View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10000_2 (Length: 337)
Name: NF10000_2
Description: NF10000
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10000_2 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 41704315 - 41703993
Alignment:
| Q |
1 |
ctattgtagctgtcaagaaagctagagttggtaaccttaaaagcacacaacaagtgcttaatgaggtttcaatactttctcaagttaatcacaagaacct |
100 |
Q |
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| T |
41704315 |
ctattgtagctgtcaagaaagctagagttggtaaccttaaaagcacacaacaagtgcttaatgaggtttcaatactttctcaagttaatcacaagaacct |
41704216 |
T |
|
| Q |
101 |
agtaagactcttaggttgctgtgtggaatctgagcagcctttgatgatctatgagtatatctcaaatgggaccctctatgaccatattcatggtagatat |
200 |
Q |
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| T |
41704215 |
agtaagactcttaggttgctgtgtggaatctgagcagcctttgatgatctatgagtatatctcaaatgggaccctctatgaccatattcatggtagatat |
41704116 |
T |
|
| Q |
201 |
ccaaattttcttgactggnnnnnnnggcttaagattgcttttcaaacagctgaagcattggcttacttgcattcttctgcacacacccctatttaccata |
300 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41704115 |
ccaaattttcttgactggaaaaaaaggcttaagattgcttttcaaacagctgaagcattggcttacttgcattcttctgcacacacccctatttaccata |
41704016 |
T |
|
| Q |
301 |
gagatgttaagtcaacaaatata |
323 |
Q |
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||||||||||||||||||||||| |
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| T |
41704015 |
gagatgttaagtcaacaaatata |
41703993 |
T |
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