View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF0999-INSERTION-23 (Length: 326)
Name: NF0999-INSERTION-23
Description: NF0999
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF0999-INSERTION-23 |
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Alignment Details
Target: chr7 (Bit Score: 161; Significance: 8e-86; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 161; E-Value: 8e-86
Query Start/End: Original strand, 8 - 243
Target Start/End: Original strand, 27328882 - 27329116
Alignment:
| Q |
8 |
atcacattatttgcatgccactaaaatagcaccacaaattcatttggagtttgttgctctaagaaaaaataaatgtattaaattaaagttagctcttgag |
107 |
Q |
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| T |
27328882 |
atcacattatttgcatgccactaaaatagcaccgcaaattcatttggagttggttgctctaagaaaaaataaatgtattatattaaagttagctcttgag |
27328981 |
T |
|
| Q |
108 |
catattagtttgannnnnnnnaagaattgggaactagtagtgttcattttaaggtacaccatgaaaccnnnnnnnnnnattctttaaaagtgctctaact |
207 |
Q |
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| T |
27328982 |
catattagtttgatttttttaaagaattgggaactagtagtgttcattttaaggtacaccatgaaacc-tttttttttattctttaaaagtgctctaact |
27329080 |
T |
|
| Q |
208 |
tcatgtttgtaagacctttattaaccaggaacacca |
243 |
Q |
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||||||||| |||||||||||||||||||||||||| |
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| T |
27329081 |
tcatgtttgcaagacctttattaaccaggaacacca |
27329116 |
T |
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