View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10002_low_8 (Length: 310)

Name: NF10002_low_8
Description: NF10002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10002_low_8
NF10002_low_8
[»] chr5 (14 HSPs)
chr5 (47-300)||(37173529-37173785)
chr5 (1-43)||(36440605-36440647)
chr5 (1-41)||(24040090-24040130)
chr5 (1-41)||(25183058-25183098)
chr5 (9-61)||(32288489-32288541)
chr5 (1-41)||(35569780-35569820)
chr5 (1-41)||(38958729-38958769)
chr5 (1-41)||(38959128-38959168)
chr5 (1-48)||(9989321-9989368)
chr5 (4-43)||(16860306-16860345)
chr5 (2-41)||(19184602-19184641)
chr5 (1-43)||(2182946-2182988)
chr5 (5-41)||(32288083-32288119)
chr5 (1-41)||(39325417-39325457)
[»] chr2 (22 HSPs)
chr2 (1-59)||(17032580-17032638)
chr2 (5-59)||(17050916-17050970)
chr2 (4-49)||(8174293-8174338)
chr2 (1-41)||(38333085-38333125)
chr2 (4-47)||(8962359-8962402)
chr2 (4-51)||(24138063-24138110)
chr2 (1-43)||(41474085-41474127)
chr2 (1-41)||(16305430-16305470)
chr2 (1-41)||(41474487-41474527)
chr2 (4-43)||(10991854-10991893)
chr2 (1-43)||(8445194-8445236)
chr2 (1-43)||(15744460-15744502)
chr2 (1-43)||(19816109-19816151)
chr2 (1-43)||(34735748-34735790)
chr2 (1-43)||(36713591-36713633)
chr2 (4-41)||(13193396-13193433)
chr2 (1-34)||(15405768-15405801)
chr2 (4-41)||(24138915-24138952)
chr2 (4-49)||(24372375-24372420)
chr2 (4-41)||(29472247-29472284)
chr2 (1-41)||(8444827-8444867)
chr2 (4-48)||(13192986-13193030)
[»] chr7 (28 HSPs)
chr7 (1-43)||(7579277-7579319)
chr7 (4-43)||(8417344-8417383)
chr7 (1-43)||(8416488-8416530)
chr7 (5-43)||(34037320-34037358)
chr7 (5-43)||(35147098-35147136)
chr7 (2-54)||(4155590-4155642)
chr7 (1-41)||(6356291-6356331)
chr7 (4-48)||(10526309-10526353)
chr7 (1-41)||(10526715-10526755)
chr7 (5-41)||(31075602-31075638)
chr7 (5-49)||(36423809-36423853)
chr7 (4-43)||(6356768-6356807)
chr7 (1-48)||(8542497-8542544)
chr7 (1-48)||(41453410-41453457)
chr7 (4-43)||(48626471-48626510)
chr7 (1-43)||(1114057-1114099)
chr7 (1-43)||(21391595-21391637)
chr7 (1-43)||(31638348-31638390)
chr7 (1-43)||(33716591-33716633)
chr7 (1-43)||(41192090-41192132)
chr7 (1-43)||(41891969-41892011)
chr7 (4-41)||(21391195-21391232)
chr7 (4-41)||(28286122-28286159)
chr7 (2-43)||(36674135-36674176)
chr7 (3-43)||(4931680-4931720)
chr7 (1-41)||(6356690-6356730)
chr7 (1-41)||(8936854-8936894)
chr7 (9-41)||(38447744-38447776)
[»] chr1 (38 HSPs)
chr1 (4-56)||(49644078-49644130)
chr1 (4-43)||(6798215-6798254)
chr1 (3-49)||(23598069-23598115)
chr1 (1-41)||(9006196-9006236)
chr1 (1-49)||(9006595-9006643)
chr1 (5-49)||(39486199-39486243)
chr1 (4-43)||(49140550-49140589)
chr1 (1-43)||(4696885-4696927)
chr1 (1-43)||(35612487-35612529)
chr1 (1-43)||(37467625-37467667)
chr1 (1-41)||(8760277-8760317)
chr1 (3-43)||(10831134-10831174)
chr1 (1-49)||(12481464-12481512)
chr1 (1-41)||(20306007-20306047)
chr1 (1-41)||(27547674-27547714)
chr1 (1-45)||(34966304-34966348)
chr1 (1-49)||(37304025-37304073)
chr1 (1-41)||(38000494-38000534)
chr1 (1-41)||(44323065-44323105)
chr1 (1-49)||(46593635-46593683)
chr1 (4-43)||(1763082-1763121)
chr1 (1-48)||(5537209-5537256)
chr1 (4-43)||(25995787-25995826)
chr1 (1-48)||(37304433-37304480)
chr1 (1-43)||(8762804-8762846)
chr1 (1-43)||(16023900-16023942)
chr1 (1-43)||(23476746-23476788)
chr1 (1-43)||(37586098-37586140)
chr1 (1-34)||(1762686-1762719)
chr1 (1-34)||(16024302-16024335)
chr1 (4-41)||(45052695-45052732)
chr1 (4-41)||(46289329-46289366)
chr1 (4-41)||(49140148-49140185)
chr1 (1-34)||(49643683-49643716)
chr1 (1-49)||(2064616-2064664)
chr1 (1-41)||(12127062-12127102)
chr1 (4-48)||(26723209-26723253)
chr1 (1-41)||(35612087-35612127)
[»] chr4 (43 HSPs)
chr4 (1-48)||(44991683-44991730)
chr4 (1-48)||(47602941-47602988)
chr4 (1-43)||(15478050-15478092)
chr4 (4-41)||(43566383-43566420)
chr4 (4-43)||(25182220-25182259)
chr4 (4-43)||(52557495-52557534)
chr4 (4-43)||(53259546-53259585)
chr4 (1-43)||(39448893-39448935)
chr4 (4-49)||(47603769-47603814)
chr4 (3-48)||(53995342-53995387)
chr4 (1-49)||(4513321-4513369)
chr4 (1-49)||(12817803-12817851)
chr4 (1-41)||(15477650-15477690)
chr4 (1-41)||(19088346-19088386)
chr4 (4-56)||(19088749-19088801)
chr4 (1-41)||(21763185-21763225)
chr4 (1-41)||(38339897-38339937)
chr4 (1-41)||(44991284-44991324)
chr4 (4-48)||(50508865-50508909)
chr4 (1-41)||(50769226-50769266)
chr4 (1-57)||(23756205-23756263)
chr4 (1-48)||(24898187-24898234)
chr4 (1-48)||(44957387-44957434)
chr4 (4-43)||(46850077-46850116)
chr4 (4-43)||(52692027-52692066)
chr4 (4-43)||(53751310-53751349)
chr4 (4-43)||(55022287-55022326)
chr4 (1-39)||(12818211-12818249)
chr4 (5-43)||(14985334-14985372)
chr4 (1-43)||(30683933-30683975)
chr4 (3-41)||(39448493-39448531)
chr4 (3-41)||(52557092-52557130)
chr4 (4-49)||(6711960-6712005)
chr4 (1-34)||(25269405-25269438)
chr4 (4-41)||(30683531-30683568)
chr4 (4-41)||(43734291-43734328)
chr4 (5-41)||(1433276-1433312)
chr4 (4-48)||(1433679-1433723)
chr4 (4-48)||(16038202-16038246)
chr4 (1-33)||(41752221-41752253)
chr4 (1-41)||(42855344-42855384)
chr4 (5-41)||(44125627-44125663)
chr4 (1-41)||(55022465-55022504)
[»] chr8 (23 HSPs)
chr8 (1-43)||(45277001-45277043)
chr8 (4-56)||(7949402-7949454)
chr8 (4-43)||(7535241-7535280)
chr8 (1-48)||(11920177-11920224)
chr8 (1-43)||(5435305-5435347)
chr8 (1-43)||(15048402-15048444)
chr8 (1-43)||(22762516-22762558)
chr8 (4-49)||(22763341-22763386)
chr8 (4-49)||(33296092-33296137)
chr8 (1-41)||(1651976-1652016)
chr8 (1-41)||(1740352-1740392)
chr8 (1-41)||(5434905-5434945)
chr8 (1-41)||(45276602-45276642)
chr8 (4-43)||(11174042-11174081)
chr8 (3-41)||(12643923-12643961)
chr8 (1-43)||(33819788-33819830)
chr8 (4-41)||(1646506-1646543)
chr8 (4-41)||(45077226-45077263)
chr8 (1-41)||(1646911-1646951)
chr8 (1-41)||(1739953-1739993)
chr8 (1-41)||(15048804-15048844)
chr8 (4-40)||(37569320-37569356)
chr8 (3-43)||(40659986-40660026)
[»] chr3 (47 HSPs)
chr3 (1-43)||(12791581-12791623)
chr3 (1-49)||(15791509-15791557)
chr3 (4-43)||(15790682-15790721)
chr3 (1-43)||(10506353-10506395)
chr3 (1-43)||(15986238-15986280)
chr3 (1-43)||(21568749-21568791)
chr3 (1-43)||(26318587-26318629)
chr3 (1-43)||(27801492-27801534)
chr3 (1-43)||(32633470-32633512)
chr3 (1-43)||(44893743-44893785)
chr3 (1-43)||(47669262-47669304)
chr3 (1-43)||(54108307-54108349)
chr3 (5-43)||(54752166-54752204)
chr3 (4-41)||(22202024-22202061)
chr3 (3-43)||(8474253-8474293)
chr3 (1-57)||(11256092-11256148)
chr3 (4-48)||(24428565-24428609)
chr3 (1-49)||(28986546-28986594)
chr3 (1-41)||(39664189-39664229)
chr3 (1-41)||(47669664-47669704)
chr3 (2-41)||(13866025-13866064)
chr3 (1-40)||(21569150-21569189)
chr3 (4-43)||(29818180-29818219)
chr3 (6-41)||(30681827-30681862)
chr3 (9-60)||(41835339-41835390)
chr3 (2-41)||(44317621-44317660)
chr3 (2-41)||(49528154-49528193)
chr3 (1-40)||(54107908-54107947)
chr3 (3-41)||(18464863-18464901)
chr3 (1-43)||(22201619-22201661)
chr3 (3-41)||(27801896-27801934)
chr3 (1-43)||(39241361-39241403)
chr3 (1-43)||(42591787-42591829)
chr3 (1-43)||(45306835-45306877)
chr3 (4-41)||(4773248-4773285)
chr3 (4-37)||(4773650-4773683)
chr3 (4-41)||(10505953-10505990)
chr3 (4-41)||(11256511-11256548)
chr3 (6-43)||(21969632-21969669)
chr3 (6-43)||(21992068-21992105)
chr3 (4-41)||(24428975-24429012)
chr3 (4-41)||(44894148-44894185)
chr3 (1-34)||(47303421-47303454)
chr3 (4-41)||(53716701-53716738)
chr3 (1-49)||(12203956-12204004)
chr3 (1-41)||(16932011-16932051)
chr3 (1-41)||(51509124-51509164)
[»] chr6 (30 HSPs)
chr6 (4-43)||(7438807-7438846)
chr6 (1-48)||(32993420-32993467)
chr6 (1-43)||(26600360-26600402)
chr6 (1-43)||(34518097-34518139)
chr6 (4-49)||(6235918-6235963)
chr6 (1-49)||(2516999-2517047)
chr6 (1-41)||(6137384-6137424)
chr6 (1-41)||(6137782-6137822)
chr6 (1-41)||(10412906-10412946)
chr6 (5-41)||(26957370-26957406)
chr6 (1-41)||(32753578-32753618)
chr6 (5-57)||(34890633-34890685)
chr6 (4-43)||(5310829-5310868)
chr6 (2-41)||(17244669-17244708)
chr6 (1-43)||(5639578-5639620)
chr6 (1-43)||(5938218-5938260)
chr6 (3-41)||(7270360-7270398)
chr6 (1-43)||(15932733-15932775)
chr6 (1-43)||(31237749-31237791)
chr6 (1-43)||(31247119-31247161)
chr6 (4-54)||(35167863-35167913)
chr6 (4-41)||(5937818-5937855)
chr6 (1-41)||(2517407-2517447)
chr6 (5-41)||(9046495-9046531)
chr6 (1-41)||(14276404-14276444)
chr6 (1-49)||(21856960-21857008)
chr6 (5-41)||(24744729-24744765)
chr6 (1-41)||(31238151-31238191)
chr6 (1-41)||(31247521-31247561)
chr6 (1-41)||(35167495-35167535)
[»] scaffold0340 (1 HSPs)
scaffold0340 (5-54)||(18265-18314)
[»] scaffold0221 (2 HSPs)
scaffold0221 (4-49)||(8426-8471)
scaffold0221 (1-34)||(8833-8866)
[»] scaffold0134 (1 HSPs)
scaffold0134 (1-49)||(14540-14588)
[»] scaffold0115 (2 HSPs)
scaffold0115 (1-41)||(22558-22598)
scaffold0115 (4-41)||(21517-21554)
[»] scaffold0032 (1 HSPs)
scaffold0032 (1-56)||(90843-90898)
[»] scaffold0019 (1 HSPs)
scaffold0019 (4-41)||(50481-50518)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-41)||(72767-72807)


Alignment Details
Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 47 - 300
Target Start/End: Complemental strand, 37173785 - 37173529
Alignment:
Q  47 taacttttattatatagatgatgtttgtcaattataatatgcgatttagatcaaattttgctgttaaattgagtttgaacgactatggtgaatagattcc 146  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||    
T  37173785 taacttttattatatagatgatgtttgtcaaatataatatgcgatttagatcaaattttgctgttaaattgagtttgaacgactatgttgaatagatacc 37173686  T
Q  147 caatactactacgagggatgtgtagctcactgagtaaaggaagtaagcaataaatgttcatgactcaaatcctgacaataatagtat--atatgttttat 244  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||||||  |||||||| ||    
T  37173685 caatactactacgagggatgtatagttcactgagtaaaggaagtaaacaataaatattcatgattcgaatcctgacaataatagtatatatatgtttgat 37173586  T
Q  245 agaaatttcattttgaaactta-tttaaatccatatataaattgaaagtaacctttg 300  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37173585 agaaatttcattttgaaacttattttaaatccatatataaattgaaagtaacctttg 37173529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 36440605 - 36440647
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  36440605 tccgataccaattaaatagttagaggaccaaaaagataattta 36440647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24040130 - 24040090
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  24040130 tccgataccaattaaatagttaaaggaccaaaaagataatt 24040090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25183058 - 25183098
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  25183058 tccgataccaattaaatagttagaggaccaaaaaggtaatt 25183098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 32288489 - 32288541
Alignment:
Q  9 caattaaatagttagaagaccaaaaagataatttaccctaacttttattatat 61  Q
    |||||||||||||||| || ||||||| ||||||||||||| |||| ||||||    
T  32288489 caattaaatagttagaggatcaaaaaggtaatttaccctaattttttttatat 32288541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35569820 - 35569780
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  35569820 tccgataccaactaaatagttagaagaccaaaaaggtaatt 35569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38958769 - 38958729
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  38958769 tccgataccaattaaatagttagaggaccaaaaaggtaatt 38958729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38959128 - 38959168
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  38959128 tccgataccaattaaatagttagaggaccaaaaaggtaatt 38959168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 9989368 - 9989321
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||||||||||||||| |||||||||  ||||||| ||||    
T  9989368 tccgataccaattaaatagttagatgaccaaaaaagtaatttagccta 9989321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 16860345 - 16860306
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||| |||||||||||||| ||||||||||||||||||    
T  16860345 gataccgattaaatagttagaggaccaaaaagataattta 16860306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 19184641 - 19184602
Alignment:
Q  2 ccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  19184641 ccgataccaattaaatagttagaggaccaaaaaggtaatt 19184602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 2182988 - 2182946
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  2182988 tccgataccaattaaatagttagaggaccaaaaaattaattta 2182946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 32288119 - 32288083
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||| |||||||||| |||||    
T  32288119 ataccaattaaatagttagaggaccaaaaaggtaatt 32288083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39325457 - 39325417
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||| ||| |||||||||| |||||    
T  39325457 tccgataccaattaaatagtcagaggaccaaaaaggtaatt 39325417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 17032638 - 17032580
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaacttttattat 59  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  17032638 tccgataccaattaaatagttagaggaccaaaaagataatttagcctaagttttattat 17032580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 17050970 - 17050916
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatttaccctaacttttattat 59  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  17050970 ataccaattaaatagttagaggaccaaaaagataatttagcctaaattttattat 17050916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 8174293 - 8174338
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||    
T  8174293 gataccaattaaatagttagaggaccaaaaagataatttagcctaa 8174338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38333085 - 38333125
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  38333085 tccgataccaattaaatagttagaggaccaaaaagataatt 38333125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 47
Target Start/End: Complemental strand, 8962402 - 8962359
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccct 47  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||    
T  8962402 gatactaattaaatagttagaggaccaaaaagataatttaccct 8962359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 24138110 - 24138063
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaact 51  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  24138110 gataccaattaaatagttagaggaccaaaaaggtaatttagcctaact 24138063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41474127 - 41474085
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||||||||||||||||  |||||||    
T  41474127 tccgataccaattaaatagttagaagaccaaaaatgtaattta 41474085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16305430 - 16305470
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  16305430 tccgataccaattaaatagttagaggatcaaaaagataatt 16305470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 41474487 - 41474527
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  41474487 tccgataccaattaaataattagaggaccaaaaagataatt 41474527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 10991893 - 10991854
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  10991893 gataccaattaaatagttagaggaccaaaaaggtaattta 10991854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8445194 - 8445236
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| ||| |||||| |||||||    
T  8445194 tccgataccaattaaatagttagaggacaaaaaaggtaattta 8445236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15744502 - 15744460
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  15744502 tccgataccaactaaatagttagaggaccaaaaaggtaattta 15744460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 19816109 - 19816151
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| || |||||||||| |||||||    
T  19816109 tccgataccaattaaatagtttgaggaccaaaaaggtaattta 19816151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34735748 - 34735790
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  34735748 tccgataccaattaaatagttagaggaccaaaaatgtaattta 34735790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 36713633 - 36713591
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| || ||||||| |||||||    
T  36713633 tccgataccaattaaatagttagaggatcaaaaaggtaattta 36713591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 13193396 - 13193433
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  13193396 gataccaattaaatagttagaggaccaaaaatataatt 13193433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 15405801 - 15405768
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  15405801 tccgataccaattaaatagttagaggaccaaaaa 15405768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24138915 - 24138952
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  24138915 gataccaattaaatagttagaataccaaaaaggtaatt 24138952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 24372375 - 24372420
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||| |||||||||  ||||||| |||||    
T  24372375 gataccaattaaatagttagaggaccaaaaatgtaatttagcctaa 24372420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 29472284 - 29472247
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  29472284 gataccaattaaatagttagaggaccaaaaaggtaatt 29472247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8444867 - 8444827
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||| ||| ||||||||||||||||||||||| |||||    
T  8444867 tccgatatcaactaaatagttagaagaccaaaaaggtaatt 8444827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 13193030 - 13192986
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    ||||||||||||||||||||| |||||||||  ||||||| ||||    
T  13193030 gataccaattaaatagttagaggaccaaaaaagtaatttagccta 13192986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 7579277 - 7579319
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7579277 tccgataccaattaaatagttagaagaccaaaaagataattta 7579319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 8417344 - 8417383
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  8417344 gataccaattaaatagttagaggaccaaaaagataattta 8417383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 8416530 - 8416488
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  8416530 tccgataccaattaaatagttagaggaccaaaaaggtaattta 8416488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 34037320 - 34037358
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  34037320 ataccaattaaatagttagaggaccaaaaagataattta 34037358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Original strand, 35147098 - 35147136
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  35147098 ataccaattaaatagttagaggaccaaaaagataattta 35147136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 4155642 - 4155590
Alignment:
Q  2 ccgataccaattaaatagttagaagaccaaaaagataatttaccctaactttt 54  Q
    ||||||||||||||||||||||| |||||||||| ||||| | ||||| ||||    
T  4155642 ccgataccaattaaatagttagaggaccaaaaaggtaattaagcctaattttt 4155590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6356331 - 6356291
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  6356331 tccgataccaattaaatagttagatgaccaaaaaggtaatt 6356291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 10526353 - 10526309
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||    
T  10526353 gataccaattaaatagttagaggaccaaaaaggtaatttagccta 10526309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10526715 - 10526755
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| ||| ||||||||||||    
T  10526715 tccgataccaattaaatagttagaggacaaaaaagataatt 10526755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 31075602 - 31075638
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  31075602 ataccaattaaatagttagaggaccaaaaagataatt 31075638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 36423809 - 36423853
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||    
T  36423809 ataccaattaaatagttagaggaccaaaaaggtaatttagcctaa 36423853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 6356807 - 6356768
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  6356807 gataccaattaaatagttagaggaccaaaaaggtaattta 6356768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8542544 - 8542497
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    ||||||||||| |||||||||||||||| |||||| ||||||| ||||    
T  8542544 tccgataccaactaaatagttagaagacgaaaaaggtaatttagccta 8542497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 41453410 - 41453457
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| ||||    
T  41453410 tccgataccaactaaatagttagaggaccaaaaaggtaatttaaccta 41453457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 48626471 - 48626510
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  48626471 gataccaattaaatagttagaggaccaaaaaggtaattta 48626510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 1114099 - 1114057
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  1114099 tccgataccaactaaatagttagaggaccaaaaaggtaattta 1114057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 21391595 - 21391637
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  21391595 tccgataccaattaaatagttagatgaccaaaaatgtaattta 21391637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 31638348 - 31638390
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||||||  ||||||||| |||||||    
T  31638348 tccgataccaattaaatagttagagaaccaaaaaggtaattta 31638390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33716633 - 33716591
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  33716633 tccgataccaattaaatagttagaggaccaaaaaactaattta 33716591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 41192090 - 41192132
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  41192090 tccgataccaattaaatagttagaggaccaaaaaagtaattta 41192132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 41892011 - 41891969
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  41892011 tccgataccaattaaatagttagaggaccaaaaaagtaattta 41891969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21391232 - 21391195
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  21391232 gataccaattaaatagttagaggaccaaaaaggtaatt 21391195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 28286159 - 28286122
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  28286159 gataccaactaaatagttagaagaccaaaaatataatt 28286122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 2 - 43
Target Start/End: Original strand, 36674135 - 36674176
Alignment:
Q  2 ccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||| ||| |||||||||| |||||||    
T  36674135 ccgataccaattaaatagtcagaggaccaaaaaggtaattta 36674176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 4931680 - 4931720
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||| |||||||||  |||||||    
T  4931680 cgataccaattaaatagttagaggaccaaaaatgtaattta 4931720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6356690 - 6356730
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||| | |||||||||| |||||    
T  6356690 tccgataccaattaaatagttataggaccaaaaaggtaatt 6356730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8936894 - 8936854
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| ||| ||||||||||||    
T  8936894 tccgataccaactaaatagttagaggactaaaaagataatt 8936854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 41
Target Start/End: Original strand, 38447744 - 38447776
Alignment:
Q  9 caattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||| ||||||||||||||||    
T  38447744 caattaaatagttagaggaccaaaaagataatt 38447776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 49644078 - 49644130
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaacttttat 56  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  49644078 gataccaattaaatagttagaggaccaaaaagataatttagcctaacatttat 49644130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 6798215 - 6798254
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  6798215 gataccaattaaatagttagaagaccaaaaagataattta 6798254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 23598115 - 23598069
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||    
T  23598115 cgataccaattaaatagttagaggaccaaaaagataatttagcctaa 23598069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9006236 - 9006196
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  9006236 tccgataccaattaaatagttagaggaccaaaaagataatt 9006196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9006595 - 9006643
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||| | ||||||||||||||||||||||||||||||||| |||||    
T  9006595 tccgataacgattaaatagttagaagaccaaaaagataatttagcctaa 9006643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 39486243 - 39486199
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  39486243 ataccaattaaatagttagagaaccaaaaagataatttaccctaa 39486199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 49140550 - 49140589
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  49140550 gataccaattaaatagttagaggaccaaaaagataattta 49140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 4696927 - 4696885
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| ||| ||||||||||||||    
T  4696927 tccgataccaattaaatagttagaggactaaaaagataattta 4696885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 35612487 - 35612529
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  35612487 tccgataccaattaaatagttagaggaccaaaaaggtaattta 35612529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37467625 - 37467667
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  37467625 tccgataccaattaaatagttagatgaccaaaaaggtaattta 37467667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 8760317 - 8760277
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  8760317 tccgataccaattaaatagttagaggaccaaaaaggtaatt 8760277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 10831174 - 10831134
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  10831174 cgataccaattaaatagttagaggaccaaaaaggtaattta 10831134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12481464 - 12481512
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| |||||    
T  12481464 tccgataccaactaaatagttagaggaccaaaaaggtaatttagcctaa 12481512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20306047 - 20306007
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  20306047 tccgataccaattaaatagttagaggaccaaaaaggtaatt 20306007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27547714 - 27547674
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||| |||||||||||| |||||    
T  27547714 tccgataccaattaaatagttaaaagaccaaaaaggtaatt 27547674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 34966348 - 34966304
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacc 45  Q
    |||||||||||||||||||||||| | |||||||| |||||||||    
T  34966348 tccgataccaattaaatagttagaggtccaaaaaggtaatttacc 34966304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37304073 - 37304025
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||| |||||| |||||||||| ||||||| |||||    
T  37304073 tccgataccaattaaatggttagaggaccaaaaaggtaatttagcctaa 37304025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38000534 - 38000494
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  38000534 tccgataccaattaaatagttagaggaccaaaaaggtaatt 38000494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44323065 - 44323105
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  44323065 tccgataccaattaaatagttagaggaccaaaaaggtaatt 44323105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 46593635 - 46593683
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    |||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  46593635 tccgataccaattaaatagttagaggaccaaaaaagtaatttagcctaa 46593683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 1763082 - 1763121
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  1763082 gataccaattaaatagttagaggaccaaaaaggtaattta 1763121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 5537209 - 5537256
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    ||||||||| |||||||||||||| ||||||||| |||||||| ||||    
T  5537209 tccgataccgattaaatagttagaggaccaaaaatataatttaaccta 5537256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 25995826 - 25995787
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  25995826 gataccaattaaatagttagaggaccaaaaaggtaattta 25995787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 37304433 - 37304480
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||    
T  37304433 tccgataccaattaaatagttagagggccaaaaaaataatttaaccta 37304480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 8762804 - 8762846
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  8762804 tccgataccaattaaatagttagatgaccaaaaatgtaattta 8762846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 16023942 - 16023900
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  16023942 tccgataccaattaaatagttagaggaccaaaaaagtaattta 16023900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23476746 - 23476788
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  23476746 tccgataccaattaaatagttagaggaccaaaaatgtaattta 23476788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 37586098 - 37586140
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||    
T  37586098 tccgataccaattaagtagttagatgacaaaaaagataattta 37586140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 1762719 - 1762686
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  1762719 tccgataccaattaaatagttagaggaccaaaaa 1762686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 16024302 - 16024335
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  16024302 tccgataccaattaaatagttagaggaccaaaaa 16024335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 45052732 - 45052695
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  45052732 gataccaattaaatagtttgaagatcaaaaagataatt 45052695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 46289366 - 46289329
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| || |||||||||||||    
T  46289366 gataccaattaaatagttagaggatcaaaaagataatt 46289329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 49140185 - 49140148
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||| |||||||||||| ||||||||||||||||    
T  49140185 gataccaactaaatagttagaggaccaaaaagataatt 49140148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49643716 - 49643683
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  49643716 tccgataccaattaaatagttagaggaccaaaaa 49643683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2064616 - 2064664
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    |||||||||||||||||||||||| || ||||||  ||||||| |||||    
T  2064616 tccgataccaattaaatagttagaggatcaaaaatgtaatttagcctaa 2064664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12127102 - 12127062
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  12127102 tccgataccaactaaatagttagaggaccaaaaaggtaatt 12127062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 26723209 - 26723253
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    ||||||||||||||||||||| || ||||||| ||||||| ||||    
T  26723209 gataccaattaaatagttagaggatcaaaaaggtaatttagccta 26723253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35612127 - 35612087
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||| ||||| |||||||||| |||||    
T  35612127 tccgataccaattaaatacttagaggaccaaaaaggtaatt 35612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 44991683 - 44991730
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  44991683 tccgataccaattaaatagttagaggaccaaaaagataatttagccta 44991730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 47602988 - 47602941
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||    
T  47602988 tccgataccaattaaatagttagaggaccaaaaagataatttagccta 47602941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 15478050 - 15478092
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  15478050 tccgataccaattaaatagttagaagaccaaaaaggtaattta 15478092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 43566420 - 43566383
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43566420 gataccaattaaatagttagaagaccaaaaagataatt 43566383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 25182220 - 25182259
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  25182220 gataccaactaaatagttagaagaccaaaaagataattta 25182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 52557495 - 52557534
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  52557495 gataccaattaaatagttagaggaccaaaaagataattta 52557534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 53259546 - 53259585
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  53259546 gataccaattaaatagttagaggaccaaaaagataattta 53259585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 39448893 - 39448935
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  39448893 tccgataccaattaaatagttagaggaccaaaaaggtaattta 39448935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 47603769 - 47603814
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||    
T  47603769 gataccaattaaatagttagaggaccaaaaaggtaatttagcctaa 47603814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 53995342 - 53995387
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||||||||||||| |||||||||| ||||||| ||||    
T  53995342 cgataccaattaaatagttagaggaccaaaaaggtaatttagccta 53995387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4513321 - 4513369
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||| |||||||||||| |||||||||| ||||||| |||||    
T  4513321 tccgataccaactaaatagttagaggaccaaaaaggtaatttagcctaa 4513369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12817851 - 12817803
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||||||  ||||||||| ||||||| |||||    
T  12817851 tccgataccaattaaatagttagagaaccaaaaaggtaatttagcctaa 12817803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 15477690 - 15477650
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  15477690 tccgataccaattaaatagttagaggaccaaaaaggtaatt 15477650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19088386 - 19088346
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  19088386 tccgataccaactaaatagttagaggaccaaaaagataatt 19088346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 19088749 - 19088801
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaacttttat 56  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||| | ||||||    
T  19088749 gataccaattaaatagttagaggaccaaaaaggtaatttagccttatttttat 19088801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21763225 - 21763185
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  21763225 tccgataccaattaaataattagaggaccaaaaagataatt 21763185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38339897 - 38339937
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  38339897 tccgataccaattaaatagttagaggaccaaaaaggtaatt 38339937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44991324 - 44991284
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  44991324 tccgataccaattaaatagttagaggaccaaaaaggtaatt 44991284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 50508865 - 50508909
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||||    
T  50508865 gataccaattaaataattagaaaaccaaaaagataatttagccta 50508909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 50769226 - 50769266
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  50769226 tccgataccaattaaatagttagaggaccaaaaaggtaatt 50769266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 23756205 - 23756263
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccct--aacttttatt 57  Q
    |||||||||||||||||||||||| |||||||||  ||||||| |||  ||||||||||    
T  23756205 tccgataccaattaaatagttagaggaccaaaaatgtaatttaaccttaaacttttatt 23756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 24898234 - 24898187
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||||||||||||||| |||||||||  ||||||| ||||    
T  24898234 tccgataccaattaaatagttagaggaccaaaaatgtaatttaaccta 24898187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 44957434 - 44957387
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||| ||||||||||| ||||||||| |||||||| ||||    
T  44957434 tccgataccaataaaatagttagaggaccaaaaatataatttagccta 44957387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 46850077 - 46850116
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  46850077 gataccaatttaatagttagatgaccaaaaagataattta 46850116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 52692066 - 52692027
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| || |||||||||||||||    
T  52692066 gataccaattaaatagttagaggatcaaaaagataattta 52692027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 53751310 - 53751349
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  53751310 gataccaattaaatagttagaggaccaaaaaggtaattta 53751349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 55022326 - 55022287
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  55022326 gataccaattaaatagttagaggaccaaaaaggtaattta 55022287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 12818211 - 12818249
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataa 39  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  12818211 tccgataccaattaaataattagaggaccaaaaagataa 12818249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 14985372 - 14985334
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  14985372 ataccaattaaatagttagaggaccaaaaaggtaattta 14985334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 30683933 - 30683975
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||| ||||| ||||||||| ||||||||    
T  30683933 tccgataccaattaaatatttagaggaccaaaaatataattta 30683975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 39448531 - 39448493
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||| ||||||| ||||||||    
T  39448531 cgataccaattaaatagttagaggaccaaacagataatt 39448493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 52557130 - 52557092
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  52557130 cgataccaattaaatagttagaggaccaaaaaggtaatt 52557092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 6712005 - 6711960
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||| | ||||||| |||||||| |||||    
T  6712005 gataccaattaaatagttagagggccaaaaatataatttagcctaa 6711960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25269405 - 25269438
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  25269405 tccgataccaattaaatagttagaggaccaaaaa 25269438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 30683568 - 30683531
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  30683568 gataccaattaaatagttagaggaccaaaaaggtaatt 30683531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 43734328 - 43734291
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  43734328 gataccaattaaatagttagaggaccaaaaaggtaatt 43734291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 1433312 - 1433276
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  1433312 ataccaatgaaatagttagaggaccaaaaagataatt 1433276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 1433679 - 1433723
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    ||||||||||||||||||||| |||||||||  ||||||| ||||    
T  1433679 gataccaattaaatagttagaggaccaaaaatgtaatttagccta 1433723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 16038202 - 16038246
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||| |||||||||||| |||||||||| ||||||| ||||    
T  16038202 gataccaactaaatagttagaggaccaaaaaggtaatttagccta 16038246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 41752221 - 41752253
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaa 33  Q
    |||||||||||||||||||||||| ||||||||    
T  41752221 tccgataccaattaaatagttagaggaccaaaa 41752253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42855384 - 42855344
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  42855384 tccgataccaactaaatagttagaggaccaaaaaggtaatt 42855344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 44125663 - 44125627
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||| | ||||||||||||||||    
T  44125663 ataccaattaaatagttaaaggaccaaaaagataatt 44125627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 55022465 - 55022504
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  55022465 tccgataccaattaaatagttagagga-caaaaagataatt 55022504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 45277001 - 45277043
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  45277001 tccgataccaattaaatagttagaggaccaaaaagataattta 45277043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 7949454 - 7949402
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaacttttat 56  Q
    ||||||||||||||||||||| |||||||||||||||||| ||| | ||||||    
T  7949454 gataccaattaaatagttagaggaccaaaaagataatttaaccttatttttat 7949402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 7535241 - 7535280
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7535241 gataccaattaaatagttagaggaccaaaaagataattta 7535280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 11920177 - 11920224
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||||    
T  11920177 tccgataccaattaaatagttagatgaccaaaaaggtaatttagccta 11920224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5435305 - 5435347
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||| ||||||||| ||||||||||||||||||    
T  5435305 tccgataccaattatatagttagaggaccaaaaagataattta 5435347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15048444 - 15048402
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  15048444 tccgataccaattaaatagttagaggaccaaaaaggtaattta 15048402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22762558 - 22762516
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  22762558 tccgataccaattaaatagttagatgaccaaaaatataattta 22762516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 22763341 - 22763386
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||    
T  22763341 gataccaattaaatagttagaggaccaaaaaggtaatttagcctaa 22763386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 33296092 - 33296137
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||    
T  33296092 gataccaattaaatagttagaggaccaaaaaggtaatttagcctaa 33296137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1651976 - 1652016
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  1651976 tccgataccaattaaatagttagaggaccaaaaaggtaatt 1652016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1740352 - 1740392
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  1740352 tccgataccaattaaatagttagaggaccaaaaaggtaatt 1740392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5434945 - 5434905
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  5434945 tccgataccaattaaatagttagaggaccaaaaaggtaatt 5434905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 45276642 - 45276602
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  45276642 tccgataccaactaaatagttagaggaccaaaaagataatt 45276602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 11174042 - 11174081
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  11174042 gataccaattaaatagttagaggaccaaaaaggtaattta 11174081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 12643923 - 12643961
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||| ||||||||||||||| ||||||||||||||||    
T  12643923 cgatacaaattaaatagttagaggaccaaaaagataatt 12643961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 33819830 - 33819788
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  33819830 tccgataccaattaaataattagaggaccaaaaaggtaattta 33819788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 1646543 - 1646506
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  1646543 gataccaattaaatagttagaggaccaaaaaggtaatt 1646506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 45077263 - 45077226
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  45077263 gataccaattaaatagttagaggaccaaaaaggtaatt 45077226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1646911 - 1646951
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| ||| |||||| |||||    
T  1646911 tccgataccaattaaatagttagaggacgaaaaaggtaatt 1646951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 1739993 - 1739953
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||| |||||||||||||| |||||||||| |||||    
T  1739993 tccgataccgattaaatagttagaggaccaaaaaggtaatt 1739953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15048804 - 15048844
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  15048804 tccgataccaactaaatagttagaggaccaaaaaggtaatt 15048844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 37569356 - 37569320
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataat 40  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  37569356 gataccaattaaatagttagaggaccaaaaaggtaat 37569320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 43
Target Start/End: Complemental strand, 40660026 - 40659986
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||| |||||||||  |||||||    
T  40660026 cgataccaattaaatagttagaggaccaaaaaagtaattta 40659986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12791581 - 12791623
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  12791581 tccgataccaattaaatagttagaggaccaaaaagataattta 12791623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15791509 - 15791557
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    |||||||||||||||||||||||| ||||||||| |||||||| |||||    
T  15791509 tccgataccaattaaatagttagaggaccaaaaatataatttagcctaa 15791557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 15790721 - 15790682
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  15790721 gataccaattaaatagttagatgaccaaaaagataattta 15790682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 10506353 - 10506395
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  10506353 tccgataccaattaaatagttagaggaccaaaaaggtaattta 10506395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15986280 - 15986238
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  15986280 tccgataccaattaaatagttagaggatcaaaaagataattta 15986238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21568791 - 21568749
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| || |||||||||||||||    
T  21568791 tccgataccaattaaatagttagaggatcaaaaagataattta 21568749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 26318587 - 26318629
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  26318587 tccgataccaattaaatagttagatgaccaaaaaggtaattta 26318629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 27801534 - 27801492
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| ||||||||| ||||||||    
T  27801534 tccgataccaattaaatagttagaggaccaaaaatataattta 27801492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 32633470 - 32633512
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||| |||||||||||||||| ||||||||||||||||||    
T  32633470 tccgataacaattaaatagttagaggaccaaaaagataattta 32633512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 44893785 - 44893743
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  44893785 tccgataccaattaaatagttagagaaccaaaaagataattta 44893743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 47669304 - 47669262
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  47669304 tccgataccaattaaatagttagaggaccaaaaaggtaattta 47669262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 54108307 - 54108349
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  54108307 tccgataccaattaaatagttagaggaccaaaaaggtaattta 54108349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 43
Target Start/End: Complemental strand, 54752204 - 54752166
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  54752204 ataccaattaaatagttagaggaccaaaaagataattta 54752166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 22202024 - 22202061
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22202024 gataccaattaaatagttagaggaccaaaaagataatt 22202061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 8474253 - 8474293
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||| |||||||||| |||||||    
T  8474253 cgataccaattaaatagttagaggaccaaaaaggtaattta 8474293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 11256148 - 11256092
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaacttttatt 57  Q
    |||||||||||||||||||||||| ||| |||||| ||||| | ||||| |||||||    
T  11256148 tccgataccaattaaatagttagaggactaaaaaggtaattaagcctaatttttatt 11256092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Complemental strand, 24428609 - 24428565
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||    
T  24428609 gataccaattgaatagttagaggaccaaaaagataatttagccta 24428565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28986546 - 28986594
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||||    
T  28986546 tccgataccaattaaataattagaggaccaaaaaggtaatttagcctaa 28986594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39664229 - 39664189
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  39664229 tccgataccaattaaatagttagaggaccaaaaaggtaatt 39664189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 47669664 - 47669704
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  47669664 tccgataccaaataaatagttagaggaccaaaaagataatt 47669704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 13866064 - 13866025
Alignment:
Q  2 ccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  13866064 ccgataccaattaaatagttagaggaccaaaaaggtaatt 13866025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 21569150 - 21569189
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataat 40  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  21569150 tccgataccaattaaatagttagaggaccaaaaaggtaat 21569189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 29818219 - 29818180
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| |||||||||| |||||||    
T  29818219 gataccaattaaatagttagaggaccaaaaaggtaattta 29818180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 30681827 - 30681862
Alignment:
Q  6 taccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||| ||||||||||||||||    
T  30681827 taccaattaaatagttagaggaccaaaaagataatt 30681862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 41835339 - 41835390
Alignment:
Q  9 caattaaatagttagaagaccaaaaagataatttaccctaacttttattata 60  Q
    |||||||||||||||| |||||||||| ||||||| ||||| ||| ||||||    
T  41835339 caattaaatagttagaggaccaaaaaggtaatttaacctaaatttaattata 41835390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 41
Target Start/End: Original strand, 44317621 - 44317660
Alignment:
Q  2 ccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  44317621 ccgataccaattaaatagttagaggaccaaaaaggtaatt 44317660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 49528193 - 49528154
Alignment:
Q  2 ccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  49528193 ccgataccaattaaatagttagaggaccaaaaaggtaatt 49528154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 54107947 - 54107908
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataat 40  Q
    |||||||||||||||||||||||| |||||||||| ||||    
T  54107947 tccgataccaattaaatagttagatgaccaaaaaggtaat 54107908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 18464863 - 18464901
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  18464863 cgataccaattaaatagttagaggaccaaaaaggtaatt 18464901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 22201661 - 22201619
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  22201661 tccgataccaattaaatagttagaggaccaaaaatgtaattta 22201619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 27801896 - 27801934
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||| |||||||||| |||||    
T  27801896 cgataccaattaaatagttagaggaccaaaaaggtaatt 27801934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39241403 - 39241361
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  39241403 tccgataccaattaaatagttagaggaccaaaaatgtaattta 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42591829 - 42591787
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||| |||||||||||||| |||||||||| |||||||    
T  42591829 tccgataccgattaaatagttagaggaccaaaaaggtaattta 42591787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 45306877 - 45306835
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| || ||||||| |||||||    
T  45306877 tccgataccaattaaatagttagaggatcaaaaaggtaattta 45306835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 4773285 - 4773248
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  4773285 gataccaattaaatagttagaggaccaaaaaggtaatt 4773248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 37
Target Start/End: Original strand, 4773650 - 4773683
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagat 37  Q
    ||||||||||||||||||||| ||||||||||||    
T  4773650 gataccaattaaatagttagaggaccaaaaagat 4773683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 10505990 - 10505953
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  10505990 gataccaattaaatagttagaggaccaaaaaggtaatt 10505953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 11256511 - 11256548
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  11256511 gataccaattaaatagttagaggaccaaaaaggtaatt 11256548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 21969669 - 21969632
Alignment:
Q  6 taccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  21969669 taccaattaaatagttagaggaccaaaaaggtaattta 21969632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 43
Target Start/End: Complemental strand, 21992105 - 21992068
Alignment:
Q  6 taccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||| |||||||||| |||||||    
T  21992105 taccaattaaatagttagaggaccaaaaaggtaattta 21992068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24428975 - 24429012
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  24428975 gataccaattaaatagttagatgaccaaaaaggtaatt 24429012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 44894148 - 44894185
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  44894148 gataccaattaaatagttagaggaccaaaaaggtaatt 44894185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47303421 - 47303454
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  47303421 tccgataccaattaaatagttagaggaccaaaaa 47303454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 53716701 - 53716738
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  53716701 gataccaattaaatagttagatgaccaaaaaggtaatt 53716738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12203956 - 12204004
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    |||||||||||||||||||||||  |||||||| | ||||||| |||||    
T  12203956 tccgataccaattaaatagttaggggaccaaaacggtaatttaacctaa 12204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 16932011 - 16932051
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||| ||||||| |||||||||| |||||    
T  16932011 tccgataccaattaaaaagttagaggaccaaaaaggtaatt 16932051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 51509164 - 51509124
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  51509164 tccgataccaactaaatagttagaggaccaaaaaggtaatt 51509124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 7438846 - 7438807
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7438846 gataccaattaaatagttagaggaccaaaaagataattta 7438807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 32993420 - 32993467
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttacccta 48  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||    
T  32993420 tccgataccaattaaatagttagaggaccaaaaatataatttagccta 32993467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 26600402 - 26600360
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  26600402 tccgataccaatttaatagttagaggaccaaaaagataattta 26600360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34518097 - 34518139
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||| |||||||    
T  34518097 tccgataccaattaaatagttagaggaccaaaaaggtaattta 34518139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 6235963 - 6235918
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||    
T  6235963 gataccaattaaatagttagaggaccaaaaaggtaatttagcctaa 6235918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2517047 - 2516999
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    |||||||||||||||||||||||| |||||||||  ||||||| |||||    
T  2517047 tccgataccaattaaatagttagaggaccaaaaatgtaatttaacctaa 2516999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6137424 - 6137384
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  6137424 tccgataccaattaaatagttagaggaccaaaaaggtaatt 6137384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 6137782 - 6137822
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  6137782 tccgataccaattaaatagttagaggaccaaaaaggtaatt 6137822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10412906 - 10412946
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||| ||||||||||||||||||    
T  10412906 tccgataccaactaaatagttaaaagaccaaaaagataatt 10412946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 26957370 - 26957406
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||| ||||||||||||||||    
T  26957370 ataccaattaaatagttagatgaccaaaaagataatt 26957406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32753578 - 32753618
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  32753578 tccgataccaattaaatagttagaggaccaaaaaggtaatt 32753618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 34890685 - 34890633
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatttaccctaacttttatt 57  Q
    |||||||||||||||||||| || ||||||| ||||||| ||||| |||||||    
T  34890685 ataccaattaaatagttagaggaacaaaaaggtaatttagcctaaattttatt 34890633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 4 - 43
Target Start/End: Complemental strand, 5310868 - 5310829
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||| |||||||||||||||| ||||||||||||||||||    
T  5310868 gatatcaattaaatagttagaggaccaaaaagataattta 5310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 17244708 - 17244669
Alignment:
Q  2 ccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  17244708 ccgataccaattaaatagttagaggaccaaaaaggtaatt 17244669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5639578 - 5639620
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||||||||||||||||||| ||||||  |||||||    
T  5639578 tccgataccaattaaatagttagaagatcaaaaatgtaattta 5639620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5938218 - 5938260
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  5938218 tccgataccaattaaataattagatgaccaaaaaggtaattta 5938260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 7270360 - 7270398
Alignment:
Q  3 cgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||| | ||||||||||||||||    
T  7270360 cgataccaattaaatagttaaaggaccaaaaagataatt 7270398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 15932775 - 15932733
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    ||||||||||| |||||||||||| |||||||||| |||||||    
T  15932775 tccgataccaactaaatagttagaggaccaaaaaggtaattta 15932733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31237791 - 31237749
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  31237791 tccgataccaattaaatagttagaggaccaaaaaagtaattta 31237749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 31247161 - 31247119
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataattta 43  Q
    |||||||||||||||||||||||| |||||||||  |||||||    
T  31247161 tccgataccaattaaatagttagaggaccaaaaaagtaattta 31247119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 35167863 - 35167913
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaactttt 54  Q
    ||||||||||||||||||||| |||||||||  ||||||| ||||| ||||    
T  35167863 gataccaattaaatagttagaggaccaaaaatgtaatttagcctaattttt 35167913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 5937855 - 5937818
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  5937855 gataccaattaaatagttagaggaccaaaaaggtaatt 5937818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2517407 - 2517447
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  2517407 tccgataccaactaaatagttagaggaccaaaaaggtaatt 2517447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 9046495 - 9046531
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||| |||||||||| |||||    
T  9046495 ataccaattaaatagttagaggaccaaaaaggtaatt 9046531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14276444 - 14276404
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||| |||| |||||||||| |||||    
T  14276444 tccgataccaattaaataggtagaggaccaaaaaggtaatt 14276404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21856960 - 21857008
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||| |||||| ||||| |||||||||| ||||||| |||||    
T  21856960 tccgataccaactaaatacttagaggaccaaaaaggtaatttagcctaa 21857008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 24744729 - 24744765
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  24744729 ataccaactaaatagttagaggaccaaaaagataatt 24744765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31238151 - 31238191
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  31238151 tccgataccaactaaatagttagaggaccaaaaaggtaatt 31238191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31247521 - 31247561
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  31247521 tccgataccaactaaatagttagaggaccaaaaaggtaatt 31247561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35167535 - 35167495
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  35167535 tccgataccaactaaatagttagaggaccaaaaaggtaatt 35167495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 18314 - 18265
Alignment:
Q  5 ataccaattaaatagttagaagaccaaaaagataatttaccctaactttt 54  Q
    |||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  18314 ataccaattaaatagttagaggaccaaaaatataatttagcataactttt 18265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 8471 - 8426
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||||||||||||||||| |||||||||| ||||||| |||||    
T  8471 gataccaattaaatagttagaggaccaaaaaggtaatttagcctaa 8426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 8833 - 8866
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaa 34  Q
    |||||||||||||||||||||||| |||||||||    
T  8833 tccgataccaattaaatagttagaggaccaaaaa 8866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14540 - 14588
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaa 49  Q
    ||||||| |||||||||||||||| |||||||||| ||||||| |||||    
T  14540 tccgatatcaattaaatagttagaggaccaaaaaggtaatttagcctaa 14588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22558 - 22598
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  22558 tccgataccaattaaatagttagaggaccaaaaaggtaatt 22598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 21554 - 21517
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||||||||||||| |||||||||| |||||    
T  21554 gataccaattaaatagttagaggaccaaaaaggtaatt 21517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 90843 - 90898
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatttaccctaacttttat 56  Q
    ||||||||||| |||||||||||| ||| ||||| |||||||| |||||| |||||    
T  90843 tccgataccaactaaatagttagaggacgaaaaatataatttaacctaacatttat 90898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 50518 - 50481
Alignment:
Q  4 gataccaattaaatagttagaagaccaaaaagataatt 41  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  50518 gataccaattaaataggtagaggaccaaaaagataatt 50481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 72807 - 72767
Alignment:
Q  1 tccgataccaattaaatagttagaagaccaaaaagataatt 41  Q
    ||||||||||| |||||||||||| |||||||||| |||||    
T  72807 tccgataccaactaaatagttagaggaccaaaaaggtaatt 72767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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