  |||||| |||||| |||||||||| ||||||||||| || ||| ||||||||| ||| |||||||||||||||    
T  29908996 gactaaattgactaacggagtctgcattcatgaactattttgcaatttatctgcatccagtgactaaagtgacgactcatttcctattca 29908907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 30471097 - 30470994
Alignment:
Q  143 attagtcactttagtccctgaatgagaaaga-agtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    |||||||||||||||| |||||| ||||| | ||| ||||||||| | |||||||||||| ||||||||||| |||||||||||||||||| ||||  ||    
T  30471097 attagtcactttagtctctgaat-agaaaaagagtcgtcactttagttcctgaatgtagataaattgtaaaatagtccctgaatgtagactatgttaatc 30470999  T
Q  242 aattt 246  Q
    |||||    
T  30470998 aattt 30470994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 181 - 319
Target Start/End: Original strand, 8951058 - 8951196
Alignment:
Q  181 actttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcg 280  Q
    |||||| |||||||||||| |||||||| |||||||||  ||||||||||||  |||||||||||| ||  |||||| || ||||   |||||||| |      
T  8951058 actttagtccctgaatgtaaagaaattgcaaaacagtctttgaatgtagactcagttggtcaatttaagaaactaaaatgactaacgaagtctacattaa 8951157  T
Q  281 aggactaaattgactaacgaagtctgcattcagggacta 319  Q
     | ||||||||||||||| || ||| |||||||| ||||    
T  8951158 ggaactaaattgactaacaaaatctacattcaggaacta 8951196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 1387622 - 1387519
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||| ||||||||||||||||  ||||||| |  ||| ||||  ||||||||| ||| ||||||||||| | |||||||||||||| ||||||  |||    
T  1387622 attagttactttagtccctgaataggaaagaaatcatcattttaggccctgaatgcagataaattgtaaaatattccctgaatgtagattttgttcatca 1387523  T
Q  243 attt 246  Q
    ||||    
T  1387522 attt 1387519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 2634303 - 2634200
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||| | ||| |||||  |||  |||||||| || ||||||||||| ||||||  ||| |||| ||||||||||||| |||| ||||    
T  2634303 attagtcactttagtccttaaataagaaatgagtcttcactttagtcactgaatgtagataaattgctaaatagtctctgaatgtagactctgttagtca 2634204  T
Q  243 attt 246  Q
    ||||    
T  2634203 attt 2634200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 5448196 - 5448299
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||| ||||| |||||||||  ||||| |||  ||| |||| |||||||||| ||| ||||||||||| || ||||||||||| ||| |||| ||||    
T  5448196 attagtccctttattccctgaataggaaaggagtcatcattttagtccctgaatgcagataaattgtaaaatagcccctgaatgtaaactctgttagtca 5448295  T
Q  243 attt 246  Q
    ||||    
T  5448296 attt 5448299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 47943727 - 47943624
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||  ||||||||||||||  ||||  ||| ||||||||| ||| | |||| ||| |||||| |||| ||||||||||||||||||| ||| ||||    
T  47943727 attagtcgttttagtccctgaataggaaatgagtcgtcactttagtccttaaatgcagataaattgcaaaatagtccctgaatgtagacttggttagtca 47943628  T
Q  243 attt 246  Q
    ||||    
T  47943627 attt 47943624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 240 - 312
Target Start/End: Complemental strand, 29909039 - 29908967
Alignment:
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattca 312  Q
    ||||||||||| |||||||||  |||| || |||||| || | ||||||||||||||||| ||||||||||||    
T  29909039 tcaatttcaggaactaaagtgaataatggactctacattcaacgactaaattgactaacggagtctgcattca 29908967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 427
Target Start/End: Complemental strand, 47463905 - 47463809
Alignment:
Q  331 agagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||||||||||||||   ||| |||| ||||||||||| |||||||||||||||| ||  ||||||||| || ||| || ||||||| ||||| ||||    
T  47463905 agagtctacattcaaagactgttttgcaatttatctgcattcagggactaaagtgactactcatttcccatccagggactaaagtgactaatttccc 47463809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 22018129 - 22018026
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||||| |||  ||||  ||| |||| |||  || ||||||| ||| |||||| |||| |||||||||||||||||| |||| |||     
T  22018129 attagtcactttagtccctaaataggaaatgagtcgtcattttcgtctctgaatgcagataaattgcaaaatagtccctgaatgtagactatgttagtct 22018030  T
Q  243 attt 246  Q
    ||||    
T  22018029 attt 22018026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 55382576 - 55382667
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagact 232  Q
    |||||||||| |||||| | ||||||  |||  ||||||||||||| ||| |||||| |||||||||| ||| |||||| ||||| ||||||    
T  55382576 gaattagtcattttagttcttgaatggaaaatgagtagtcactttagtccgtgaatgcagagaaattgcaaagcagtccttgaatatagact 55382667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 282 - 344
Target Start/End: Original strand, 12140774 - 12140836
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattca 344  Q
    |||||||| |||||||| || ||| |||||| ||||||||||||||||  |||||||||||||    
T  12140774 ggactaaaatgactaacaaattctacattcaaggactaaattgactaacggagtctacattca 12140836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 1387385 - 1387454
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    |||||||| ||||||||||||||| ||||| || ||||||||||||||  | || | |||||||||||||    
T  1387385 ggactaaagtgactaacgaagtctacattccggaactaaattgactaacggggtttgcattcaggaacta 1387454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 5448372 - 5448437
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||| || ||||| |||||||||| ||| |||| |||||| |||| ||||||||||||||||    
T  5448372 aaattgaccaacagagtttacattcagggactgttttgcaatttctctgcattcagggactaaagt 5448437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 9826631 - 9826732
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||| ||||||||||  ||||||| |  |||||||| ||| |||||| ||| |||||| |||| |||  ||||||||| ||| |||| |||    
T  9826631 aattagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtc 9826730  T
Q  242 aa 243  Q
    ||    
T  9826731 aa 9826732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 22017985 - 22017888
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    |||||||| || ||| | |||||||||| ||| |||| |||||| |||| |||||||||||||||| ||  ||| ||||| |||||| || |||||||    
T  22017985 aaattgaccaacagaatatacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcctttcccattcagggattaaagtg 22017888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 370 - 427
Target Start/End: Original strand, 47463916 - 47463973
Alignment:
Q  370 ttcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||||||||||||||| ||| ||||||||||||||||  | ||||||| ||||||||||    
T  47463916 ttcagggactaaagtgacgactcatttcctattcaggaactaaagtgactaatctccc 47463973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 246
Target Start/End: Complemental strand, 2232614 - 2232546
Alignment:
Q  178 gtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    ||||||||| ||||| |||||| | ||||||||||| ||||| | |||||||||| |||| ||||||||    
T  2232614 gtcactttagtccctaaatgtaaataaattgtaaaatagtccttcaatgtagactatgttagtcaattt 2232546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 10380874 - 10380771
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||| |||||   ||| |||| || ||||||  ||||||||  ||| |||||| |||| |||| || |||||||||| |||| ||||    
T  10380874 attagtcactttagtccttgaatagaaaataagtcgtaactttagcccctgaattcagataaattgcaaaatagtctctaaatgtagactctgttagtca 10380775  T
Q  243 attt 246  Q
    ||||    
T  10380774 attt 10380771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 17381660 - 17381561
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||| |||||||||| ||||||||||||| || ||||||||||  || ||||| ||||||   |||||  |||| ||||||||| |||  ||||||||    
T  17381660 ggggaagtagtcactttggtccctgaatgagtaacaagtagtcacaatagtccctcaatgtatcaaaattccaaaatagtccctgattgtgcactttgtt 17381561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 10757696 - 10757746
Alignment:
Q  301 agtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    ||||| |||||||||||||||||||||||  |||||| |||||||| ||||    
T  10757696 agtctacattcagggactaaattgactaacggagtctgcattcagggacta 10757746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 10970867 - 10970917
Alignment:
Q  301 agtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    ||||| |||||||||||||||||||||||  |||||| |||||||| ||||    
T  10970867 agtctacattcagggactaaattgactaacggagtctgcattcagggacta 10970917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 37695004 - 37694938
Alignment:
Q  318 taaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||||||||| || | | |||||||||||| ||| |||| |||||| |||| ||||||||||||||||    
T  37695004 taaattgaccaacacaatctacattcagggactgttttgcaatttctctgcattcagggactaaagt 37694938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 10757659 - 10757570
Alignment:
Q  333 agtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaat 422  Q
    ||||||||| || | ||| |||| ||||||||||  |||||||||||||||| ||  ||||||||  |||||| || ||||||| |||||    
T  10757659 agtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaat 10757570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 333 - 422
Target Start/End: Complemental strand, 10970830 - 10970741
Alignment:
Q  333 agtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaat 422  Q
    ||||||||| || | ||| |||| ||||||||||  |||||||||||||||| ||  ||||||||  |||||| || ||||||| |||||    
T  10970830 agtctacatccatggactgttttgcaatttatctacattcagggactaaagtgactactcatttctcattcagggactaaagtgactaat 10970741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 422
Target Start/End: Original strand, 30378952 - 30379017
Alignment:
Q  357 caatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaat 422  Q
    |||||| |||| ||| |||||||||||| ||  ||||||||||||| ||||| ||||||| |||||    
T  30378952 caatttctctgcattaagggactaaagtgactactcatttcctatttagagactaaagtgactaat 30379017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 8951220 - 8951164
Alignment:
Q  190 cctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    ||||||| |||| |||| |||||| ||| |||||||||||| |||||| ||||||||    
T  8951220 cctgaatatagataaatggtaaaatagttcctgaatgtagattttgttagtcaattt 8951164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 2e-78; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 138 - 426
Target Start/End: Complemental strand, 21515028 - 21514740
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||| ||||||||||  ||||  |||||||| |||| ||| |||||||||| |||||  ||||||||||||||||||||||| | ||    
T  21515028 ggggaattagtcacttttgtccctgaattggaaatgagtagtcattttagtccttgaatgtagataaatttcaaaacagtccctgaatgtagactatatt 21514929  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||| ||| ||||||  |||| |||||| ||| || |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||    
T  21514928 ggtcaatttcatggattaaagtaactaacagagtccacattcaaggactaaattgactaacgaagtccgcattcagggactaaattaactaacagagtct 21514829  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctcc 426  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| ||| ||  |||  |||||| ||| ||||||| |||||||||    
T  21514828 acattcaaggactattttacaatttatctgtattcagggactaaagtgacgacttcttttatattcaaagactaaagtgactaatctcc 21514740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 176 - 427
Target Start/End: Complemental strand, 48755574 - 48755322
Alignment:
Q  176 tagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaata-gagtcta 274  Q
    ||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||| ||||||||||||||||||   |||||| |||| | |||||||    
T  48755574 tagtcactttagtccctgaatgcagagaaattgcaaaacagttcctgaatgtagactctgttggtcaatttcaggggtcaaagtgactaacacgagtcta 48755475  T
Q  275 cactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcag 374  Q
    || ||  |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||| ||||||    
T  48755474 cattcatggactaaattgactaacggagtctgcattcagggactaaattgactaacagagtctacattcagggactattttgcaacttatctgcattcag 48755375  T
Q  375 ggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
     ||||||||| ||| ||| |||||||||||| || ||||||| ||||||||||    
T  48755374 agactaaagtgacgactcctttcctattcagggactaaagtgactaatctccc 48755322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 171 - 428
Target Start/End: Complemental strand, 1426726 - 1426478
Alignment:
Q  171 agaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagag 270  Q
    |||| |||||| ||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||| |||||| |         |||    
T  1426726 agaattagtcattttaatccctgaatgcagagaaattgcaaaacagtcactgaatgtagactttgttggtcaatttcagtgactaacg---------gag 1426636  T
Q  271 tctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtat 370  Q
    |||||| |   |||||||||||||||||| ||||||||||||||||||||||||||||| | | ||||||||||||||||||||| ||||||||||| ||    
T  1426635 tctacatttagggactaaattgactaacggagtctgcattcagggactaaattgactaacataatctacattcaggaactattttgcaatttatctgcat 1426536  T
Q  371 tcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccct 428  Q
    |||||  ||||||| ||| ||||||||||||||||||| ||||||| |||||||||||    
T  1426535 tcaggatctaaagtgacgactcatttcctattcagagactaaagtgactaatctccct 1426478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 138 - 366
Target Start/End: Original strand, 11989040 - 11989268
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||| |||||||||||| ||||||||| | ||||||||||||||||||| || ||||||| |||||||||| |||||||||||||||| |||||| ||||    
T  11989040 ggggtattagtcacttttgtccctgaaagggaaagaagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctgaatatagactctgtt 11989139  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    |||||||||||| |||||||||||||||  ||||||||| |  ||||||||||||| ||||| ||||||||||||||||||| ||||||||| |||||||    
T  11989140 ggtcaatttcagagactaaagtggctaacggagtctacatttaaggactaaattgattaacggagtctgcattcagggactagattgactaacagagtct 11989239  T
Q  338 acattcaggaactattttacaatttatct 366  Q
    |||   ||  |||||||| ||||||||||    
T  11989240 acaactagagactattttgcaatttatct 11989268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 138 - 427
Target Start/End: Complemental strand, 33343288 - 33343001
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||| |||||||||| ||||  ||||| || |||| |  ||||||| |||||||||| |||||||||| ||||| || ||| ||||    
T  33343288 ggggaattagtcactttaatccctgaatgggaaatgagtagacattttagttactgaatgcagagaaattgcaaaacagtccttgaatataaactctgtt 33343189  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||||| |||||| ||  ||| | |||||||| ||  |||||||||||||||||  ||| |||||||||||||||| |||||||| | |||||    
T  33343188 ggtcaatttcaggaactaaa-tgattaacaaagtctacattcagggactaaattgactaacatagtttgcattcagggactaa-ttgactaacatagtct 33343091  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||||||||| || ||||  ||||||||||| |||||||||||||||| ||| ||||||| |||||||| || ||||||| ||||||||||    
T  33343090 acattcagggaccatttagcaatttatctgcattcagggactaaagtgacgactcattttctattcagggactaaagtgactaatctccc 33343001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 139 - 351
Target Start/End: Complemental strand, 15031503 - 15031291
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    |||||||||||||||||||||||||||| ||||  ||||||||||||| || ||||||| |||||||||| |||||||||||| ||| ||||||||||||    
T  15031503 gggaattagtcactttagtccctgaatgggaaatgagtagtcactttagtctctgaatgcagagaaattgcaaaacagtccctaaatctagactttgttg 15031404  T
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtcta 338  Q
    |||||||||||||||||||||| ||||  ||||||||| ||   ||||||||||||||||| ||||| ||||||| |||||||||||||||  |||| |     
T  15031403 gtcaatttcagggactaaagtgactaacggagtctacattcagtgactaaattgactaacggagtctacattcagtgactaaattgactaacggagtttg 15031304  T
Q  339 cattcaggaacta 351  Q
    |||||||| ||||    
T  15031303 cattcagggacta 15031291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 176 - 402
Target Start/End: Complemental strand, 44968100 - 44967875
Alignment:
Q  176 tagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctac 275  Q
    ||||||||||| ||| |||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| |||||||||    
T  44968100 tagtcactttagtcc-tgaatgtagataaattgcaaaacagtccctaaatgtagactttgttggtcaatttcagggattaaagtgactaagagagtctac 44968002  T
Q  276 actcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagg 375  Q
    | || | ||||||||||||||| |  ||||| ||| || ||||||||||||||| ||||||||||||||  ||||||||| |||| ||| || |||||||    
T  44968001 attcaaagactaaattgactaatggggtctgtattgagagactaaattgactaacagagtctacattcaaaaactattttgcaatatatttgcattcagg 44967902  T
Q  376 gactaaagtaacgtctcatttcctatt 402  Q
    ||||||||| ||  ||||||| |||||    
T  44967901 gactaaagtgacaactcattttctatt 44967875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 139 - 303
Target Start/End: Complemental strand, 38498386 - 38498222
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||| | |||||||| |||| |||| ||||||||||||||||||     
T  38498386 gggaattagtcactttaatccctgaatgagaaaggagtagtcactttagtccctgaatgcatagaaattgcaaaatagtctctgaatgtagactttgtta 38498287  T
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagt 303  Q
    || ||||| ||||||||||||| ||||||||||||||| ||  ||||||||||||||||| ||||    
T  38498286 gttaattttagggactaaagtgactaatagagtctacattcagggactaaattgactaacaaagt 38498222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 139 - 358
Target Start/End: Complemental strand, 15005241 - 15005022
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    ||||||||||||||||| ||| |||||| | ||  | | ||||||||| || ||||||| |||||||||| ||||||||  ||||||||||||| ||| |    
T  15005241 gggaattagtcactttaatccttgaatgggtaatgactggtcactttagtctctgaatgcagagaaattgcaaaacagtttctgaatgtagactctgtcg 15005142  T
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtcta 338  Q
    |||||||||||||| | ||||| |||| | ||| |||| || ||||||||||| ||||||  |||||||||||||||| |||||||||||| ||||||||    
T  15005141 gtcaatttcagggatttaagtgactaacaaagtatacattcaaggactaaattaactaactgagtctgcattcagggattaaattgactaacagagtcta 15005042  T
Q  339 cattcaggaactattttaca 358  Q
    |||||| | |||||||||||    
T  15005041 cattcaaggactattttaca 15005022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 245 - 427
Target Start/End: Complemental strand, 15031365 - 15031183
Alignment:
Q  245 ttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattca 344  Q
    ||||| ||||||| || ||||  ||||||||| ||   ||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  15031365 ttcagtgactaaattgactaacggagtctacattcagtgactaaattgactaacggagtttgcattcagggactaaattgactaacagagtctacattca 15031266  T
Q  345 ggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    || |||||||||||||||||||| ||||| |||||||||| ||| ||| ||||| |||||  || ||||||||||||||||||    
T  15031265 gggactattttacaatttatctgcattcaaggactaaagtgacgactcttttcccattcaaggactaaagtggctaatctccc 15031183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 143 - 384
Target Start/End: Original strand, 18445405 - 18445646
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||| ||||||| |||||  ||||||||||| | | | |||||| |||||||||| |||||||| | |||| ||||||| |||| ||||    
T  18445405 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 18445504  T
Q  243 atttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatt 342  Q
    |||||| ||| ||| ||| ||||  ||||||| | ||  ||| |||||||| |||||||||||||||||||  ||||| |||||||| | ||| ||||||    
T  18445505 atttcaaggattaatgtgactaactgagtctaaattctgggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 18445604  T
Q  343 caggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||| ||||||||| ||||||||||| ||||| ||||||||||    
T  18445605 cagaaactattttgcaatttatctgcattcatggactaaagt 18445646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 142 - 319
Target Start/End: Original strand, 26498547 - 26498724
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||  ||||||||    
T  26498547 aattagtcactttagtccctgaatgggaaaagagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagaccatgttggtc 26498646  T
Q  242 aatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggacta 319  Q
    ||||||||||||||||||| ||||  |||| | || ||   ||||||||||||||||  ||||| |||||| ||||||    
T  26498647 aatttcagggactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattcatggacta 26498724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 144 - 355
Target Start/End: Original strand, 14434641 - 14434852
Alignment:
Q  144 ttagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaa 243  Q
    |||||||||||| ||| |||||| ||||  | ||||||||||| ||| | |||| ||||| |||| |||||||||| ||||||||||||||||| || ||    
T  14434641 ttagtcactttaatccatgaatgggaaatgaatagtcactttagtccgtaaatgcagagatattgcaaaacagtccttgaatgtagactttgttagttaa 14434740  T
Q  244 tttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattc 343  Q
    ||||||||||||||||| |||   ||||||||| ||   ||||||||| |||| |  ||| ||||||||||||||||||||||||| |||||||||||||    
T  14434741 tttcagggactaaagtgactagcggagtctacattcagagactaaattaactatctgagtttgcattcagggactaaattgactaacagagtctacattc 14434840  T
Q  344 aggaactatttt 355  Q
    | | ||||||||    
T  14434841 atggactatttt 14434852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 142 - 384
Target Start/End: Complemental strand, 26920435 - 26920193
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||| |||||| | |||||||   |||| |||||| |||||| ||  |||||| ||| |||||| |||||||| | |||||||| ||||||||| ||    
T  26920435 aattagtgactttaattcctgaatagaaaagtagtagttactttagtctatgaatgcagaaaaattgcaaaacagttcttgaatgtatactttgttgatc 26920336  T
Q  242 aatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacat 341  Q
    ||||||||||| ||||||| ||||| ||| ||||| |  ||||||||||||||||||||||| | |||| ||| |||||||| |||||||||||||| ||    
T  26920335 aatttcagggattaaagtgactaatggagcctacatttaaggactaaattgactaacgaagtatacattgaggaactaaattaactaatagagtctatat 26920236  T
Q  342 tcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    | ||  |||||||| |||||||| |  ||||| ||||||||||    
T  26920235 ttagagactattttgcaatttatttagattcatggactaaagt 26920193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 140 - 297
Target Start/End: Complemental strand, 20759209 - 20759052
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    ||||||||||  ||||||||||||||||||||| |||||||| |||| ||| |||||| |||||||||| |||| ||||| ||||||||||||||||| |    
T  20759209 ggaattagtcgttttagtccctgaatgagaaaggagtagtcattttagtccttgaatgcagagaaattgcaaaatagtccttgaatgtagactttgttag 20759110  T
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaa 297  Q
    ||||||||||||||||||||| |||| | ||||||  |||  ||||||||||||||||    
T  20759109 tcaatttcagggactaaagtgactaacatagtctattctcagggactaaattgactaa 20759052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 282 - 422
Target Start/End: Original strand, 26498655 - 26498795
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaa 381  Q
    |||||||| ||||||||| ||| ||||||||| |||||||||||||||  ||||||||||||| | |||||||| ||||||||||| |||||||||||||    
T  26498655 ggactaaagtgactaacggagtatgcattcagtgactaaattgactaaccgagtctacattcatggactattttgcaatttatctgcattcagggactaa 26498754  T
Q  382 agtaacgtctcatttcctattcagagagtaaagtggctaat 422  Q
    ||| | | ||||||||||||||||||| ||||||| |||||    
T  26498755 agtgatgactcatttcctattcagagactaaagtgactaat 26498795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 310 - 427
Target Start/End: Complemental strand, 20759071 - 20758954
Alignment:
Q  310 tcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagag 409  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||| |||||||||| ||| || ||||| ||||||||||     
T  20759071 tcagggactaaattgactaatagagtctatattcagagactattttacaatttatctgtattcaaggactaaagtgacgacttatttcatattcagagat 20758972  T
Q  410 taaagtggctaatctccc 427  Q
    |||||||  |||||||||    
T  20758971 taaagtgattaatctccc 20758954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 138 - 429
Target Start/End: Original strand, 43562604 - 43562886
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagta--gtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttg 235  Q
    ||||||||||||||||||||| ||||||| ||||  ||||  |||| |||  ||  |||||| |||||||||| |||||||||| |||||||            
T  43562604 ggggaattagtcactttagtctctgaatgggaaaagagtaatgtcaatttggtcattgaatgcagagaaattgcaaaacagtccttgaatgt-------- 43562695  T
Q  236 ttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagt 335  Q
       |||||||| || |||||||||| ||||    ||||||| ||  ||| |||||||||||| ||||||||||||||  || ||||||||| || ||| |    
T  43562696 ---gtcaattttagagactaaagtgactaacgatgtctacattcagggattaaattgactaatgaagtctgcattcaacgattaaattgacaaacagaat 43562792  T
Q  336 ctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccctt 429  Q
    ||||||||| | |||||||||||||||||||| ||||||  |||||| | |||  |||||||||||| || || |||| || ||||||||||||    
T  43562793 ctacattcaaggactattttacaatttatctgcattcagaaactaaaatgacgaatcatttcctattgagggactaaaatgactaatctccctt 43562886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 169 - 265
Target Start/End: Complemental strand, 39541863 - 39541767
Alignment:
Q  169 aaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaa 265  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||| ||||||||||||| | |||| |||||| ||||    
T  39541863 aaagaagtagtcactttagtccctgaatgcagagaaattgtaaaacagtctctgaatgtagactctgttggtcaattttaaggacaaaagtgactaa 39541767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 282 - 424
Target Start/End: Complemental strand, 38498275 - 38498133
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaa 381  Q
    |||||||| |||||||   ||||| ||||||||||||||||||||||| | ||| || ||| | | |||||||| ||||||||||| |||||||||||||    
T  38498275 ggactaaagtgactaatagagtctacattcagggactaaattgactaacaaagtttatatttatggactattttgcaatttatctgcattcagggactaa 38498176  T
Q  382 agtaacgtctcatttcctattcagagagtaaagtggctaatct 424  Q
    ||| |   ||||||| ||||||||||| |||| || |||||||    
T  38498175 agtgatcactcattttctattcagagactaaactgactaatct 38498133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 15031188 - 15031291
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||| ||||||||||| |||||| ||||  ||| ||||||||| ||| |||||| ||| ||||||||||| |||||||||||||||||| |||| ||||    
T  15031188 attagccactttagtccttgaatgggaaaagagtcgtcactttagtccttgaatgcagataaattgtaaaatagtccctgaatgtagactctgttagtca 15031287  T
Q  243 attt 246  Q
    ||||    
T  15031288 attt 15031291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 48755327 - 48755430
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||||||||||  ||||| ||| ||||||||| || ||||||| ||| || ||| |||| |||||||||||||||||| |||| ||||    
T  48755327 attagtcactttagtccctgaataggaaaggagtcgtcactttagtctctgaatgcagataagttgcaaaatagtccctgaatgtagactctgttagtca 48755426  T
Q  243 attt 246  Q
    ||||    
T  48755427 attt 48755430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 316 - 426
Target Start/End: Complemental strand, 42453149 - 42453039
Alignment:
Q  316 actaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagt 415  Q
    |||||||||||||| |||||||||||| ||| |||||||| |||||||| || |||||  ||||||||| ||| ||||||| |||||||  || ||||||    
T  42453149 actaaattgactaacagagtctacatttagggactattttgcaatttatttgcattcatagactaaagtgacgactcattttctattcaaggattaaagt 42453050  T
Q  416 ggctaatctcc 426  Q
    | |||||||||    
T  42453049 gactaatctcc 42453039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 314 - 434
Target Start/End: Complemental strand, 39541782 - 39541662
Alignment:
Q  314 ggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaa 413  Q
    |||| ||| ||||||| | | |||| ||||||| |||| ||| ||||||||||| |||||| ||||||||| ||| |||||||||||||||| || ||||    
T  39541782 ggacaaaagtgactaacataatctatattcagggactactttgcaatttatctgcattcagagactaaagtgacgactcatttcctattcagtgactaaa 39541683  T
Q  414 gtggctaatctcccttctttt 434  Q
    | | |||||||||||| ||||    
T  39541682 gcgactaatctcccttttttt 39541662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 274
Target Start/End: Original strand, 41984905 - 41985036
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||| ||||||| |||||  ||||||||||| | | | |||||| |||||||||| |||||||| | |||| ||||||| |||| ||||    
T  41984905 attagtcactttagttcctgaataagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 41985004  T
Q  243 atttcagggactaaagtggctaatagagtcta 274  Q
    |||||| ||| ||| ||| ||||  |||||||    
T  41985005 atttcaaggattaatgtgactaactgagtcta 41985036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 141 - 375
Target Start/End: Complemental strand, 26840268 - 26840038
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt-gg 239  Q
    |||||||||| ||| ||||||||| ||||||  || |||||||||| |   |||||| |||||||||| ||| || ||||||||| |||||| |||| ||    
T  26840268 gaattagtca-tttggtccctgaacgagaaatgagcagtcactttagttt-tgaatgcagagaaattgcaaagcaatccctgaatatagactctgtttgg 26840171  T
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctac 339  Q
    | |||| || ||| ||||||| |||| ||||| || | || ||||||||||| ||||||| ||||| || | |  ||||||||||||   ||||||||||    
T  26840170 ttaattccatggattaaagtgactaacagagtttatattcaaggactaaattaactaacggagtcttcaattaaagactaaattgac---tagagtctac 26840074  T
Q  340 attcaggaactattttacaatttatctgtattcagg 375  Q
    |||||   ||||||||  |||||||||  |||||||    
T  26840073 attcaaagactattttgtaatttatctacattcagg 26840038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 21514744 - 21514847
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||  |||||   |||||||| ||||||||| |||||||||  ||| ||||||||||| ||||| |||||||||||| |||| || |    
T  21514744 attagtcactttagtctttgaatataaaagaagtcgtcactttagtccctgaatacagataaattgtaaaatagtccttgaatgtagactctgttagtta 21514843  T
Q  243 attt 246  Q
    ||||    
T  21514844 attt 21514847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 143 - 245
Target Start/End: Original strand, 33343006 - 33343108
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||||||||||   |||  ||| ||||||||| |||||||||| ||| ||||||  |||  ||||||||||||||||| |||| ||||    
T  33343006 attagtcactttagtccctgaatagaaaatgagtcgtcactttagtccctgaatgcagataaattgctaaatggtccctgaatgtagactatgttagtca 33343105  T
Q  243 att 245  Q
    |||    
T  33343106 att 33343108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 215 - 329
Target Start/End: Complemental strand, 36383205 - 36383091
Alignment:
Q  215 agtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagg 314  Q
    |||||||||||| | ||| |||| |||||||| ||||||||||||| ||||   |||||| | ||   |||||||||||| ||| ||||||||||||| |    
T  36383205 agtccctgaatgcaaactctgttagtcaattttagggactaaagtgactaacgaagtctatattcagagactaaattgaccaacaaagtctgcattcaag 36383106  T
Q  315 gactaaattgactaa 329  Q
    || ||||||||||||    
T  36383105 gattaaattgactaa 36383091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 48755504 - 48755569
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||| || |||||||||||||||||||| |||| |||||| |||| ||||||||||||||||    
T  48755504 aaattgaccaacagagtctacattcaggaactgttttgcaatttctctgcattcagggactaaagt 48755569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 281 - 425
Target Start/End: Original strand, 7300157 - 7300300
Alignment:
Q  281 aggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggacta 380  Q
    ||||||||| ||||||||  |||||||||| ||||| |||||||||||| ||| |||||| |   | ||||||||  ||||||| || | ||  ||||||    
T  7300157 aggactaaagtgactaacagagtctgcatttagggattaaattgactaacagaatctacaatttcgtactattttgtaatttatgtgca-tcgaggacta 7300255  T
Q  381 aagtaacgtctcatttcctattcagagagtaaagtggctaatctc 425  Q
    || ||||| ||| ||||||||||||||| ||||||  ||||||||    
T  7300256 aaataacgactcctttcctattcagagactaaagtaactaatctc 7300300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 26498795 - 26498692
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||| ||||||  ||||  |||  |||||||| |||||||||| ||| |||||| |||| ||||| ||||||||||||  ||| ||||    
T  26498795 attagtcactttagtctctgaataggaaatgagtcatcactttagtccctgaatgcagataaattgcaaaatagtccatgaatgtagactcggttagtca 26498696  T
Q  243 attt 246  Q
    ||||    
T  26498695 attt 26498692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 338 - 427
Target Start/End: Complemental strand, 33412288 - 33412199
Alignment:
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    ||||||| | |||||||||||||||||||| ||||   || |||||| |||  |||||||||||||| ||| ||||||| ||||||||||    
T  33412288 acattcaaggactattttacaatttatctgcattcgaagattaaagtgacgattcatttcctattcaaagactaaagtgactaatctccc 33412199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 39541786 - 39541851
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||| || |||||||||||||||  ||| ||||||||||| |||| ||||||||||||||||    
T  39541786 aaattgaccaacagagtctacattcagagactgttttacaatttctctgcattcagggactaaagt 39541851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 334 - 422
Target Start/End: Complemental strand, 26498636 - 26498548
Alignment:
Q  334 gtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaat 422  Q
    ||||||||||||| ||| |||| |||||| |||| |||||||||||||||| ||  ||| ||||| |||||| || ||||||| |||||    
T  26498636 gtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcttttcccattcagggactaaagtgactaat 26498548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 1426484 - 1426587
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||| ||||||  ||||  ||| |||||||||   |||||||| ||| |||||| |||| ||| |||||||||||| | |||| ||||    
T  1426484 attagtcactttagtctctgaataggaaatgagtcgtcactttagatcctgaatgcagataaattgcaaaatagttcctgaatgtagattatgttagtca 1426583  T
Q  243 attt 246  Q
    ||||    
T  1426584 attt 1426587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 243
Target Start/End: Complemental strand, 18445685 - 18445584
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||| ||||||||||  ||||||| |  |||||||| ||| |||||| ||| |||||| |||| |||  ||||||||| ||| |||| |||    
T  18445685 aattagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtc 18445586  T
Q  242 aa 243  Q
    ||    
T  18445585 aa 18445584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 20758959 - 20759062
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||| |||||||| || ||||||  |||| |||| ||||||||| ||| |||||  ||| ||||||||||| |||| |||||| |||||| | || ||||    
T  20758959 attaatcactttaatctctgaatatgaaataagtcgtcactttagtccttgaatacagataaattgtaaaatagtctctgaatatagactctattagtca 20759058  T
Q  243 attt 246  Q
    ||||    
T  20759059 attt 20759062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 20759103 - 20759166
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaa 382  Q
    ||||||||||| | |||||||||||| | |||||||| |||||| |||| ||||| ||||||||    
T  20759103 aaattgactaacaaagtctacattcaaggactattttgcaatttctctgcattcaaggactaaa 20759166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 21514920 - 21515023
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggc 418  Q
    |||||||| |||| |||||||||||||| ||| ||||  |||||||||  ||||| |||||||| | ||  ||||||||| |||||| ||  |||||| |    
T  21514920 aaattgaccaatatagtctacattcagggactgttttgaaatttatctacattcaaggactaaaatgactactcatttccaattcagggacaaaagtgac 21515019  T
Q  419 taat 422  Q
    ||||    
T  21515020 taat 21515023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 351
Target Start/End: Complemental strand, 38498277 - 38498238
Alignment:
Q  312 agggactaaattgactaatagagtctacattcaggaacta 351  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  38498277 agggactaaagtgactaatagagtctacattcagggacta 38498238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 422
Target Start/End: Original strand, 38498279 - 38498382
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggc 418  Q
    ||||| ||||| | |||||||||||||  |||||||| |||||| | || |||||||||||||||| ||  ||| ||||  |||||| || ||||||| |    
T  38498279 aaattaactaacaaagtctacattcagagactattttgcaatttctatgcattcagggactaaagtgactactcctttctcattcagggattaaagtgac 38498378  T
Q  419 taat 422  Q
    ||||    
T  38498379 taat 38498382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 282 - 344
Target Start/End: Complemental strand, 36383170 - 36383108
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattca 344  Q
    |||||||| |||||||||||||||  |||||| |||||||||||| || | ||||| ||||||    
T  36383170 ggactaaagtgactaacgaagtctatattcagagactaaattgaccaacaaagtctgcattca 36383108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 384
Target Start/End: Original strand, 15005146 - 15005199
Alignment:
Q  331 agagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||||||||||||||| |||| |||| |||||| |||| |||||| |||||||||    
T  15005146 agagtctacattcagaaactgttttgcaatttctctgcattcagagactaaagt 15005199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 138 - 166
Target Start/End: Complemental strand, 48755581 - 48755553
Alignment:
Q  138 ggggaattagtcactttagtccctgaatg 166  Q
    |||||||||||||||||||||||||||||    
T  48755581 ggggaattagtcactttagtccctgaatg 48755553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 3e-77; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 138 - 416
Target Start/End: Original strand, 10760003 - 10760280
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||| |||||||| ||  |||  ||||| ||||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  10760003 ggggaattagtcactttggtccctgagtggaaaatgagtagccactttagttcctgaatgtagagaaattgaaaaacagtccctgaatgtaaactttgtt 10760102  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||| |||||||| ||  |||  ||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  10760103 ggtcaatttcaaggactaaa-tgattaacggagtctacattcagggactaaattgactaacggagtctgcattcagggactaaattgacttacagagtct 10760201  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    ||||| ||| |||||||| ||||||||||| |||||| ||||||||| ||| |||||||||||||||| || |||||||    
T  10760202 acatttagggactattttgcaatttatctgcattcagagactaaagtgacggctcatttcctattcagggattaaagtg 10760280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 138 - 425
Target Start/End: Complemental strand, 2555723 - 2555436
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||| |||||||||||||| |||| || |||| |||||| || || |||| ||| |||||| |||||||||||||||||||||||  |||    
T  2555723 ggggaattagtcacgttagtccctgaatgggaaataattagttactttagtctctaaatgcagaaaaattgcaaaacagtccctgaatgtagactgcgtt 2555624  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||||||| ||||||| ||||   |||||||  ||  ||||||| |||||||||||||||||||||||  ||||||||||||||| |||||||    
T  2555623 ggtcaatttcagggattaaagtgactaacgaagtctacgttcagggactaatttgactaacgaagtctgcattcaacgactaaattgactaacagagtct 2555524  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctc 425  Q
    ||||||||  |||||||| |||| ||| ||||||||||||||||||| ||| ||||||||||| ||||||  ||||||| ||||||||    
T  2555523 acattcagagactattttgcaatatatttgtattcagggactaaagttacgactcatttcctactcagaggctaaagtgactaatctc 2555436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 141 - 416
Target Start/End: Original strand, 21943741 - 21944016
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggt 240  Q
    ||||||||||||||||||| |||||| ||||  ||||||||||||| | |||||||| |||||||||| ||||||| || ||||||||||||||||| ||    
T  21943741 gaattagtcactttagtccttgaatgggaaatgagtagtcactttagtacctgaatgcagagaaattgcaaaacagaccttgaatgtagactttgttagt 21943840  T
Q  241 caatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctaca 340  Q
    |||||| |||||||||||||  ||| | | |||||| || | |||||||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||    
T  21943841 caattttagggactaaagtgattaacataatctacattcaaagactaaattgactaacaaagtatgcattcagggactaaattgattaacagagtctaca 21943940  T
Q  341 ttcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    |||| |||||||||| |||||||| || |||||  ||||||| | |||  |||||| |||||||| || |||||||    
T  21943941 ttcatgaactattttgcaatttatttgcattcaatgactaaaatgacgattcattttctattcagggactaaagtg 21944016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 138 - 429
Target Start/End: Original strand, 13753224 - 13753515
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||||||||| |||   |||  ||||||||||||| ||  |||||| |||||||||| ||||||||  |||| |||||||| ||||    
T  13753224 ggggaattagtcactttagtccctaaatagaaaatgagtagtcactttagtcattgaatgcagagaaattgcaaaacagtatctgagtgtagactctgtt 13753323  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||||||||||||||| || || ||||||||  ||  || ||||||||||||||| |||||||||| | |||||||||||||| | |||||||    
T  13753324 ggtcaatttcagggactaaagtgactgatggagtctactttcaggggctaaattgactaacggagtctgcatttaaggactaaattgacttacagagtct 13753423  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccctt 429  Q
    ||||| ||| |||||||| ||||||||||| |||||| ||||||| | ||| ||  ||||||||| || || ||||||| ||||||||||||    
T  13753424 acatttagggactattttgcaatttatctgcattcagagactaaaatgacgacttctttcctatttagggactaaagtgactaatctccctt 13753515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 140 - 365
Target Start/End: Complemental strand, 17497277 - 17497052
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    ||||| |||||||||||||| |||||||||||  |||||||| |||| |||||||||| |||||||||| |||| |||||||||||||||||||||||||    
T  17497277 ggaatgagtcactttagtccgtgaatgagaaatgagtagtcattttagtccctgaatgcagagaaattgcaaaatagtccctgaatgtagactttgttgg 17497178  T
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctac 339  Q
    ||||||||||||||||||||| |  |  ||||||||| ||  |||||||||| ||||||  | |||||||||| |||||||||||||||| |||| ||||    
T  17497177 tcaatttcagggactaaagtgaccgacggagtctacattcagggactaaattaactaacagaatctgcattcaaggactaaattgactaacagagactac 17497078  T
Q  340 attcaggaactattttacaatttatc 365  Q
    ||||| | |||||||| |||||||||    
T  17497077 attcacggactattttgcaatttatc 17497052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 138 - 375
Target Start/End: Original strand, 30100609 - 30100843
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||||||||| | |||||||  ||||||||||||||||||| |||| |||||||||| |||||| ||| |||||||||||||| ||    
T  30100609 ggggaattagtcactttagtccctaagtgagaaaagagtagtcactttaatccctaaatgcagagaaattgcaaaacaatccttgaatgtagactttatt 30100708  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
       |||||||||||||||||||| | || |||||||||| ||  |||||| ||||||||| | ||||||||||||||||||||| ||| ||| |||||||    
T  30100709 ---caatttcagggactaaagtgacaaacagagtctacattcagggactatattgactaatggagtctgcattcagggactaaagtgattaacagagtct 30100805  T
Q  338 acattcaggaactattttacaatttatctgtattcagg 375  Q
     |||||| | |||||||| ||||||||||  |||||||    
T  30100806 gcattcatggactattttgcaatttatctacattcagg 30100843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 211 - 427
Target Start/End: Complemental strand, 30852790 - 30852581
Alignment:
Q  211 aaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcatt 310  Q
    ||||||||||||| |||||||| ||||||||||||||| | ||||||||| ||||  || |||||| ||   ||||||||||||| ||||||||||||||    
T  30852790 aaacagtccctgattgtagactctgttggtcaatttcatgaactaaagtgactaacggaatctacattcagagactaaattgacttacgaagtctgcatt 30852691  T
Q  311 cagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagt 410  Q
    ||||||||||||||||||| ||||| ||||||||||||||||       ||||||||||||||||||||||||| ||| || ||||||||||||  || |    
T  30852690 cagggactaaattgactaacagagtttacattcaggaactat-------tttatctgtattcagggactaaagtgacgacttatttcctattcaaggact 30852598  T
Q  411 aaagtggctaatctccc 427  Q
    |||||| ||||||||||    
T  30852597 aaagtgactaatctccc 30852581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 143 - 384
Target Start/End: Complemental strand, 19491951 - 19491710
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||| |||||||||||||  ||||||||||| | ||| |||||| |||||||||| |||||||| | |||| ||||||| |||| ||||    
T  19491951 attagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 19491852  T
Q  243 atttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatt 342  Q
    |||||| ||| ||| ||| ||||  ||||||| | ||  |||||||||||| |||||||||||||||||||  ||||| |||||||| | ||| ||||||    
T  19491851 atttcaaggattaatgtgactaactgagtctaaattcagggactaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 19491752  T
Q  343 caggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||  ||||||||| ||||||||||| |||||  |||||||||    
T  19491751 cataaactattttgcaatttatctgcattcatagactaaagt 19491710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 138 - 364
Target Start/End: Original strand, 20429872 - 20430098
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||| |||||  | ||| ||| |||||||||| |||||||||  |||||||||||| ||||    
T  20429872 ggggagttagtcactttagtccctgaatgtgaaaggagtagtcgctttagcctctggatgcagagaaattgcaaaacagtctttgaatgtagactctgtt 20429971  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    ||||||||||| ||||||||||| | || ||||| |||| || |  |||||||| ||||||  |||||||||||| | ||||||||||||||  ||||||    
T  20429972 ggtcaatttcaaggactaaagtgacgaacagagtttacattcaaaaactaaattaactaacagagtctgcattcatgaactaaattgactaacggagtct 20430071  T
Q  338 acattcaggaactattttacaatttat 364  Q
    | |||||  ||||||||| ||||||||    
T  20430072 atattcaaaaactattttgcaatttat 20430098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 138 - 416
Target Start/End: Original strand, 31912191 - 31912469
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||||||||||||||||| |||||| ||||  | |||||| ||||||||||||||| ||||| ||||||||||||||  | || ||||||   |||    
T  31912191 ggggaattagtcactttagtccttgaatgggaaaagaatagtcattttaatccctgaatgcagagacattgtaaaacagtcatttaacgtagacaacgtt 31912290  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
     |||||||||| ||||||||||| |||| |||||||||| |  | ||||||||||||||||| |||||| ||||| ||||||||| ||  || | | |||    
T  31912291 agtcaatttcatggactaaagtgactaacagagtctacagtaaatgactaaattgactaacggagtctgtattcaaggactaaatcgatcaacataatct 31912390  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    ||||||| ||| ||||||||||||||| |  ||| | |||||||| | ||| ||  ||||||||||||| | |||||||    
T  31912391 acattcaagaattattttacaatttatttacatttatggactaaaatgacgacttctttcctattcagaaactaaagtg 31912469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 215 - 413
Target Start/End: Complemental strand, 34419687 - 34419489
Alignment:
Q  215 agtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagg 314  Q
    ||||||||||||||||||||||||||||||||||||||||||| || | || |||||||||| |  ||||||||||||||||||||||||||| || |      
T  34419687 agtccctgaatgtagactttgttggtcaatttcagggactaaaatgaccaacagagtctacatttaaggactaaattgactaacgaagtctgcttttatc 34419588  T
Q  315 gactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaa 413  Q
    ||||||||||||||| |||   |||||||||| |||||||| ||||||||||| |||| | || |||||| ||| ||| ||| ||||||||||| ||||    
T  34419587 gactaaattgactaacagaacttacattcagggactattttgcaatttatctgcattctgagattaaagtgacgactccttttctattcagagactaaa 34419489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 145 - 323
Target Start/End: Original strand, 21211419 - 21211596
Alignment:
Q  145 tagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaat 244  Q
    |||||||||||||||||||||| ||||  ||||||||||||| |||||||||| ||| |||||| ||||||||| |||||||||||||||||||||||||    
T  21211419 tagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagaaaaattgcaaaacagtctctgaatgtagactttgttggtcaat 21211518  T
Q  245 ttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaatt 323  Q
    |||||| ||||||||| ||||   | |||||| ||   ||||||||| ||||||| | |||||||||| | ||||||||    
T  21211519 ttcaggaactaaagtgactaacgcaatctacattcagagactaaattaactaacgga-tctgcattcatgaactaaatt 21211596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 140 - 402
Target Start/End: Original strand, 19564650 - 19564914
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaa---gtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgt 236  Q
    |||||||||||||||||||| ||||| | ||| ||   |||||||||| | ||| | |||  | |||||||| ||||||||  || |||||||||| ||     
T  19564650 ggaattagtcactttagtccttgaataaaaaaaaaaaagtagtcactt-agtccattaatacacagaaattgcaaaacagtttctaaatgtagactctgg 19564748  T
Q  237 tggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtc 336  Q
    || |||||||||||||||||||||  |||| ||||||||| ||   ||||||||||||||||| ||| || | ||| ||| ||||||||||||   |||     
T  19564749 tgatcaatttcagggactaaagtgattaatggagtctacattcagagactaaattgactaacggagtatggaatcaaggaataaattgactaacgaagtt 19564848  T
Q  337 tacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctatt 402  Q
    ||||||||  ||||||||| ||||||||||  ||||| |||||||||| ||| || ||||||||||    
T  19564849 tacattcaaaaactattttgcaatttatctccattcaaggactaaagtgacgactgatttcctatt 19564914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 43549053 - 43548938
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggt 240  Q
    |||||||||||||||||| |||||||| || ||| ||||||||||| ||| ||| || |||||||||| |||||||| | |||||||||||| |||||||    
T  43549053 gaattagtcactttagtctctgaatgaaaaggaaatagtcactttagtccttgattgcagagaaattgcaaaacagtacatgaatgtagactatgttggt 43548954  T
Q  241 caatttcagggactaa 256  Q
    |||||| ||| |||||    
T  43548953 caattttaggaactaa 43548938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 216 - 366
Target Start/End: Complemental strand, 11298165 - 11298015
Alignment:
Q  216 gtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcaggg 315  Q
    |||| |||||| |||||||||| |||||||| |  || |||||||  ||| |||||||||| ||  | |||||||||||||| | ||||||||||||| |    
T  11298165 gtccttgaatgaagactttgttagtcaattttaaagattaaagtgattaacagagtctacattcaggaactaaattgactaatggagtctgcattcagag 11298066  T
Q  316 actaaattgactaatagagtctacattcaggaactattttacaatttatct 366  Q
    |||||||||||||| ||||||||  |||||| | |||||| ||||||||||    
T  11298065 actaaattgactaacagagtctatgttcagggattattttgcaatttatct 11298015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 201 - 313
Target Start/End: Original strand, 32539326 - 32539437
Alignment:
Q  201 agaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacga 300  Q
    |||||||| ||||||||| ||||||||||| | | ||  ||||||||||| ||||||||| |||| | |||||||| || || |||||||||||||||||    
T  32539326 agaaattgcaaaacagtctctgaatgtagagtatattaatcaatttcagg-actaaagtgactaacatagtctacattcaagaactaaattgactaacga 32539424  T
Q  301 agtctgcattcag 313  Q
    ||| |||||||||    
T  32539425 agtatgcattcag 32539437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 13753508 - 13753405
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||||| |||  ||||||||| |||| |||| || ||||||| ||| |||||| |||| ||||||| |||||||||| |||  ||||    
T  13753508 attagtcactttagtccctaaataggaaagaagtcgtcattttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtca 13753409  T
Q  243 attt 246  Q
    ||||    
T  13753408 attt 13753405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 142 - 201
Target Start/End: Complemental strand, 34419731 - 34419672
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtaga 201  Q
    |||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||||||    
T  34419731 aattagtcactttaatccttgaatgagaaaggagtagtcactttagtccctgaatgtaga 34419672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 191 - 365
Target Start/End: Complemental strand, 12895757 - 12895585
Alignment:
Q  191 ctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaat 290  Q
    ||||||| |||||||||| |||||||||  |||||||||| ||||||||||| ||| ||| ||||||||   |||   |||||||| |  |  |||||||    
T  12895757 ctgaatgcagagaaattgcaaaacagtcgttgaatgtagattttgttggtcatttt-aggtactaaagtaattaacgaagtctacattt-ataactaaat 12895660  T
Q  291 tgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatc 365  Q
    ||||||||  |||||||||| | ||| |||||||||||| | ||||||||||| |  ||||||||  ||||||||    
T  12895659 tgactaacagagtctgcatttaaggattaaattgactaacaaagtctacattcggagactattttttaatttatc 12895585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 21211520 - 21211423
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    |||||||| || | |||||||||||||  ||| |||| |||||| |||| |||||||||||||||| ||  ||||||||| |||||| || |||||||    
T  21211520 aaattgaccaacaaagtctacattcagagactgttttgcaatttttctgcattcagggactaaagtgactactcatttcccattcagggactaaagtg 21211423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 319 - 382
Target Start/End: Original strand, 17497171 - 17497234
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaa 382  Q
    |||||||| || | |||||||||||||| |||||||| |||||| |||| ||||||||||||||    
T  17497171 aaattgaccaacaaagtctacattcagggactattttgcaatttctctgcattcagggactaaa 17497234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 10760284 - 10760183
Alignment:
Q  145 tagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaat 244  Q
    ||||||||||| |||||||||  ||||  ||  ||||||||| || ||||||| ||| |||||| |||| ||||||| |||||||||| |||  ||||||    
T  10760284 tagtcactttaatccctgaataggaaatgagccgtcactttagtctctgaatgcagataaattgcaaaatagtccctaaatgtagactctgtaagtcaat 10760185  T
Q  245 tt 246  Q
    ||    
T  10760184 tt 10760183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 21943846 - 21943743
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggc 418  Q
    ||||||||||| | |||||||||||| |  || |||| |||||| |||| ||||||| |||||||| ||  ||||||||| |||||  || ||||||| |    
T  21943846 aaattgactaacaaagtctacattcaaggtctgttttgcaatttctctgcattcaggtactaaagtgactactcatttcccattcaaggactaaagtgac 21943747  T
Q  419 taat 422  Q
    ||||    
T  21943746 taat 21943743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 30852586 - 30852639
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaat 196  Q
    ||||||||||||||||| |||||  |||| |||| ||||||||| |||||||||    
T  30852586 attagtcactttagtccttgaataggaaataagtcgtcactttagtccctgaat 30852639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 348 - 384
Target Start/End: Original strand, 21211604 - 21211640
Alignment:
Q  348 actattttacaatttatctgtattcagggactaaagt 384  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  21211604 actattttgcaatttatctgcattcagggactaaagt 21211640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 152 - 228
Target Start/End: Original strand, 34419489 - 34419565
Alignment:
Q  152 tttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgta 228  Q
    ||||||| ||||||   |||| ||| |||||||||||| | ||||| ||| |||||| |||| ||||||||||||||    
T  34419489 tttagtctctgaatagaaaaggagtcgtcactttaatctcagaatgcagataaattgcaaaatagtccctgaatgta 34419565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 1e-64; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 138 - 403
Target Start/End: Complemental strand, 22093144 - 22092879
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||| |||||||||| ||||||||  |||  | |||| |||||| ||||||||||||||||||||| ||||||||| ||||||||||| | ||||    
T  22093144 ggggaattaatcactttagttcctgaatggaaaatgattagttactttagtccctgaatgtagagaaattgcaaaacagtctctgaatgtagattctgtt 22093045  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
    |||||| |||||||||||||||| | ||  ||||||| | ||  ||||||||||||| || | |||||||||||||| |||||| ||||||| |||||||    
T  22093044 ggtcaaattcagggactaaagtgacaaacggagtctatattcagggactaaattgacgaatggagtctgcattcaggaactaaactgactaacagagtct 22092945  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattc 403  Q
    ||||||||| |||||||||||||||||||| | ||| |||||||||| ||| ||| ||||||||||    
T  22092944 acattcagggactattttacaatttatctgcaatcaaggactaaagtgacgactcctttcctattc 22092879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 138 - 429
Target Start/End: Original strand, 24006875 - 24007166
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||| ||||||||| ||  ||||||| |||| || ||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  24006875 ggggaatcagtcactttggtttctgaatgggaaaaaattagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtt 24006974  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtct 337  Q
      |||||||||| ||||||| ||  ||| |||||||||| ||  | |||| |||||  |||| | |||||||||| |||||||||||||||| |||||||    
T  24006975 actcaatttcagagactaaaatgattaacagagtctacattcaggtactacattgatcaacggaatctgcattcatggactaaattgactaacagagtct 24007074  T
Q  338 acattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccctt 429  Q
    |||||||    ||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||  ||  |||||| ||||| ||||||    
T  24007075 acattcaaagtctattttacaatttatctgtattcaaggactaaagtaacgactcatttcctagtcaaggaccaaagtgactaatttccctt 24007166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 168 - 366
Target Start/End: Original strand, 31499376 - 31499573
Alignment:
Q  168 gaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaata 267  Q
    ||||||||||||||||||||| | | |||  |||||||||| |||||||||  | |||||||| |||||||||||||||||||||| |||||| | ||||    
T  31499376 gaaagaagtagtcactttaattcttaaatacagagaaattgcaaaacagtcttt-aatgtagattttgttggtcaatttcagggaccaaagtgacaaata 31499474  T
Q  268 gagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatct 366  Q
     |||||||| || ||||||||||||||||||| |||||||||||||  |||||| ||||||| ||| |||||||||||| |||||||||||||||||||    
T  31499475 aagtctacattcaaggactaaattgactaacggagtctgcattcagaaactaaaatgactaacagattctacattcagggactattttacaatttatct 31499573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 138 - 319
Target Start/End: Original strand, 32092754 - 32092935
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||||||||||||||||||||||| ||||  ||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||| ||||    
T  32092754 ggggaattagtcactttagtccctgaatgggaaatgagtagtcactttagtccctgaatgcagagaaattgcaaaacagtccctgaatgtagactctgtt 32092853  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggacta 319  Q
     |||||| ||||| ||||||||| ||||   |||||||| ||  |||||||||||||||||  ||||| |||||||||||||    
T  32092854 tgtcaatctcaggaactaaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattcagggacta 32092935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 210 - 382
Target Start/End: Original strand, 39598574 - 39598746
Alignment:
Q  210 aaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcat 309  Q
    |||||||| | ||||||||||||||||| |||||||| ||||||||||||| ||||  ||||||||| ||  |||||||||||||||||| ||| | |||    
T  39598574 aaaacagttcttgaatgtagactttgttagtcaattttagggactaaagtgactaacggagtctacattcagggactaaattgactaacggagtatacat 39598673  T
Q  310 tcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaa 382  Q
    |||| |||||||||||| || | |||||||||||||| |||||||| ||||||||||| |||||| |||||||    
T  39598674 tcagcgactaaattgaccaacaaagtctacattcagggactattttgcaatttatctgcattcagtgactaaa 39598746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 145 - 427
Target Start/End: Complemental strand, 31820191 - 31819910
Alignment:
Q  145 tagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaat 244  Q
    ||||||||||||| | ||||||| |||  | |||||| |||| |  ||||||  ||||||| |  |||||||| | |||||||||| | |||| ||||||    
T  31820191 tagtcactttagttcatgaatgaaaaatgaatagtcattttagtttctgaatacagagaaaatacaaaacagttcatgaatgtagattctgttagtcaat 31820092  T
Q  245 ttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattca 344  Q
    || |||||||||||||  |||  |||| |||| ||   |||||||||||||||  ||||||||||||| ||||||||| |||||| ||||||||||||||    
T  31820091 tttagggactaaagtgattaacggagtatacattcagagactaaattgactaagaaagtctgcattcaaggactaaatggactaacagagtctacattca 31819992  T
Q  345 ggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    |  |||||||| ||||||||||| ||| |||||||||| | |||  || |||||||||| | || ||||||| ||||||||||    
T  31819991 gtgactattttccaatttatctgcatttagggactaaaatgacgattcctttcctattc-gggactaaagtgactaatctccc 31819910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 284 - 384
Target Start/End: Original strand, 32092868 - 32092968
Alignment:
Q  284 actaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaag 383  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||||||    
T  32092868 actaaagtgactaacgaagtctacattcagggactaaattgactaacagagtctacattcagggactatttttcaatttatctgcattcagggactaaag 32092967  T
Q  384 t 384  Q
    |    
T  32092968 t 32092968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 143 - 246
Target Start/End: Complemental strand, 39598786 - 39598683
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||||| |||  ||||||| |  ||| |||| || ||||||| ||| |||||| |||| ||||||||||||||||||||||||||||    
T  39598786 attagtcactttagtccctcaataggaaagaaattttcattttagtcactgaatgcagataaattgcaaaatagtccctgaatgtagactttgttggtca 39598687  T
Q  243 attt 246  Q
    ||||    
T  39598686 attt 39598683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 286 - 364
Target Start/End: Complemental strand, 8219275 - 8219198
Alignment:
Q  286 taaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttat 364  Q
    |||||||||||||| |||||||||||||  |||||||||||||| |||||||||||||| | |||||||||||||||||    
T  8219275 taaattgactaacggagtctgcattcagaaactaaattgactaacagagtctacattcaag-actattttacaatttat 8219198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 321 - 422
Target Start/End: Complemental strand, 32092860 - 32092759
Alignment:
Q  321 attgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggcta 420  Q
    |||||| || |||||||||||||||| ||| |||| |||||| |||| |||||||||||||||| ||  ||||||||| |||||| || ||||||| |||    
T  32092860 attgacaaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagtgactactcatttcccattcagggactaaagtgacta 32092761  T
Q  421 at 422  Q
    ||    
T  32092760 at 32092759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 32092973 - 32092903
Alignment:
Q  176 tagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    ||||||||||| |||||||||| ||| |||||| |||| |||||||||||||||||| |||| ||||||||    
T  32092973 tagtcactttagtccctgaatgcagataaattgaaaaatagtccctgaatgtagactctgttagtcaattt 32092903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 144 - 230
Target Start/End: Complemental strand, 31499629 - 31499542
Alignment:
Q  144 ttagtcactttagtccctgaatgagaaagaagt-agtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtaga 230  Q
    ||||||||||||||  | |||| |||||  ||| |||||||||||||  |||||||||| ||||||||||| ||||||||||||||||    
T  31499629 ttagtcactttagtgaccgaataagaaaatagtcagtcactttaatctttgaatgtagataaattgtaaaatagtccctgaatgtaga 31499542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 24006983 - 24006918
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||||||| ||| |||||||||||||||| ||| |||| |||||| |||| ||||||||||||||||    
T  24006983 aaattgagtaacagagtctacattcagggactgttttgcaatttctctgcattcagggactaaagt 24006918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 22092885 - 22092959
Alignment:
Q  168 gaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||| ||| ||||||||| ||| ||| || ||| ||||||||||| |||||||||||||||||| |||| ||||    
T  22092885 gaaaggagtcgtcactttagtccttgattgcagataaattgtaaaatagtccctgaatgtagactctgttagtca 22092959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 193 - 312
Target Start/End: Complemental strand, 17914202 - 17914083
Alignment:
Q  193 gaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattg 292  Q
    |||||||||||||||| ||||||||   |||||||||||| | || |||||||| || || ||||||| |||| | | |||||| |   || ||||||||    
T  17914202 gaatgtagagaaattgcaaaacagtttttgaatgtagactctattagtcaattttagtgattaaagtgactaacaaaatctacatttagggtctaaattg 17914103  T
Q  293 actaacgaagtctgcattca 312  Q
    |||||| || ||| ||||||    
T  17914102 actaacaaaatctacattca 17914083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 31819915 - 31820017
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||||| ||||  ||||| | | |||| |||| ||||| |||| ||| |||||| |||| |||| ||||||||||||| |||| |||     
T  31819915 attagtcactttagtccc-gaataggaaaggaatcgtcattttagtccctaaatgcagataaattggaaaatagtcactgaatgtagactctgttagtcc 31820013  T
Q  243 attt 246  Q
    ||||    
T  31820014 attt 31820017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 17914149 - 17914214
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||||||||||||||||||||||||||  |||| |||| |||||| |||  ||||  ||||||||||    
T  17914149 aaattgactaatagagtctacattcaaaaactgttttgcaatttctctacattcttggactaaagt 17914214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 291 - 351
Target Start/End: Complemental strand, 8219302 - 8219242
Alignment:
Q  291 tgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    ||||||||| ||||  |||||||||| ||||||||||||  |||||| ||||||| |||||    
T  8219302 tgactaacggagtccacattcagggattaaattgactaacggagtctgcattcagaaacta 8219242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 125; Significance: 4e-64; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 141 - 429
Target Start/End: Complemental strand, 24172 - 23885
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggt 240  Q
    ||||||||||||||| ||||||||||  ||||| |||||   |||| |||||||||| |||||||||| |||||| |||||||||||||| | |||||||    
T  24172 gaattagtcactttaatccctgaatggaaaaga-gtagttgttttagtccctgaatgcagagaaattgcaaaacaatccctgaatgtagattctgttggt 24074  T
Q  241 caatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctaca 340  Q
    |||||||| |||| |||||| | |||| |||||||| || |||||||||||||| |||  |||||||||||||||||||||||||||||   ||||||||    
T  24073 caatttcatggacaaaagtgacgaataaagtctacattcaaggactaaattgaccaacagagtctgcattcagggactaaattgactaacgtagtctaca 23974  T
Q  341 ttcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctccctt 429  Q
    ||| || || ||||| |||||||||| |||||| |||||||||  ||| ||||||||||||| ||  | ||||||| ||||||||||||    
T  23973 ttcggggaccattttgcaatttatctatattcaaggactaaagggacgactcatttcctatttaggaactaaagtgactaatctccctt 23885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 103; Significance: 6e-51; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 139 - 405
Target Start/End: Original strand, 190174 - 190440
Alignment:
Q  139 gggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttg 238  Q
    |||||||||||| ||||||||||||||| ||||  |||||||| |||| || ||||||| |||||||||| ||||||||| ||||||||||||| |||||    
T  190174 gggaattagtcattttagtccctgaatgggaaaagagtagtcattttagtctctgaatgcagagaaattgcaaaacagtctctgaatgtagactctgttg 190273  T
Q  239 gtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtcta 338  Q
    |||||||||||||| |||| ||  ||| | ||| |||| |   |||||||||||||||||  |||||| ||||||| |||||||||||||| | |||||     
T  190274 gtcaatttcagggattaaattgattaacatagtttacatttagggactaaattgactaacagagtctgtattcaggaactaaattgactaacaaagtctg 190373  T
Q  339 cattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcag 405  Q
     ||| || ||||||||| ||||||||||  ||||||||| ||||| ||||  || ||| ||||||||    
T  190374 tatttagaaactattttgcaatttatctacattcagggattaaaggaacgattctttttctattcag 190440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 190418 - 190354
Alignment:
Q  182 ctttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaattt 246  Q
    |||||||||||||||||||| |||||| |||| |||  || |||  |||||||||| ||||||||    
T  190418 ctttaatccctgaatgtagataaattgcaaaatagtttctaaatacagactttgttagtcaattt 190354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407 (Bit Score: 100; Significance: 3e-49; HSPs: 8)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 138 - 329
Target Start/End: Original strand, 831 - 1021
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||| |||||||||||  |||||||  |||  || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| | ||    
T  831 ggggaattggtcactttagtttctgaatggaaaaagagaagtcactttagtccctgaatgcagagaaattgcaaaacagtcc-tgaatgtagactctatt 929  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaa 329  Q
     |||||||||||||||||||||| |||| | |||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  930 agtcaatttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggactaaattgactaa 1021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 138 - 329
Target Start/End: Original strand, 7295 - 7485
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    |||||||| |||||||||||  |||||||  |||  || |||||||||| |||||||||| |||||||||| |||||||||| |||||||||||| | ||    
T  7295 ggggaattggtcactttagtttctgaatggaaaaagagaagtcactttagtccctgaatgcagagaaattgcaaaacagtcc-tgaatgtagactctatt 7393  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaa 329  Q
     |||||||||||||||||||||| |||| | |||||||| ||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  7394 agtcaatttcagggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggactaaattgactaa 7485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 1006 - 1108
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaa 381  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||  ||||||| || ||||| |||||||    
T  1006 ggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttcagggactattttgtaatttatttgcattcaaggactaa 1105  T
Q  382 agt 384  Q
    |||    
T  1106 agt 1108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 282 - 384
Target Start/End: Original strand, 7470 - 7572
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaa 381  Q
    |||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| |||||| ||||||||  ||||||| || ||||| |||||||    
T  7470 ggactaaattgactaacgaaatctgcattcagggactaaattgaataataaagtctacgttcagggactattttgtaatttatttgcattcaaggactaa 7569  T
Q  382 agt 384  Q
    |||    
T  7570 agt 7572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 938 - 842
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| |||| |||||||||||||||| || |||| ||| | ||||||| | |||||||    
T  938 aaattgactaatagagtctacattcagg-actgttttgcaatttctctgcattcagggactaaagtgacttctctttttccattcagaaactaaagtg 842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 319 - 416
Target Start/End: Complemental strand, 7402 - 7306
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    |||||||||||||||||||||||||||| ||| |||| |||||| |||| |||||||||||||||| || |||| ||| | ||||||| | |||||||    
T  7402 aaattgactaatagagtctacattcagg-actgttttgcaatttctctgcattcagggactaaagtgacttctctttttccattcagaaactaaagtg 7306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 942 - 1011
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    |||||||| |||||||| |||||| |||||||||| ||||||||||||   ||||| |||||||| ||||    
T  942 ggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggacta 1011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0407; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 282 - 351
Target Start/End: Original strand, 7406 - 7475
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaacta 351  Q
    |||||||| |||||||| |||||| |||||||||| ||||||||||||   ||||| |||||||| ||||    
T  7406 ggactaaagtgactaacaaagtctacattcagggattaaattgactaacgaagtctgcattcagggacta 7475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 96; Significance: 8e-47; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 203 - 374
Target Start/End: Complemental strand, 314296 - 314126
Alignment:
Q  203 aaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaag 302  Q
    |||||| |||||||||| | |||||||||| ||||||| ||||||||||||||||||| |||| ||| |||||| ||  |||||||||||||||||| ||    
T  314296 aaattgcaaaacagtcc-taaatgtagactctgttggttaatttcagggactaaagtgactaacagactctacattcagggactaaattgactaacggag 314198  T
Q  303 tctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcag 374  Q
    ||||||||||||||||||||||||||| |||||||||||| ||| |||||||| ||||| ||||| ||||||    
T  314197 tctgcattcagggactaaattgactaacagagtctacatttagggactattttgcaattaatctgcattcag 314126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 143 - 384
Target Start/End: Complemental strand, 57728 - 57487
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||| ||||||| |||||  ||||||||||| | | | | |||| |||||||||| |||||||| | |||| ||||||| |||| ||||    
T  57728 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtactttaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 57629  T
Q  243 atttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatt 342  Q
    |||||| ||| ||| ||| ||||  ||||||| | ||  |||||||||||| |||||||||||||||||||  ||||| |||||||| | ||| ||||||    
T  57628 atttcaaggattaatgtgactaactgagtctaaattcagggactaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 57529  T
Q  343 caggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||| ||||||||| ||||||||||| ||||| ||||||||||    
T  57528 cagaaactatttttcaatttatctgcattcatggactaaagt 57487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 143 - 384
Target Start/End: Complemental strand, 128083 - 127842
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||| ||||||| |||||  ||||||||||| | | | |||||| |||||||||| |||||||| | |||| ||||||| |||| ||||    
T  128083 attagtcactttagttcctgaatcagaaaagagtagtcacttaagtacttgaatgcagagaaattgcaaaacagtgcttgaacgtagactctgttagtca 127984  T
Q  243 atttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacatt 342  Q
    |||||| ||| ||| ||| ||||  ||||||| | ||  ||| |||||||| |||||||||||||||||||  ||||| |||||||| | ||| ||||||    
T  127983 atttcaaggattaatgtgactaactgagtctaaattctgggattaaattgattaacgaagtctgcattcagatactaagttgactaacatagtatacatt 127884  T
Q  343 caggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||| ||||||||| ||||||||||| ||||| ||||||||||    
T  127883 cagaaactattttgcaatttatctgcattcatggactaaagt 127842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 142 - 243
Target Start/End: Original strand, 127803 - 127904
Alignment:
Q  142 aattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtc 241  Q
    ||||||||||||| ||||||||||  ||||||| |  |||||||| ||| |||||| ||| |||||| |||| |||  ||||||||| ||| |||| |||    
T  127803 aattagtcactttggtccctgaataggaaagaaattatcactttagtccatgaatgcagataaattgcaaaatagtttctgaatgtatactatgttagtc 127902  T
Q  242 aa 243  Q
    ||    
T  127903 aa 127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1300 (Bit Score: 91; Significance: 8e-44; HSPs: 1)
Name: scaffold1300
Description:

Target: scaffold1300; HSP #1
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 143 - 325
Target Start/End: Complemental strand, 1629 - 1447
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||| |||||||||||||  ||||||||||| | ||| |||||| |||||||||| |||||||||| |||| ||||||| |||| ||||    
T  1629 attagtcactttagttcctgaatgagaaaagagtagtcacttaagtccttgaatgcagagaaattgcaaaacagtccttgaacgtagactctgttagtca 1530  T
Q  243 atttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattga 325  Q
    |||||| ||| ||| ||| ||||| ||||||||| ||  |||||||||| ||||||||||||||||||||| |||||| ||||    
T  1529 atttcaaggattaatgtgactaattgagtctacattcagggactaaattaactaacgaagtctgcattcagagactaagttga 1447  T

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Target: scaffold0066 (Bit Score: 89; Significance: 1e-42; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 144 - 425
Target Start/End: Complemental strand, 15638 - 15362
Alignment:
Q  144 ttagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaa 243  Q
    ||||| |||||||||| |||||| || |  || ||||| |||| || ||||||| |||||||||| |||||||||| |||||    |||||||| |||||    
T  15638 ttagtgactttagtccatgaatgggagaatagaagtcaatttagtctctgaatgcagagaaattgcaaaacagtcc-tgaat----actttgttagtcaa 15544  T
Q  244 tttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattc 343  Q
    ||||||| ||||||  | || | ||| |||||| ||   |||||||||| |||||| ||||| ||||||| || |||||||||||| |||||||||||||    
T  15543 tttcaggtactaaaacgactgacagaatctacattcagagactaaattggctaacggagtctacattcagagattaaattgactaacagagtctacattc 15444  T
Q  344 aggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggctaatctc 425  Q
    ||  |||||||||||||||||||| ||||| |||||||||| ||  ||||||||  ||||| ||| ||||||| ||||||||    
T  15443 agagactattttacaatttatctgcattcaaggactaaagtgacaactcatttctaattcaaagactaaagtgactaatctc 15362  T

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Target: scaffold0066; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 15365 - 15468
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    ||||||||||||||||  ||||| |||||  ||| ||||||||| ||| |||||| ||| ||||||||||| |||| ||||||||||||| |||| ||||    
T  15365 attagtcactttagtctttgaattagaaatgagttgtcactttagtccttgaatgcagataaattgtaaaatagtctctgaatgtagactctgttagtca 15464  T
Q  243 attt 246  Q
    ||||    
T  15465 attt 15468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 73; Significance: 4e-33; HSPs: 3)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 149 - 293
Target Start/End: Original strand, 59711 - 59855
Alignment:
Q  149 cactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttca 248  Q
    ||||||||||||| |||| |||||  |||||||||||| |||||||||| |||||||||| ||||||| ||||||||||||||| |||| ||||||||||    
T  59711 cactttagtccctcaatgggaaaggtgtagtcactttagtccctgaatgcagagaaattgcaaaacagcccctgaatgtagactctgttagtcaatttca 59810  T
Q  249 gggactaaagtggctaatagagtctacactcgaggactaaattga 293  Q
    ||||||||| || ||||  |||||| || ||  ||||||||||||    
T  59811 gggactaaattgactaacggagtctgcattcagggactaaattga 59855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 325
Target Start/End: Original strand, 59812 - 59855
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattga 325  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  59812 ggactaaattgactaacggagtctgcattcagggactaaattga 59855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 59808 - 59743
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagt 384  Q
    ||||||||||| ||||||||||||||||  || |||| |||||| |||| ||||||||||||||||    
T  59808 aaattgactaacagagtctacattcaggggctgttttgcaatttctctgcattcagggactaaagt 59743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 67; Significance: 2e-29; HSPs: 4)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 141 - 227
Target Start/End: Complemental strand, 72192 - 72106
Alignment:
Q  141 gaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgt 227  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  72192 gaattagtcactttagtccctgaatgggaaagaagtagtcactttagtccctgaatgtgcagaaattgcaaaacagtccctgaatgt 72106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 188 - 296
Target Start/End: Complemental strand, 72116 - 72008
Alignment:
Q  188 tccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtcaatttcagggactaaagtggctaatagagtctacactcgaggacta 287  Q
    |||||||||||  |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| || |||| | ||| | || ||  ||||||    
T  72116 tccctgaatgtgcagaaattgcaaaacagtccctgaatgtagattttgatggtcaatttcagggactaaattgactaacaaagtttgcattcagggacta 72017  T
Q  288 aattgacta 296  Q
    |||||||||    
T  72016 aattgacta 72008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 282 - 384
Target Start/End: Complemental strand, 72054 - 71946
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgact-------aatagagtctacattcaggaactattttacaatttatctgtattcag 374  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||       |||  | |||| ||||||| |||||||| ||||||||||| ||||||    
T  72054 ggactaaattgactaacaaagtttgcattcagggactaaattgactattttgcaattta-tctatattcagggactattttgcaatttatctgcattcag 71956  T
Q  375 ggactaaagt 384  Q
    ||| ||||||    
T  71955 ggattaaagt 71946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 71943 - 71995
Alignment:
Q  178 gtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtaga 230  Q
    |||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||    
T  71943 gtcactttaatccctgaatgcagataaattgcaaaatagtccctgaatataga 71995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 65; Significance: 3e-28; HSPs: 3)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 140 - 324
Target Start/End: Original strand, 27486 - 27670
Alignment:
Q  140 ggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttgg 239  Q
    ||||||||||||||||||||||||||   |||  |||||| ||||||  ||||||||   ||||||||| ||||||||| || |||||||||| ||||||    
T  27486 ggaattagtcactttagtccctgaatagaaaatgagtagttactttagcccctgaatacggagaaattgcaaaacagtctcttaatgtagactctgttgg 27585  T
Q  240 tcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggactaaattg 324  Q
    ||||||||| ||||||||||| | ||   |||||||| ||  | | ||||||||||||||  || || |||||||||||||||||    
T  27586 tcaatttcaaggactaaagtgacgaacgaagtctacattcaggaagtaaattgactaacggggtatgtattcagggactaaattg 27670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 27592 - 27489
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtggc 418  Q
    |||||||| || |||||||||||| ||  ||| |||| |||||| || |||||||||| ||||||||||  ||||||| |||||||| || ||||||| |    
T  27592 aaattgaccaacagagtctacattaagagactgttttgcaatttctccgtattcaggggctaaagtaactactcattttctattcagggactaaagtgac 27493  T
Q  419 taat 422  Q
    ||||    
T  27492 taat 27489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 27595 - 27643
Alignment:
Q  281 aggactaaattgactaacgaagtctgcattcagggactaaattgactaa 329  Q
    ||||||||| |||| |||||||||| |||||||| | ||||||||||||    
T  27595 aggactaaagtgacgaacgaagtctacattcaggaagtaaattgactaa 27643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 62; Significance: 2e-26; HSPs: 4)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 282 - 427
Target Start/End: Complemental strand, 11745 - 11601
Alignment:
Q  282 ggactaaattgactaacgaagtctgcattcagggactaaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaa 381  Q
    |||||||| ||||||||  | | | ||||||| || ||||||| |||| | |||||||||||||| |||||||||||||||||||| ||| | |||||||    
T  11745 ggactaaagtgactaacagaatatacattcagagattaaattgcctaacatagtctacattcagggactattttacaatttatctgcattta-ggactaa 11647  T
Q  382 agtaacgtctcatttcctattcagagagtaaagtggctaatctccc 427  Q
    | ||||| |||||||||||||||| || ||||||| ||||||||||    
T  11646 aataacgactcatttcctattcagtgactaaagtgactaatctccc 11601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 138 - 319
Target Start/End: Complemental strand, 11855 - 11676
Alignment:
Q  138 ggggaattagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgtt 237  Q
    ||||||||| ||||||||||  ||||||| ||||  ||||||| ||||| |||||||||| |||||||||| |||| ||||| | |||  ||||| | ||    
T  11855 ggggaattaatcactttagtttctgaatgggaaatgagtagtcgctttagtccctgaatgcagagaaattgcaaaatagtccttaaat--agactctctt 11758  T
Q  238 ggtcaatttcagggactaaagtggctaatagagtctacactcgaggactaaattgactaacgaagtctgcattcagggacta 319  Q
     |||||||| ||||||||||||| |||| ||| | |||| ||   || ||||||| |||||  ||||| |||||||||||||    
T  11757 agtcaattttagggactaaagtgactaacagaatatacattcagagattaaattgcctaacatagtctacattcagggacta 11676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 246
Target Start/End: Original strand, 11606 - 11708
Alignment:
Q  143 attagtcactttagtccctgaatgagaaagaagtagtcactttaatccctgaatgtagagaaattgtaaaacagtccctgaatgtagactttgttggtca 242  Q
    |||||||||||||||| ||||||  ||||  ||| || | |||| ||| | |||| ||| ||||||||||| |||||||||||||||||| |||| | ||    
T  11606 attagtcactttagtcactgaataggaaatgagtcgttattttagtcc-taaatgcagataaattgtaaaatagtccctgaatgtagactatgttaggca 11704  T
Q  243 attt 246  Q
    ||||    
T  11705 attt 11708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 319 - 416
Target Start/End: Original strand, 11749 - 11844
Alignment:
Q  319 aaattgactaatagagtctacattcaggaactattttacaatttatctgtattcagggactaaagtaacgtctcatttcctattcagagagtaaagtg 416  Q
    ||||||||||| ||||||||  || | | |||||||| |||||| |||| |||||||||||||||  ||  ||||||||| ||||||| | |||||||    
T  11749 aaattgactaagagagtcta--tttaaggactattttgcaatttctctgcattcagggactaaagcgactactcatttcccattcagaaactaaagtg 11844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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