View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10002_low_10 (Length: 284)
Name: NF10002_low_10
Description: NF10002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10002_low_10 |
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Alignment Details
Target: chr3 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 278
Target Start/End: Complemental strand, 32064353 - 32064082
Alignment:
| Q |
7 |
aagatgtctatccaaataagacctaaatctttattcacaattctaatttattgttgcactcacttcacccatttttaatcgcagtaaattcgagtttgca |
106 |
Q |
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| T |
32064353 |
aagatgtctatccaaataagacctaaatctttattcacaattctaatttattgttgcactcacttcacccatttttaatcgcagtaaattcgagtttgca |
32064254 |
T |
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| Q |
107 |
ttgggtcattgttatctacaacattacacaatgaatatattttggtatagcaagaaaatatacatgtacatggagagaggtggccttcacgtatatattt |
206 |
Q |
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| T |
32064253 |
ttgggtcattgttatctacaacattacacaatgaatatattttggtatagcaagaaaatatacatgtacatggagagaggtggccttcacgtatatattt |
32064154 |
T |
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| Q |
207 |
attaaatattataatgtaatacattgtcaacataatggtctaatggaatgcacgttgatcctaaccaccaaa |
278 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32064153 |
attaaatattataatgtaatacattgtcaacataatggtctaatggaatgcacgttgatcctaaccaccaaa |
32064082 |
T |
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