View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10004_7 (Length: 332)

Name: NF10004_7
Description: NF10004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10004_7
NF10004_7
[»] chr5 (91 HSPs)
chr5 (13-332)||(6326226-6326552)
chr5 (39-175)||(6247590-6247730)
chr5 (79-175)||(21191051-21191147)
chr5 (84-202)||(21522691-21522809)
chr5 (84-202)||(21533257-21533375)
chr5 (84-175)||(19579669-19579760)
chr5 (40-173)||(24906252-24906390)
chr5 (99-182)||(22013375-22013458)
chr5 (49-200)||(17176991-17177139)
chr5 (83-200)||(15382420-15382539)
chr5 (79-163)||(21576740-21576824)
chr5 (84-160)||(39698524-39698600)
chr5 (84-175)||(13287399-13287490)
chr5 (85-200)||(36642763-36642877)
chr5 (79-200)||(6770486-6770605)
chr5 (78-182)||(19820390-19820492)
chr5 (91-163)||(14674249-14674321)
chr5 (84-175)||(37328844-37328935)
chr5 (34-159)||(10298553-10298675)
chr5 (42-178)||(16203746-16203889)
chr5 (206-264)||(6316994-6317052)
chr5 (40-148)||(15883982-15884096)
chr5 (103-173)||(19552562-19552632)
chr5 (91-157)||(31084309-31084375)
chr5 (272-327)||(6317164-6317219)
chr5 (101-168)||(15410465-15410532)
chr5 (84-175)||(21541998-21542089)
chr5 (79-154)||(33178014-33178089)
chr5 (79-158)||(42893345-42893424)
chr5 (92-163)||(43001780-43001851)
chr5 (105-175)||(21137657-21137727)
chr5 (79-181)||(26312731-26312833)
chr5 (98-148)||(27932230-27932280)
chr5 (84-170)||(41633708-41633794)
chr5 (99-197)||(41995417-41995515)
chr5 (101-175)||(42469189-42469263)
chr5 (39-89)||(43564951-43565001)
chr5 (79-148)||(28588669-28588738)
chr5 (39-146)||(38464312-38464426)
chr5 (99-158)||(3966488-3966547)
chr5 (92-172)||(4105228-4105310)
chr5 (39-82)||(14873599-14873642)
chr5 (108-175)||(41558707-41558774)
chr5 (101-199)||(26205777-26205875)
chr5 (84-145)||(7677703-7677764)
chr5 (79-156)||(7997162-7997238)
chr5 (79-136)||(21194200-21194257)
chr5 (85-158)||(21351906-21351979)
chr5 (99-143)||(6471904-6471948)
chr5 (99-170)||(14422877-14422946)
chr5 (111-199)||(17122993-17123080)
chr5 (40-88)||(19820328-19820376)
chr5 (99-143)||(24273045-24273089)
chr5 (99-143)||(24389125-24389169)
chr5 (79-175)||(30502383-30502479)
chr5 (79-175)||(30542726-30542822)
chr5 (88-175)||(22299485-22299571)
chr5 (101-132)||(31264449-31264480)
chr5 (40-163)||(34879330-34879452)
chr5 (40-83)||(39698628-39698671)
chr5 (84-131)||(41558654-41558701)
chr5 (78-132)||(2548398-2548452)
chr5 (99-157)||(6035469-6035526)
chr5 (39-69)||(7218217-7218247)
chr5 (102-164)||(9449448-9449510)
chr5 (40-74)||(17123132-17123166)
chr5 (101-163)||(19168838-19168900)
chr5 (99-137)||(21194138-21194176)
chr5 (40-74)||(21576685-21576719)
chr5 (40-74)||(22423764-22423798)
chr5 (85-170)||(30135286-30135372)
chr5 (40-74)||(35017128-35017162)
chr5 (43-89)||(39268541-39268587)
chr5 (101-135)||(43208291-43208325)
chr5 (48-89)||(17088361-17088402)
chr5 (99-132)||(25863215-25863248)
chr5 (109-170)||(26716117-26716178)
chr5 (109-170)||(26985857-26985918)
chr5 (79-163)||(43564863-43564945)
chr5 (101-145)||(2577197-2577241)
chr5 (99-175)||(6401466-6401542)
chr5 (40-88)||(7677787-7677835)
chr5 (39-83)||(15086554-15086598)
chr5 (100-132)||(19438354-19438386)
chr5 (42-74)||(21190998-21191030)
chr5 (40-88)||(21194063-21194111)
chr5 (99-167)||(22423827-22423895)
chr5 (99-159)||(30098310-30098370)
chr5 (39-79)||(39758340-39758380)
chr5 (99-143)||(41091272-41091316)
chr5 (42-74)||(43001890-43001922)
[»] chr6 (109 HSPs)
chr6 (40-200)||(7938059-7938219)
chr6 (84-198)||(16766642-16766756)
chr6 (84-170)||(12696297-12696383)
chr6 (79-175)||(34595102-34595198)
chr6 (39-199)||(426477-426629)
chr6 (79-175)||(7977825-7977921)
chr6 (79-199)||(8776968-8777088)
chr6 (84-200)||(9107370-9107486)
chr6 (40-199)||(9027122-9027286)
chr6 (84-182)||(8365519-8365617)
chr6 (41-170)||(31959132-31959268)
chr6 (43-143)||(9025448-9025553)
chr6 (82-182)||(853857-853957)
chr6 (79-163)||(17841584-17841668)
chr6 (79-163)||(28152079-28152162)
chr6 (40-178)||(6389708-6389851)
chr6 (99-182)||(9658841-9658923)
chr6 (84-170)||(10770674-10770760)
chr6 (59-148)||(21924910-21924999)
chr6 (86-170)||(16833281-16833365)
chr6 (86-170)||(17435172-17435256)
chr6 (99-182)||(3398580-3398662)
chr6 (40-175)||(5732474-5732601)
chr6 (91-200)||(1681701-1681810)
chr6 (99-200)||(34290092-34290193)
chr6 (79-159)||(7265588-7265668)
chr6 (99-167)||(13851712-13851780)
chr6 (79-143)||(28715295-28715359)
chr6 (99-181)||(6665177-6665257)
chr6 (99-178)||(9629348-9629427)
chr6 (79-154)||(19040341-19040416)
chr6 (99-181)||(7996393-7996475)
chr6 (99-181)||(8022326-8022408)
chr6 (84-178)||(21395308-21395401)
chr6 (83-175)||(3209350-3209442)
chr6 (39-199)||(8805523-8805687)
chr6 (89-166)||(17341669-17341746)
chr6 (99-175)||(13360387-13360463)
chr6 (99-175)||(34073362-34073438)
chr6 (41-132)||(1700363-1700454)
chr6 (98-200)||(5970122-5970218)
chr6 (79-170)||(6898276-6898367)
chr6 (104-175)||(10339146-10339217)
chr6 (84-182)||(7930266-7930364)
chr6 (79-167)||(4877918-4878007)
chr6 (83-148)||(7801155-7801220)
chr6 (99-180)||(30866159-30866240)
chr6 (79-184)||(33001284-33001388)
chr6 (84-172)||(17327655-17327743)
chr6 (99-199)||(18367781-18367880)
chr6 (99-175)||(19044432-19044508)
chr6 (84-132)||(31384931-31384979)
chr6 (79-170)||(31579222-31579311)
chr6 (100-175)||(5000642-5000717)
chr6 (39-168)||(7086770-7086905)
chr6 (85-168)||(15489733-15489816)
chr6 (99-174)||(1532207-1532284)
chr6 (39-89)||(17327589-17327639)
chr6 (99-161)||(26562671-26562733)
chr6 (79-148)||(32978894-32978964)
chr6 (80-129)||(6751878-6751927)
chr6 (99-148)||(8931617-8931666)
chr6 (113-182)||(10649289-10649358)
chr6 (39-88)||(12868615-12868664)
chr6 (79-168)||(23771554-23771642)
chr6 (91-147)||(1191707-1191763)
chr6 (99-175)||(7625090-7625166)
chr6 (79-175)||(7740610-7740705)
chr6 (99-199)||(10294051-10294151)
chr6 (99-163)||(20371125-20371189)
chr6 (79-123)||(26402675-26402719)
chr6 (39-83)||(28715371-28715415)
chr6 (40-80)||(32839571-32839611)
chr6 (39-74)||(4878027-4878062)
chr6 (40-83)||(7378055-7378098)
chr6 (99-142)||(7569183-7569226)
chr6 (40-75)||(7723199-7723234)
chr6 (101-132)||(34446576-34446607)
chr6 (40-83)||(34595210-34595253)
chr6 (79-145)||(7377977-7378043)
chr6 (39-89)||(8365447-8365497)
chr6 (43-89)||(8389411-8389457)
chr6 (40-90)||(19294694-19294744)
chr6 (40-82)||(21424744-21424786)
chr6 (79-132)||(403859-403912)
chr6 (42-83)||(5569825-5569866)
chr6 (40-89)||(7248439-7248488)
chr6 (40-89)||(7625186-7625235)
chr6 (40-89)||(9107299-9107348)
chr6 (99-132)||(9195769-9195802)
chr6 (41-89)||(9658949-9658998)
chr6 (39-88)||(10339053-10339102)
chr6 (40-89)||(16766778-16766827)
chr6 (101-170)||(17168480-17168549)
chr6 (41-74)||(17841530-17841563)
chr6 (84-129)||(19369831-19369876)
chr6 (41-82)||(31385007-31385048)
chr6 (82-143)||(32511664-32511725)
chr6 (99-175)||(2153902-2153978)
chr6 (98-162)||(2224207-2224271)
chr6 (84-140)||(7112781-7112837)
chr6 (84-140)||(8781308-8781364)
chr6 (84-132)||(9024176-9024224)
chr6 (113-161)||(10760870-10760918)
chr6 (99-131)||(11591885-11591917)
chr6 (79-115)||(16388212-16388248)
chr6 (99-163)||(16388248-16388311)
chr6 (112-160)||(19147431-19147479)
chr6 (40-88)||(32511606-32511654)
[»] chr4 (96 HSPs)
chr4 (79-200)||(23292981-23293102)
chr4 (39-163)||(30298926-30299049)
chr4 (39-163)||(30327794-30327917)
chr4 (99-199)||(36635268-36635368)
chr4 (80-175)||(21945471-21945566)
chr4 (40-199)||(10499227-10499383)
chr4 (42-168)||(22440559-22440684)
chr4 (40-143)||(37203264-37203371)
chr4 (79-199)||(12895269-12895389)
chr4 (92-200)||(19482611-19482719)
chr4 (99-175)||(24343475-24343551)
chr4 (79-170)||(49430998-49431090)
chr4 (79-170)||(12797333-12797423)
chr4 (39-199)||(20633429-20633591)
chr4 (84-170)||(3947766-3947852)
chr4 (84-181)||(28084483-28084581)
chr4 (38-106)||(30094066-30094134)
chr4 (79-175)||(35157980-35158076)
chr4 (39-157)||(11596296-11596425)
chr4 (90-197)||(14126117-14126224)
chr4 (85-171)||(847923-848009)
chr4 (92-170)||(40481610-40481687)
chr4 (84-169)||(16303266-16303351)
chr4 (79-167)||(2361970-2362058)
chr4 (99-175)||(5414187-5414263)
chr4 (104-168)||(7012041-7012105)
chr4 (41-132)||(17425348-17425437)
chr4 (79-143)||(28964243-28964307)
chr4 (101-156)||(20743295-20743350)
chr4 (84-175)||(27706177-27706268)
chr4 (79-170)||(34306799-34306889)
chr4 (82-145)||(38847010-38847073)
chr4 (79-145)||(8423713-8423779)
chr4 (42-131)||(16189721-16189813)
chr4 (40-82)||(35157925-35157967)
chr4 (39-89)||(35161106-35161156)
chr4 (79-148)||(54580018-54580087)
chr4 (84-160)||(4383351-4383426)
chr4 (92-168)||(11651142-11651218)
chr4 (40-88)||(12708213-12708261)
chr4 (103-150)||(4672104-4672151)
chr4 (108-175)||(20521873-20521940)
chr4 (79-142)||(29205445-29205508)
chr4 (84-170)||(35723384-35723470)
chr4 (84-143)||(51701258-51701317)
chr4 (40-74)||(18844423-18844457)
chr4 (102-180)||(28720840-28720916)
chr4 (99-145)||(32910549-32910595)
chr4 (79-148)||(42640521-42640593)
chr4 (99-160)||(903905-903966)
chr4 (102-163)||(30522933-30522994)
chr4 (99-168)||(30838185-30838254)
chr4 (84-175)||(30982878-30982966)
chr4 (99-148)||(40613445-40613494)
chr4 (40-88)||(715545-715593)
chr4 (40-88)||(752871-752919)
chr4 (39-79)||(5775303-5775343)
chr4 (40-88)||(8423658-8423706)
chr4 (99-163)||(13783261-13783325)
chr4 (99-175)||(16402226-16402302)
chr4 (39-83)||(40784029-40784073)
chr4 (39-83)||(53381529-53381573)
chr4 (92-182)||(752941-753031)
chr4 (39-74)||(3064867-3064902)
chr4 (79-158)||(16073380-16073458)
chr4 (85-144)||(24613702-24613761)
chr4 (99-178)||(26504314-26504393)
chr4 (101-132)||(31243565-31243596)
chr4 (40-83)||(36635406-36635449)
chr4 (40-74)||(3144587-3144621)
chr4 (41-83)||(4383443-4383484)
chr4 (79-129)||(13307891-13307941)
chr4 (72-129)||(13484037-13484095)
chr4 (99-157)||(15029751-15029809)
chr4 (39-89)||(18513174-18513224)
chr4 (40-74)||(23292926-23292960)
chr4 (102-168)||(34515892-34515958)
chr4 (79-145)||(35161034-35161100)
chr4 (79-177)||(40179631-40179729)
chr4 (99-148)||(1747207-1747256)
chr4 (63-123)||(6879443-6879504)
chr4 (99-163)||(16184799-16184861)
chr4 (40-89)||(16886677-16886726)
chr4 (40-89)||(24343583-24343632)
chr4 (99-132)||(26276024-26276057)
chr4 (99-132)||(36386226-36386259)
chr4 (41-89)||(3947702-3947750)
chr4 (79-143)||(4157150-4157213)
chr4 (98-201)||(12708088-12708192)
chr4 (70-126)||(13117446-13117502)
chr4 (43-83)||(28084600-28084640)
chr4 (40-88)||(29205539-29205587)
chr4 (41-89)||(30982808-30982856)
chr4 (100-144)||(38148741-38148785)
chr4 (99-175)||(40742559-40742635)
chr4 (99-143)||(56257933-56257977)
[»] scaffold0223 (1 HSPs)
scaffold0223 (39-181)||(20134-20280)
[»] scaffold0053 (1 HSPs)
scaffold0053 (79-200)||(8741-8862)
[»] chr7 (90 HSPs)
chr7 (84-182)||(27945002-27945100)
chr7 (40-148)||(28155565-28155673)
chr7 (84-187)||(24339598-24339701)
chr7 (91-175)||(13770659-13770743)
chr7 (40-167)||(30813788-30813916)
chr7 (79-175)||(25481870-25481966)
chr7 (99-175)||(43249961-43250037)
chr7 (84-199)||(5409836-5409951)
chr7 (91-170)||(24105651-24105730)
chr7 (79-182)||(26733265-26733368)
chr7 (79-197)||(11061071-11061189)
chr7 (47-163)||(18215144-18215265)
chr7 (79-160)||(23191879-23191960)
chr7 (84-175)||(43027469-43027560)
chr7 (99-178)||(18233613-18233694)
chr7 (39-148)||(35861959-35862071)
chr7 (107-172)||(11722121-11722186)
chr7 (100-200)||(30730980-30731080)
chr7 (79-200)||(18213028-18213150)
chr7 (79-137)||(21880158-21880216)
chr7 (100-158)||(32308105-32308163)
chr7 (40-89)||(598278-598327)
chr7 (101-178)||(4017811-4017888)
chr7 (41-160)||(9482917-9483040)
chr7 (99-170)||(22868015-22868086)
chr7 (40-178)||(29763129-29763268)
chr7 (99-162)||(29787384-29787447)
chr7 (79-182)||(33994173-33994276)
chr7 (99-201)||(5235928-5236030)
chr7 (99-157)||(5835233-5835291)
chr7 (84-199)||(9778452-9778559)
chr7 (100-162)||(21828421-21828483)
chr7 (79-182)||(21864767-21864872)
chr7 (99-200)||(1433397-1433498)
chr7 (99-168)||(19206025-19206094)
chr7 (40-143)||(19213803-19213912)
chr7 (79-156)||(20549778-20549855)
chr7 (105-181)||(2425754-2425830)
chr7 (39-83)||(5409770-5409814)
chr7 (79-163)||(15680789-15680873)
chr7 (40-88)||(21880223-21880271)
chr7 (99-175)||(26329397-26329473)
chr7 (40-95)||(6490780-6490835)
chr7 (79-162)||(7197292-7197375)
chr7 (99-182)||(7328706-7328789)
chr7 (84-143)||(19992001-19992060)
chr7 (101-144)||(23930218-23930261)
chr7 (40-145)||(3991322-3991432)
chr7 (79-145)||(8234144-8234210)
chr7 (103-169)||(8842354-8842420)
chr7 (39-89)||(9778575-9778625)
chr7 (40-74)||(29812598-29812632)
chr7 (84-157)||(9408334-9408407)
chr7 (84-165)||(10042915-10042996)
chr7 (99-164)||(22484004-22484069)
chr7 (41-90)||(32287404-32287453)
chr7 (40-89)||(43027404-43027453)
chr7 (101-145)||(7133295-7133339)
chr7 (40-132)||(10230024-10230121)
chr7 (99-175)||(17851399-17851475)
chr7 (99-167)||(22602725-22602793)
chr7 (91-139)||(26033468-26033516)
chr7 (78-178)||(12278794-12278899)
chr7 (93-175)||(13557750-13557835)
chr7 (99-170)||(15902795-15902866)
chr7 (40-83)||(24339729-24339772)
chr7 (108-175)||(36297369-36297435)
chr7 (99-161)||(1401007-1401069)
chr7 (99-137)||(2424620-2424658)
chr7 (84-146)||(5548673-5548735)
chr7 (83-129)||(5937420-5937466)
chr7 (99-157)||(6630927-6630985)
chr7 (84-155)||(11272586-11272659)
chr7 (99-168)||(12289088-12289158)
chr7 (45-83)||(13770772-13770810)
chr7 (99-197)||(21140997-21141095)
chr7 (99-169)||(49107795-49107864)
chr7 (40-89)||(1433529-1433578)
chr7 (79-132)||(4909162-4909215)
chr7 (99-132)||(17307904-17307937)
chr7 (84-165)||(18013074-18013155)
chr7 (41-78)||(18035806-18035843)
chr7 (79-124)||(25956464-25956509)
chr7 (86-135)||(37775990-37776039)
chr7 (79-175)||(598176-598272)
chr7 (43-83)||(8842282-8842322)
chr7 (84-132)||(12843175-12843223)
chr7 (104-148)||(24289815-24289859)
chr7 (84-148)||(25822650-25822714)
chr7 (44-88)||(40287306-40287350)
[»] chr3 (106 HSPs)
chr3 (79-181)||(55401037-55401139)
chr3 (80-181)||(8587017-8587118)
chr3 (66-165)||(10268468-10268567)
chr3 (79-175)||(24205037-24205132)
chr3 (84-175)||(28917969-28918060)
chr3 (79-200)||(7171445-7171565)
chr3 (79-175)||(8383225-8383321)
chr3 (84-199)||(15796294-15796409)
chr3 (79-198)||(16000011-16000130)
chr3 (79-200)||(35994734-35994853)
chr3 (79-170)||(26492200-26492291)
chr3 (39-175)||(10335244-10335377)
chr3 (83-200)||(21479067-21479178)
chr3 (91-175)||(4990974-4991058)
chr3 (79-163)||(10954932-10955016)
chr3 (40-168)||(11610496-11610628)
chr3 (84-175)||(14829658-14829748)
chr3 (79-178)||(25093467-25093566)
chr3 (79-157)||(20503451-20503529)
chr3 (102-175)||(3164043-3164116)
chr3 (92-156)||(4987299-4987363)
chr3 (99-179)||(25064873-25064953)
chr3 (91-174)||(3610602-3610685)
chr3 (91-170)||(26508083-26508162)
chr3 (84-175)||(41961650-41961741)
chr3 (100-170)||(14979154-14979224)
chr3 (39-157)||(40052318-40052432)
chr3 (84-200)||(750618-750735)
chr3 (100-169)||(9800014-9800083)
chr3 (102-175)||(16789668-16789741)
chr3 (84-148)||(14209108-14209172)
chr3 (84-168)||(14216867-14216951)
chr3 (84-168)||(14222996-14223080)
chr3 (99-199)||(34307795-34307895)
chr3 (79-143)||(51206348-51206412)
chr3 (103-174)||(25652050-25652121)
chr3 (39-89)||(41961578-41961628)
chr3 (50-178)||(12674466-12674595)
chr3 (84-199)||(14747511-14747621)
chr3 (84-161)||(14832081-14832158)
chr3 (40-89)||(34185052-34185101)
chr3 (79-160)||(49505149-49505230)
chr3 (102-170)||(2620071-2620139)
chr3 (99-171)||(5441046-5441118)
chr3 (99-199)||(11665888-11665988)
chr3 (79-158)||(25775493-25775573)
chr3 (99-163)||(25948902-25948966)
chr3 (84-148)||(34910312-34910376)
chr3 (39-83)||(49651715-49651759)
chr3 (84-143)||(1509539-1509598)
chr3 (103-182)||(4466619-4466698)
chr3 (41-88)||(8789489-8789536)
chr3 (103-170)||(14223872-14223939)
chr3 (40-83)||(20503541-20503584)
chr3 (100-163)||(21720744-21720807)
chr3 (79-145)||(7928448-7928514)
chr3 (101-175)||(14618749-14618823)
chr3 (39-89)||(27903708-27903758)
chr3 (79-159)||(32400703-32400780)
chr3 (81-163)||(33359741-33359823)
chr3 (91-169)||(35312028-35312106)
chr3 (99-164)||(11493376-11493441)
chr3 (52-125)||(13414487-13414560)
chr3 (43-131)||(21367289-21367382)
chr3 (40-89)||(27505321-27505370)
chr3 (99-180)||(32429395-32429476)
chr3 (84-157)||(34185123-34185196)
chr3 (39-88)||(40993274-40993323)
chr3 (80-143)||(8593136-8593200)
chr3 (39-83)||(14979225-14979269)
chr3 (91-143)||(21256993-21257045)
chr3 (86-174)||(24633736-24633823)
chr3 (84-148)||(28812510-28812574)
chr3 (99-175)||(32804555-32804630)
chr3 (120-163)||(3865592-3865635)
chr3 (42-89)||(4987222-4987269)
chr3 (40-128)||(12083918-12084002)
chr3 (99-182)||(16788973-16789056)
chr3 (101-132)||(20691330-20691361)
chr3 (101-132)||(21149078-21149109)
chr3 (101-148)||(25074784-25074831)
chr3 (101-144)||(34189426-34189469)
chr3 (40-74)||(4990912-4990946)
chr3 (99-161)||(5407262-5407324)
chr3 (79-145)||(8789545-8789611)
chr3 (40-74)||(8842414-8842448)
chr3 (125-163)||(10318075-10318113)
chr3 (99-137)||(11251984-11252022)
chr3 (40-78)||(11252057-11252095)
chr3 (99-145)||(11313815-11313861)
chr3 (41-83)||(14216979-14217021)
chr3 (41-83)||(14223108-14223150)
chr3 (99-169)||(14840306-14840376)
chr3 (99-145)||(16192765-16192811)
chr3 (84-146)||(27505243-27505305)
chr3 (41-83)||(34910393-34910435)
chr3 (40-74)||(55401160-55401194)
chr3 (45-90)||(1509636-1509681)
chr3 (99-148)||(8039850-8039899)
chr3 (99-148)||(12704002-12704051)
chr3 (40-69)||(17276817-17276846)
chr3 (42-83)||(29508526-29508567)
chr3 (99-143)||(9624641-9624685)
chr3 (99-143)||(10690277-10690321)
chr3 (41-89)||(15999951-15999999)
chr3 (99-143)||(27277853-27277897)
[»] scaffold0027 (1 HSPs)
scaffold0027 (40-200)||(46625-46776)
[»] scaffold0652 (1 HSPs)
scaffold0652 (79-197)||(457-575)
[»] chr8 (91 HSPs)
chr8 (39-172)||(27213518-27213645)
chr8 (84-175)||(22651944-22652035)
chr8 (86-175)||(29510306-29510395)
chr8 (99-199)||(24362217-24362317)
chr8 (79-170)||(20873042-20873133)
chr8 (40-170)||(24669406-24669536)
chr8 (84-199)||(2572056-2572171)
chr8 (85-187)||(4673426-4673528)
chr8 (40-175)||(13436910-13437055)
chr8 (85-175)||(22197743-22197833)
chr8 (99-180)||(25192362-25192443)
chr8 (79-163)||(36450749-36450833)
chr8 (79-170)||(8343289-8343380)
chr8 (79-182)||(31556958-31557060)
chr8 (81-175)||(926785-926879)
chr8 (80-172)||(18170478-18170570)
chr8 (80-172)||(18634046-18634138)
chr8 (40-143)||(25566841-25566949)
chr8 (99-175)||(44067484-44067560)
chr8 (81-156)||(22595981-22596056)
chr8 (84-159)||(30271291-30271366)
chr8 (99-198)||(36934615-36934714)
chr8 (79-199)||(24413554-24413675)
chr8 (40-132)||(4948663-4948754)
chr8 (84-160)||(15816129-15816205)
chr8 (79-155)||(24613509-24613584)
chr8 (40-83)||(15816058-15816101)
chr8 (79-137)||(3025557-3025615)
chr8 (99-181)||(11927101-11927183)
chr8 (79-157)||(13844591-13844669)
chr8 (85-170)||(4298887-4298972)
chr8 (79-160)||(5813575-5813656)
chr8 (37-145)||(8342970-8343089)
chr8 (79-188)||(26434135-26434244)
chr8 (99-160)||(34897068-34897129)
chr8 (79-132)||(40332202-40332255)
chr8 (99-151)||(7658455-7658507)
chr8 (99-167)||(11803235-11803303)
chr8 (82-158)||(30077385-30077461)
chr8 (99-175)||(37283825-37283901)
chr8 (92-168)||(41838131-41838207)
chr8 (99-182)||(13203602-13203685)
chr8 (41-88)||(24205749-24205796)
chr8 (80-163)||(31109514-31109597)
chr8 (79-170)||(42874495-42874586)
chr8 (99-145)||(4611532-4611578)
chr8 (101-174)||(24857978-24858054)
chr8 (39-89)||(29510232-29510282)
chr8 (41-148)||(31236532-31236641)
chr8 (40-143)||(31514872-31514973)
chr8 (40-74)||(39820513-39820547)
chr8 (99-157)||(39954294-39954352)
chr8 (91-168)||(18407695-18407771)
chr8 (40-89)||(22652057-22652106)
chr8 (101-178)||(39820394-39820471)
chr8 (75-135)||(1433353-1433413)
chr8 (39-83)||(4673353-4673397)
chr8 (37-89)||(8343397-8343449)
chr8 (80-200)||(27101458-27101577)
chr8 (82-157)||(4786336-4786411)
chr8 (102-169)||(14692434-14692500)
chr8 (40-83)||(17751732-17751775)
chr8 (40-83)||(17760719-17760762)
chr8 (79-160)||(22204622-22204705)
chr8 (119-182)||(24196632-24196695)
chr8 (105-176)||(28883899-28883970)
chr8 (85-144)||(29447111-29447170)
chr8 (99-166)||(29776013-29776080)
chr8 (91-146)||(41831947-41832002)
chr8 (99-181)||(11944627-11944709)
chr8 (39-89)||(15131733-15131783)
chr8 (39-89)||(22197670-22197720)
chr8 (40-74)||(24413499-24413533)
chr8 (40-89)||(3951476-3951525)
chr8 (99-132)||(14134710-14134743)
chr8 (43-76)||(24727684-24727717)
chr8 (99-132)||(34201061-34201094)
chr8 (40-88)||(6065586-6065634)
chr8 (92-160)||(7442828-7442896)
chr8 (40-88)||(11803341-11803389)
chr8 (101-137)||(12559123-12559159)
chr8 (99-143)||(14731712-14731756)
chr8 (42-82)||(16987990-16988030)
chr8 (119-167)||(17751651-17751699)
chr8 (119-167)||(17760638-17760686)
chr8 (85-157)||(20679396-20679468)
chr8 (84-170)||(27067300-27067387)
chr8 (102-182)||(28642369-28642449)
chr8 (102-170)||(28745471-28745539)
chr8 (41-89)||(29447040-29447088)
chr8 (79-175)||(33405379-33405475)
[»] chr2 (88 HSPs)
chr2 (39-181)||(19536360-19536495)
chr2 (39-197)||(21616708-21616865)
chr2 (39-182)||(20539631-20539772)
chr2 (79-178)||(15972838-15972937)
chr2 (99-180)||(21782833-21782914)
chr2 (42-163)||(42832234-42832355)
chr2 (79-182)||(21624227-21624331)
chr2 (79-170)||(30404845-30404936)
chr2 (85-175)||(18276489-18276579)
chr2 (81-163)||(37558957-37559039)
chr2 (79-175)||(2438714-2438808)
chr2 (90-163)||(21374705-21374778)
chr2 (79-170)||(18841008-18841099)
chr2 (99-182)||(23717988-23718070)
chr2 (99-182)||(24105660-24105742)
chr2 (101-175)||(10535776-10535850)
chr2 (80-170)||(21091696-21091786)
chr2 (84-173)||(15657834-15657923)
chr2 (90-163)||(39323244-39323317)
chr2 (79-175)||(18421931-18422027)
chr2 (84-168)||(30335392-30335476)
chr2 (99-199)||(31283992-31284092)
chr2 (91-165)||(6940233-6940307)
chr2 (40-175)||(31018558-31018689)
chr2 (79-157)||(38117154-38117232)
chr2 (79-168)||(20242722-20242811)
chr2 (91-164)||(30717537-30717610)
chr2 (99-200)||(34784997-34785098)
chr2 (79-175)||(43586000-43586096)
chr2 (85-168)||(11223864-11223947)
chr2 (41-132)||(23921264-23921355)
chr2 (99-162)||(24894370-24894433)
chr2 (84-154)||(12668423-12668493)
chr2 (98-168)||(12940949-12941019)
chr2 (101-175)||(23354669-23354743)
chr2 (84-170)||(36756344-36756430)
chr2 (39-89)||(37419824-37419874)
chr2 (99-168)||(27286307-27286376)
chr2 (99-199)||(28677852-28677953)
chr2 (85-168)||(14996224-14996308)
chr2 (41-164)||(20473301-20473427)
chr2 (99-175)||(28412318-28412394)
chr2 (101-175)||(896181-896253)
chr2 (45-168)||(23058389-23058527)
chr2 (100-158)||(27460011-27460070)
chr2 (67-129)||(8300202-8300264)
chr2 (99-157)||(15909647-15909705)
chr2 (40-89)||(26769592-26769641)
chr2 (79-170)||(28596445-28596533)
chr2 (78-127)||(33884067-33884116)
chr2 (40-89)||(38117099-38117148)
chr2 (40-88)||(11223793-11223841)
chr2 (99-163)||(16069269-16069333)
chr2 (39-83)||(29176367-29176411)
chr2 (91-163)||(34221504-34221576)
chr2 (99-163)||(37411259-37411323)
chr2 (42-89)||(19942335-19942382)
chr2 (86-157)||(31808063-31808134)
chr2 (84-159)||(37419727-37419802)
chr2 (40-83)||(37559053-37559096)
chr2 (79-146)||(5040729-5040798)
chr2 (101-175)||(11308021-11308094)
chr2 (40-74)||(18420363-18420397)
chr2 (105-175)||(23355016-23355086)
chr2 (39-89)||(32200609-32200659)
chr2 (39-89)||(34006929-34006979)
chr2 (99-198)||(44860273-44860364)
chr2 (79-132)||(5367203-5367256)
chr2 (40-89)||(10535685-10535734)
chr2 (52-89)||(14996171-14996208)
chr2 (86-175)||(18420436-18420525)
chr2 (79-132)||(18570983-18571036)
chr2 (99-148)||(19573973-19574022)
chr2 (40-89)||(35056949-35056998)
chr2 (99-168)||(36409642-36409711)
chr2 (40-89)||(42511322-42511371)
chr2 (84-144)||(974746-974806)
chr2 (42-74)||(2438661-2438693)
chr2 (99-175)||(4332894-4332970)
chr2 (41-89)||(17651633-17651681)
chr2 (79-170)||(18589171-18589260)
chr2 (152-200)||(18631467-18631515)
chr2 (101-177)||(30298464-30298540)
chr2 (84-128)||(32749825-32749869)
chr2 (84-148)||(33153419-33153483)
chr2 (99-167)||(35449489-35449557)
chr2 (101-157)||(37986765-37986821)
chr2 (100-132)||(40681993-40682025)
[»] chr1 (122 HSPs)
chr1 (84-200)||(6612171-6612287)
chr1 (39-157)||(22881566-22881689)
chr1 (39-199)||(29144319-29144472)
chr1 (40-170)||(48450550-48450673)
chr1 (99-201)||(398780-398882)
chr1 (45-198)||(3490352-3490498)
chr1 (79-200)||(41877465-41877586)
chr1 (40-157)||(35702542-35702661)
chr1 (91-178)||(31015008-31015095)
chr1 (84-198)||(1486709-1486823)
chr1 (80-182)||(5927336-5927438)
chr1 (41-174)||(9103609-9103741)
chr1 (42-142)||(25452108-25452206)
chr1 (80-204)||(42359445-42359569)
chr1 (79-163)||(46348378-46348462)
chr1 (84-171)||(5376500-5376587)
chr1 (39-148)||(13436453-13436563)
chr1 (44-187)||(48040418-48040565)
chr1 (103-175)||(2896140-2896212)
chr1 (79-199)||(38078656-38078771)
chr1 (99-182)||(10572604-10572687)
chr1 (99-182)||(19562636-19562718)
chr1 (79-161)||(22515882-22515964)
chr1 (84-198)||(31694710-31694824)
chr1 (99-172)||(1262855-1262928)
chr1 (101-178)||(20157367-20157444)
chr1 (206-263)||(39832752-39832809)
chr1 (39-123)||(46940747-46940832)
chr1 (99-199)||(10577750-10577850)
chr1 (45-161)||(12443422-12443537)
chr1 (79-170)||(19058851-19058943)
chr1 (84-175)||(40917719-40917808)
chr1 (84-200)||(47989441-47989556)
chr1 (99-170)||(6427323-6427394)
chr1 (84-175)||(7918211-7918302)
chr1 (46-175)||(13011172-13011307)
chr1 (91-170)||(14359529-14359607)
chr1 (86-169)||(21378552-21378635)
chr1 (79-158)||(31672890-31672969)
chr1 (99-174)||(34298405-34298480)
chr1 (39-132)||(2288124-2288215)
chr1 (84-175)||(5944249-5944342)
chr1 (99-157)||(36878447-36878505)
chr1 (92-153)||(113289-113350)
chr1 (79-168)||(9709795-9709884)
chr1 (39-159)||(24334663-24334781)
chr1 (99-175)||(19324530-19324606)
chr1 (79-159)||(37598816-37598895)
chr1 (99-170)||(5898281-5898352)
chr1 (88-170)||(37055860-37055942)
chr1 (79-160)||(1815240-1815321)
chr1 (102-175)||(15641048-15641121)
chr1 (79-132)||(18337340-18337393)
chr1 (98-163)||(18556470-18556535)
chr1 (84-157)||(24577186-24577259)
chr1 (38-83)||(31694637-31694682)
chr1 (99-200)||(38503263-38503364)
chr1 (84-160)||(1704992-1705068)
chr1 (99-167)||(1864895-1864962)
chr1 (101-157)||(17831548-17831604)
chr1 (79-146)||(51410021-51410089)
chr1 (108-199)||(609482-609573)
chr1 (100-175)||(15323131-15323206)
chr1 (91-199)||(18190115-18190215)
chr1 (91-199)||(18471242-18471352)
chr1 (40-83)||(18556385-18556428)
chr1 (103-174)||(21366039-21366110)
chr1 (100-167)||(23636065-23636132)
chr1 (39-89)||(9828125-9828175)
chr1 (79-145)||(40258928-40258994)
chr1 (39-89)||(40917830-40917880)
chr1 (98-175)||(16297297-16297374)
chr1 (85-170)||(28273089-28273174)
chr1 (40-89)||(32461393-32461442)
chr1 (42-83)||(42359391-42359432)
chr1 (79-148)||(43492489-43492558)
chr1 (99-163)||(6415016-6415080)
chr1 (99-167)||(16927200-16927268)
chr1 (102-174)||(17754280-17754352)
chr1 (39-83)||(21365991-21366035)
chr1 (39-83)||(22947806-22947850)
chr1 (84-132)||(25361897-25361945)
chr1 (101-145)||(26238129-26238173)
chr1 (98-170)||(27471580-27471652)
chr1 (38-74)||(37598916-37598952)
chr1 (79-143)||(40181871-40181935)
chr1 (39-95)||(42325623-42325679)
chr1 (40-88)||(47989579-47989627)
chr1 (85-132)||(3921678-3921725)
chr1 (84-155)||(6332659-6332729)
chr1 (139-182)||(9630635-9630678)
chr1 (42-89)||(16297223-16297270)
chr1 (42-89)||(17778623-17778670)
chr1 (86-129)||(18946036-18946079)
chr1 (42-89)||(23705422-23705469)
chr1 (99-146)||(25098570-25098617)
chr1 (40-83)||(27965940-27965983)
chr1 (84-163)||(34712383-34712462)
chr1 (79-182)||(39130762-39130865)
chr1 (39-90)||(48632322-48632373)
chr1 (39-89)||(6427545-6427595)
chr1 (39-89)||(15765828-15765878)
chr1 (40-74)||(22515827-22515861)
chr1 (99-145)||(23738676-23738722)
chr1 (99-145)||(40747788-40747834)
chr1 (102-132)||(42325571-42325601)
chr1 (42-83)||(1486646-1486687)
chr1 (104-157)||(10474997-10475050)
chr1 (105-182)||(16812504-16812581)
chr1 (99-172)||(22794093-22794166)
chr1 (42-75)||(23622391-23622424)
chr1 (134-199)||(41597520-41597585)
chr1 (99-132)||(44482241-44482274)
chr1 (40-88)||(5944365-5944413)
chr1 (39-83)||(7918153-7918197)
chr1 (100-148)||(9828039-9828087)
chr1 (40-80)||(16812635-16812675)
chr1 (40-196)||(23531734-23531890)
chr1 (99-163)||(32724113-32724177)
chr1 (40-88)||(32899962-32900010)
chr1 (38-74)||(34741931-34741967)
chr1 (79-163)||(52903229-52903313)
[»] scaffold0018 (2 HSPs)
scaffold0018 (85-175)||(178819-178910)
scaffold0018 (91-168)||(192256-192333)
[»] scaffold0003 (2 HSPs)
scaffold0003 (84-175)||(241562-241653)
scaffold0003 (40-89)||(241675-241724)
[»] scaffold0021 (1 HSPs)
scaffold0021 (91-199)||(130426-130534)
[»] scaffold0007 (1 HSPs)
scaffold0007 (99-175)||(225283-225359)
[»] scaffold0306 (1 HSPs)
scaffold0306 (83-182)||(13361-13460)
[»] scaffold0152 (1 HSPs)
scaffold0152 (83-182)||(21867-21966)
[»] scaffold0004 (3 HSPs)
scaffold0004 (88-160)||(92790-92862)
scaffold0004 (41-88)||(92893-92940)
scaffold0004 (41-156)||(123612-123731)
[»] scaffold0103 (1 HSPs)
scaffold0103 (92-163)||(51791-51862)
[»] scaffold0049 (2 HSPs)
scaffold0049 (63-172)||(63743-63853)
scaffold0049 (84-132)||(56933-56981)
[»] scaffold0136 (2 HSPs)
scaffold0136 (84-168)||(3849-3933)
scaffold0136 (38-74)||(3776-3812)
[»] scaffold0722 (1 HSPs)
scaffold0722 (79-160)||(7027-7108)
[»] scaffold0008 (1 HSPs)
scaffold0008 (84-188)||(263372-263476)
[»] scaffold0246 (1 HSPs)
scaffold0246 (92-170)||(19549-19626)
[»] scaffold0019 (2 HSPs)
scaffold0019 (84-157)||(71709-71784)
scaffold0019 (39-89)||(71806-71856)
[»] scaffold0020 (1 HSPs)
scaffold0020 (40-182)||(135263-135410)
[»] scaffold0171 (2 HSPs)
scaffold0171 (84-170)||(23393-23479)
scaffold0171 (84-170)||(23483-23570)
[»] scaffold0066 (1 HSPs)
scaffold0066 (98-148)||(33377-33427)
[»] scaffold0116 (1 HSPs)
scaffold0116 (99-200)||(9841-9942)
[»] scaffold0050 (1 HSPs)
scaffold0050 (79-144)||(70277-70342)
[»] scaffold0361 (1 HSPs)
scaffold0361 (93-148)||(14525-14580)
[»] scaffold0122 (2 HSPs)
scaffold0122 (84-175)||(8634-8725)
scaffold0122 (79-148)||(8005-8073)
[»] scaffold0086 (1 HSPs)
scaffold0086 (40-83)||(3015-3058)
[»] scaffold0044 (1 HSPs)
scaffold0044 (99-174)||(53153-53224)
[»] scaffold0598 (1 HSPs)
scaffold0598 (102-163)||(8071-8132)
[»] scaffold0475 (1 HSPs)
scaffold0475 (39-84)||(3383-3428)
[»] scaffold1528 (1 HSPs)
scaffold1528 (102-174)||(1004-1076)
[»] scaffold0793 (2 HSPs)
scaffold0793 (40-88)||(4821-4869)
scaffold0793 (92-182)||(4891-4981)
[»] scaffold0168 (3 HSPs)
scaffold0168 (99-175)||(21011-21087)
scaffold0168 (39-74)||(21115-21150)
scaffold0168 (39-74)||(21373-21408)
[»] scaffold0011 (1 HSPs)
scaffold0011 (85-148)||(17750-17813)
[»] scaffold0083 (1 HSPs)
scaffold0083 (79-117)||(45525-45563)
[»] scaffold0022 (1 HSPs)
scaffold0022 (99-169)||(90817-90887)
[»] scaffold0450 (1 HSPs)
scaffold0450 (40-89)||(8564-8613)
[»] scaffold0123 (1 HSPs)
scaffold0123 (99-131)||(44540-44572)
[»] scaffold0025 (1 HSPs)
scaffold0025 (84-159)||(23753-23829)


Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 91)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 13 - 332
Target Start/End: Original strand, 6326226 - 6326552
Alignment:
Q  13 agaacctgtgggaggtgtttgatacccctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaat 112  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||    
T  6326226 agaacctgcaggaggtgtttgatacccctatgaagcacggacacttctcgaattaggcgtgttccggtgtccgacgctgacacttgtaattacactgaat 6326325  T
Q  113 tatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcataggatacc------- 205  Q
    ||||| |||||||||||||||||||  ||||||||| ||||||||||||||||||||||| || || |||||||| |||||||||||||||||           
T  6326326 tatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtccttatccatgcttcataggatacccccaatg 6326425  T
Q  206 gtatgtgctcctaaactaaatgtcttctaagtgtgtaagatctgccagaggataccctccgcaatccattactttagaaaccgaattggacggttcaacc 305  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6326426 gtatatgctcctaaactaaatgtcttctaagtgtgtgagatctgccagaggataccctccgcaatccattactttagaagccgaattggacggttcaacc 6326525  T
Q  306 acagaccttaactaaattttggcagtt 332  Q
    |||||||||||||||||||||||||||    
T  6326526 acagaccttaactaaattttggcagtt 6326552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 39 - 175
Target Start/End: Complemental strand, 6247730 - 6247590
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccg----gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    |||||||||||| |||||||||||||||||| |||| |||    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| |    
T  6247730 cctatgaagcacagacacttctcggattaggtgtgtcccgtgccgtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 6247631  T
Q  135 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    || ||||||||||| ||||||| ||| ||||||||||||||    
T  6247630 agatgtgtcggcgtgtcagtgtgcgtatcgtgtccggtgtc 6247590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 21191051 - 21191147
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||    
T  21191051 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccggtgtc 21191147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 21522809 - 21522691
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||| | |||||||||||||||||||| ||||| | |||||| ||||||||||||||| |||||||||||||||||||||||| | || |||     
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21522710  T
Q  184 tatctatgcttcataggat 202  Q
    ||||  |||||||||||||    
T  21522709 tatccgtgcttcataggat 21522691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 21533375 - 21533257
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||| | |||||||||||||||||||| ||||| | |||||| ||||||||||||||| |||||||||||||||||||||||| | || |||     
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgaccgtgtccg 21533276  T
Q  184 tatctatgcttcataggat 202  Q
    ||||  |||||||||||||    
T  21533275 tatccgtgcttcataggat 21533257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 19579760 - 19579669
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||| |||||| |||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||| || |||||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgttgtatccggtgtc 19579669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 40 - 173
Target Start/End: Original strand, 24906252 - 24906390
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    |||||||||||||||||| |||| ||||||||||| |   ||||     ||| || |||||| |||||||||||||||||||||||||| |||||||| |    
T  24906252 ctatgaagcacggacactcctcgaattaggcgtgtcctattgtcatgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattatt 24906351  T
Q  135 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtg 173  Q
    | |||||| ||||| ||||||| ||||||||||||||||    
T  24906352 atctgtgttggcgtgtcagtgttcgtgtcgtgtccggtg 24906390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 22013458 - 22013375
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||||||| |||||||| |||||  ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 22013375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 49 - 200
Target Start/End: Original strand, 17176991 - 17177139
Alignment:
Q  49 acggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||| ||  |||||||||||||   |||||  |||| |||||| ||||||||| |||||| | | ||||| |||||||| ||||||||| |||||    
T  17176991 acggacactacttagattaggcgtgtt---gtgtctaacaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgt 17177087  T
Q  149 atcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatagg 200  Q
    ||||||||||| ||||| || ||||||||| ||| ||||  |||||||||||    
T  17177088 atcagtgtccgagtcgtatctggtgtctgtgtccgtatccgtgcttcatagg 17177139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 15382539 - 15382420
Alignment:
Q  83 ccgacactgacactcgtaattacactgaattatgtcattttct--caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 180  Q
    ||||||| |||||| ||||||| |||||||||| | ||||| |  ||||||| ||||||||||||||| ||| |||||||||||||||||||||| || |    
T  15382539 ccgacaccgacacttgtaattatactgaattatatgattttttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgt 15382440  T
Q  181 ccttatctatgcttcatagg 200  Q
    || ||||  |||||||||||    
T  15382439 ccgtatccgtgcttcatagg 15382420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 21576740 - 21576824
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||  |||||| |||||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||||| ||||||    
T  21576740 gtgtccgacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgttggcgtatcagtgttcgtgtc 21576824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 39698600 - 39698524
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||| |||||||||| |||| |||||||||||    
T  39698600 cgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgt 39698524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 13287399 - 13287490
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||| ||| |||||||||||||||| ||||| |||||||| || |||||||| ||| | ||||||||||||||||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccggtgtc 13287490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 85 - 200
Target Start/End: Original strand, 36642763 - 36642877
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcctt 184  Q
    ||||| ||||||  || ||||||| || ||||||| ||| |||||||| || |||||||||||| ||||||||||||||||||||||||||| | ||| |    
T  36642763 gacaccgacacttatatttacactaaaatatgtcactttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtct-tgtccgt 36642861  T
Q  185 atctatgcttcatagg 200  Q
    ||| ||||||||||||    
T  36642862 atccatgcttcatagg 36642877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 6770605 - 6770486
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||||||||||||||   ||| ||||||||||||||| ||||||| |||||| ||| |||||| | || |||||||||||||| ||| ||||||| ||    
T  6770605 gtgtccgacactgacaca--taagtacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccgtgtcatgttcggtgtccgt 6770508  T
Q  179 atccttatctatgcttcatagg 200  Q
    |||| ||||  |||||||||||    
T  6770507 atccgtatccgtgcttcatagg 6770486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 78 - 182
Target Start/End: Original strand, 19820390 - 19820492
Alignment:
Q  78 ggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 177  Q
    |||||||||||| ||||||  |||||  ||| |||||||  |||||||||||||| |||| ||||||| || |||||||||||||||||||||||||| |    
T  19820390 ggtgtccgacaccgacacttataattgtacttaattatg--attttctcaaattattagcggtgtcggagtgtcagtgtccgtgtcgtgtccggtgtccg 19820487  T
Q  178 tatcc 182  Q
    |||||    
T  19820488 tatcc 19820492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 163
Target Start/End: Complemental strand, 14674321 - 14674249
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  14674321 gacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 37328844 - 37328935
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||  |||||||||||||||| ||| |||||  ||||||| | |||||||||| ||||||||||||||||||||| |||||||    
T  37328844 cgacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccgtgtcgtgttcggtgtc 37328935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 34 - 159
Target Start/End: Complemental strand, 10298675 - 10298553
Alignment:
Q  34 atacccctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattac 133  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||   | |||||| |||||| ||||||||| || ||||||| | ||| ||||||||     
T  10298675 atactcctatgaagcacggacactcctcggattaggcgtg-tccg--atacgacaccgacacttgtaattacattgtattatgtgactttttcaaattat 10298579  T
Q  134 tagctgtgtcggcgtatcagtgtccg 159  Q
    ||| ||||||||||| | ||||||||    
T  10298578 tagttgtgtcggcgtgttagtgtccg 10298553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 16203746 - 16203889
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgt-------ccgacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    ||||||||| |||||| ||||||||| |||||| |||||||       ||||||| |||||   |||||||||| |||||||  |||||||||||||| |    
T  16203746 atgaagcacagacactcctcggattaagcgtgtaccggtgtgtcttgtccgacaccgacacatataattacactaaattatgagattttctcaaattatt 16203845  T
Q  135 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||| |||||||| | | |||||||||||| ||| ||||||||||    
T  16203846 agcagtgtcggcatgttagtgtccgtgtcatgttcggtgtctgt 16203889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Original strand, 6316994 - 6317052
Alignment:
Q  206 gtatgtgctcctaaactaaatgtcttctaagtgtgtaagatctgccagaggataccctc 264  Q
    ||||||||| |||||||||||||||||||||||||||  ||||| ||||||||||||||    
T  6316994 gtatgtgcttctaaactaaatgtcttctaagtgtgtaccatctgtcagaggataccctc 6317052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 15884096 - 15883982
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttcc-----ggtgtccgacactgacactcgtaattacactgaattatgtca-ttttctcaaattac 133  Q
    ||||||| ||| |||||| |||||||||||||||||||      ||||||||||| |||||| |||||||||||||||||||| | |||| | ||||||     
T  15884096 ctatgaaacacagacactcctcggattaggcgtgttccagtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgattttttttaaattat 15883997  T
Q  134 tagctgtgtcggcgt 148  Q
    | |||||||||||||    
T  15883996 ttgctgtgtcggcgt 15883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 19552562 - 19552632
Alignment:
Q  103 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtg 173  Q
    |||||| |||||||| ||||| |||||||| || |||||||||||| |||||||||||||||||| |||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgttcggtg 19552632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 157
Target Start/End: Complemental strand, 31084375 - 31084309
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||| ||||||||| |||||||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  31084375 gacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 272 - 327
Target Start/End: Original strand, 6317164 - 6317219
Alignment:
Q  272 cattactttagaaaccgaattggacggttcaaccacagaccttaactaaattttgg 327  Q
    ||||||||||||||||||||||||||||| |||||  ||||||||||||| |||||    
T  6317164 cattactttagaaaccgaattggacggttaaaccaacgaccttaactaaagtttgg 6317219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 15410465 - 15410532
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||||||||| || | ||||||| |||||| |||| |||||||||| |||||||||||||||||||    
T  15410465 attacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 15410532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 21542089 - 21541998
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||| |||||||||||||||||||| || || | |||||| ||| ||||||||| | ||| |||| |||||||||| ||||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtcaatgtctgtgtcgtgtctggtgtc 21541998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 33178089 - 33178014
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagt 154  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| | |||||| ||| ||||||||||| |||||    
T  33178089 gtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 42893424 - 42893345
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 158  Q
    ||||| ||||| |||||| |||||||||||| ||||||| ||||| |||||||| |||||||||||| || || ||||||    
T  42893424 gtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtcc 42893345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 43001851 - 43001780
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||| |||||||||||||||||||| ||||| |||||||| |||| |||||| | | ||||||||||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 21137727 - 21137657
Alignment:
Q  105 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||| |||||||||||| |||| || |  ||||||||| ||||||||||||| ||||||||||||    
T  21137727 cactgaattacgtcattttctcagattattaccgatgtcggcgtgtcagtgtccgtgttgtgtccggtgtc 21137657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 26312833 - 26312731
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| || ||   ||||||||||||||||  | |||||||||||||| | || || ||||| ||||||||||| |||||||||| ||||| ||    
T  26312833 gtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatttgcggtatcggcatatcagtgtccatgtcgtgtccagtgtccgt 26312734  T
Q  179 atc 181  Q
    |||    
T  26312733 atc 26312731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 27932280 - 27932230
Alignment:
Q  98 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||||||||||||||||| |||||||||||||| |||| ||||||||||    
T  27932280 gtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgt 27932230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 41633794 - 41633708
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| |||| | |||||||||||||||||||| | ||| |||||||| |||||||||||| || ||||| || |||| |||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgtggtgtccg 41633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 197
Target Start/End: Complemental strand, 41995515 - 41995417
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcat 197  Q
    |||||||| |||||||||| ||||| || ||||| ||| ||||||||||| |||||||| ||||||| ||| ||||| || ||| ||||  ||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtctgtgtcgtatccagtgtccgtgtccgtatccgtgcttcat 41995417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 42469263 - 42469189
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||| || |||||||||||||||||||| || | |||||||||| ||| | |||||||||||| |||||||    
T  42469263 attacactaaaatatgtcattttctcaaattattatccgtgtcggcgtgtcattatccgtgtcgtgttcggtgtc 42469189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 43565001 - 43564951
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| |||||    
T  43565001 cctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacac 43564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 28588669 - 28588738
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||||||| || | ||||||||||    
T  28588669 gtgtccgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgt 28588738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 146
Target Start/End: Original strand, 38464312 - 38464426
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccga-------cactgacactcgtaattacactgaattatgtcattttctcaaatt 131  Q
    |||||||||||| |||||| ||||||||||| |||| |||||||| ||       ||||||||||  ||||| || ||||| |||| |||||||||||||    
T  38464312 cctatgaagcacagacactcctcggattaggtgtgtcccggtgtcggacatgtgccactgacacttataatttcaatgaataatgtgattttctcaaatt 38464411  T
Q  132 actagctgtgtcggc 146  Q
    | ||| |||||||||    
T  38464412 attagttgtgtcggc 38464426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 3966547 - 3966488
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 158  Q
    ||||||||||||||| ||| |||||||||||||| |||| |||||||| | |||||||||    
T  3966547 taattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtcc 3966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 172
Target Start/End: Complemental strand, 4105310 - 4105228
Alignment:
Q  92 acactcgtaattacactgaattatgtca--ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 172  Q
    ||||| |||||||||||||||||||| |  |||| |||||||| ||| | ||||||||| ||||| |||||||| ||||||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccgtgtcatgtccggt 4105228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 14873642 - 14873599
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgt 82  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  14873642 cctatgaagcacggacactcctcggattaggcgtgtcccggtgt 14873599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 41558707 - 41558774
Alignment:
Q  108 tgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||||||||| ||  ||||||   || |||||||||||||||| |||||||||    
T  41558707 tgaattatgtcattttctcaaattattatttgtgtcaatgtgtcagtgtccgtgtcgtatccggtgtc 41558774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 199
Target Start/End: Original strand, 26205777 - 26205875
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    ||||||||||||||||||||||||||||| |  || | || ||| ||| ||||||||| |||| ||||||||||| || ||  | || |||||||||||    
T  26205777 attacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccggtgtccgtgtctgtgtccatgcttcatag 26205875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 7677764 - 7677703
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    |||||| ||||||  ||||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcgg 7677703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 7997162 - 7997238
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 156  Q
    ||||||||||| ||||||  ||||||||||| ||||| |||||||||||||||| || | |||| ||||| |||||||    
T  7997162 gtgtccgacac-gacacttataattacactgtattatatcattttctcaaattattatccgtgttggcgtgtcagtgt 7997238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 136
Target Start/End: Original strand, 21194200 - 21194257
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactag 136  Q
    |||||||||||| ||||   | ||||||||||||||||| ||||||||||||||||||    
T  21194200 gtgtccgacactaacaccaatgattacactgaattatgtgattttctcaaattactag 21194257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 158
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 158  Q
    ||||| |||||| |||||||||||||||||||| | ||| || ||||| ||| |||||||| || |||||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 6471904 - 6471948
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||    
T  6471904 taattacactgaattatgtgattttctcaaattattagccgtgtc 6471948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 14422946 - 14422877
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||||||||||| |||||   |||||| ||||||| |||| || ||||||||| |||||||||||    
T  14422946 taattacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtccttgtcgtgtccg 14422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 111 - 199
Target Start/End: Complemental strand, 17123080 - 17122993
Alignment:
Q  111 attatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    ||||||| |||||||||||||| |||| |||| ||||| ||||||||| |||  |||||| |||| || ||| ||||| ||||||||||    
T  17123080 attatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgtgtcc-tatctgtgcttcatag 17122993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 19820328 - 19820376
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| ||| |||||||||||| |||||||| ||||    
T  19820328 ctatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 24273045 - 24273089
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||||||||||| |||||||||||||| || |||||||    
T  24273045 taattacactgaattatgtgattttctcaaattaataactgtgtc 24273089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 24389169 - 24389125
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||||||||||| |||||||||||||| || |||||||    
T  24389169 taattacactgaattatgtgattttctcaaattaataactgtgtc 24389125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 30502383 - 30502479
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||   |||||||||||||||| || |||||||||||||| |||| ||||  | || |||| ||  ||| |||||||||||||    
T  30502383 gtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtttgggtttcagcgtatgtgacgtgtccggtgtc 30502479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 30542726 - 30542822
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||   |||||||||||||||| || |||||||||||||| |||| ||||  | || |||| ||  ||| |||||||||||||    
T  30542726 gtgtccgacaccgacacatataattacactgaattaagtgattttctcaaattattagcggtgtttgggtttcagcgtatgtgacgtgtccggtgtc 30542822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 88 - 175
Target Start/End: Original strand, 22299485 - 22299571
Alignment:
Q  88 actgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| || ||||||| ||||||| |||| ||||| | |||||| |||||||||||| || ||| | |||||||||| |||||||||    
T  22299485 actgacccttgtaattatactgaatcatgtgatttttt-aaattattagctgtgtcggtgtgtcaatatccgtgtcgtatccggtgtc 22299571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 31264480 - 31264449
Alignment:
Q  101 attacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  31264480 attacactgaattatgtcattttctcaaatta 31264449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 163
Target Start/End: Complemental strand, 34879452 - 34879330
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    ||||| ||||||||||||||||  |||||  |||| ||| |||||||||  |||||   | ||||||||||||||| | |||||||||||||  |||| |    
T  34879452 ctatggagcacggacacttctcttattagcggtgtcccg-tgtccgacatcgacacatattattacactgaattatatgattttctcaaatttttagcgg 34879354  T
Q  140 tgtcggcgtatcagtgtccgtgtc 163  Q
    || |||||| || || ||||||||    
T  34879353 tgccggcgtgtccgtatccgtgtc 34879330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 39698671 - 39698628
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  39698671 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtc 39698628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 41558654 - 41558701
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaatt 131  Q
    ||||||||||||   |||||||| ||||||||||||||||||||||||    
T  41558654 cgacactgacacatttaattacattgaattatgtcattttctcaaatt 41558701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 2548452 - 2548398
Alignment:
Q  78 ggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||| ||||||  | ||||||||||||||||| |||||||| |||||    
T  2548452 ggtgtccgacaccgacacttatgattacactgaattatgtaattttctctaatta 2548398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 6035526 - 6035469
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||||||||||||||| | |||| ||||||||| |||| |||||||||| ||||||||    
T  6035526 taattacactgaattatattattt-ctcaaattattagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 69
Target Start/End: Original strand, 7218217 - 7218247
Alignment:
Q  39 cctatgaagcacggacacttctcggattagg 69  Q
    |||||||||||||||||||||||||||||||    
T  7218217 cctatgaagcacggacacttctcggattagg 7218247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 9449510 - 9449448
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcg 164  Q
    ||||| |||||||||| |||||||||||||| ||   ||||||||||  ||||||||||||||    
T  9449510 ttacattgaattatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtcg 9449448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 17123166 - 17123132
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  17123166 ctatgaagcacggacactcctcggattaggcgtgt 17123132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 163
Target Start/End: Original strand, 19168838 - 19168900
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||||||||| |||| ||||| |||||||| |||| |||| || || ||||||||||||||    
T  19168838 attacactgaataatgtgattttatcaaattaatagcggtgtaggtgtgtcagtgtccgtgtc 19168900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Original strand, 21194138 - 21194176
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagc 137  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  21194138 taattacactgaatgatgtgattttctcaaattactagc 21194176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 21576685 - 21576719
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgt 21576719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 22423764 - 22423798
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  22423764 ctatgaagcacggacactcctcggattaggcgtgt 22423798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 30135372 - 30135286
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| |||||| ||||||||| ||| |||||| ||||| | ||||||| ||| ||||||||||| || || || ||||||||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtcggtatctgtgtcgtgtccg 30135286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 35017162 - 35017128
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  35017162 ctatgaagcacggacactcctcggattaggcgtgt 35017128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 39268541 - 39268587
Alignment:
Q  43 tgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||| |||||||||||||||| || ||||| |||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 39268587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 135
Target Start/End: Original strand, 43208291 - 43208325
Alignment:
Q  101 attacactgaattatgtcattttctcaaattacta 135  Q
    |||||| ||||||||||||||||||||||||||||    
T  43208291 attacattgaattatgtcattttctcaaattacta 43208325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 17088402 - 17088361
Alignment:
Q  48 cacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||| |||||||||||||||| |||||||| |||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacac 17088361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 25863248 - 25863215
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||| ||||||||||||||||    
T  25863248 taattacactgaattatatcattttctcaaatta 25863215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 26716178 - 26716117
Alignment:
Q  109 gaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||| |||||||||||||| |||| |||||||| | ||| ||||  |||||||||||    
T  26716178 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccg 26716117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 26985918 - 26985857
Alignment:
Q  109 gaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||| |||||||||||||| |||| |||||||| | ||| ||||  |||||||||||    
T  26985918 gaattatgtgattttctcaaattattagcagtgtcggcatgtcaatgtctatgtcgtgtccg 26985857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 43564945 - 43564863
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| ||||||  |||||||||| |||||||| |||||  |||||||   | ||||||||||| ||||||| ||||||    
T  43564945 gtgtccgacaccgacacttataattacactaaattatgtgatttttccaaatta--tgatgtgtcggcgtgtcagtgttcgtgtc 43564863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 2577197 - 2577241
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    |||||||| ||||||||||||||||||||||| || | |||||||    
T  2577197 attacactaaattatgtcattttctcaaattattatcggtgtcgg 2577241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 6401542 - 6401466
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| ||| ||| ||||||| |||    ||| ||||||||||| || |||||||||||| ||||||||||    
T  6401542 taattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtcgcgtccggtgtc 6401466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 7677835 - 7677787
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    ||||||||||| ||| || |||||||||||||||| |||||||| ||||    
T  7677835 ctatgaagcaccgactctcctcggattaggcgtgtcccggtgtcggaca 7677787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 15086598 - 15086554
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||  |||||| |||||||||||||||||||| ||||    
T  15086598 cctatgaagcaaagacactcctcggattaggcgtgttccgatgtc 15086554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 19438386 - 19438354
Alignment:
Q  100 aattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||||||||| ||||||||||||||    
T  19438386 aattacactgaattatgtgattttctcaaatta 19438354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 21190998 - 21191030
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||| ||||||||||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgt 21191030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 21194063 - 21194111
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||| ||||||||||||| |||||||||||||||  |||||||| ||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgaca 21194111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 22423827 - 22423895
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    |||||| | |||||||||| |||||||||||||| |||  ||||| | || ||||| ||||||||||||    
T  22423827 taattatattgaattatgtgattttctcaaattattagtagtgtcagggtgtcagtatccgtgtcgtgt 22423895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 30098370 - 30098310
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 159  Q
    |||||||| |||||||||| |||||||||||||| || | || ||| ||| ||||||||||    
T  30098370 taattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccg 30098310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 39758380 - 39758340
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccgg 79  Q
    ||||||||||| ||||||| ||||||| |||||||||||||    
T  39758380 cctatgaagcatggacactcctcggataaggcgtgttccgg 39758340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 41091272 - 41091316
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||||||||||| |||||||||||| | |||| |||||    
T  41091272 taattacactgaattatgtgattttctcaaatcattagcagtgtc 41091316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Complemental strand, 43001922 - 43001890
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||| ||||||||||||||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgt 43001890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 109)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 7938219 - 7938059
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||||||||||||||| ||||||| ||||||||  ||||||| ||||| ||||||  |||||||||| |||||| | ||||| |||||||| ||||||    
T  7938219 ctatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctg 7938120  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatagg 200  Q
    ||||||||| ||||||||| |||||||||||||||| || ||| ||||  |||||||||||    
T  7938119 tgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcatagg 7938059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 16766756 - 16766642
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||| |||||||||||||||| || |||     
T  16766756 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccggtgtccgtgtccg 16766657  T
Q  184 tatctatgcttcata 198  Q
    |||| ||||||||||    
T  16766656 tatccatgcttcata 16766642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 12696383 - 12696297
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  12696383 cgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 12696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 34595198 - 34595102
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||| ||||||||||| ||| ||||||||||||||||||||||    
T  34595198 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtc 34595102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 426477 - 426629
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    ||||||||||||||||||| ||| ||||||||||||        ||||||| |||||| ||||||||| | |||||||| ||||| |||||||| || ||    
T  426477 cctatgaagcacggacactcctcagattaggcgtgt--------ccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaact 426568  T
Q  139 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    |||||||||| ||||||||||||||||||||||| || || ||  |||| |||||||||||    
T  426569 gtgtcggcgtgtcagtgtccgtgtcgtgtccggtatccgtgtctgtatccatgcttcatag 426629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 7977825 - 7977921
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||| ||| |||||||||| |||||    
T  7977825 gtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtatccatgtcgtgtccagtgtc 7977921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 8776968 - 8777088
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||||||||  ||||| |||||||||||||||| ||| ||||| |||||||| ||| ||||||||||| ||||||||||||||||||||| |||| ||    
T  8776968 gtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgt 8777067  T
Q  179 atccttatctatgcttcatag 199  Q
     ||| ||||  ||||||||||    
T  8777068 gtccgtatccgtgcttcatag 8777088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 9107370 - 9107486
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||||| |||||||||||||||| ||| ||||| |||||||| ||||||||||||||| | |||||||||||||||||||||||| || ||      
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccggtgtccgtgtcag 9107469  T
Q  184 tatctatgcttcatagg 200  Q
    ||||  |||||||||||    
T  9107470 tatccgtgcttcatagg 9107486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 40 - 199
Target Start/End: Complemental strand, 9027286 - 9027122
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    |||||||||||  ||||| || ||||||| ||||| ||||||||     |||||| |||||   ||||||||| ||||||||| ||| |||||||||| |    
T  9027286 ctatgaagcacaaacactccttggattagccgtgtcccggtgtcggacacgacaccgacacatataattacacggaattatgtgattatctcaaattatt 9027187  T
Q  135 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    ||| |||||||||| |||||||||||||||||||||| ||| || ||| ||||  ||||||||||    
T  9027186 agcggtgtcggcgtgtcagtgtccgtgtcgtgtccggagtccgtgtccgtatcggtgcttcatag 9027122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 8365519 - 8365617
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||| |||||| |||||||||| ||||||||| || || |||||||| ||| ||||||||||| ||||||||||||||||||| |||||| ||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtctggtgtccgtatcc 8365617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 31959268 - 31959132
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacact-------gacactcgtaattacactgaattatgtcattttctcaaattac 133  Q
    ||||||||||||||||| ||||||||||| |||| |||||||| |||||        |||||| |||||||||||| ||||||| ||||| ||||||||     
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcgccgacacttgtaattacactgcattatgtgattttttcaaattat 31959169  T
Q  134 tagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||||| |||||| ||||||| |||||| ||||||    
T  31959168 tagctgtgacggcgtgtcagtgttcgtgtcatgtccg 31959132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 43 - 143
Target Start/End: Original strand, 9025448 - 9025553
Alignment:
Q  43 tgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 137  Q
    |||||||||||||||||||||||||||||||| ||||||||     |||||| |||||   ||||||||||||||||||| |||||||||||||| ||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgacaccgacacatataattacactgaattatgtgattttctcaaattattagc 9025547  T
Q  138 tgtgtc 143  Q
     |||||    
T  9025548 agtgtc 9025553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 182
Target Start/End: Original strand, 853857 - 853957
Alignment:
Q  82 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    |||||||| |||||| |||||| |||| |||||||| ||||| |||||||| ||| ||||||||||| ||||  |||||||||||||||||||| |||||    
T  853857 tccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgtcagcatccgtgtcgtgtccggtgtccgtatc 853956  T
Q  182 c 182  Q
    |    
T  853957 c 853957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 17841584 - 17841668
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| | |||| ||||||||||| |||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  17841584 gtgtccgacaccgtcacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 28152162 - 28152079
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||||| ||||||||||||||    
T  28152162 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 6389851 - 6389708
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccga-cactgacact---cgta--attacactgaattatgtcattttctcaaattac 133  Q
    |||||||||||||||||||||||||||||| |||| ||| |||| || ||| |||||    | ||  |||||||| |||||| ||||||||||||||||     
T  6389851 ctatgaagcacggacacttctcggattaggagtgtcccg-tgtcggaacaccgacacgacacctatgattacactaaattatatcattttctcaaattat 6389753  T
Q  134 tagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    || | |||||||||| | |||||||||||||||||||||||||||    
T  6389752 tatccgtgtcggcgtgtgagtgtccgtgtcgtgtccggtgtctgt 6389708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 9658923 - 9658841
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||||||||| ||||||| |||||| |||| |||||||||| |||||||||||||||||| | ||||||||||||    
T  9658923 taattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgt-ctgtgtctgtatcc 9658841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 10770674 - 10770760
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||| ||||| ||||| ||||||||| |||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtccatgtcgtgtccg 10770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 59 - 148
Target Start/End: Original strand, 21924910 - 21924999
Alignment:
Q  59 ctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||||||||||||| |||||||||||||| |||||   ||||||||||||||||| | || ||||||||||| |||| ||||||||||    
T  21924910 ctcggattaggcgtgtcccggtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattagcagtgtcggcgt 21924999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 16833365 - 16833281
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||| |||||| |||||||||||||| ||||| ||||| |||||||| ||| ||||||||||| |||||||| ||||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 86 - 170
Target Start/End: Complemental strand, 17435256 - 17435172
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| ||||| |||||||||||||||||||| ||||| | |||||| ||||| ||||| |||||||||||||||||||| ||||    
T  17435256 acactaacacttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtcgtatccg 17435172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 3398662 - 3398580
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||||||| | ||||| |||||||| ||||||||||||||| |||||||||||||||||| || |||| ||||||    
T  3398662 taattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgtccgtatcc 3398580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 5732474 - 5732601
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||||||| ||||||| ||||||||||||||||        ||||||| |||||   |||||||||| || ||||| |||||||||||||| || | |    
T  5732474 ctatgaagcatggacactcctcggattaggcgtgt--------ccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacgg 5732565  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||| ||||||||| |||||||||| |||||    
T  5732566 tgtcggcgtgtcagtgtccatgtcgtgtccagtgtc 5732601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 200
Target Start/End: Complemental strand, 1681810 - 1681701
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctat 190  Q
    |||||| ||||||||||||||||| || ||||| |||||||| ||| ||||||||||| | |||||  ||||||||| |||||||||| ||  ||||  |    
T  1681810 gacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgtatgtgtcgtgttcggtgtctgtgtctgtatccgt 1681711  T
Q  191 gcttcatagg 200  Q
    ||||||||||    
T  1681710 gcttcatagg 1681701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 34290092 - 34290193
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||||||||||| ||| || ||||||| ||| ||||||||| | |||||||  ||||| | |||||||||||| ||| ||||| |||||||||    
T  34290092 taattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtgtttgtgtcttatccggtgtctgtgtccgtatctgtgcttcata 34290191  T
Q  199 gg 200  Q
    ||    
T  34290192 gg 34290193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 7265588 - 7265668
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 159  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||||||| |||| |||| ||||| ||||||||||    
T  7265588 gtgtccgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 7265668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 13851780 - 13851712
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    |||||||||||||||| || |||||||||||||| |||| |||||| ||| ||||||||||||||||||    
T  13851780 taattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgt 13851712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 28715359 - 28715295
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||| |||||| |||||||||||||||||||||||||| |||||||| |||| |||||    
T  28715359 gtgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtc 28715295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 6665257 - 6665177
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    ||||||| ||||||||||| |||| ||||||||| |||| || |||||||||  ||||||||||||||| |||||||||||||    
T  6665257 taattactctgaattatgtgatttactcaaattattagcggtttcggcgtat--gtgtccgtgtcgtgttcggtgtctgtatc 6665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 178
Target Start/End: Complemental strand, 9629427 - 9629348
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||||| |||||||||| |||||||||||||| | || |||||||||| ||| | |||||||||||||| ||||||||    
T  9629427 taattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtcaatatccgtgtcgtgtccagtgtctgt 9629348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 154
Target Start/End: Complemental strand, 19040416 - 19040341
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagt 154  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||    
T  19040416 gtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 7996393 - 7996475
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    ||||||||||||||||| | |||||||||||||| |||| |||||||| | ||||||||| |||| ||| | |||||||||||    
T  7996393 taattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatc 7996475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 8022408 - 8022326
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    ||||||||||||||||| | |||||||||||||| |||| |||||||| | ||||||||| |||| ||| | |||||||||||    
T  8022408 taattacactgaattatatgattttctcaaattattagcagtgtcggcatgtcagtgtccttgtcatgtactgtgtctgtatc 8022326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 178
Target Start/End: Original strand, 21395308 - 21395401
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||| |||||| ||||||||||| |||||||| |||||||||||||| |||| |||| ||||| || |||||| |||| | ||||||||||||    
T  21395308 cgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggtgttggcgtgtcggtgtccatgtcatatccggtgtctgt 21395401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 83 - 175
Target Start/End: Complemental strand, 3209442 - 3209350
Alignment:
Q  83 ccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||| |||||| ||||| ||||| |||||||| ||||| | ||||||| ||||||||||||||| || |||| ||||||||||||||||||    
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtctgtgt-cgtgtcgtgtccggtgtc 3209350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 8805523 - 8805687
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccg-gtgtccgacactg-ac--actcgtaattacactgaattatgtcattttctcaaattact 134  Q
    ||||||||||||||||||| |||||||||||| ||| ||  ||||| ||||||  ||  || | |||||||||| |||||||| |||||||||||||| |    
T  8805523 cctatgaagcacggacactcctcggattaggcatgtcccacgtgtctgacactacaccgacacataattacactaaattatgtgattttctcaaattatt 8805622  T
Q  135 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    ||| ||| || ||| || ||||| |||||||||| ||||| ||| |   |||| |||||||||||    
T  8805623 agcagtgccgacgtgtcggtgtctgtgtcgtgtctggtgtttgtgtatgtatccatgcttcatag 8805687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 166
Target Start/End: Original strand, 17341669 - 17341746
Alignment:
Q  89 ctgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtg 166  Q
    ||||||||  ||||||||||||||||||| ||||| |||||||| || | |||||||||| |||||| ||||||||||    
T  17341669 ctgacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtcgtg 17341746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 13360387 - 13360463
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||| ||| || |||| ||| |||||||| |||||    
T  13360387 taattacactgaattatgtgattttctcaaattactagtggtgtcgacgtgtctgtgttcgtatcgtgtccagtgtc 13360463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 34073362 - 34073438
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||  |||||||||||||| ||||  ||| ||| | |||||||||||||||||||| |||||    
T  34073362 taattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtcgtgtccagtgtc 34073438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 1700454 - 1700363
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||| |||||||||| || | ||||||||| ||| |||||||||||| ||||||  ||||||||||||| ||||| ||||| | ||||||    
T  1700454 tatgaaacacggacactccttgaattaggcgtattctggtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaatta 1700363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 200
Target Start/End: Original strand, 5970122 - 5970218
Alignment:
Q  98 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcat 197  Q
    |||||||||||||||||||| ||||| |||||||| || |||||||| |      ||||||||||| ||||||||||| || ||| ||||| ||||||||    
T  5970122 gtaattacactgaattatgtgattttttcaaattattaactgtgtcgac------gtgtccgtgtcatgtccggtgtccgtgtccgtatctgtgcttcat 5970215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 6898276 - 6898367
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||  |||||||| |||  ||||| |||| ||||||||| | |||||||||    
T  6898276 gtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtgtccatatcgtgtccg 6898367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 175
Target Start/End: Original strand, 10339146 - 10339217
Alignment:
Q  104 acactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||||| |||||||||||||| | || |||||||||| ||||||| | |||||||||| |||||    
T  10339146 acactgaattatgtgattttctcaaattaatcgcggtgtcggcgtgtcagtgttcatgtcgtgtcctgtgtc 10339217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 7930364 - 7930266
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||| |||||| | |||| |||| |||||||| ||||| |||||||| ||  ||||||||| | |||||||||||   |||||||||||||||||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccgttctgtgtccggtgtctgtatcc 7930266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 4878007 - 4877918
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||||||| |||||| ||||||| ||| |||||||| | |||| |||||||| |||||||||||| || ||| | ||||||||||||    
T  4878007 gtgtccgacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgtcactatccgtgtcgtgt 4877918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 148
Target Start/End: Original strand, 7801155 - 7801220
Alignment:
Q  83 ccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||| |||||| |||||||| ||||||||||| ||||| |||||||| ||| |||||||||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgt 7801220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 30866159 - 30866240
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 180  Q
    |||||||| |||||||||| |||||||||||||| |||| |||| || || || ||||| ||||| ||||||||||| ||||    
T  30866159 taattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccggtgtccgtat 30866240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 33001284 - 33001388
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||   |||||||| | |||||||| ||||| |||||||| |||| |||||||||| ||| || |||||| |||||| ||||||||    
T  33001284 gtgtccgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtcattgaccgtgttgtgtcc-gtgtctgt 33001382  T
Q  179 atcctt 184  Q
    | ||||    
T  33001383 accctt 33001388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 172
Target Start/End: Original strand, 17327655 - 17327743
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 172  Q
    ||||||||||||   || ||||||| |||||||| ||||||||||| |  ||| ||||||||||||||| ||||  |||||||||||||    
T  17327655 cgacactgacacatatagttacactaaattatgtgattttctcaaaatcttagttgtgtcggcgtatcactgtctatgtcgtgtccggt 17327743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 18367880 - 18367781
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||| ||| ||| ||||||| |||  | ||||||||||||||| || |||||| |||||||||||||||| || ||| ||||  |||||||||    
T  18367880 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc-gtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 18367782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 19044508 - 19044432
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||| |||||||||||||| || ||||||||||| |||  |||||||||| ||||||||| |||||| | |||||||    
T  19044508 taataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtgtccatgtcgtattcggtgtc 19044432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 31384979 - 31384931
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  31384979 cgacactgacacttgtaattacactgaattatgtgattttttcaaatta 31384931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 31579222 - 31579311
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||||||| || | |||| || ||  |||||||| |||||||||||    
T  31579222 gtgtccgacaccgacaca--taattacactgaattatgtgattttctcaaattattaacggtgttggtgtggcagtgtccatgtcgtgtccg 31579311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 5000642 - 5000717
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||| ||||||| |||| |||||||| ||||| |||| |||||| ||| ||||| |||||||| |||||||||||    
T  5000642 aattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtc 5000717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 168
Target Start/End: Complemental strand, 7086905 - 7086770
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgt-tccggtgtccgacact-----gacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||| ||| |||||||||||| ||| ||  ||||| ||||||     |||||   |||||||||| |||||||| ||||||||||||||    
T  7086905 cctatgaagcacggaaactcctcggattaggcatgtctcacgtgtctgacactacaccgacacatataattacactaaattatgtgattttctcaaatta 7086806  T
Q  133 ctagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
     |||| ||| || ||| || ||||| ||||||||||    
T  7086805 ttagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 15489733 - 15489816
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||| |||||| ||||||||| |||||| ||| ||||| |||||||| ||| ||||||| ||| | ||||||||||| |||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgttgtgtc 15489816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 1532284 - 1532207
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagc--tgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    ||||||||||||||||||| ||||| |||||||| ||||  ||||||| ||| |||||||  ||||||||| ||||||    
T  1532284 taattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtcgtgttcggtgt 1532207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 17327589 - 17327639
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||| |||||||||||||||| || ||||| |||||    
T  17327589 cctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacac 17327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 26562733 - 26562671
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 161  Q
    ||||||||||||||||||| |||||||||||||  |||| |||||||||| || |||| ||||    
T  26562733 taattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtg 26562671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 32978894 - 32978964
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgt-cattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||| |||||| ||||||||||| ||||||||   |||| |||||||| |||||||||||||||    
T  32978894 gtgtccgacaccgacacttgtaattacacttaattatgtgttttttttcaaattattagctgtgtcggcgt 32978964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 80 - 129
Target Start/End: Original strand, 6751878 - 6751927
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaa 129  Q
    |||||||||| |||||| || |||||| ||||||||||||||||||||||    
T  6751878 tgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaa 6751927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 8931617 - 8931666
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||| |||||||||||| |||||||||||||  |||||||||||||||    
T  8931617 taattatactgaattatgttattttctcaaatttttagctgtgtcggcgt 8931666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 113 - 182
Target Start/End: Complemental strand, 10649358 - 10649289
Alignment:
Q  113 tatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||| ||||| ||||||||||| | |||||||||||||| |||  ||||||| ||||||||| ||||||    
T  10649358 tatgtaattttatcaaattactaacggtgtcggcgtatcattgtttgtgtcgtatccggtgtccgtatcc 10649289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 12868615 - 12868664
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||| ||||||| |||||||||||||||||| ||||| ||||    
T  12868615 cctatgaagcaccgacacttatcggattaggcgtgttcccgtgtcggaca 12868664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 23771642 - 23771554
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||||||||| |||| | |||||||||||||| ||| | ||||| | |||||| || |||||||||||| || ||||||||||| ||||    
T  23771642 gtgtccgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtccgtgtccgtgtcatgtc 23771554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Original strand, 1191707 - 1191763
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcg 147  Q
    |||||| |||||||||||||||| ||| | ||| |||||||| ||||||||||||||    
T  1191707 gacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcggcg 1191763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 7625166 - 7625090
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| ||| |||||| |||||||||||||||| || | |||||| ||| || ||||| |||||||||||| ||||    
T  7625166 taattatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgtccgatgtc 7625090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 7740705 - 7740610
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||||||||   |||||||||| |||| ||| |||||| ||||||| | | ||| || |||| ||||||| ||||||||||| ||||||    
T  7740705 gtgtccgacactgacacatataattacactcaattttgtgattttcacaaattatttgatgtatcagcgtgtcagtgt-cgtgtcgtgtctggtgtc 7740610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 10294151 - 10294051
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    |||||||| |||| ||||  ||| |||||||||| |||| || ||||| | ||||| |||||||||||||||||||  || ||| ||||  |||||||||    
T  10294151 taattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtcgtgtccggtgttcgtgtccgtatccgtgcttcata 10294052  T
Q  199 g 199  Q
    |    
T  10294051 g 10294051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 20371125 - 20371189
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||| ||| ||| |||||| |||||||||||||| |||| |||||||||| ||| ||||||||||    
T  20371125 taatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 20371189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 123
Target Start/End: Original strand, 26402675 - 26402719
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcatttt 123  Q
    ||||||||||| |||||| || |||||||||||||||||||||||    
T  26402675 gtgtccgacaccgacacttgtgattacactgaattatgtcatttt 26402719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 28715415 - 28715371
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||    
T  28715415 cctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtc 28715371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 80
Target Start/End: Original strand, 32839571 - 32839611
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggt 80  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  32839571 ctatgaagcacagacacttctcggattaggcgtgtcccggt 32839611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 4878062 - 4878027
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgt 74  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4878062 cctatgaagcacggacactcctcggattaggcgtgt 4878027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 7378098 - 7378055
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||||||||||| |||||| ||||| ||||||||    
T  7378098 ctatgaagcacggacacttctcagattagccgtgtcccggtgtc 7378055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 142
Target Start/End: Original strand, 7569183 - 7569226
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgt 142  Q
    ||||||||||||||||||| |||||||||||||| || ||||||    
T  7569183 taattacactgaattatgtaattttctcaaattattatctgtgt 7569226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 75
Target Start/End: Original strand, 7723199 - 7723234
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgtt 75  Q
    |||||||||||||||||| |||||||||||||||||    
T  7723199 ctatgaagcacggacactcctcggattaggcgtgtt 7723234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 34446607 - 34446576
Alignment:
Q  101 attacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  34446607 attacactgaattatgtcattttctcaaatta 34446576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 34595253 - 34595210
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 34595210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 7378043 - 7377977
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||| |||||   |||||||| |||||||||| |||||||||||||  |||| |||||||    
T  7378043 gtgtccgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcgg 7377977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 8365447 - 8365497
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||| ||| |||||||||||||||| || ||||| |||||    
T  8365447 cctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacac 8365497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  43 tgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||| ||||||||||| |||| |||||||| |||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 19294744 - 19294694
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacact 90  Q
    ||||||||||| ||||| ||| |||||||||||||  ||||||||||||||    
T  19294744 ctatgaagcaccgacacctctaggattaggcgtgtcgcggtgtccgacact 19294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 21424744 - 21424786
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgt 82  Q
    |||||||||||||||||||||| |||||| |||||| ||||||    
T  21424744 ctatgaagcacggacacttctcagattagccgtgtttcggtgt 21424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 403859 - 403912
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||| |||||| ||| ||||||| |||||||| ||||| ||||||||    
T  403859 gtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaatta 403912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 5569866 - 5569825
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||||| ||| |||||||||||||| ||||||    
T  5569866 atgaagcacggacactcctcagattaggcgtgttcaggtgtc 5569825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 7248488 - 7248439
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| |||||||| | ||||| |||||||| |||||    
T  7248488 ctatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacac 7248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 7625235 - 7625186
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||| ||||| || |||||| ||||||||||||||| |||||    
T  7625235 ctatgaagcacgaacactccttggattaagcgtgttccggtgtcggacac 7625186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 9107299 - 9107348
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||| |||||    
T  9107299 ctatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacac 9107348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 9195769 - 9195802
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||| |||||||||||||||||||||||    
T  9195769 taattacactaaattatgtcattttctcaaatta 9195802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 9658998 - 9658949
Alignment:
Q  41 tatgaagcacggacacttctcgga-ttaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||| || ||| ||||||||||||||||||| |||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacac 9658949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 10339053 - 10339102
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    ||||||||||||||||||| ||| |||||||||||| || ||||| ||||    
T  10339053 cctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 10339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 16766827 - 16766778
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||| |  ||||||||||||||| |||||||| |||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacac 16766778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 101 - 170
Target Start/End: Original strand, 17168480 - 17168549
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||||| |||||| |||||||||||||||| || | |||| ||||| ||||||||  |||| ||||||    
T  17168480 attacactaaattatatcattttctcaaattattatcagtgttggcgtgtcagtgtctatgtcatgtccg 17168549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 74
Target Start/End: Original strand, 17841530 - 17841563
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgt 74  Q
    ||||||||||||||||| ||||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgt 17841563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 129
Target Start/End: Complemental strand, 19369876 - 19369831
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaa 129  Q
    |||||| |||||| || |||||| ||||||||||||||||||||||    
T  19369876 cgacaccgacacttgtgattacattgaattatgtcattttctcaaa 19369831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 31385048 - 31385007
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgt 82  Q
    ||||||||||||||||| || ||||||||||||| |||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgt 31385007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 143
Target Start/End: Original strand, 32511664 - 32511725
Alignment:
Q  82 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||  |||||  ||||||||||||||||||| ||||||| |||||| |||| |||||    
T  32511664 tccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtc 32511725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #99
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 2153902 - 2153978
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||| |||||| ||||||||| |||||| |    |||||||||| || ||||||||||| |||||| ||||    
T  2153902 taattacactaaattatatcattttcttaaattattgttcgtgtcggcgtgtcggtgtccgtgtcatgtccgatgtc 2153978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #100
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 162
Target Start/End: Complemental strand, 2224271 - 2224207
Alignment:
Q  98 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 162  Q
    |||||||||||||||||| | ||||| | |||||| |||||| |||| | ||||||| |||||||    
T  2224271 gtaattacactgaattatatgatttttttaaattattagctgcgtcgacatatcagtatccgtgt 2224207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #101
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Complemental strand, 7112837 - 7112781
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgt 140  Q
    ||||||||||||   |||||||| | |||||| ||||||||||||||||||| ||||    
T  7112837 cgacactgacacatataattacatttaattatttcattttctcaaattactatctgt 7112781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #102
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 8781308 - 8781364
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgt 140  Q
    ||||||||||||   |||||||| | |||||| ||||||||||||||||||| ||||    
T  8781308 cgacactgacacatataattacatttaattatttcattttctcaaattactatctgt 8781364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 9024176 - 9024224
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||   | |||||| |||||||||||||||||||||||||    
T  9024176 cgacactgacacatatgattacattgaattatgtcattttctcaaatta 9024224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 10760870 - 10760918
Alignment:
Q  113 tatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 161  Q
    |||||||||||||||||||| || | |||||| ||| ||||||||||||    
T  10760870 tatgtcattttctcaaattattatcagtgtcgacgtgtcagtgtccgtg 10760918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 11591885 - 11591917
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatt 131  Q
    ||||||||||||||||||| |||||||||||||    
T  11591885 taattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 16388212 - 16388248
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattat 115  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  16388212 gtgtccgacaccgacacttgtaattacactgaattat 16388248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #107
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 16388248 - 16388311
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||||||||||| ||||| |||||||| | ||| | ||| ||| ||||||||||||||    
T  16388248 taattacactgaattatgtgattttttcaaattatttgct-tatcgacgtgtcagtgtccgtgtc 16388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #108
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 160
Target Start/End: Original strand, 19147431 - 19147479
Alignment:
Q  112 ttatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    |||||| |||||||||||||| |||||||||| | || |||||||||||    
T  19147431 ttatgtgattttctcaaattattagctgtgtccgtgtgtcagtgtccgt 19147479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #109
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 32511606 - 32511654
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| ||| ||||||||||| |||| |||| ||||    
T  32511606 ctatgaagcacggacactcctccgattaggcgtgctccgatgtcagaca 32511654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 6e-34; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 23292981 - 23293102
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| ||||||| |||||||||||| ||||| |||||||| ||||||||||||||| ||| |||||||||||||||||||||| ||    
T  23292981 gtgtccgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgt 23293080  T
Q  179 atccttatctatgcttcatagg 200  Q
     ||| ||||| |||||||||||    
T  23293081 gtccgtatctgtgcttcatagg 23293102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 163
Target Start/End: Complemental strand, 30299049 - 30298926
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagc 137  Q
    ||||||||||||||||||| |||||||||| ||||| ||||    |||||| |||||| |||||||||||||||||||||||||| | ||||||| ||||    
T  30299049 cctatgaagcacggacactcctcggattagacgtgtcccggca--cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagc 30298952  T
Q  138 tgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| ||||||||||||||    
T  30298951 tgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 163
Target Start/End: Complemental strand, 30327917 - 30327794
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagc 137  Q
    ||||||||||||||||||| |||||||||| ||||| ||||    |||||| |||||| |||||||||||||||||||||||||| | ||||||| ||||    
T  30327917 cctatgaagcacggacactcctcggattagacgtgtcccggca--cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagc 30327820  T
Q  138 tgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| ||||||||||||||    
T  30327819 tgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 36635368 - 36635268
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||||||||||| |||||||||||||| |||  |||| ||||| |||||||||| |||||||||||||||||| |||||||| ||||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccgagtcgtgtccggtgtctgtgtccttatccatgcttcata 36635269  T
Q  199 g 199  Q
    |    
T  36635268 g 36635268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 21945566 - 21945471
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||| |||||| |||||||||||||||||||||||||| |||||||| ||||||||||||| | |||||||| ||||| |||||||||||    
T  21945566 tgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccggtgtc 21945471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 199
Target Start/End: Original strand, 10499227 - 10499383
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||||||||||||| | ||||||||||||||||  ||| |||||||||||||||   |||||||||| |||||||| |||||||||| ||  ||| ||    
T  10499227 ctatgaagcacggacaatcctcggattaggcgtgtgtcgg-gtccgacactgacacatataattacactaaattatgtgattttctcaagtt-ttagatg 10499324  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    |||||| || |||||||| |||| ||||| |||||| |||||  |||| |||||||||||    
T  10499325 tgtcggtgtgtcagtgtcagtgt-gtgtctggtgtccgtatctgtatccatgcttcatag 10499383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 22440559 - 22440684
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg 141  Q
    |||||||||||||||| |||||||||||||||| |  ||||| ||||| | |||   ||||||||||||||||||| |||||||||||||| || | |||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacac-gtcacatataattacactgaattatgtgattttctcaaattattaacggtg 22440657  T
Q  142 tcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||  |||||||||||| |||||||||    
T  22440658 tcgatgtatcagtgtccatgtcgtgtc 22440684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 37203371 - 37203264
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgt-----ccgacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    ||||||||||||||||||||||||||||| ||||| |||||||     |||||||| ||||| ||||||||||| |||||||||||||| |||||||| |    
T  37203371 ctatgaagcacggacacttctcggattagacgtgtcccggtgtcggacccgacact-acacttgtaattacactaaattatgtcattttttcaaattatt 37203273  T
Q  135 agctgtgtc 143  Q
    ||| |||||    
T  37203272 agccgtgtc 37203264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 12895269 - 12895389
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| ||||||  |||||||||  |||||||| ||||| |||||||| ||  ||||||||||| ||| ||| |||||||| ||||||||| ||    
T  12895269 gtgtccgacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgtcattgttcgtgtcgtatccggtgtccgt 12895368  T
Q  179 atccttatctatgcttcatag 199  Q
    |||| ||||| || |||||||    
T  12895369 atccgtatctgtgtttcatag 12895389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 92 - 200
Target Start/End: Complemental strand, 19482719 - 19482611
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatg 191  Q
    ||||| |||||||||| ||||||||| || || |||||||| ||| ||||||||||| |||||||| |||||||||| ||||||||| | | ||||  ||    
T  19482719 acacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtgtctgtgttcgtatccgtg 19482620  T
Q  192 cttcatagg 200  Q
    |||||||||    
T  19482619 cttcatagg 19482611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 24343551 - 24343475
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||| |||||||||||||| || | |||||||||| || | |||||||||||||||||||||    
T  24343551 taattacactgaattatgtaattttctcaaattattatccgtgtcggcgtgtcggcgtccgtgtcgtgtccggtgtc 24343475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 49431090 - 49430998
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||||| | ||||||| ||||||||||||||| ||| |||||| ||||||||||    
T  49431090 gtgtccgacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccgagtcgtgtccg 49430998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 12797333 - 12797423
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||| | || |||||| |||||||||||||||| ||||    
T  12797333 gtgtccgacaccgacacttgtaattacactgaattatgtgatttt-tcaaattattagttttgccggcgtgtcagtgtccgtgtcgtatccg 12797423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 199
Target Start/End: Complemental strand, 20633591 - 20633429
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac-----tcgtaattacactgaattatgtcattttctcaaattac 133  Q
    ||||||||||||| ||||| || |||||||||||||   |||||||||||| |||||     | ||||||||| ||||||||||   ||| ||||||||     
T  20633591 cctatgaagcacgaacactccttggattaggcgtgtcttggtgtccgacaccgacacgacacttgtaattacattgaattatgt---tttttcaaattat 20633495  T
Q  134 tagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    |||| |||||| ||| ||||||||||| ||||||| |||||| || ||| ||||  ||||||||||    
T  20633494 tagcggtgtcgacgtgtcagtgtccgtatcgtgtctggtgtccgtgtccgtatccgtgcttcatag 20633429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 3947766 - 3947852
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||||| |||||||||||||||||||  ||||| |||||||| ||||||||||||| | || ||||| |||| |||||||    
T  3947766 cgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgtggtgtccg 3947852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 181
Target Start/End: Complemental strand, 28084581 - 28084483
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    |||||| |||||| ||||||||| |||||||||| ||||| | ||||||  ||||||||||||||| |||| ||| ||||||||||||||||| |||||    
T  28084581 cgacacagacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcagcgtctgtgtcgtgtccggtgtccgtatc 28084483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 30094134 - 30094066
Alignment:
Q  38 ccctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattaca 106  Q
    ||||||| ||||||||||||  ||||||||||||||| |||||||||||||| |||||| |||||||||    
T  30094134 ccctatgtagcacggacactcttcggattaggcgtgtcccggtgtccgacaccgacacttgtaattaca 30094066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 35157980 - 35158076
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||| ||||| ||||||  |||||||||| |||||||| |||||  ||||||| ||| || |||||||| ||||||||||||| ||||||||||||    
T  35157980 gtgtcagacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccgtgttgtgtccggtgtc 35158076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 11596296 - 11596425
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac-----------tcgtaattacactgaattatgtcattttctca 127  Q
    ||||||||||||||||||| ||| |||||||||||| ||| |||| |||| ||||||           | |||||||||||||||||||| ||||| |||    
T  11596296 cctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacaatgacacgacacctacacttgtaattacactgaattatgtgattttttca 11596395  T
Q  128 aattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||| ||||| ||| ||||||||||||||    
T  11596396 aattattagctttgttggcgtatcagtgtc 11596425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 14126117 - 14126224
Alignment:
Q  90 tgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatcta 189  Q
    |||||||  ||||||||||||||||||| | ||| |||||||| || | |||||||||| | |||||| |||||||||||  ||||||| ||  ||||||    
T  14126117 tgacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtccactgtctgtgtctgtatcta 14126216  T
Q  190 tgcttcat 197  Q
    ||||||||    
T  14126217 tgcttcat 14126224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 848009 - 847923
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccgg 171  Q
    ||||| |||||| ||||||| | |||||||||| |||||||||||||| |||| |  ||||||| |||||||| |||||||||||||    
T  848009 gacaccgacacttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccgg 847923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 40481687 - 40481610
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||| ||| ||||||| |||||||| ||||||||||||    
T  40481687 acacttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 40481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 16303266 - 16303351
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    |||||| |||||| ||||||||||| |||||| ||||||| ||||| || || || ||||||||| ||||||||||| ||||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtgtccgtatcgtgtcc 16303351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 167
Target Start/End: Original strand, 2361970 - 2362058
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||||||| ||||||  |||||||||| |||||||| ||||| |||||||| |||||||||||| || ||| ||||  ||||||||    
T  2361970 gtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtcaatgtcgtgt 2362058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 5414187 - 5414263
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| ||| ||| ||||||| |||  | ||||||||||||||| || |||||||||||||||||||||||    
T  5414187 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtcgtgtccggtgtc 5414263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 7012105 - 7012041
Alignment:
Q  104 acactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||||||||||||||||||||||||||| || | |||||||||| || ||||||||||| ||||    
T  7012105 acactgaattatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtgtcctgtc 7012041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 132
Target Start/End: Original strand, 17425348 - 17425437
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||| |||||| |||||||||||||||| |  ||||| ||||| ||||  | ||||||||||||||||||  ||||||||||||||    
T  17425348 tatgaagcacagacactcctcggattaggcgtgtccttgtgtctgacacagaca--cataattacactgaattatgcgattttctcaaatta 17425437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 28964243 - 28964307
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||    
T  28964243 gtgtccgacacagacacttgtaattacactgaattatgtgattttttcaaattattagctatgtc 28964307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 20743295 - 20743350
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 156  Q
    |||||||||||||||||||||||||||||||| || | |||||||||| |||||||    
T  20743295 attacactgaattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgt 20743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 27706177 - 27706268
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||| ||||| ||||||||||| |||||||| ||||| | |||||| ||  ||||||| ||| ||||||||| ||||||||| ||||||    
T  27706177 cgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtccctgtcgtgtctggtgtc 27706268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 34306799 - 34306889
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||| |||||| |||||||||||  ||||| | ||||| |||||||| ||| |||||||||||||||||||| || | |||||||    
T  34306799 gtgtccgacaccgacacttgtaattacactacattatctgatttt-tcaaattattagttgtgtcggcgtatcagtgtctgtattgtgtccg 34306889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 38847010 - 38847073
Alignment:
Q  82 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||||||| ||||||||||||||| || | ||||| |||||||| ||||||||||||    
T  38847010 tccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcgg 38847073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 8423713 - 8423779
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||| |||| |  ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  8423713 gtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattagcggtgtcgg 8423779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 16189813 - 16189721
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccgg---tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatt 131  Q
    |||||||| ||||||||||| |||||| | ||| ||||   |||||| ||| ||||| | ||||||||||||||||||| |||||||||||||    
T  16189813 atgaagcatggacacttctcagattagccatgtcccggctgtgtccgtcaccgacacacataattacactgaattatgtgattttctcaaatt 16189721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 82
Target Start/End: Original strand, 35157925 - 35157967
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgt 82  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgt 35157967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 35161156 - 35161106
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||    
T  35161156 cctatgaagcacggacacttttcggattaggtgtgttccggtgtcggacac 35161106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 54580018 - 54580087
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||||| |||||||| ||| |||||| ||||    
T  54580018 gtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 160
Target Start/End: Complemental strand, 4383426 - 4383351
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||||||||| | |||||||||||||||||||| ||||| |||||||| ||| ||| ||| ||| |||||||||||    
T  4383426 cgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtccgt 4383351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 11651142 - 11651218
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||| ||| || ||||||||||||| ||||| | |||||| ||||||||||| ||| ||||||||||| |||||||    
T  11651142 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 11651218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 12708261 - 12708213
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||||    
T  12708261 ctatgaagcacggacgctcctcggattaggcgtgttccgatgtccgaca 12708213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 150
Target Start/End: Original strand, 4672104 - 4672151
Alignment:
Q  103 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtat 150  Q
    ||||||||||||||| |||||| ||||||| |||||||||||||||||    
T  4672104 tacactgaattatgtaattttcccaaattattagctgtgtcggcgtat 4672151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 20521873 - 20521940
Alignment:
Q  108 tgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||| ||||| |||||||| || | || ||||||| ||||||||||||||||||| ||||||    
T  20521873 tgaattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtctggtgtc 20521940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 29205508 - 29205445
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgt 142  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||| |||||||| |||| ||||    
T  29205508 gtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattagccgtgt 29205445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 35723384 - 35723470
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtc-attttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||||   |||||||| ||||||||||  |||||||||||||| |||| |||||||||| ||||||| | |||||||||||    
T  35723384 cgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgt-catgtcgtgtccg 35723470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 51701317 - 51701258
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||| ||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  51701317 cgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 18844423 - 18844457
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||||||||||||||||||||    
T  18844423 ctatgaagcacggacacttctcggattaggcgtgt 18844457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 180
Target Start/End: Complemental strand, 28720916 - 28720840
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 180  Q
    |||||||| ||||| | ||||| |||||||| ||||||||||||| | ||||||| |||||||||||| ||||||||||    
T  28720916 ttacactgcattatatgatttt-tcaaattattagctgtgtcggcatgtcagtgttcgtgtcgtgtcc-gtgtctgtat 28720840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 32910595 - 32910549
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    |||||||||||||||||||||||||||||||||| || | |||||||    
T  32910595 taattacactgaattatgtcattttctcaaattattatccgtgtcgg 32910549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 42640593 - 42640521
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtca---ttttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||| |||||| |||||||||||||||||||| |   |||| ||||||||  ||||||||||||||    
T  42640593 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgt 42640521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 903966 - 903905
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||||||||||||||||| |||||||||||||| || | ||| ||| || |||||||||||    
T  903966 taattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtccgt 903905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 30522933 - 30522994
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||||||||||||| |||||||||||| | |||| ||||  |||||||||| ||||||||    
T  30522933 ttacactgaattatgtgattttctcaaataattagcggtgtgagcgtatcagtatccgtgtc 30522994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 30838254 - 30838185
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||||||| |||||| | ||||| |||||||| |||| || ||| |||||||||||||||| ||||||    
T  30838254 taattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtccgtgccgtgtc 30838185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 30982878 - 30982966
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| ||||||  ||||||||||||| ||||| |||||||||||| | |||| ||   ||||| || ||||||||||||| |||||||||    
T  30982878 cgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggt---ggcgtgtctgtgtccgtgtcgtatccggtgtc 30982966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 40613494 - 40613445
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||||||||||| ||||||||||| || |||| ||||||||||    
T  40613494 taattacactgaattatgtgattttctcaaaatattagcggtgtcggcgt 40613445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 715545 - 715593
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 752871 - 752919
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 5775303 - 5775343
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccgg 79  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  5775303 cctatgaagcacggacactcctcggattaggcgtgtcccgg 5775343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 8423658 - 8423706
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||| ||||||||||||||| |||||||||||| |||||||| ||||    
T  8423658 ctatgacgcacggacacttctccgattaggcgtgtcccggtgtcggaca 8423706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 13783325 - 13783261
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||||||| ||| || ||||||||| | |||| ||||||| || ||||||||||||||    
T  13783325 taattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 16402226 - 16402302
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| || |||| |||||||||||||| || | |||||||| | ||||||| | |||||||| |||||||    
T  16402226 taattacactgtatcatgttattttctcaaattattatccgtgtcggcatgtcagtgttcatgtcgtgtgcggtgtc 16402302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 40784073 - 40784029
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  40784073 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 53381529 - 53381573
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||    
T  53381529 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtc 53381573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 752941 - 753031
Alignment:
Q  92 acactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||| |||||||||||||||||||| | |||| | |||||| |||||||||||| || | || ||  ||||||||||| ||||||||||||    
T  752941 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtcc-gtgtctgtatcc 753031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 74
Target Start/End: Original strand, 3064867 - 3064902
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgt 74  Q
    ||||||||||||||||||| ||||||||||||||||    
T  3064867 cctatgaagcacggacactcctcggattaggcgtgt 3064902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 16073458 - 16073380
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 158  Q
    ||||||||||| |||||| |||||||||||||||||||  ||||| |||||||| ||  ||||| ||||| |||| ||||    
T  16073458 gtgtccgacaccgacacttgtaattacactgaattatgcgatttt-tcaaattattacttgtgttggcgtgtcagagtcc 16073380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 24613702 - 24613761
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    ||||| |||||| ||| ||||| |||||||||| |||||||||||||| ||| |||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcg 24613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 26504314 - 26504393
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||||| ||| | ||||||| |||||| |||| ||||||  || |||||||||||||| | |||||| |||||    
T  26504314 taattacactgaactatttgattttcttaaattattagcagtgtcgatgtttcagtgtccgtgtcatatccggtatctgt 26504393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 132
Target Start/End: Original strand, 31243565 - 31243596
Alignment:
Q  101 attacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  31243565 attacactgaattatgtcattttctcaaatta 31243596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 36635449 - 36635406
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||    
T  36635449 ctatgaagcacggacactcttcggattaggcgtgtcccggtgtc 36635406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 3144587 - 3144621
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||||||||||||||| ||||    
T  3144587 ctatgaagcacggacacttctcggattaggtgtgt 3144621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 4383484 - 4383443
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||| ||||||||||||||| |||||||||    
T  4383484 tatgaagcacggacactcctcggattaggcgtg-tccggtgtc 4383443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 129
Target Start/End: Complemental strand, 13307941 - 13307891
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaa 129  Q
    |||||||||||  ||||| || |||||| ||||||||||||||||||||||    
T  13307941 gtgtccgacaccaacacttgtgattacattgaattatgtcattttctcaaa 13307891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 129
Target Start/End: Complemental strand, 13484095 - 13484037
Alignment:
Q  72 tgttccggtgtccgacactgacactcgtaattaca-ctgaattatgtcattttctcaaa 129  Q
    |||||| |||||||||||||||||| || ||||||  |||||||||| |||||||||||    
T  13484095 tgttccagtgtccgacactgacacttgtgattacatttgaattatgttattttctcaaa 13484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 15029809 - 15029751
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||||||||||||||||| || || |||||||| |||| ||||| |||| ||||||||    
T  15029809 taattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtgtc 15029751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 18513174 - 18513224
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||| ||| |||||||||||| | |||||| |||||    
T  18513174 cctatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacac 18513224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 23292926 - 23292960
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgt 23292960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 34515892 - 34515958
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||||||||||||||||||||||  ||||| || | |||||| ||| ||||||| ||||| |||||    
T  34515892 ttacactgaattatgtcattttcttgaattattatccgtgtcgacgtgtcagtgttcgtgttgtgtc 34515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 35161100 - 35161034
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||| |||| |||  ||||||||||||||||||| |||||||  ||||| |||| |||||||    
T  35161100 gtgtccgactctgatacttataattacactgaattatgtgattttcttgaattagtagcagtgtcgg 35161034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 177
Target Start/End: Original strand, 40179631 - 40179729
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 177  Q
    ||||||||||| ||| |   ||||||||||||||||||| ||||| ||||| || ||   |||||  ||| |||||||||||||| ||| |||||||||    
T  40179631 gtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgttcggtgtctg 40179729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 1747256 - 1747207
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||| |||||||||||| |||||||||| ||| |||| ||||||||||    
T  1747256 taattaaactgaattatgtgattttctcaatttattagcggtgtcggcgt 1747207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 6879443 - 6879504
Alignment:
Q  63 gattaggcgtgttccg-gtgtccgacactgacactcgtaattacactgaattatgtcatttt 123  Q
    |||||||||||||  | ||||||||||| |||||| ||||||||||| |||||||| |||||    
T  6879443 gattaggcgtgttatgcgtgtccgacaccgacacttgtaattacacttaattatgtgatttt 6879504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 16184861 - 16184799
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||| ||||||||| ||| |||||||||||||| ||||   |||||||| ||||||||||||||    
T  16184861 taatttcactgaattgtgtgattttctcaaattattagc--ggtcggcgtgtcagtgtccgtgtc 16184799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 16886726 - 16886677
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||| ||||||||||||||||  |||||| |||||||||||||| |||||    
T  16886726 ctatcaagcacggacacttctgagattagccgtgttccggtgtcggacac 16886677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 24343632 - 24343583
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| ||| || ||||||||| |||||||| |||||    
T  24343632 ctatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacac 24343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 26276024 - 26276057
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatta 132  Q
    |||||||| |||||||||||||||||||||||||    
T  26276024 taattacattgaattatgtcattttctcaaatta 26276057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 36386226 - 36386259
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||||||||||| |||||||||||||    
T  36386226 taattacactgaattatgtccttttctcaaatta 36386259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 3947702 - 3947750
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||| ||||||||||| |||| | |||||| |||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacac 3947750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 4157213 - 4157150
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||| |||||| |||||| |||| |||||||| ||||| |||||||| ||| ||||||    
T  4157213 gtgtccgacaccgacacttgtaattgcactaaattatgtgatttt-tcaaattattagttgtgtc 4157150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 98 - 201
Target Start/End: Complemental strand, 12708192 - 12708088
Alignment:
Q  98 gtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttca 196  Q
    |||||||||||||||||| ||||||| |  |||||| ||| |||||| |||| |||||||| | |||||||| | |||| || ||| |||   |||||||    
T  12708192 gtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtgtctgcgtcgtgtctgatgtccgtgtccgtattcgtgcttca 12708093  T
Q  197 tagga 201  Q
    |||||    
T  12708092 tagga 12708088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 13117502 - 13117446
Alignment:
Q  70 cgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctc 126  Q
    ||||| || ||||||||||| |||||| || |||||| |||||| ||||||||||||    
T  13117502 cgtgtcccagtgtccgacaccgacacttgtgattacattgaattttgtcattttctc 13117446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Complemental strand, 28084640 - 28084600
Alignment:
Q  43 tgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||| |||||||||||||||| || |||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtc 28084600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 29205587 - 29205539
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||| ||||| |||||||||||||||| || ||||| ||||    
T  29205587 ctatgaagcacgaacactcctcggattaggcgtgtcccagtgtcggaca 29205539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 30982808 - 30982856
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||  | ||||||||||||| |||||||| |||||    
T  30982808 tatgaagcacggacactctttggattaggcgtgtcccggtgtcggacac 30982856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 144
Target Start/End: Original strand, 38148741 - 38148785
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    |||||||||||||||||| ||||||||||| || |||| ||||||    
T  38148741 aattacactgaattatgtgattttctcaaactattagcggtgtcg 38148785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 40742635 - 40742559
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||  ||||| | |||||||||||||| ||   |||||||||| ||| |||||||||||| ||| |||||    
T  40742635 taattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtcgtatccagtgtc 40742559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 56257977 - 56257933
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||||||||| | |||||||||||||| |||| |||||    
T  56257977 taattacactgaattatatgattttctcaaattattagcagtgtc 56257933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 39 - 181
Target Start/End: Complemental strand, 20280 - 20134
Alignment:
Q  39 cctatgaagcacggac---acttctcggattaggcgtgttccggtgtc-cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    ||||||||||||||||   ||| |||||||||||||||| ||   | | ||||||||||||| |||||||||||||||||||| ||||| |||||||| |    
T  20280 cctatgaagcacggactgtactcctcggattaggcgtgtcccaccgacacgacactgacacttgtaattacactgaattatgtgattttttcaaattatt 20181  T
Q  135 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    |||||||||||||| ||| |||||||||||||||||||||| |||||    
T  20180 agctgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatc 20134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 8862 - 8741
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| ||||||||||| ||| || | ||||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||    
T  8862 gtgtccgacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgt 8763  T
Q  179 atccttatctatgcttcatagg 200  Q
     ||| |||| ||||||||||||    
T  8762 gtccgtatccatgcttcatagg 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 90)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 27945100 - 27945002
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||| |||||| |||||||||||||||||||| |||||||||||||| |||  |||||||||| |||||||||||||||||||||||||| ||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatcc 27945002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 28155673 - 28155565
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||||||||||||| | || ||||||||||||| | |||||||||||| |||||| |||||||||| ||||||||| |||||||||||||| |||| |    
T  28155673 ctatgaagcacggacattccttggattaggcgtgtcctggtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcgg 28155574  T
Q  140 tgtcggcgt 148  Q
    |||||||||    
T  28155573 tgtcggcgt 28155565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 84 - 187
Target Start/End: Complemental strand, 24339701 - 24339598
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| ||||| |||||||||||||||| ||||||     
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccggtgtccgtatccg 24339602  T
Q  184 tatc 187  Q
    ||||    
T  24339601 tatc 24339598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 13770743 - 13770659
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||||||||||||||||| ||||| | |||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13770743 gacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgtc 13770659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 40 - 167
Target Start/End: Complemental strand, 30813916 - 30813788
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactga-cactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    |||||||||||||||||| |||||||||||||||||| | |||| |||||  | |||  |||||||||||||||||||| |||||||||||||| ||||     
T  30813916 ctatgaagcacggacactcctcggattaggcgtgttctgatgtcggacacgcaacacctgtaattacactgaattatgtaattttctcaaattattagca 30813817  T
Q  139 gtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
     |||||| ||||||||||| || ||||||    
T  30813816 atgtcggagtatcagtgtctgtctcgtgt 30813788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 25481966 - 25481870
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||  ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||| ||||| ||| ||||||| ||||    
T  25481966 gtgtccgacaccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgtc 25481870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 43250037 - 43249961
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||||||||||||||||||| || | |||||||||| |||||||||||||| |||||||||||    
T  43250037 taattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccggtgtc 43249961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 5409836 - 5409951
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||||| |||||| ||||||||||||| ||||| |||||||| ||||||| || |||| ||||||||| |||||| |||||||||||| ||      
T  5409836 cgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtccatgtcgtatccggtgtctgtgtctg 5409935  T
Q  184 tatctatgcttcatag 199  Q
    ||||  ||||||||||    
T  5409936 tatccgtgcttcatag 5409951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 24105730 - 24105651
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| ||||||||||||||| |||  ||||| |||||||| ||||||||||||||| |||||||||||||||||||||    
T  24105730 gacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 26733368 - 26733265
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||   |||||| |||||||||||| ||||| |||||||| |||| |||||| ||| ||||||||||||||||||| |||||| ||    
T  26733368 gtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtctggtgtcggt 26733269  T
Q  179 atcc 182  Q
    ||||    
T  26733268 atcc 26733265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 11061071 - 11061189
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||| ||||| |||||| ||||||| ||| |||||||| ||||| |||||||| |||||||||||| || |||||||||||||||| |||| |||| ||    
T  11061071 gtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgtccgt 11061170  T
Q  179 atccttatctatgcttcat 197  Q
     ||| ||||  ||||||||    
T  11061171 gtccgtatccgtgcttcat 11061189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 47 - 163
Target Start/End: Original strand, 18215144 - 18215265
Alignment:
Q  47 gcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg 141  Q
    ||||||||||| ||| |||||||||||| ||||||||     |||||| |||||| |||| ||||||| ||||||| ||||| |||||||| |||||| |    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcg 18215243  T
Q  142 tcggcgtatcagtgtccgtgtc 163  Q
    ||||||| | ||||||||||||    
T  18215244 tcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 23191960 - 23191879
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||| |||||||| ||  |||||||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||||||    
T  23191960 gtgtctgacactgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgt 23191879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 43027469 - 43027560
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||| ||| |||||||| ||||||| ||||| |||||||| |||||| |||| ||| |||||||||||||||||||| |||||    
T  43027469 cgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtccagtgtc 43027560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 18233613 - 18233694
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagc--tgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||||||||||||||||||||||||||||| |  |||||| | |||||||| || ||||| ||||||||||||||    
T  18233613 taattacactgaattatgtcattttctcaaattactatctgtgtgtctgtgtatcagtatcagtgtcatgtccggtgtctgt 18233694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 35862071 - 35861959
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc---cgacactgacactcgtaattacactgaattatgtcattttctcaaattacta 135  Q
    ||||||||||||||||||| |||||||||||||||| |  |||||   |||||| ||||||   ||||||| |||||||||| ||||| |||||||| ||    
T  35862071 cctatgaagcacggacactcctcggattaggcgtgtcctcgtgtccgacgacacagacacttacaattacattgaattatgtgattttttcaaattatta 35861972  T
Q  136 gctgtgtcggcgt 148  Q
    | |||||||||||    
T  35861971 gttgtgtcggcgt 35861959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 11722121 - 11722186
Alignment:
Q  107 ctgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 172  Q
    ||||||||||| |||||||||||||  |||| |||||||||| |||||||||||||||||||||||    
T  11722121 ctgaattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggt 11722186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 100 - 200
Target Start/End: Complemental strand, 30731080 - 30730980
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    |||||||||||||||||| |||||||||||||| | || ||||||||||  || |||  |||||||||| |||||| || ||| ||||| ||||||||||    
T  30731080 aattacactgaattatgtgattttctcaaattattcgcggtgtcggcgtgccactgtatgtgtcgtgtctggtgtccgtgtccgtatctgtgcttcatag 30730981  T
Q  200 g 200  Q
    |    
T  30730980 g 30730980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 18213028 - 18213150
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattact-agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 177  Q
    ||||||||||| |||||   |||||||||| |||||||| ||||||| |||  | | || ||||||||||||||||||||||||||||||| |||||  |    
T  18213028 gtgtccgacaccgacacatataattacactaaattatgtgattttctaaaaaaaattagttgtgtcggcgtatcagtgtccgtgtcgtgtctggtgttcg 18213127  T
Q  178 tatccttatctatgcttcatagg 200  Q
    | | | ||||| |||||||||||    
T  18213128 tgttcgtatctgtgcttcatagg 18213150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 21880216 - 21880158
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 137  Q
    ||||||||||| |||||| |||||||||||||||||||| |||||||||||||| ||||    
T  21880216 gtgtccgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagc 21880158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 32308163 - 32308105
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 158  Q
    |||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 598327 - 598278
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 4017811 - 4017888
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||||| |||||| || ||||||||||||| || | |||||||||| || ||||||||||||||||| ||||||||    
T  4017811 attacactaaattatatcgttttctcaaattattatccgtgtcggcgtgtcggtgtccgtgtcgtgtccagtgtctgt 4017888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 9483040 - 9482917
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattacta 135  Q
    |||||||||||||||||||||| ||||| ||||| ||||||||     |||||| |||||   ||||||||||||||| ||| ||||||||||||||  |    
T  9483040 tatgaagcacggacacttctcgtattag-cgtgtcccggtgtcgcgtccgacaccgacacatataattacactgaattgtgtgattttctcaaattatca 9482942  T
Q  136 gctgtgtcggcgtatcagtgtccgt 160  Q
    ||  |||||| || |||||||||||    
T  9482941 gcgatgtcggtgtgtcagtgtccgt 9482917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 22868086 - 22868015
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||||||||||| ||||||||| |||| |||  |||||||||| |||||||| |||| |||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgttgtgtccg 22868015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 29763129 - 29763268
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac-tgacactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    |||||||||||||||||| |||||||||||||||| | | |||| ||||| || |    |||| |||||| |||||||| ||||| ||||||||  || |    
T  29763129 ctatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacacgtgtcgtgtgtaactacacttaattatgtgattttttcaaattataagtt 29763228  T
Q  139 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||| || || ||||||||  |||||||| ||||||||||    
T  29763229 gtgttggtgtgtcagtgtctatgtcgtgttcggtgtctgt 29763268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 29787384 - 29787447
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 162  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||| | | |||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccgtgt 29787447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 33994276 - 33994173
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||| ||||| |||||| |||||| ||||||||||||| |  || |||||||| ||| || |||||||| ||||||| |||||||||||  ||||| ||    
T  33994276 gtgtctgacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgttcgtgtcgtgtcaagtgtccgt 33994177  T
Q  179 atcc 182  Q
    ||||    
T  33994176 atcc 33994173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 5236030 - 5235928
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    |||||||||| |||||| | ||||||| |||||| |||| |||||| ||| |||||||| |||||||||||  |||| ||||   ||||| |||||||||    
T  5236030 taattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgtccgtatttgtatctgtgcttcata 5235931  T
Q  199 gga 201  Q
    |||    
T  5235930 gga 5235928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 5835291 - 5835233
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||||||||||||||||| ||||||||||| || |||  |||||||||||||||||||    
T  5835291 taattacactgaattatgttattttctcaaactattagtggtgtcggcgtatcagtgtc 5835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 9778559 - 9778452
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||||| ||||||| |||||||||||| ||||| ||||||||  |||||||        |||||||||||||||||||||||||| || |||     
T  9778559 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtg--------tcagtgtccgtgtcgtgtccggtgtccgtgtccg 9778468  T
Q  184 tatctatgcttcatag 199  Q
    ||||  ||||||||||    
T  9778467 tatccgtgcttcatag 9778452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 21828421 - 21828483
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 162  Q
    ||||||| || ||||||| ||||||||||||||||| | |||||||||| |||||||||||||    
T  21828421 aattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 21864872 - 21864767
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttct--caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtct 176  Q
    ||||||||||  |||||| ||||||||||| |||||| | ||||| |  ||||||| |||||||||| | || || |||||||||||||||||| ||| |    
T  21864872 gtgtccgacagcgacacttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgtgt 21864773  T
Q  177 gtatcc 182  Q
    ||||||    
T  21864772 gtatcc 21864767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 1433498 - 1433397
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    |||||||||  ||| |||| |||||||||||||| || | |||||||||| ||| |||||||||||||| ||||||| ||  || ||||  |||||||||    
T  1433498 taattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtcgtgttcggtgtccgtgcccgtatccgtgcttcata 1433399  T
Q  199 gg 200  Q
    ||    
T  1433398 gg 1433397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 19206094 - 19206025
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||| | |||||||||| |||||||||||||| |||| |||||||||| |  ||||||||||||||||    
T  19206094 taattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtcgtgtc 19206025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 19213912 - 19213803
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcg---tgttccggt---gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattac 133  Q
    |||||||||||||||||| |||||||||||||   ||| |||||   ||||||||| |||||| ||| |||||||| ||||||| ||||| | ||||||     
T  19213912 ctatgaagcacggacactcctcggattaggcggcgtgtcccggtcgtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattat 19213813  T
Q  134 tagctgtgtc 143  Q
    |||| |||||    
T  19213812 tagcagtgtc 19213803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 20549855 - 20549778
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 156  Q
    ||||||||||| |||||   |||||||||||||||| || |||||||||||||| |||| ||||||| || |||||||    
T  20549855 gtgtccgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 105 - 181
Target Start/End: Original strand, 2425754 - 2425830
Alignment:
Q  105 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    |||| |||||||| |||||||||||||| || | ||| |||||| ||||| || ||||||||||| |||||||||||    
T  2425754 cacttaattatgtgattttctcaaattattaacggtgccggcgtgtcagtatctgtgtcgtgtccagtgtctgtatc 2425830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 5409770 - 5409814
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||| |||||||||||||||| ||||||||    
T  5409770 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtc 5409814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 15680873 - 15680789
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| ||||||  |||||||||| |||||||| ||||| |  ||||| ||||| ||||||||| ||||||||| ||||    
T  15680873 gtgtccgacaccgacacttataattacactaaattatgtgattttttttaattattagctatgtcggcgtgtcagtgtccatgtc 15680789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 21880271 - 21880223
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    ||||||||||||||||||||||||||||||||||| | |||||| ||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggaca 21880223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 26329397 - 26329473
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||| |||  ||||||||||||| || |  ||||||||| |||||||| ||||||||||| |||||    
T  26329397 taattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtcgtgtccagtgtc 26329473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 95
Target Start/End: Complemental strand, 6490835 - 6490780
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac 95  Q
    |||||||||||||||||| ||||||||| |||||| |||||||| ||||| |||||    
T  6490835 ctatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacaccgacac 6490780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 162
Target Start/End: Original strand, 7197292 - 7197375
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 162  Q
    ||||||||||| |||||| ||||||||| |||||||  | ||||| | |||||| ||||||||||||||| ||| |||| ||||    
T  7197292 gtgtccgacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtcaatgtctgtgt 7197375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 7328706 - 7328789
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||||||| |||||||| |||||||||||||| |||| || ||| ||| | | |||| ||||||||| ||||||| ||||||    
T  7328706 taattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtcgtgttcggtgtccgtatcc 7328789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 19992060 - 19992001
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    |||||| ||||||  ||||||||||||| ||||| |||||||||||||| ||||||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 23930261 - 23930218
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    ||||||||||||||||||||||||||||||||||| | ||||||    
T  23930261 attacactgaattatgtcattttctcaaattactatccgtgtcg 23930218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 3991432 - 3991322
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    ||||||||| |||||||| |||||||||||||||| || ||        |||||| |||||| ||||||| |||||||||||| ||||| |||||||| |    
T  3991432 ctatgaagcccggacactcctcggattaggcgtgtcccagtcgatacgacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatt 3991333  T
Q  135 agctgtgtcgg 145  Q
    || ||||||||    
T  3991332 agttgtgtcgg 3991322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 8234210 - 8234144
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||| | |||| |||| ||||||||||||||| ||||| |||||||| ||| ||||||||    
T  8234210 gtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtcgg 8234144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 103 - 169
Target Start/End: Original strand, 8842354 - 8842420
Alignment:
Q  103 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    ||||| |||| |||| |||||||||||||  |||| ||||||| |||| ||||||||||||||||||    
T  8842354 tacacagaatcatgtgattttctcaaattcttagcagtgtcggtgtattagtgtccgtgtcgtgtcc 8842420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 9778625 - 9778575
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||| || ||||||||||||| |||||||| |||||    
T  9778625 cctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacac 9778575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 29812598 - 29812632
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||||||||||||||||||||    
T  29812598 ctatgaagcacggacacttctcggattaggcgtgt 29812632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 9408334 - 9408407
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||  |||||||| || ||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtc 9408407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 165
Target Start/End: Complemental strand, 10042996 - 10042915
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgt 165  Q
    |||||||||||||  ||||||| || |||||||| | ||| |||||||| |||  |||||||||| | ||||||||||||||    
T  10042996 cgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtcgt 10042915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 22484069 - 22484004
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcg 164  Q
    |||||| |||||||||||  ||||||| |||||| |||| |||||||||| |||||||| ||||||    
T  22484069 taattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtcg 22484004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 32287404 - 32287453
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacact 90  Q
    ||||||||||||||||| ||||||||||| |||| |||||||| ||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacact 32287453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 43027404 - 43027453
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||  ||||||||||||||| |||||||| |||||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacac 43027453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 7133295 - 7133339
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||||||||||||||||||||||||  | |||||||||    
T  7133295 attacactgaattatgtcattttctcaaattatcatctgtgtcgg 7133339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 132
Target Start/End: Original strand, 10230024 - 10230121
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac----tc-gtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||||| ||| || |||| |||||||||| ||||||||||||  ||||    ||  || ||||||||||||||||||||| |||||||||    
T  10230024 ctatgaagcacggaaactccttggatcaggcgtgttctggtgtccgacaccaacacgacatctatacttacactgaattatgtcatttcctcaaatta 10230121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 17851475 - 17851399
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||| ||||||| |||||| |||| || |||  || || || ||| ||||||||||||||||    
T  17851475 taattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtcggtatccatgtcgtgtccggtgtc 17851399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 22602725 - 22602793
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||||||||||||||| |||||||||||| | |  | |||||||||| |||||| | |||||||||    
T  22602725 taattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtcagtgcctgtgtcgtgt 22602793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 26033468 - 26033516
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||| |||||||||||||||||||| ||||| |||||||| ||||||    
T  26033468 gacacttgtaattacactgaattatgtgattttttcaaattattagctg 26033516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 178
Target Start/End: Complemental strand, 12278899 - 12278794
Alignment:
Q  78 ggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc------tgtgtcggcgtatcagtgtccgtgtcgtgtccgg 171  Q
    |||||||||||| |||||   ||||||||||||||||||||||||||| |||||| || |       |||| ||| | |||||||||||||||||||||     
T  12278899 ggtgtccgacac-gacacatataattacactgaattatgtcattttcttaaattattatcagtgttggtgttggcttgtcagtgtccgtgtcgtgtccga 12278801  T
Q  172 tgtctgt 178  Q
    |||||||    
T  12278800 tgtctgt 12278794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 93 - 175
Target Start/End: Original strand, 13557750 - 13557835
Alignment:
Q  93 cactcgtaattacactgaattatgtcattttctc---aaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||| |||||||||||||||||||| ||||| |    |||||| ||| | ||||||||| |||||||| ||||| |||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtgtctgtgtcatgtccggtgtc 13557835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 15902866 - 15902795
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||||||| |||||||| ||||| |||||||| ||   |||||||| | |||||||| ||||||||||||    
T  15902866 taattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 24339772 - 24339729
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||| |||| |||||||||||||||| ||||||||    
T  24339772 ctatgaagcacgggcactcctcggattaggcgtgtcccggtgtc 24339729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 36297369 - 36297435
Alignment:
Q  108 tgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||| ||||||| |||||| |||| ||||||  || ||| ||||||||||||||||||||||    
T  36297369 tgaattatgtgattttcttaaattattagccgtgtcga-gtgtcaatgtccgtgtcgtgtccggtgtc 36297435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Complemental strand, 1401069 - 1401007
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 161  Q
    ||||||||||||||||||| | |||||||||||| ||||  | || |||| ||||||||||||    
T  1401069 taattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtccgtg 1401007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 2424658 - 2424620
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagc 137  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  2424658 taattacactgaattatgtgattttctcaaattattagc 2424620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 5548735 - 5548673
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggc 146  Q
    ||||||||||||   ||||||||||||||||| | ||||||||||||||  ||| ||||||||    
T  5548735 cgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggc 5548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 129
Target Start/End: Original strand, 5937420 - 5937466
Alignment:
Q  83 ccgacactgacactcgtaattacactgaattatgtcattttctcaaa 129  Q
    ||||||| |||||| || |||||| ||||||||||||||||||||||    
T  5937420 ccgacacagacacttgtgattacattgaattatgtcattttctcaaa 5937466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 6630927 - 6630985
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||||||||||||| || | |||||||||||| |||  |||||||||| ||||||||    
T  6630927 taattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 155
Target Start/End: Original strand, 11272586 - 11272659
Alignment:
Q  84 cgacactgacactcgtaattacactgaat--tatgtcattttctcaaattactagctgtgtcggcgtatcagtg 155  Q
    |||||| |||||| |||||||||||||||  ||||| ||||| ||||||||  || ||||||||||| ||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgtctcagtg 11272659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 12289158 - 12289088
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgt-gtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||| ||||||||||||| |||||||||||||| |||| || | |||||| || |||||||||| |||||    
T  12289158 taattccactgaattatgtgattttctcaaattattagcagtggccggcgtgtcggtgtccgtgttgtgtc 12289088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 83
Target Start/End: Complemental strand, 13770810 - 13770772
Alignment:
Q  45 aagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||  ||||||||||||||||||||||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtc 13770772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 197
Target Start/End: Original strand, 21140997 - 21141095
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcat 197  Q
    |||| |||||||||||| | ||||||| |||||| |||  |||||| ||| || | ||||||||||||| ||||||| || ||| ||||  ||||||||    
T  21140997 taatcacactgaattatatgattttcttaaattattagtggtgtcgacgtgtcggcgtccgtgtcgtgtacggtgtccgtgtccgtatccgtgcttcat 21141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 49107864 - 49107795
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    |||| ||||| ||||||||  ||||||||||||| |||| ||||||| || |||| |||||||||||||||    
T  49107864 taatcacactcaattatgtg-ttttctcaaattattagcggtgtcggtgtgtcagagtccgtgtcgtgtcc 49107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 1433578 - 1433529
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| |||||||||| ||||| | |||||| |||||    
T  1433578 ctatgaagcacggacactcctcggattagacgtgtcctggtgtcggacac 1433529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 4909215 - 4909162
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||||||||   | |||||| |||||||||| ||||||||||||||    
T  4909215 gtgtccgacactgacacatatgattacaatgaattatgtaattttctcaaatta 4909162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 17307937 - 17307904
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||||| ||||||||||||||    
T  17307937 taattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 18013074 - 18013155
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgt 165  Q
    ||||||||||||   ||||||||||||||||||| ||||| | |||||| |||  ||||| |  | ||||||||||||||||    
T  18013074 cgacactgacacatataattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtgtccgtgtcgt 18013155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 78
Target Start/End: Original strand, 18035806 - 18035843
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccg 78  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  18035806 tatgaagcacggacactcctcggattagacgtgttccg 18035843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 124
Target Start/End: Complemental strand, 25956509 - 25956464
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttc 124  Q
    ||||||||||| |||||| || |||||| |||||||||||||||||    
T  25956509 gtgtccgacaccgacacttgtgattacattgaattatgtcattttc 25956464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 135
Target Start/End: Complemental strand, 37776039 - 37775990
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaattacta 135  Q
    ||||||||||  || |||||| | ||||||||||||||||||||||||||    
T  37776039 acactgacacatgtgattacatttaattatgtcattttctcaaattacta 37775990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 598272 - 598176
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||| ||||| ||||||   ||||||| | ||||| || ||||||| |||||| |||| ||||||  || |||||||||||||| |||| ||||||    
T  598272 gtgtctgacaccgacacttacaattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtctggtgtc 598176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 43 - 83
Target Start/End: Original strand, 8842282 - 8842322
Alignment:
Q  43 tgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||| || ||||||||||||| ||||||||    
T  8842282 tgaagcacggacactccttggattaggcgtgtcccggtgtc 8842322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 132
Target Start/End: Original strand, 12843175 - 12843223
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||  ||||||||| |||||||||| ||||| ||||||||    
T  12843175 cgacactgacacatgtaattacattgaattatgtaattttatcaaatta 12843223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 148
Target Start/End: Complemental strand, 24289859 - 24289815
Alignment:
Q  104 acactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||||||||||| |||||||||||||| | || ||||||||||    
T  24289859 acactgaattatgtaattttctcaaattattggcggtgtcggcgt 24289815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 25822714 - 25822650
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||| |||||| |||||||||||||||| ||   |||| |||||||| ||| |||||||||||    
T  25822714 cgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgt 25822650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 40287306 - 40287350
Alignment:
Q  44 gaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||| |||||||||||| ||| |||||||| ||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggaca 40287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 1e-29; HSPs: 106)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 79 - 181
Target Start/End: Complemental strand, 55401139 - 55401037
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||| ||    
T  55401139 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccgtgtcgtatccggtgtccgt 55401040  T
Q  179 atc 181  Q
    |||    
T  55401039 atc 55401037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 8587017 - 8587118
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 179  Q
    |||||||||| |||||| ||||||||||| |||||||| ||||| |||||||||||| ||||||||||| |||||||||||||| ||||||||||| |||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccggtgtccgta 8587116  T
Q  180 tc 181  Q
    ||    
T  8587117 tc 8587118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 10268468 - 10268567
Alignment:
Q  66 taggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgt 165  Q
    |||||||||||||||||| |||||||||||| ||||||||||| |||||||| ||||| |||||||| || |||||||||||| ||||||||| ||||||    
T  10268468 taggcgtgttccggtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtcgt 10268567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 24205037 - 24205132
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| ||||||  ||||||||||| |||||||||||||||||||||| || | |||||||||| ||||||||||||||||||||||||||    
T  24205037 gtgtccgacac-gacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 24205132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 28918060 - 28917969
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||||| ||||| ||||||||||||||||||||    
T  28918060 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccggtgtc 28917969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 200
Target Start/End: Complemental strand, 7171565 - 7171445
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||||||||  ||||| |||||||||| ||||||| | ||||| ||||||||| |||||||||||| | ||||| |||||||||||||||||||||||    
T  7171565 gtgtccgacaccaacacttgtaattacaccgaattatatgatttt-tcaaattacaagctgtgtcggcatgtcagtatccgtgtcgtgtccggtgtctgt 7171467  T
Q  179 atccttatctatgcttcatagg 200  Q
     ||| ||||  |||||||||||    
T  7171466 gtccgtatccgtgcttcatagg 7171445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 8383321 - 8383225
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| ||||||  ||||||||||||||||| | |||||||||||||| |||| |||||||||| ||| |||||||||||||||| |||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtccagtgtc 8383225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 15796294 - 15796409
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||| | |||||||||||||||||| | ||||| |||||||| || |||||||||||| ||| |||||||||||||||||||||| || |||     
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtgtcca 15796393  T
Q  184 tatctatgcttcatag 199  Q
    ||||  ||||||||||    
T  15796394 tatccgtgcttcatag 15796409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 198
Target Start/End: Original strand, 16000011 - 16000130
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| ||| |||||||||||||||| ||||| | |||||| ||| ||||||||||| |||||||| ||||||||| ||||||| ||    
T  16000011 gtgtccgacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccgt 16000110  T
Q  179 atccttatctatgcttcata 198  Q
     ||| ||||  |||||||||    
T  16000111 gtccgtatccgtgcttcata 16000130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 35994734 - 35994853
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||| | ||| ||||| ||||||||||||||||  |    
T  35994734 gtgtccgacac-gacacttgtaattacactgaattatgtgatttt-tcaaattattagctgtgtcggcttgtcattgtccatgtcgtgtccggtgtccat 35994831  T
Q  179 atccttatctatgcttcatagg 200  Q
     ||| ||||  |||||||||||    
T  35994832 gtccgtatccgtgcttcatagg 35994853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 26492200 - 26492291
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||| || ||| |||||||||||||||| | | ||||| |||||||| ||||| ||||||||| |||||||||||||||||||||    
T  26492200 gtgtccgacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 175
Target Start/End: Original strand, 10335244 - 10335377
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    |||| |||||||| ||||| |||  |||||||||||    ||| ||||||| |||||| ||| ||||||| || ||||| | ||| |||||||| ||| |    
T  10335244 cctacgaagcacgaacactcctccaattaggcgtgtc---gtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagtt 10335340  T
Q  139 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10335341 gtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 10335377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 83 - 200
Target Start/End: Complemental strand, 21479178 - 21479067
Alignment:
Q  83 ccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||| |||||| |||||||||||||||| ||| ||||| |||||||| |||||||||||||      ||||| ||||||||||||||||| || |||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggc------gtgtcagtgtcgtgtccggtgtccgtgtcc 21479085  T
Q  183 ttatctatgcttcatagg 200  Q
     |||| ||||||||||||    
T  21479084 gtatccatgcttcatagg 21479067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 91 - 175
Target Start/End: Original strand, 4990974 - 4991058
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||||||||||||||||| ||||||||||| || |||| ||||||| || ||||| |||||||||||| |||||||    
T  4990974 gacacttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtcgtgttcggtgtc 4991058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 10955016 - 10954932
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| |||||| || ||||||||||||||||| ||||| |||||||| ||| ||||||||||| ||||||| ||||||    
T  10955016 gtgtccgacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgttcgtgtc 10954932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 11610628 - 11610496
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac----tgacactcgtaattacactgaattatgtcattttctcaaattacta 135  Q
    |||||||||||||||||| ||| |||||||||||| ||| |||| |||||    ||||||| |||| ||||||||||||||| ||||| | |||||| ||    
T  11610628 ctatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacacgacttgacacttgtaactacactgaattatgtgatttttttaaattatta 11610529  T
Q  136 gctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    || |||| ||||| ||||| || |||| |||||    
T  11610528 gcggtgttggcgtgtcagtatctgtgttgtgtc 11610496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 14829748 - 14829658
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||| ||||||||  |||||||||| ||||| |||||||| ||||||||||||||| |||||||| ||||| |||||||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtc 14829658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 25093566 - 25093467
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||   ||||||||||||||| ||| |||||||||||| | || | |||||||||| | |||||| ||||||||||||||||||||    
T  25093566 gtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtcgtgtccggtgtctgt 25093467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 157
Target Start/End: Complemental strand, 20503529 - 20503451
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||| |||| |||||| |||||||||||||||||||||||||| |||||||| | | ||||||||||| ||||||||    
T  20503529 gtgtccaacaccgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 3164043 - 3164116
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||||||| ||||| |||||||| ||||||||||| |||  || ||||||||||||||||||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccggtgtc 3164116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 156
Target Start/End: Original strand, 4987299 - 4987363
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 156  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| |||||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 25064953 - 25064873
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 179  Q
    |||||||||| |||||||| ||||| |||||| | |||| |||||||||| ||| |||| |||||||||||||||||||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccggtgtctgta 25064873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 174
Target Start/End: Complemental strand, 3610685 - 3610602
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    |||||| ||||||||||||| |||||| ||||| | |||||| || |||||| ||||| |||||||| ||||||||||||||||    
T  3610685 gacactggtaattacactgagttatgttatttttttaaattattaactgtgttggcgtgtcagtgtctgtgtcgtgtccggtgt 3610602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Complemental strand, 26508162 - 26508083
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| |||||||||||||||||||| ||||| |||||||| |||||||||| |||| ||||| || || |||||||||    
T  26508162 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 41961650 - 41961741
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||| |||||||||| |||| |||| || || |||||||| ||| |||| |||||| |||||||| |||||||||||||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtctgtgtcgtgtccggtgtc 41961741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 170
Target Start/End: Complemental strand, 14979224 - 14979154
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||||||||||||||| ||||| |||||||| |||||||||||||||  || ||||| |||||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgccattgtccttgtcgtgtccg 14979154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 157
Target Start/End: Complemental strand, 40052432 - 40052318
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac--tgacactcgtaattacactgaattatgtcattttctcaaattactag 136  Q
    ||||||||||||| ||||| |||||||||||||||| |||||||| |||||   |||||| || |      |||||||||| ||||| |||||||| |||    
T  40052432 cctatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacacgtcgacacttgtga------tgaattatgtgattttttcaaattattag 40052339  T
Q  137 ctgtgtcggcgtatcagtgtc 157  Q
    |||||||||||| ||||||||    
T  40052338 ctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 750618 - 750735
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatca-gtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||| |||||| |||||| ||  ||||||||| || || |||||||| ||| ||||||| ||| ||| ||||||||||||||||||||||| || |||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtcaagtgtccgtgtcgtgtccggtgtccgtgtcc 750717  T
Q  183 ttatctatgcttcatagg 200  Q
     ||||  |||||||||||    
T  750718 gtatccgtgcttcatagg 750735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 9800083 - 9800014
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    |||||||| ||||||||| |||||||||||||| |||  |||||||||| ||||||| ||||||||||||    
T  9800083 aattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 16789668 - 16789741
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||||||||||||||| || |||||||||| | || || |||||||| | |||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattatctgtgtcggcatctcggtatccgtgtcatctccggtgtc 16789741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 14209172 - 14209108
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||||| |||||||||||||||||||| ||||| | |||||| ||| |||||||||||    
T  14209172 cgacactgacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgt 14209108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 14216951 - 14216867
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||| |||||| |||||||||||||||||| | || || | |||||| ||| ||||||| ||| |||||||||||||||||||    
T  14216951 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14216867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 14223080 - 14222996
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||| |||||| |||||||||||||||||| | || || | |||||| ||| ||||||| ||| |||||||||||||||||||    
T  14223080 cgacacggacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtccgtgtcgtgtc 14222996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 34307795 - 34307895
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||| |||| |  ||||| ||||| ||||||||||  || ||| |||| ||||||||||    
T  34307795 taattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttcgtgtccgtatccatgcttcata 34307894  T
Q  199 g 199  Q
    |    
T  34307895 g 34307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 143
Target Start/End: Original strand, 51206348 - 51206412
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||| |||||| ||| |||||||||||||||| ||||| |||||||| ||||||||||    
T  51206348 gtgtccgacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtc 51206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 25652050 - 25652121
Alignment:
Q  103 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    ||||||||||||| |||||||||||||||| || | |||| ||||| | ||||||||||||||||| |||||    
T  25652050 tacactgaattatatcattttctcaaattattatccgtgttggcgtgttagtgtccgtgtcgtgtctggtgt 25652121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 41961578 - 41961628
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||||||||||||||||||||| || ||||| |||||    
T  41961578 cctatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacac 41961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 178
Target Start/End: Original strand, 12674466 - 12674595
Alignment:
Q  50 cggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatg---tcattttctcaaattactagctgtgtcggc 146  Q
    |||||||| ||||||| |||||||| |  || |||||||| |||||  | ||||||||||||||||    | |||||||||||||| |||| |||||||     
T  12674466 cggacactcctcggat-aggcgtgtccatgtatccgacac-gacacatgcaattacactgaattattatttgattttctcaaattattagcagtgtcggt 12674563  T
Q  147 gtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    || ||| ||||||||||||||| |||||||||    
T  12674564 gtgtcaatgtccgtgtcgtgtctggtgtctgt 12674595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 199
Target Start/End: Complemental strand, 14747621 - 14747511
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||| ||| || ||||||||||| |||||||| ||||| | ||||||| |||||||||||||      ||||| ||||||||||||||||| ||||||    
T  14747621 cgacacggacccttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggc------gtgtcagtgtcgtgtccggtgtccgtatcc 14747528  T
Q  183 ttatctatgcttcatag 199  Q
     ||||  ||||||||||    
T  14747527 gtatccgtgcttcatag 14747511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 14832158 - 14832081
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 161  Q
    ||||||||||||| ||||||||| ||| |||||| ||||| |||||||| ||||||| ||||||| || || ||||||    
T  14832158 cgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtccgtatccgtg 14832081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 34185052 - 34185101
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  34185052 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 34185101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 49505149 - 49505230
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    |||||||||||||||||   |||||||||| |||||||| |||||||||||||| |||| || || |||| || ||||||||    
T  49505149 gtgtccgacactgacacatataattacactaaattatgtgattttctcaaattattagcggtctctgcgtgtcggtgtccgt 49505230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 2620071 - 2620139
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||| |||||||| |||||||||||| | |||  |||||||||| |||||||||| ||||||||||    
T  2620071 ttacacttaattatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccgagtcgtgtccg 2620139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 5441046 - 5441118
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccgg 171  Q
    ||||| || |||||||||| |||||||||||||  |||| ||| |||||| |||||||| |||||||||||||    
T  5441046 taattccattgaattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccgg 5441118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 11665988 - 11665888
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    |||||||||| |||| ||| ||||| |||||||| ||||  |||||| || | |||||  |||||||||||||||||||||||| |||   |||||||||    
T  11665988 taattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccggtgtctgtatccatattcgtgcttcata 11665889  T
Q  199 g 199  Q
    |    
T  11665888 g 11665888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 158
Target Start/End: Complemental strand, 25775573 - 25775493
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcatt-ttctcaaattactagctgtgtcggcgtatcagtgtcc 158  Q
    ||||||||||| |||||| |||||||||||||||||||| ||| || |||||||| ||  ||||| ||||| |||||||||    
T  25775573 gtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtcc 25775493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 25948902 - 25948966
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||||||||||| ||||| |||||||| |||| || ||||| | ||||||||||||||    
T  25948902 taattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 34910376 - 34910312
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||| ||| || |||||||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgt 34910312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 49651715 - 49651759
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||    
T  49651715 cctatgaagcacggacacttctcggattaggtgtgtcccggtgtc 49651759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 143
Target Start/End: Complemental strand, 1509598 - 1509539
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    |||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 1509539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 4466619 - 4466698
Alignment:
Q  103 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||| | ||||||| |||||| || | ||||||| || ||||||| |||||| ||||||||||| ||||||    
T  4466619 tacactgaattatatgattttcttaaattattaccggtgtcggagtgtcagtgttcgtgtcatgtccggtgtccgtatcc 4466698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 8789489 - 8789536
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgaca 8789536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 14223872 - 14223939
Alignment:
Q  103 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| |||||| || ||||||||||||| || |||||||||||| || ||||| ||||||||||||    
T  14223872 tacactaaattatatcgttttctcaaattattatctgtgtcggcgtgtcggtgtctgtgtcgtgtccg 14223939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 20503584 - 20503541
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||||||| |||||||||||||||| ||||||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtc 20503541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 163
Target Start/End: Complemental strand, 21720807 - 21720744
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||||||||||||||  || ||||||||||| || | |||||||||| ||||||||||||||    
T  21720807 aattacactgaattatgagatattctcaaattattatcggtgtcggcgtgtcagtgtccgtgtc 21720744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 7928514 - 7928448
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||| |||||   ||||||||||||||||||| ||||| |||||||| |||| |||||||    
T  7928514 gtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 14618823 - 14618749
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||||||||  |||||| |||||| |||  ||||| |||| |||||| |||||||||||| ||||||    
T  14618823 attacactgaattatgtggttttcttaaattattaggggtgtcagcgtctcagtgcccgtgtcgtgtctggtgtc 14618749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 27903758 - 27903708
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| |||||    
T  27903758 cctatgaagcacggacacttctcggattaggcatgatccagtgtcagacac 27903708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 159
Target Start/End: Original strand, 32400703 - 32400780
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 159  Q
    ||||||||||| |||||| |||||||||   |||||||| || || |||||||| ||||||||||| ||| ||||||||||    
T  32400703 gtgtccgacacggacacttgtaattaca---aattatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccg 32400780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 33359823 - 33359741
Alignment:
Q  81 gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||||||||||||| ||| ||||||| || ||||| |  || |||||||| |||||||||| |||| |||||||| |||||    
T  33359823 gtccgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtgtctgtgtc 33359741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 169
Target Start/End: Complemental strand, 35312106 - 35312028
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    |||||| |||||||||||||||||||| |  || | |||||| ||  ||||||| | ||||||||||||||||||||||    
T  35312106 gacacttgtaattacactgaattatgtaacatttttaaattattaaatgtgtcgacatatcagtgtccgtgtcgtgtcc 35312028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 11493376 - 11493441
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcg 164  Q
    ||||||||||||||||||| ||||||||| |||| |||  |||||| ||| ||| |||||||||||    
T  11493376 taattacactgaattatgtgattttctcacattattagtggtgtcgacgtgtcaatgtccgtgtcg 11493441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 52 - 125
Target Start/End: Complemental strand, 13414560 - 13414487
Alignment:
Q  52 gacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttct 125  Q
    |||||||||||||| |||||||| || ||||||||||| |||||   |||||||| |||||||| | |||||||    
T  13414560 gacacttctcggataaggcgtgtccctgtgtccgacaccgacacatataattacattgaattatttgattttct 13414487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 21367382 - 21367289
Alignment:
Q  43 tgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac-----tcgtaattacactgaattatgtcattttctcaaatt 131  Q
    |||||||| |||||||||||||||||| |||| |  ||||||||||| |||||      | | |||||||| ||||||||||||||||||||||    
T  21367382 tgaagcacagacacttctcggattaggtgtgtccaagtgtccgacaccgacacaacaaccatgattacactaaattatgtcattttctcaaatt 21367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 27505370 - 27505321
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| |||||||||||| ||| |||||||| |||||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacac 27505321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 32429395 - 32429476
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 180  Q
    ||||| ||||||||||||| ||||||| |||||| ||||  |||||| || ||| ||| ||||| |||||||||||| ||||    
T  32429395 taattgcactgaattatgtgattttcttaaattattagcgttgtcggagtgtcaatgttcgtgttgtgtccggtgtccgtat 32429476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 34185123 - 34185196
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||| |||||| |||||||||||||||| ||| ||||| | |||||| |||| |||||||||| ||| ||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtcactgtc 34185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 40993274 - 40993323
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||| ||||    
T  40993274 cctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggaca 40993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 143
Target Start/End: Complemental strand, 8593200 - 8593136
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtc 143  Q
    |||||||||| |||||| ||||||| |||||||||||| ||||| | ||||||| ||||||||||    
T  8593200 tgtccgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtc 8593136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 14979269 - 14979225
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||| ||||| |||||||||| ||||||||    
T  14979269 cctatgaagcacggacactcctcgggttaggcgtgtcccggtgtc 14979225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 21256993 - 21257045
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    |||||| ||||||| |||||||||||| ||||| |||||||| ||||||||||    
T  21256993 gacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 24633823 - 24633736
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    ||||||||| || ||||| ||| ||||||||| |||||||||||||| |||  |||||||| | ||| |||||||||| |||| |||||    
T  24633823 acactgacaatcataattgcaccgaattatgtgattttctcaaattattagtggtgtcggcatgtca-tgtccgtgtcatgtctggtgt 24633736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 28812574 - 28812510
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||| |||||| |||| ||||||||||||||| ||||  |||||||| ||| |||||||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgt 28812510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 32804555 - 32804630
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||| |||||||| |||||||||||||| || | |||||||| | ||| || |||||||||| ||||||||    
T  32804555 taattacactaaattatgtgattttctcaaattattaacggtgtcggcatgtcaatgcccgtgtcgtg-ccggtgtc 32804630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 163
Target Start/End: Original strand, 3865592 - 3865635
Alignment:
Q  120 ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||| |||||||| ||||||||||||||| ||||||||||||||    
T  3865592 ttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 3865635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 4987222 - 4987269
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||| ||||||||| |||||||||||||||| |||||||| |||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacac 4987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 12084002 - 12083918
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaa 128  Q
    ||||||||||| |||||| ||| ||||||||  || | ||||||    ||||||||| ||||||||||||||||||||  |||||||||    
T  12084002 ctatgaagcacagacactcctcagattaggcacgtccaggtgtc----actgacacttgtaattacactgaattatgtagttttctcaa 12083918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 16789056 - 16788973
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||||||| | ||||| | |||||| || || | |||| |||||||| |||||||| | || |||||||||||||    
T  16789056 taattacactgaattatatgatttttttaaattattaactatatcggtgtatcagtatccgtgtcatatctggtgtctgtatcc 16788973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 20691361 - 20691330
Alignment:
Q  101 attacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  20691361 attacactgaattatgtcattttctcaaatta 20691330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 132
Target Start/End: Complemental strand, 21149109 - 21149078
Alignment:
Q  101 attacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||||||||||||||||||    
T  21149109 attacactgaattatgtcattttctcaaatta 21149078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 25074831 - 25074784
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||||| ||||||||||||||||||||||| || | ||||||||||    
T  25074831 attacactcaattatgtcattttctcaaattattatcggtgtcggcgt 25074784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 101 - 144
Target Start/End: Complemental strand, 34189469 - 34189426
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    ||||||||||| |||||||||||||||||||| || ||||||||    
T  34189469 attacactgaaatatgtcattttctcaaattattatctgtgtcg 34189426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 4990912 - 4990946
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  4990912 ctatgaagcacggacactcctcggattaggcgtgt 4990946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 5407262 - 5407324
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 161  Q
    |||||||| |||||||||| |||||||||||||  |||| |||||||||| || || ||||||    
T  5407262 taattacaatgaattatgtgattttctcaaatttttagcggtgtcggcgtgtcggtatccgtg 5407324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 8789545 - 8789611
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||| |||||   ||||||||| ||||||||| ||||||||||||||  ||| |||||||    
T  8789545 gtgtccgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcgg 8789611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 8842448 - 8842414
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  8842448 ctatgaagcacggacactcctcggattaggcgtgt 8842414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 163
Target Start/End: Original strand, 10318075 - 10318113
Alignment:
Q  125 tcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||||| ||||||||||||||| ||||||||||||||    
T  10318075 tcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 10318113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 11252022 - 11251984
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagc 137  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  11252022 taattacactgaattatgtgattttctcaaattattagc 11251984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 11252095 - 11252057
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccg 78  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccg 11252057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 11313815 - 11313861
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagcagtgtcgg 11313861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 14217021 - 14216979
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtc 14216979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 14223150 - 14223108
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||||||||||||| |||| || |||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtc 14223108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Original strand, 14840306 - 14840376
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    ||||||||||||||||||| ||||||| |||||| ||   |||| ||||| || || ||||||||||||||    
T  14840306 taattacactgaattatgtgattttctgaaattattaatggtgttggcgtgtcggtatccgtgtcgtgtcc 14840376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 16192765 - 16192811
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||||||||||| |||||||||||||| || | |||||||    
T  16192765 taattacactgaattatgttattttctcaaattattaacggtgtcgg 16192811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 146
Target Start/End: Complemental strand, 27505305 - 27505243
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggc 146  Q
    |||||| |||||| ||||||||||| |||||||| |||||   |||||| |||||||||||||    
T  27505305 cgacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcggc 27505243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 83
Target Start/End: Complemental strand, 34910435 - 34910393
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||    
T  34910435 tatgaagcacggacactcctcggattagacgtgtcccggtgtc 34910393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 55401194 - 55401160
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgt 55401160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 90
Target Start/End: Complemental strand, 1509681 - 1509636
Alignment:
Q  45 aagcacggacacttctcggattaggcgtgttccggtgtccgacact 90  Q
    ||||||||||||| ||| |||||||||||| |||||||| ||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggacact 1509636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Original strand, 8039850 - 8039899
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||||||||| | |||||||||||||| |||| |||| |||||    
T  8039850 taattacactgaattatataattttctcaaattattagcggtgttggcgt 8039899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 12704051 - 12704002
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||||||||||||||||  ||||||||||||| |||  ||||||||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgt 12704002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 69
Target Start/End: Complemental strand, 17276846 - 17276817
Alignment:
Q  40 ctatgaagcacggacacttctcggattagg 69  Q
    ||||||||||||||||||||||||||||||    
T  17276846 ctatgaagcacggacacttctcggattagg 17276817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Complemental strand, 29508567 - 29508526
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtc 29508526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 9624685 - 9624641
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    |||||||| |||||||||| |||||||||||||| |||| |||||    
T  9624685 taattacattgaattatgtgattttctcaaattattagcagtgtc 9624641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 10690277 - 10690321
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||||||||||| ||||||||| |||| |||| |||||    
T  10690277 taattacactgaattatgtgattttctcagattattagcggtgtc 10690321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 15999951 - 15999999
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||| ||||||||||| || ||||||||||||| |||||||| |||||    
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacac 15999999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Original strand, 27277853 - 27277897
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagcagtgtc 27277897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 40 - 200
Target Start/End: Complemental strand, 46776 - 46625
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||||||||||||||| ||||||||||||||||         |||||| |||| | |||||||||||||||||||| ||||| |||||||| || |||    
T  46776 ctatgaagcacggacactcctcggattaggcgtgt---------cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactg 46686  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatagg 200  Q
    ||||||||| ||| ||||||||||||||||| |||| || ||| ||||  |||||||||||    
T  46685 tgtcggcgtgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcatagg 46625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 457 - 575
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| |||||||||||||||| ||| ||||| |||||||| |||| ||||||||||||||||||||||| ||||| ||||||| ||    
T  457 gtgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccgtggcgtgttcggtgtccgt 556  T
Q  179 atccttatctatgcttcat 197  Q
     ||| ||||  ||||||||    
T  557 gtccgtatccgtgcttcat 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 91)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 172
Target Start/End: Complemental strand, 27213645 - 27213518
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||  |      |||||||| |||||||||| ||||||| |||||| ||||     
T  27213645 cctatgaagcacggacacttctcggattagccgtgtcccggtgtccgacacata------taattacagtgaattatgtgattttctgaaattattagca 27213552  T
Q  139 gtgtcggcgtatcagtgtccgtgtcgtgtccggt 172  Q
    |||||||||| || || |||||||||||||||||    
T  27213551 gtgtcggcgtgtctgtatccgtgtcgtgtccggt 27213518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 22652035 - 22651944
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||||| ||||||| | |||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 22651944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 29510306 - 29510395
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||| |||||| ||||||| |||||||| ||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 29510395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 24362217 - 24362317
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||||||||||| ||| |||||||||| |||| |||||||||| || ||||| ||||||| ||||||||| |||||| ||||| |||||||||    
T  24362217 taattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtcgtatccggtgtccgtatccgtatctgtgcttcata 24362316  T
Q  199 g 199  Q
    |    
T  24362317 g 24362317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 20873133 - 20873042
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| || || ||||||||| |||||||||||||||||||||    
T  20873133 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 40 - 170
Target Start/End: Complemental strand, 24669536 - 24669406
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||||||| |||| ||  ||||||||||| ||| | | ||| |||||| |||||| |||||||||||||||||||| |||| ||||||||| || | |    
T  24669536 ctatgaagcatggacgctcatcggattaggcatgtcctgatgttcgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacgg 24669437  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||| |||| |||||||| ||||||||||||    
T  24669436 tgtcagcgtgtcagtgtctgtgtcgtgtccg 24669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 199
Target Start/End: Original strand, 2572056 - 2572171
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||| ||||||| ||| || || |||||||||||||| ||||| || |||     
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtccagtgtccgtgtccg 2572155  T
Q  184 tatctatgcttcatag 199  Q
    |||| |||||||||||    
T  2572156 tatccatgcttcatag 2572171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 4673426 - 4673528
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcctt 184  Q
    |||||||| ||| |||||||||||||||| | | ||||| |||||||| || |||||||||||| |||||||| |||||||||||| |||| |||||| |    
T  4673426 gacactgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgtccgtatccgt 4673525  T
Q  185 atc 187  Q
    |||    
T  4673526 atc 4673528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 40 - 175
Target Start/End: Original strand, 13436910 - 13437055
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc----------cgacactgacactcgtaattacactgaattatgtcattttctcaaa 129  Q
    ||||||||||| |||||| || ||||||||||||| ||||||||          |||||| |||||| || |||||  |||||||||| ||||| |||||    
T  13436910 ctatgaagcacagacactccttggattaggcgtgtcccggtgtcgacaccgacacgacaccgacacttgttattaccatgaattatgtgattttttcaaa 13437009  T
Q  130 ttactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||| ||||||||||||||| ||||||||| |||| |||||||||||    
T  13437010 ttattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtc 13437055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 22197743 - 22197833
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||| ||||||||||| |||||||| | ||| |||||||| ||||||||| ||||| | |||||| |||||||||||||||||    
T  22197743 gacactgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccggtgtc 22197833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 25192362 - 25192443
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 180  Q
    |||||| |||||||||||||| ||| |||||||| ||||||||||||||| ||||||||||| ||||||||| |||| ||||    
T  25192362 taattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgtccgtat 25192443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 36450749 - 36450833
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||||||||  ||||| |||||||||||||||| ||| ||||| |||||||| ||| ||||||||||| ||||||||||||||    
T  36450749 gtgtccgacacctacacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 8343380 - 8343289
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||| |||||||| ||||| |||||| || || ||||| ||||||||||||    
T  8343380 gtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccg 8343289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 31557060 - 31556958
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||| ||||| || ||| |||||||||||||||||||| ||||| |||||||| || |||||||||||| |||||| || |||| ||||||||||| ||    
T  31557060 gtgtctgacaccgaaacttgtaattacactgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccggtgtccgt 31556962  T
Q  179 atcc 182  Q
    ||||    
T  31556961 atcc 31556958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 81 - 175
Target Start/End: Original strand, 926785 - 926879
Alignment:
Q  81 gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||| ||||||  |||||||||||||  |||  |||||||||||||| |||  |||| ||||| ||||||||||||||||||||||||||    
T  926785 gtccgacaccgacacttataattacactgaacaatgagattttctcaaattattaggagtgttggcgtgtcagtgtccgtgtcgtgtccggtgtc 926879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 18170478 - 18170570
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 172  Q
    |||||||||| |||| | ||||||||| |||||||||| ||||| |||||||  ||  ||||||||||| ||||||||||||||||| |||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggt 18170570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 18634046 - 18634138
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 172  Q
    |||||||||| |||| | ||||||||| |||||||||| ||||| |||||||  ||  ||||||||||| ||||||||||||||||| |||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccgtgtcgtgaccggt 18634138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 25566949 - 25566841
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtcc-----gacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    ||||||||||| |||||| |||||||||||||||| ||||   ||     ||||| |||||| |||||||||||||||||||| ||||| |||||||| |    
T  25566949 ctatgaagcacagacactcctcggattaggcgtgtcccggacaccaacacgacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 25566850  T
Q  135 agctgtgtc 143  Q
    |||||||||    
T  25566849 agctgtgtc 25566841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 44067560 - 44067484
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||||||||||||||||||| || | |||||||||| |||||||| |||| ||||| ||||||    
T  44067560 taattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtcggtgtggtgtctggtgtc 44067484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 22596056 - 22595981
Alignment:
Q  81 gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgt 156  Q
    |||||||||  ||||| |||||||||||||||||||| ||||| | |||||| ||||||||||||||| |||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 159
Target Start/End: Original strand, 30271291 - 30271366
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 159  Q
    |||||||| |||| |||||||||||| ||||||| ||||| |||||| | ||||||||||||||| ||||||||||    
T  30271291 cgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccg 30271366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 36934714 - 36934615
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    |||||||| |||||||||| ||||| || ||||| |||| |||||| ||| | ||||||||||||||||  ||||| ||||||| |||| ||||||||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtcgtgtttggtgtttgtatccgtatccatgcttcata 36934615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 24413554 - 24413675
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctc-aaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 177  Q
    ||||||||||||||||||  ||||||| |||||||||||  ||||||| |||||| || | ||||| |  | ||||||||||||||||||| |||||| |    
T  24413554 gtgtccgacactgacacttataattaccctgaattatgtatttttctcaaaattattaacggtgtcagtatgtcagtgtccgtgtcgtgtctggtgtccg 24413653  T
Q  178 tatccttatctatgcttcatag 199  Q
    | ||| ||||  ||||||||||    
T  24413654 tgtccgtatccgtgcttcatag 24413675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 132
Target Start/End: Complemental strand, 4948754 - 4948663
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||| |||||  |  ||||||||||||  || |||||||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  4948754 ctatgaagcacgtacactcattcgattaggcgtgtctcg-tgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 4948663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 15816129 - 15816205
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    |||||| ||||||  |||||||||| |||||||| ||||| |||||||| ||| ||||||||||| |||||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgt 15816205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 155
Target Start/End: Complemental strand, 24613584 - 24613509
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtg 155  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| |||||||||||| || ||||||    
T  24613584 gtgtccgacaccgacacttgtaattacacttaattatgtgatttt-tcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 15816058 - 15816101
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  15816058 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtc 15816101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 3025615 - 3025557
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 137  Q
    |||||||||||||||||   ||||||||||||||||||| |||||||||||||| ||||    
T  3025615 gtgtccgacactgacacctataattacactgaattatgtgattttctcaaattattagc 3025557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 11927101 - 11927183
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    ||||||||||||||||||| ||||| |||||||| || | |||||||||||| ||  ||||||||||||  |||||| |||||    
T  11927101 taattacactgaattatgtgattttatcaaattattaacagtgtcggcgtattagcatccgtgtcgtgtttggtgtccgtatc 11927183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 13844591 - 13844669
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||||||||| |||||   |||||||||| |||||||| |||||||||||||| |||| |||||||||| || |||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 4298887 - 4298972
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| |||||| ||||||||| | |||||||| ||||| |||||||| || |||||||||||| | ||| || ||||||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccg 4298972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 5813656 - 5813575
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||||||||| |||||| ||| ||||||| || ||||| | ||| |||||||| ||||||||||||||| || ||||||||    
T  5813656 gtgtccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccgt 5813575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 145
Target Start/End: Complemental strand, 8343089 - 8342970
Alignment:
Q  37 cccctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----------cgacactgacactcgtaattacactgaattatgtcattttct 125  Q
    |||||||||||||| ||||||  ||||||||||||||| ||||||||           |||||| |||||| ||||||||||| |||||||| ||||| |    
T  8343089 cccctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatgtacgacaccgacacttgtaattacactaaattatgtgatttttt 8342990  T
Q  126 caaattactagctgtgtcgg 145  Q
    ||||||| ||||| ||||||    
T  8342989 caaattattagctatgtcgg 8342970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 188
Target Start/End: Complemental strand, 26434244 - 26434135
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||| |||| ||||||  |||||| | |||||||||| ||||||||||| || |||   ||| |||||||| |||||| | ||||||||| |||||||    
T  26434244 gtgtccaacaccgacacttttaattatattgaattatgtgattttctcaaactattagtgatgtaggcgtatcggtgtccatatcgtgtccgatgtctgt 26434145  T
Q  179 atccttatct 188  Q
    |||| |||||    
T  26434144 atccatatct 26434135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 34897129 - 34897068
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||| ||| || ||||||||    
T  34897129 taattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgt 34897068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 40332255 - 40332202
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||||||||||||    
T  40332255 gtgtcccacaccgacacttgtaattacactgaattatgtgattttctcaaatta 40332202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 151
Target Start/End: Complemental strand, 7658507 - 7658455
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatc 151  Q
    ||||||||||||||||||| |||||||||||||| |||  |||||||||||||    
T  7658507 taattacactgaattatgtaattttctcaaattattagtggtgtcggcgtatc 7658455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 11803303 - 11803235
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||||||||||||||| ||||||| |||||| || | ||||| | |||||||||| ||||||||||    
T  11803303 taattacactgaattatgtgattttcttaaattattaacagtgtcagtgtatcagtgttcgtgtcgtgt 11803235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 158
Target Start/End: Original strand, 30077385 - 30077461
Alignment:
Q  82 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 158  Q
    |||||||| |||||| |||||||||||||||||||| || || |||||||| |||||| || ||||| || ||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattagctgcgttggcgtgtccgtgtcc 30077461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 37283825 - 37283901
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||| ||||||||| |||| |||| ||| | || | |||||||||||||| |||| ||||||    
T  37283825 taattacactgaattatgtgattttctcagattattagcggtgcccgcatgtcagtgtccgtgtcatgtctggtgtc 37283901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 92 - 168
Target Start/End: Original strand, 41838131 - 41838207
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||| ||| || ||||||||||||| ||||| | |||||| ||||||||||| ||| ||||||||||| |||||||    
T  41838131 acacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtgtccgtatcgtgtc 41838207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 13203685 - 13203602
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||||||||| |||||||||||||| |||   ||| | |||||||||||  |||||||||| ||| || ||||||    
T  13203685 taattacactgaattatgtaattttctcaaattattagtgttgttgacgtatcagtgtttgtgtcgtgtcgggtatccgtatcc 13203602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Original strand, 24205749 - 24205796
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||| |||||||||| ||||||||||||||||||||||||| ||||    
T  24205749 tatgaaacacggacactcctcggattaggcgtgttccggtgtcagaca 24205796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 80 - 163
Target Start/End: Original strand, 31109514 - 31109597
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||||||||   || ||| |||||||| | | |||||||||||||| || | |||||||||| ||||||||||||||    
T  31109514 tgtccgacactgacacatatagttagactgaattgtttgattttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtc 31109597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 42874586 - 42874495
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| ||||||||||| || |||||| |||||||||||||||||||||| |  || | |||||| ||| || ||||  ||||||||||||    
T  42874586 gtgtccaacactgacacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgtccgtgttagtgtcgtgtccg 42874495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 4611578 - 4611532
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcgg 4611532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 174
Target Start/End: Complemental strand, 24858054 - 24857978
Alignment:
Q  101 attacactgaattatgtcattttct---caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    ||||||||||||||||| ||||| |   ||||||| || |||||||||||| ||  |||||||||||||||||||||    
T  24858054 attacactgaattatgtgatttttttttcaaattattaactgtgtcggcgtgtccatgtccgtgtcgtgtccggtgt 24857978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 29510232 - 29510282
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||| |||||    
T  29510232 cctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 29510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 148
Target Start/End: Original strand, 31236532 - 31236641
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccg--gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    ||||| |||||||||||||| || ||||  |||| ||   ||||||| ||| |||||   |||||||| |||||||||| |||||||||||||| ||||     
T  31236532 tatgaggcacggacacttctagggttagctgtgtcccatcgtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagca 31236631  T
Q  139 gtgtcggcgt 148  Q
    ||||||||||    
T  31236632 gtgtcggcgt 31236641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 143
Target Start/End: Complemental strand, 31514973 - 31514872
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagct 138  Q
    |||||||||||||||||| ||||||||||||||||    |||||| ||||  ||||| ||| |||| ||||||||||| | |||| |||||||| ||| |    
T  31514973 ctatgaagcacggacactcctcggattaggcgtgt---cgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagtt 31514877  T
Q  139 gtgtc 143  Q
    |||||    
T  31514876 gtgtc 31514872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 74
Target Start/End: Complemental strand, 39820547 - 39820513
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||||||||||||||||||||    
T  39820547 ctatgaagcacggacacttctcggattaggcgtgt 39820513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 39954294 - 39954352
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||||||| || |||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 168
Target Start/End: Complemental strand, 18407771 - 18407695
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||| |||||||||||||||||||| ||||| |  ||||| ||||||||||||| | || |||| |||||||||||    
T  18407771 gacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcggcatgtctgtgt-cgtgtcgtgtc 18407695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 22652106 - 22652057
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| |||||||||| ||||| |||||||| |||||    
T  22652106 ctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 22652057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 39820471 - 39820394
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||||| |||||| |||||||||||||||| ||   | ||| |||| || ||||| ||||||||||||||||||||    
T  39820471 attacactaaattatatcattttctcaaattattatacgggtcagcgtgtcggtgtctgtgtcgtgtccggtgtctgt 39820394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 1433413 - 1433353
Alignment:
Q  75 tccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattacta 135  Q
    ||||||||||||||| ||| |  || |||||| || |||||||||||||||||||||||||    
T  1433413 tccggtgtccgacaccgacgcatgttattacattggattatgtcattttctcaaattacta 1433353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 4673353 - 4673397
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||| |||||| || ||||||||||||||||||||||    
T  4673353 cctatgaagcacagacactccttggattaggcgtgttccggtgtc 4673397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 8343449 - 8343397
Alignment:
Q  37 cccctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||| ||||||  ||||||||||||||| |||||||| |||||    
T  8343449 cccctatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 80 - 200
Target Start/End: Complemental strand, 27101577 - 27101458
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 179  Q
    ||||||||||||||||   ||||| |||| |||||||| ||||| |||||||| |||| |||||||||| ||| ||||| | |||| | || |||| ||     
T  27101577 tgtccgacactgacacctataatt-cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtccatatcgtattcgatgtcggtg 27101479  T
Q  180 tccttatctatgcttcatagg 200  Q
    ||  |||| ||||||||||||    
T  27101478 tctgtatccatgcttcatagg 27101458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 4786336 - 4786411
Alignment:
Q  82 tccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||||| |||||   ||||||||||||||||||| ||||||| |||||| ||   |||||||||| ||||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 14692500 - 14692434
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    ||||||||||||||||||||| ||||||||| || ||||||| | || ||||||||||| ||| ||||    
T  14692500 ttacactgaattatgtcattt-ctcaaattattatctgtgtcagagtgtcagtgtccgtatcgggtcc 14692434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 17751775 - 17751732
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||    
T  17751775 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtc 17751732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 17760762 - 17760719
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||| |||||||| |||||||||||||||| ||||||||    
T  17760762 ctatgaagcgcggacactcctcggattaggcgtgtcccggtgtc 17760719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 22204705 - 22204622
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgt-cat-tttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||| |||||||||||| |||||||||||||||||| |  || ||| | |||||| ||| ||||||||||| |||||||||||    
T  22204705 gtgtctgacactgacacttgtaattacactgaattatatatatattttttaaattattagttgtgtcggcgtgtcagtgtccgt 22204622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 24196632 - 24196695
Alignment:
Q  119 attttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||| |||||||| ||| ||||||||||| || |||||||| |||| | ||||||||||||||    
T  24196632 attttttcaaattattagttgtgtcggcgtgtcggtgtccgtatcgtattcggtgtctgtatcc 24196695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 28883899 - 28883970
Alignment:
Q  105 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtct 176  Q
    |||||||||||||||||||||||||||| ||   ||| |||| | |||||||||||| | |||| |||||||    
T  28883899 cactgaattatgtcattttctcaaattattattcgtggcggcatgtcagtgtccgtgacatgtcaggtgtct 28883970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 144
Target Start/End: Original strand, 29447111 - 29447170
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    ||||| |||||| ||| ||||| |||||||||| |||||||||||||| ||| |||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcg 29447170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 166
Target Start/End: Complemental strand, 29776080 - 29776013
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtg 166  Q
    |||||| ||||||||| || |||||||||||||| |||| |||||| | | ||| |||||||||||||    
T  29776080 taattatactgaattacgtgattttctcaaattattagcagtgtcgacttgtcaatgtccgtgtcgtg 29776013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 41831947 - 41832002
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggc 146  Q
    |||||| ||| |||||||||||||||| ||||| |||||||| || ||||||||||    
T  41831947 gacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcggc 41832002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 11944709 - 11944627
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    |||||||||||| |||||| ||||| |||||||| || | |||||||||| | ||  ||||||||||||  |||||| |||||    
T  11944709 taattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgttagcatccgtgtcgtgtttggtgtccgtatc 11944627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 15131733 - 15131783
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| ||| ||| |||||||||  |||||||||||||    
T  15131733 cctatgaagcacggacacctctaggactaggcgtgtcgcggtgtccgacac 15131783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 22197670 - 22197720
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||| ||||||||||||| ||| ||||||||||| ||||||||| |||||    
T  22197670 cctataaagcacggacactcctcagattaggcgtgatccggtgtcggacac 22197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 24413499 - 24413533
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    ||||||||||||||||||||||||||||| |||||    
T  24413499 ctatgaagcacggacacttctcggattagacgtgt 24413533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 3951476 - 3951525
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||| ||| || |||||||||||||||| ||||| |||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacac 3951525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 14134743 - 14134710
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||||| ||||||||||||||    
T  14134743 taattacactgaattatgtgattttctcaaatta 14134710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 24727684 - 24727717
Alignment:
Q  43 tgaagcacggacacttctcggattaggcgtgttc 76  Q
    ||||||||| ||||||||||||||||||||||||    
T  24727684 tgaagcacgaacacttctcggattaggcgtgttc 24727717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Original strand, 34201061 - 34201094
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatta 132  Q
    |||||||| |||||||||||||||||||||||||    
T  34201061 taattacattgaattatgtcattttctcaaatta 34201094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 6065586 - 6065634
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| || | |||| ||||||||||||||| ||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggaca 6065634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 7442896 - 7442828
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||| |||||||||||||||||||| ||||| | |||||| |||| |||| ||| | | |||||||||    
T  7442896 acacttgtaattacactgaattatgtaattttatgaaattattagcggtgttggcatgttagtgtccgt 7442828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 11803389 - 11803341
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| |||||||||| ||||| || ||||| ||||    
T  11803389 ctatgaagcacggacactcctcggattagacgtgtacctgtgtcggaca 11803341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 137
Target Start/End: Original strand, 12559123 - 12559159
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagc 137  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  12559123 attacactgaattatatcattttctcaaattattagc 12559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 143
Target Start/End: Complemental strand, 14731756 - 14731712
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    |||||||||| |||||||| |||||||||||||| |||| |||||    
T  14731756 taattacactaaattatgtgattttctcaaattattagcagtgtc 14731712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 16988030 - 16987990
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgt 82  Q
    |||||||||||||||| ||||||||||| |||| |||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgt 16987990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 17751699 - 17751651
Alignment:
Q  119 attttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||| ||||||||| | |||||||||| ||||||||||||| ||||    
T  17751699 attttctgaaattactaccggtgtcggcgtgtcagtgtccgtgttgtgt 17751651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 167
Target Start/End: Complemental strand, 17760686 - 17760638
Alignment:
Q  119 attttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||| ||||||||| | |||||||||| ||||||||||||| ||||    
T  17760686 attttctgaaattactaccggtgtcggcgtgtcagtgtccgtgttgtgt 17760638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 85 - 157
Target Start/End: Original strand, 20679396 - 20679468
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||| ||||||  ||||||||||||| ||||| |||||||||||||| |||  |||||| | | ||||||||    
T  20679396 gacaccgacacttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtc 20679468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 27067300 - 27067387
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggc---gtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||||| |||||||||  ||||||||| |||||||||||| | |||  ||||||||   || |||||| | ||||||||||||    
T  27067300 cgacactgacacttgtaattaca--gaattatgtaattttctcaaatcattagtggtgtcggcagtgtgtcagtgactgtgtcgtgtccg 27067387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 182
Target Start/End: Complemental strand, 28642449 - 28642369
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||||||||||||| | ||| |||||||| || | |||||   || ||| ||||||||||||||||| |||| ||||||    
T  28642449 ttacactgaattatgtaaatttttcaaattattaaccgtgtcaatgtgtcattgtccgtgtcgtgtccgatgtccgtatcc 28642369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 28745539 - 28745471
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| |||||||||| | ||| |||||||| |||| ||||||  |||||| | |||||||||||||||    
T  28745539 ttacattgaattatgtgaatttttcaaattattagcagtgtcgatgtatcattatccgtgtcgtgtccg 28745471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Original strand, 29447040 - 29447088
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||| || ||||||||||||| | |||||| |||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacac 29447088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 33405379 - 33405475
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||   |||||||||| ||||||||  ||||||||||||| || | | | | | || ||||||||| |||||||||| |||||    
T  33405379 gtgtccgacaccgacacatataattacactaaattatgtgtttttctcaaattattaacagggccagtgtgtcagtgtccatgtcgtgtccagtgtc 33405475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 88)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 181
Target Start/End: Original strand, 19536360 - 19536495
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagc 137  Q
    ||||||||||| ||||||| ||||||||||||||||        ||||||| |||||| |||||||||||||||||||| ||||| | ||||||| |||     
T  19536360 cctatgaagcatggacactcctcggattaggcgtgt--------ccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagt 19536451  T
Q  138 tgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||    
T  19536452 tgtgtcggcgtgtcattgtccgtgtcgtgtccggtgtccgtatc 19536495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 39 - 197
Target Start/End: Complemental strand, 21616865 - 21616708
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    |||||||||||||||||||||| ||||||| ||||| ||||   | |||||  ||||   ||||||||||||||||||| |||||||||||||| ||||     
T  21616865 cctatgaagcacggacacttcttggattagccgtgt-ccggcaccggacacgtacacatataattacactgaattatgtgattttctcaaattattagcg 21616767  T
Q  139 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcat 197  Q
    |||||||||| || ||||||||||||||||  |||||||| ||| ||||  ||||||||    
T  21616766 gtgtcggcgtgtccgtgtccgtgtcgtgtcatgtgtctgtgtccgtatccgtgcttcat 21616708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 39 - 182
Target Start/End: Original strand, 20539631 - 20539772
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    ||||||||||||||||||| ||||||| ||||||||  ||     |||||| |||||| ||||||||||| |||||| | ||||| |||||||| |||||    
T  20539631 cctatgaagcacggacactcctcggatcaggcgtgtctcgcca--cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagct 20539728  T
Q  139 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||| ||| |||||||||||||||||||| ||||| ||||||    
T  20539729 gtgtcgacgtgtcagtgtccgtgtcgtgtccagtgtccgtatcc 20539772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 79 - 178
Target Start/End: Complemental strand, 15972937 - 15972838
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| |||||||||||||||| ||| ||||| |||||||| ||  ||||||||||| |||||||||||||||| || |||||||||    
T  15972937 gtgtccgacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatctggtgtctgt 15972838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 99 - 180
Target Start/End: Original strand, 21782833 - 21782914
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtat 180  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||  ||||||||||| ||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtccagtgtctgtat 21782914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 42832234 - 42832355
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg 141  Q
    |||||||| ||||||| || ||||||||||||| |||| ||| ||||| ||||||  ||||||||||||| ||||| |||||||||||||| |||| |||    
T  42832234 atgaagcaaggacactccttggattaggcgtgtcccggagtcggacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtg 42832333  T
Q  142 tcggcgtatcagtgtccgtgtc 163  Q
    |||| || || | |||||||||    
T  42832334 tcggtgtgtctgagtccgtgtc 42832355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 182
Target Start/End: Complemental strand, 21624331 - 21624227
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaa-ttactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 177  Q
    ||||||||||| |||||| |||||||||||||||||||  ||||| | ||| ||| ||||||||||||||| |||||||| ||||||||| ||||||| |    
T  21624331 gtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtcgtgttcggtgtccg 21624232  T
Q  178 tatcc 182  Q
    |||||    
T  21624231 tatcc 21624227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 30404845 - 30404936
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||| | |||||| |||||||||||||||||||| ||||| |||||||| || | |||||||||| |||||||||||||| ||||||    
T  30404845 gtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 18276579 - 18276489
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||| ||||| | |||||||||||||||| || |||||||||||||| |||| |||||||| |||||||||| || ||||||||||||||    
T  18276579 gacaccgacacacataattacactgaattaagtgattttctcaaattattagcggtgtcggcatatcagtgtctgtatcgtgtccggtgtc 18276489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 81 - 163
Target Start/End: Complemental strand, 37559039 - 37558957
Alignment:
Q  81 gtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||| |||||| ||||||||| |||||||||| |||||  ||||||| ||||||||||||||| ||||||||||||||    
T  37559039 gtccgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 2438714 - 2438808
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| | |||||| |||||||||| |||  |||||||||||||  |||||||||||    
T  2438714 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtcagcg--tcagtgtccgtgttttgtccggtgtc 2438808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 163
Target Start/End: Original strand, 21374705 - 21374778
Alignment:
Q  90 tgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| | ||||||||||||    
T  21374705 tgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 18841008 - 18841099
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| ||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||| |||||| |||| ||||||||| |||||||||||    
T  18841008 gtgtctgacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtccatgtcgtgtccg 18841099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 23718070 - 23717988
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||||||||| | |||||||||||| |||| ||||||| || |||||||||||||| ||||| ||||||||||||    
T  23718070 taattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatcc 23717988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 182
Target Start/End: Complemental strand, 24105742 - 24105660
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||||||||| | |||||||||||| |||| ||||||| || |||||||||||||| ||||| ||||||||||||    
T  24105742 taattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtcc-gtgtctgtatcc 24105660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 10535776 - 10535850
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||||||||||||||||||||||| || | |||||||||||| ||| || ||||||||| |||||||    
T  10535776 attacactgaattatgtcattttctcaaattattatcggtgtcggcgtattagtatctgtgtcgtgtacggtgtc 10535850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 21091786 - 21091696
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||| |||||||||||| |||||||||||||| ||||| ||||||| |||||| |||| ||||||| || ||||||||||| | |||||||    
T  21091786 tgtctgacactgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccgtcttgtgtccg 21091696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 15657923 - 15657834
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtg 173  Q
    |||||| |||| | |||||||||||||||||||| |||||  ||||||| ||| || |||||||| | ||||||||||||||||||||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccgtgtcgtgtccggtg 15657834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 163
Target Start/End: Complemental strand, 39323317 - 39323244
Alignment:
Q  90 tgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||| |||||||||||||||||||| ||||| |||||||| |||| |||||| ||| ||||||||||||||    
T  39323317 tgacacttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 175
Target Start/End: Complemental strand, 18422027 - 18421931
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||| |||||| |||||| |||||||||||||||||||| || || | |||||| ||  ||||||||||| |||||||||||||||| |||| ||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccgtgtcgtatccgatgtc 18421931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 30335476 - 30335392
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||| |||| | ||||||||||| |||||||||||||| |||||||| ||| |||||||||||   |||||||||||||||||    
T  30335476 cgacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccgtgtcgtgtc 30335392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 31284092 - 31283992
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    |||||||| || ||||||| |||||||||||||| |||| |||||||||| | ||||| |||||  ||||||||||| || ||| ||||| |||||||||    
T  31284092 taattacaatggattatgtgattttctcaaattattagcagtgtcggcgtgtaagtgtacgtgttatgtccggtgtccgtgtccgtatctgtgcttcata 31283993  T
Q  199 g 199  Q
    |    
T  31283992 g 31283992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 6940307 - 6940233
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgt 165  Q
    |||||| ||||||||||| |||||||| | ||| | |||||| ||||||||||||||| ||||||||||||||||    
T  6940307 gacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgt 6940233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 175
Target Start/End: Complemental strand, 31018689 - 31018558
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    ||||||||||| |||||| |||||||||| ||    |  ||||||||||| |||||   |||||||||| ||| |||| ||||||| |||||| |||| |    
T  31018689 ctatgaagcactgacactcctcggattagacg----cacgtgtccgacaccgacacctataattacactaaatcatgtgattttctgaaattattagcgg 31018594  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||| ||||| ||||||||| |||||| |||||||||    
T  31018593 tgttggcgtgtcagtgtccatgtcgtatccggtgtc 31018558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 157
Target Start/End: Original strand, 38117154 - 38117232
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||||||||  ||||| |||||||||| ||| ||||| ||||| |||||||| ||||||||||||||| ||||||||    
T  38117154 gtgtccgacaccaacacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 168
Target Start/End: Original strand, 20242722 - 20242811
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||||||||| |||||   ||||||||||||||||||| ||||||| |||  | ||| ||||||||||| ||||||||| |||||||||    
T  20242722 gtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtcgtgtc 20242811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 30717537 - 30717610
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcg 164  Q
    |||||| |||||||||||||||||||| ||||| |||||||| ||||| ||||||  | |||||||||||||||    
T  30717537 gacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtcg 30717610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 200
Target Start/End: Original strand, 34784997 - 34785098
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    |||||||||| |||||||| ||||||| |||  | ||| |||||||| || ||||||||||||||||||| || ||| || ||| ||||| |||||||||    
T  34784997 taattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtcgtgtctggggtccgtgtccgtatctgtgcttcata 34785096  T
Q  199 gg 200  Q
    ||    
T  34785097 gg 34785098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 175
Target Start/End: Original strand, 43586000 - 43586096
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||||| || |||||| |||||||||||||||||||||| |  || |||||| | ||| |||||||| ||  |||||||||||||    
T  43586000 gtgtccgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttatctgtgttgacgtgtcagtgtcagtaccgtgtccggtgtc 43586096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 11223864 - 11223947
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||| |||||| |||||||||||||||||||| ||||| ||||| || |||||||||| |||| || |||||| |||| ||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtctgtgtccatgtcatgtc 11223947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 23921355 - 23921264
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||| ||   ||||  ||||||||||||||||||||  | | |  ||||||||||||||||||| ||||||||||||||    
T  23921355 tatgaagcacggacactccttaaattaaacgtgttccggtgtccgacaccaatatttataattacactgaattatgtaattttctcaaatta 23921264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 24894433 - 24894370
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgt 162  Q
    ||||| ||||||||||||| ||||| | |||||| ||||||||||||||| |||||||||||||    
T  24894433 taattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtgtccgtgt 24894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 154
Target Start/End: Original strand, 12668423 - 12668493
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagt 154  Q
    |||||| ||||||  ||||||||||||||||||||||||| |||||||| ||| | ||||||||| |||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 168
Target Start/End: Original strand, 12940949 - 12941019
Alignment:
Q  98 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||||||||||||||| | ||||| |||||||| ||| ||||||  ||| |||||||||||||||||||    
T  12940949 gtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 23354669 - 23354743
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||| |||||| |||||||||||||||| || ||||||| || | || ||||||||||| |||||||||||    
T  23354669 attacactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtccggtgtc 23354743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Original strand, 36756344 - 36756430
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| ||||||  ||||||||||||||||||| ||||  |||||||| ||| ||||||| ||| |||||||| ||||||| ||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccg 36756430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 37419874 - 37419824
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||| |||||||||||||||| |||||||| |||||    
T  37419874 cctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 37419824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 27286307 - 27286376
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||||||| |||||||| || || |||||||| ||||  ||||||||||||||||||||| |||||||    
T  27286307 taattacacttaattatgtgatcttatcaaattattagcgttgtcggcgtatcagtgtccgtatcgtgtc 27286376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 199
Target Start/End: Complemental strand, 28677953 - 28677852
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc-gtgtccggtgtctgtatccttatctatgcttcat 197  Q
    ||||||||||||||||||| ||||| |||||||| |||| ||||||||||  ||||||| ||||| ||||||| |||  || | | ||||| ||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgttccagtgtcagtgtcagtgtccgttgtacgtgtacgtatctgtgcttcat 28677854  T
Q  198 ag 199  Q
    ||    
T  28677853 ag 28677852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 85 - 168
Target Start/End: Original strand, 14996224 - 14996308
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||| |||||| ||||||||||| |||||| | ||||| | ||||||| ||||||||||||| | |||||||||||||| ||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgtc 14996308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 164
Target Start/End: Complemental strand, 20473427 - 20473301
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccgg---tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 137  Q
    |||||||||||||||||  || | ||| | |||||||||   |||||||||  |||||| |||||||||||||||||| | | ||| | |||||| |||     
T  20473427 tatgaagcacggacactcttcaggttaagtgtgttccggccgtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagt 20473328  T
Q  138 tgtgtcggcgtatcagtgtccgtgtcg 164  Q
    ||||||||| | |||||||| ||||||    
T  20473327 tgtgtcggcatgtcagtgtctgtgtcg 20473301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 28412394 - 28412318
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||| ||||| |||||||| || | |||| | ||| | ||||||||||||||||| ||||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtctggtgtc 28412318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 896253 - 896181
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| |||| ||||| ||||||||||| || |||| |||||||||| |||||||  |||||||||||||||||    
T  896253 attacattgaaatatgtgattttctcaaactattagcagtgtcggcgtgtcagtgt--gtgtcgtgtccggtgtc 896181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 168
Target Start/End: Original strand, 23058389 - 23058527
Alignment:
Q  45 aagcacggacacttctcggattaggcgtgttccggtgtc--------------cgacactgacactcgtaattacactgaattatgtca-ttttctcaaa 129  Q
    |||||||||||||||||||||||||||||| ||||||||              |||||| |||||| |||||||||||| ||||||| | |||| |||||    
T  23058389 aagcacggacacttctcggattaggcgtgtcccggtgtcggacaacaccgacacgacaccgacacttgtaattacactggattatgtgatttttttcaaa 23058488  T
Q  130 ttactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||| ||  ||||| ||||| ||| |||||||||||||||    
T  23058489 ttattaattgtgtgggcgtgtcactgtccgtgtcgtgtc 23058527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 158
Target Start/End: Complemental strand, 27460070 - 27460011
Alignment:
Q  100 aattacactgaattatgtcattttct-caaattactagctgtgtcggcgtatcagtgtcc 158  Q
    ||||| |||||||||||||||||| | ||||||| ||||||||||||||| |||||||||    
T  27460070 aattatactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtcc 27460011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 129
Target Start/End: Original strand, 8300202 - 8300264
Alignment:
Q  67 aggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaa 129  Q
    |||||||| ||||||||| |||| ||||||  | |||||||| ||||||||||||||||||||    
T  8300202 aggcgtgtcccggtgtccaacaccgacacttatgattacactaaattatgtcattttctcaaa 8300264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 15909647 - 15909705
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||||||||||||||||| ||||||||||| |  ||||||| ||||||| ||||||||    
T  15909647 taattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgtc 15909705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 26769641 - 26769592
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| |||||||||||||||| || ||||| |||||    
T  26769641 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 26769592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 28596533 - 28596445
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||| ||||||  |||||||||||| |||||| || || |  |||||   ||||||||||||| ||| |||||||||||||||||    
T  28596533 gtgtccgacaccgacacttataattacactgacttatgtgatgtttttcaatta---gctgtgtcggcgtgtcattgtccgtgtcgtgtccg 28596445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 127
Target Start/End: Complemental strand, 33884116 - 33884067
Alignment:
Q  78 ggtgtccgacactgacactcgtaattacactgaattatgtcattttctca 127  Q
    ||||| |||||| |||||| ||||||||||||||| ||||||||||||||    
T  33884116 ggtgttcgacaccgacacttgtaattacactgaatcatgtcattttctca 33884067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 38117099 - 38117148
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||  |||||||||||||||| |||||||| |||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacac 38117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 11223793 - 11223841
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| ||| |||||||||||| |||||||| ||||    
T  11223793 ctatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 16069269 - 16069333
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||||||||| | ||||| | |||||| || | |||||||||| ||||||||||||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 29176367 - 29176411
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||    
T  29176367 cctatgaagcatgaacacttctcggattaggcgtgtttcggtgtc 29176411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 163
Target Start/End: Original strand, 34221504 - 34221576
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||| |||||| ||  |||||||||  |||| |||||||| ||||||||||||| ||||||| ||||||||    
T  34221504 gacacttgtaattgcatagaattatgtatttttttcaaattattagctgtgtcggcatatcagtatccgtgtc 34221576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 37411259 - 37411323
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||| |||||||||||||| |||||||||||||| |||| |||||||| | |||| ||| |||||    
T  37411259 taatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 19942382 - 19942335
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||| ||||||| |||||||||||||||| |||||||| |||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacac 19942335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 157
Target Start/End: Complemental strand, 31808134 - 31808063
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||||||||   ||||||||||||||||||| ||||| | |||||| |||| ||||||| || ||||||||    
T  31808134 acactgacacatataattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 37419802 - 37419727
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 159  Q
    |||||| | |||| |||||||||||||||| ||| ||||| |||||||| | ||  ||||||||| ||||||||||    
T  37419802 cgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccg 37419727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 37559096 - 37559053
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtc 37559053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 5040798 - 5040729
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtca--ttttctcaaattactagctgtgtcggc 146  Q
    ||||||||||| |||||| ||||||||| |||||||||| |  |||| |||||||| ||||||| |||||    
T  5040798 gtgtccgacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgtatcggc 5040729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 175
Target Start/End: Original strand, 11308021 - 11308094
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||||||| |||||||| || | |||||||  |||| |||| |||| | |||||||||||    
T  11308021 attacactgaattatgtcattttttcaaatta-tatccgtgtcggtatatcggtgttcgtgccatgtccggtgtc 11308094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 18420363 - 18420397
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    ||||||||||| |||||||||||||||||||||||    
T  18420363 ctatgaagcacagacacttctcggattaggcgtgt 18420397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 175
Target Start/End: Original strand, 23355016 - 23355086
Alignment:
Q  105 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||| |||||| |||||||||||||||| || ||||||| || | || ||||||||||| ||||| |||||    
T  23355016 cactaaattatatcattttctcaaattattatctgtgtcagcatgtcggtgtccgtgtcatgtcccgtgtc 23355086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 32200609 - 32200659
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| ||| ||| |||||||||  |||||||||||||    
T  32200609 cctatgaagcacggacacctctaggactaggcgtgtcgcggtgtccgacac 32200659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 34006929 - 34006979
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||| || | |||||| ||||||||||||| |||||    
T  34006929 cctatgaagcacggacactccttgaattaggtgtgttccggtgtcagacac 34006979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 198
Target Start/End: Complemental strand, 44860364 - 44860273
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||||||||||  |||||||||||||| |||| |||        ||||||||||||||||||| |||||  |||||| ||||  |||||||||    
T  44860364 taattacactgaattatgcgattttctcaaattattagcggtg--------tcagtgtccgtgtcgtgtctggtgtacgtatccgtatccgtgcttcata 44860273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 5367256 - 5367203
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||| |||||   ||||||||||||||||||| |||| |||||||||    
T  5367256 gtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaatta 5367203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 10535685 - 10535734
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||| ||||| |||||||||||||||| | |||||| |||||    
T  10535685 ctatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacac 10535734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 14996171 - 14996208
Alignment:
Q  52 gacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||| ||||||||||||||||||||||||| |||||    
T  14996171 gacactcctcggattaggcgtgttccggtgtcagacac 14996208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 175
Target Start/End: Original strand, 18420436 - 18420525
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||| ||||||  ||||| || |||||||||| |||||||||||||| |||| |||| ||||| ||||| |  || |||||| |||||||    
T  18420436 acaccgacacttataattgcattgaattatgtgattttctcaaattattagcagtgttggcgtgtcagtatatgtctcgtgttcggtgtc 18420525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 18571036 - 18570983
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||| ||||||||||||   | |||||| |||||||||||||||||||||||||    
T  18571036 gtgttcgacactgacacatatgattacattgaattatgtcattttctcaaatta 18570983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 148
Target Start/End: Complemental strand, 19574022 - 19573973
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||||||||||| ||||||| |||||| || | ||||||||||    
T  19574022 taattacactgaattatgttattttcttaaattattatcggtgtcggcgt 19573973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 35056998 - 35056949
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| ||| ||||||||||||| | ||||| |||||    
T  35056998 ctatgaagcacggacactcctcagattaggcgtgtttccgtgtcggacac 35056949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 36409642 - 36409711
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||||||| |||||||| ||||| ||||||||  ||| |||||||| | | ||| |||||||||||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggtgtcggcatgtgagtatccgtgtcgtgtc 36409711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 42511322 - 42511371
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| |||||||||| ||||| || ||||| |||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacac 42511371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 974806 - 974746
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    |||||| |||||| ||||||||||||||| |||| || || |||||||| ||| |||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 42 - 74
Target Start/End: Original strand, 2438661 - 2438693
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||| ||||||||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgt 2438693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 4332970 - 4332894
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||| |||||||||| |||||| ||||||| || | |||||||| | | ||| || ||| |||||||||||||    
T  4332970 taattacattgaattatgtgattttcccaaattattatcagtgtcggcatgtaagtatctgtgccgtgtccggtgtc 4332894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 17651681 - 17651633
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||| | | |||||||||||||  |||||||||||||    
T  17651681 tatgaagcacggacacctttaggattaggcgtgtcgcggtgtccgacac 17651633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 18589260 - 18589171
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||||||||||||||   || ||| |||||||| ||| |||||||  ||||| |||| |||||||||| | ||| |||||||| ||||||    
T  18589260 gtgtccgacactgacacatatagttagactgaattgtgtaattttct--aattattagcagtgtcggcgtgttagtatccgtgtcatgtccg 18589171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 200
Target Start/End: Original strand, 18631467 - 18631515
Alignment:
Q  152 agtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatagg 200  Q
    |||||||||||||||||||||||| || | | ||||| |||||||||||    
T  18631467 agtgtccgtgtcgtgtccggtgtccgtgttcgtatctgtgcttcatagg 18631515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 177
Target Start/End: Original strand, 30298464 - 30298540
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctg 177  Q
    ||||||||||||||||||||||| | |||||| || | |||||| ||| || | || ||| ||||||| ||||||||    
T  30298464 attacactgaattatgtcattttattaaattattatcggtgtcgacgtgtcggcgttcgtatcgtgtctggtgtctg 30298540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 32749825 - 32749869
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaa 128  Q
    |||||||||||||  | ||||||||||||||||| ||||||||||    
T  32749825 cgacactgacacttattattacactgaattatgtgattttctcaa 32749869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 33153483 - 33153419
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||| |||||| |||||||||||||||||||| ||||| | |||| | ||| ||| |||||||    
T  33153483 cgacacggacacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgt 33153419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Complemental strand, 35449557 - 35449489
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||||||||||| ||| |||||||||||||| || | |||| ||| | |||||||  |||||||||    
T  35449557 taattacactgaattctgtgattttctcaaattattaacagtgttggcttgtcagtgtttgtgtcgtgt 35449489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 37986821 - 37986765
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||||| || ||| ||||||| |||||||| || |||||||||||| ||||||||    
T  37986821 attacactcaaatatatcattttttcaaattattatctgtgtcggcgtgtcagtgtc 37986765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 132
Target Start/End: Complemental strand, 40682025 - 40681993
Alignment:
Q  100 aattacactgaattatgtcattttctcaaatta 132  Q
    ||||||| |||||||||||||||||||||||||    
T  40682025 aattacattgaattatgtcattttctcaaatta 40681993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 4e-26; HSPs: 122)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 84 - 200
Target Start/End: Original strand, 6612171 - 6612287
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| || |||| ||||||| ||| |||||||||||||||||||||  || |||     
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgtccg 6612270  T
Q  184 tatctatgcttcatagg 200  Q
    ||||| |||||||||||    
T  6612271 tatctgtgcttcatagg 6612287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 22881566 - 22881689
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgt-----ccgacactgacactcgtaattacactgaattatgtcattttctcaaattac 133  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||     ||||||| |||||| ||||||||||| |||||||| ||||| ||||||||     
T  22881566 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattat 22881665  T
Q  134 tagctgtgtcggcgtatcagtgtc 157  Q
    ||| ||||||||||| ||||||||    
T  22881666 tagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 39 - 199
Target Start/End: Original strand, 29144319 - 29144472
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagct 138  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||||||       |||||||||||| ||||| |  |||| |||||||| |||||    
T  29144319 cctatgaagcacggacactcttcggattaggcgtgttccggtgtcggacactt------gtaattacactgcattatctatttttttcaaattattagct 29144412  T
Q  139 gtgtcggcgtatcagtgtccgtgt-cgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    ||||||||||||||||||| |||| ||||||  || ||||| ||| |||| |||||||||||    
T  29144413 gtgtcggcgtatcagtgtcagtgtccgtgtc--gtatctgtgtccgtatccatgcttcatag 29144472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 40 - 170
Target Start/End: Original strand, 48450550 - 48450673
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||||||||||||||| |||||||||| ||||| || ||||||||||||       ||||||||||| |||||||| ||||| |||||||| ||||||    
T  48450550 ctatgaagcacggacactcctcggattagacgtgt-cctgtgtccgacactt------gtaattacactaaattatgttattttttcaaattattagctg 48450642  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||| ||||| |||||||||||||||||||||    
T  48450643 tgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 398780 - 398882
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||||||||||| ||||| |||||||| |||| |||||||||| |||||||||||||||||||||||||| |  ||| ||||  |||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcata 398879  T
Q  199 gga 201  Q
    |||    
T  398880 gga 398882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 198
Target Start/End: Original strand, 3490352 - 3490498
Alignment:
Q  45 aagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    ||||||||||||||||||||||||  |||| ||  |||| ||||| |||||| ||||||||||||||| ||||  ||||||||||||| |||| ||||||    
T  3490352 aagcacggacacttctcggattagatgtgtcccaatgtcggacac-gacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcg 3490450  T
Q  145 gcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||      ||||| |||||||||||||||||||||||| ||||  |||||||||    
T  3490451 gc------gtgtcagtgtcgtgtccggtgtctgtatccgtatccgtgcttcata 3490498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 79 - 200
Target Start/End: Original strand, 41877465 - 41877586
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| ||||||||||| |||||||| |||||||||||||| |||| ||||||||||| ||||||| |||||||||| ||| ||  |    
T  41877465 gtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtctggtatccat 41877564  T
Q  179 atccttatctatgcttcatagg 200  Q
     ||| ||||  |||||||||||    
T  41877565 gtccgtatccgtgcttcatagg 41877586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 35702542 - 35702661
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccg--gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 137  Q
    |||||||||||||||||| |||||||||||||||| ||   |||||||||||||||||| ||||||||||| |||||| | |  || |||||||| ||||    
T  35702542 ctatgaagcacggacactcctcggattaggcgtgtcccatcgtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagc 35702641  T
Q  138 tgtgtcggcgtatcagtgtc 157  Q
    ||||||||| | ||||||||    
T  35702642 tgtgtcggcatgtcagtgtc 35702661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 31015095 - 31015008
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    |||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||  |||||| |||||||||| |||||||||||    
T  31015095 gacacttgtaattacactgaattatgtgattttctcaaattattagctgtgtaggcgcgtcagtgcccgtgtcgtgcccggtgtctgt 31015008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 1486709 - 1486823
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| ||||||  ||||||||||||||||||| ||||| |||||||| |||||||||| |||| ||||| |||||||||| |||||| || || |||     
T  1486709 cgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtcgtatccggtatccgtgtccg 1486808  T
Q  184 tatctatgcttcata 198  Q
    |||| ||||||||||    
T  1486809 tatccatgcttcata 1486823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 182
Target Start/End: Original strand, 5927336 - 5927438
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 179  Q
    ||||||||||||||||| ||||||||| | |||||| | ||||| |||||||| |||| ||||  |||| |||||||||||||||||||||||||| |||    
T  5927336 tgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccggtgtccgta 5927435  T
Q  180 tcc 182  Q
    |||    
T  5927436 tcc 5927438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 41 - 174
Target Start/End: Complemental strand, 9103741 - 9103609
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgt 140  Q
    |||||||||||||||||  |  |||||||||| || ||||||||||||| |||||| ||| ||| ||| |||||||| ||||| |||||||| || ||||    
T  9103741 tatgaagcacggacactcttaagattaggcgtttttcggtgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgt 9103643  T
Q  141 gtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    |||||||| |||||||||| ||| |||| |||||    
T  9103642 gtcggcgtgtcagtgtccgagtcctgtcaggtgt 9103609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 142
Target Start/End: Original strand, 25452108 - 25452206
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg 141  Q
    |||||||||||||||| |||| |||||||||||||||||||| ||||| ||||  | ||||||||||||||||||  |||||||||||||| |||| |||    
T  25452108 atgaagcacggacactgctcgaattaggcgtgttccggtgtctgacaccgaca--cataattacactgaattatgagattttctcaaattattagcagtg 25452205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 204
Target Start/End: Original strand, 42359445 - 42359569
Alignment:
Q  80 tgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgta 179  Q
    |||||||||| |||||| |||||||||||||||| ||| ||||| |||||||| ||| |||||| |||| ||||||||||||| |||| ||||||  ||     
T  42359445 tgtccgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccgtgttgtgtacggtgttcgtg 42359544  T
Q  180 tccttatctatgcttcataggatac 204  Q
    ||| ||||  |||||||||| ||||    
T  42359545 tccgtatccgtgcttcatagaatac 42359569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 79 - 163
Target Start/End: Original strand, 46348378 - 46348462
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| |||||| ||||||||||| |||||| | ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  46348378 gtgtccgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 84 - 171
Target Start/End: Original strand, 5376500 - 5376587
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccgg 171  Q
    |||||| ||||||  ||||||||||||||||||| ||||||| |||||| |||| |||||||||| | ||||||||||||||||||||    
T  5376500 cgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccgg 5376587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 39 - 148
Target Start/End: Complemental strand, 13436563 - 13436453
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttc-cggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagc 137  Q
    |||||||||||||||||||||||||||||| |||||||   |||||||||||  ||||   ||||||||||||||||||| |||| || |||||| ||||    
T  13436563 cctatgaagcacggacacttctcggattagtcgtgttctacgtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagc 13436464  T
Q  138 tgtgtcggcgt 148  Q
     ||||||||||    
T  13436463 agtgtcggcgt 13436453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 44 - 187
Target Start/End: Original strand, 48040418 - 48040565
Alignment:
Q  44 gaagcacggacacttctcggattaggcgtgttccggtgtccgacact---gacactcgtaattacactgaattatgtcat-tttctcaaattactagctg 139  Q
    |||||||||||||| |||  ||||||||||| || ||||| |||||    |||||| ||| ||||||| || ||||| |  ||| |||||||| || |||    
T  48040418 gaagcacggacactcctccaattaggcgtgtcccagtgtcggacacgaccgacacttgtatttacactaaaatatgtgacctttttcaaattattatctg 48040517  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatc 187  Q
    ||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  48040518 tgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgtatccatatc 48040565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 2896140 - 2896212
Alignment:
Q  103 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||| ||||||| ||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgttgtgtccgttgtc 2896212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 199
Target Start/End: Original strand, 38078656 - 38078771
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||| ||||||||| |||||||||| ||||| |||||||| ||||||||||| ||| |||||||     |||||||||||||| ||    
T  38078656 gtgtccgacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt-----tcgtgtccggtgtccgt 38078750  T
Q  179 atccttatctatgcttcatag 199  Q
     ||| ||||  ||||||||||    
T  38078751 gtccgtatccgtgcttcatag 38078771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 10572604 - 10572687
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||| ||||||||| |||||||||||||| |||  |||||||||| ||||||| | |||||||||||||||| ||||||    
T  10572604 taattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtgttcatgtcgtgtccggtgtccgtatcc 10572687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 182
Target Start/End: Original strand, 19562636 - 19562718
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||| ||||  |||||||||||||| |||| |||||||||| ||||||| ||||| |||||||||||||||||||    
T  19562636 taattacactgaactatgagattttctcaaattattagcagtgtcggcgtgtcagtgttcgtgt-gtgtccggtgtctgtatcc 19562718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 79 - 161
Target Start/End: Original strand, 22515882 - 22515964
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtg 161  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||| |||||||| |||||||||| |||| || |||||||||    
T  22515882 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtctgcgtgtccgtgtccgtg 22515964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 84 - 198
Target Start/End: Original strand, 31694710 - 31694824
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtca--ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatc 181  Q
    |||||| |||||| ||||||| |||||||||||| |  |||| |||||||| ||||| ||||| ||||||||||||  |||||||||||||||| |||||    
T  31694710 cgacaccgacacttgtaattatactgaattatgtgattttttttcaaattattagctatgtcgacgtatcagtgtc--tgtcgtgtccggtgtccgtatc 31694807  T
Q  182 cttatctatgcttcata 198  Q
    | ||||  |||||||||    
T  31694808 cgtatccgtgcttcata 31694824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 1262928 - 1262855
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 172  Q
    |||||| | |||||||||| |||||||||||||| ||||||||||||||| || |||| |||||||||||||||    
T  1262928 taattatattgaattatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtcgtgtccggt 1262855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 20157367 - 20157444
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||||||||| ||||||||| |||| |||| ||||||  || |||||| ||||||||||||||||||||||    
T  20157367 attacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccggtgtctgt 20157444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 263
Target Start/End: Original strand, 39832752 - 39832809
Alignment:
Q  206 gtatgtgctcctaaactaaatgtcttctaagtgtgtaagatctgccagaggataccct 263  Q
    ||||||||| |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  39832752 gtatgtgcttctaaactaaatgtcttctaagtgtgtaacatctgtcagaggataccct 39832809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 39 - 123
Target Start/End: Original strand, 46940747 - 46940832
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac-tgacactcgtaattacactgaattatgtcatttt 123  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||| |||||  || ||| ||||||||||| |||||||| |||||    
T  46940747 cctatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacacgcgaaacttgtaattacacttaattatgttatttt 46940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 199
Target Start/End: Original strand, 10577750 - 10577850
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||| ||| ||| ||||||| |||  | ||||||||||||||| || ||||||||||||||||||||||| || ||| ||||  |||||||||    
T  10577750 taattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 10577849  T
Q  199 g 199  Q
    |    
T  10577850 g 10577850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 161
Target Start/End: Original strand, 12443422 - 12443537
Alignment:
Q  45 aagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    ||||||||| ||  ||||||||||| ||||  ||||||||||||| | |||    |||||||||||||||||| |||||||||||||| |||||||||||    
T  12443422 aagcacggatacccctcggattaggtgtgtctcggtgtccgacac-gtcacatacaattacactgaattatgtgattttctcaaattattagctgtgtcg 12443520  T
Q  145 gcgtatcagtgtccgtg 161  Q
    |||| || || ||||||    
T  12443521 gcgtgtccgtatccgtg 12443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 79 - 170
Target Start/End: Original strand, 19058851 - 19058943
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatc-agtgtccgtgtcgtgtccg 170  Q
    ||||||||||| |||||| |||||||||||||||||||| || || | |||||| ||||||||||||||| || |||||  ||||||||||||    
T  19058851 gtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtcaagtgtgtgtgtcgtgtccg 19058943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 40917808 - 40917719
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| || ||| ||||||||||| |||| ||  ||||| |||||||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  40917808 cgacaccgagacttgtaattacacttaattgtg--attttttcaaattattagctgtgtcggcgtgtcagtatccgtgtcgtgtccggtgtc 40917719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 200
Target Start/End: Complemental strand, 47989556 - 47989441
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||| |||||| |||||||||||||||||||| ||||| | |||||| ||  ||||||||||| |||||||| |||||||||| ||| || || ||      
T  47989556 cgacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtctgtgtcgtgtctggtatccgtgtctg 47989458  T
Q  184 tatctatgcttcatagg 200  Q
    |||| ||||||||||||    
T  47989457 tatccatgcttcatagg 47989441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 170
Target Start/End: Complemental strand, 6427394 - 6427323
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||||| |||||||||| |||||||||||||| |||| |||| ||||| |||||||||||| ||||||||    
T  6427394 taattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccg 6427323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 175
Target Start/End: Original strand, 7918211 - 7918302
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||   ||||||||||||||||||| |||||||||||||| |||   |||| |||| ||| |||| |||||||||||||||||    
T  7918211 cgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtc 7918302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 46 - 175
Target Start/End: Original strand, 13011172 - 13011307
Alignment:
Q  46 agcacggacacttctcggattaggcgtgttccggtgt-----ccgacactgacactcgtaattacactgaattatgtcattttct-caaattactagctg 139  Q
    |||||||||||| ||||||||||| |||||| |||||     || | ||  ||||| ||||||||||| |||||||| ||||| | ||||||| ||||||    
T  13011172 agcacggacactcctcggattaggtgtgttctggtgttgtgtccaaaaccaacacttgtaattacacttaattatgtgatttttttcaaattattagctg 13011271  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||| | ||||||| |||||||||| |||||||    
T  13011272 tgtcggcatgtcagtgttcgtgtcgtgttcggtgtc 13011307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 91 - 170
Target Start/End: Original strand, 14359529 - 14359607
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| ||||||||||| |||||||| ||||| |||||||| ||||||||||||||| || ||||| ||||||||||||    
T  14359529 gacacttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccg 14359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 86 - 169
Target Start/End: Complemental strand, 21378635 - 21378552
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    |||| |||||| |||||||||||||||||||| ||||| |||| ||| |||||||||||| || ||  ||||||||||||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtcc 21378552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 31672890 - 31672969
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtcc 158  Q
    ||||||||||| || ||| ||||||||||||||||| || ||||| |||||||| |||||||||||| || |||||||||    
T  31672890 gtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcc 31672969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 34298480 - 34298405
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    ||||||||||||||||||| |||||||||||||| |||  ||||||| || ||||| ||||||||||||| |||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtctggtgt 34298405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 2288124 - 2288215
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||| |||| | ||||||||||||||| || |||||||||||| ||||  | |||||||| |||||||||| ||||||| ||||||    
T  2288124 cctatgaagcactgacattcctcggattaggcgtgctcaggtgtccgacaccgaca--cataattacattgaattatgtgattttcttaaatta 2288215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 5944342 - 5944249
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttct--caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| ||||||  ||||||||||||||||||| ||||| |  ||||||| |||||||| |||||| |||||||| |||||||||||| ||||    
T  5944342 cgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgtc 5944249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 36878505 - 36878447
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||    
T  36878505 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 36878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 92 - 153
Target Start/End: Complemental strand, 113350 - 113289
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcag 153  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||    
T  113350 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 168
Target Start/End: Complemental strand, 9709884 - 9709795
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||||||||| |||||   ||||||||  ||||||||| |||||||||||||| |||| |||| ||| | |||||||||||||||||||    
T  9709884 gtgtccgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtcgtgtc 9709795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 39 - 159
Target Start/End: Original strand, 24334663 - 24334781
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtca--ttttctcaaattactag 136  Q
    ||||||||||||||||||| || ||||||||||||     ||||||||||| |||||| ||||||||||||||||||| ||  |||| |||||| | |||    
T  24334663 cctatgaagcacggacactacttggattaggcgtgac---gtgtccgacaccgacacttgtaattacactgaattatg-cattttttttcaaatgattag 24334758  T
Q  137 ctgtgtcggcgtatcagtgtccg 159  Q
    ||||||||| || || |||||||    
T  24334759 ctgtgtcggtgtgtccgtgtccg 24334781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 19324606 - 19324530
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||||||||||| ||||||||||||||  ||| |||||| |||||||||| | |||  ||||||||||||    
T  19324606 taattacactgaattatgtgattttctcaaattatcagcagtgtcgacgtatcagtgcctgtgctgtgtccggtgtc 19324530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 159
Target Start/End: Complemental strand, 37598895 - 37598816
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccg 159  Q
    ||||||||||| ||||||  ||||||||||||||| ||| ||||| |||||||| ||| ||||||||||| ||||||||||    
T  37598895 gtgtccgacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 37598816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 170
Target Start/End: Original strand, 5898281 - 5898352
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||||||||||| ||||| ||| |||| |||| |||||||||| |||||||| ||||| ||||||    
T  5898281 taattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccg 5898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 88 - 170
Target Start/End: Original strand, 37055860 - 37055942
Alignment:
Q  88 actgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| ||| ||||||||||| |||||||| |||||||||||||| |||| || |||  ||||||||||| ||||| ||||||    
T  37055860 actgatacttgtaattacactaaattatgtaattttctcaaattattagcagtatcgatgtatcagtgtctgtgtcatgtccg 37055942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 1815321 - 1815240
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||| ||||| |||||| |||||||||||||||||||| ||||| | |||| | ||  ||||||||||| |||||||||||    
T  1815321 gtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgt 1815240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 15641048 - 15641121
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||||| |||| ||||||| |||||| |||| |||||||| | |||||||||||||| |||||| ||||    
T  15641048 ttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgtc 15641121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 132
Target Start/End: Complemental strand, 18337393 - 18337340
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||| |||||| |||||||||||||||||||| ||||| ||||||||    
T  18337393 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaatta 18337340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 18556470 - 18556535
Alignment:
Q  98 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||| | |||||||| || || |||||||| ||||||||||||||| ||||||||||||||    
T  18556470 gtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 157
Target Start/End: Original strand, 24577186 - 24577259
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||| |||||| |||||||||||||||||||| ||||| |||||||| ||| |||||| |||| || |||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtccgtgtc 24577259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 38 - 83
Target Start/End: Original strand, 31694637 - 31694682
Alignment:
Q  38 ccctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||    
T  31694637 ccctatgaagcacggacactcctcagattaggcgtgttccggtgtc 31694682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 38503364 - 38503263
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||||| ||| | |||||||||||||| |||| ||||||| || | |||||||||||| ||||| ||||| || ||| ||||  ||| |||||    
T  38503364 taattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcccgtgtccgtgtccgtatccgtgcatcata 38503265  T
Q  199 gg 200  Q
    ||    
T  38503264 gg 38503263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 84 - 160
Target Start/End: Original strand, 1704992 - 1705068
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    |||||| |||||| |||||||| ||||||||||| ||||| |||||||| ||| |||||||| || || ||||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgt 1705068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 1864895 - 1864962
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||| |||| ||| || |||||||||    
T  1864895 taattacactgaattatgtgattttctcaaattattaactgtgtcggtgtat-agtatctgtgtcgtgt 1864962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 17831548 - 17831604
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||||||||| |||| |||||||||||||| |||| |||||||||| ||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 79 - 146
Target Start/End: Complemental strand, 51410089 - 51410021
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggc 146  Q
    ||||||||||| |||||| |||||||||||||||||||| | |||| |||||||| ||| |||||||||    
T  51410089 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcggc 51410021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 609482 - 609573
Alignment:
Q  108 tgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    |||||||||| |||||||||||||| |||  |||||||||| |||||||   ||||||||||| ||||||| ||| |||   ||||||||||    
T  609482 tgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgtctgtgtccgtatacgtgcttcatag 609573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 15323206 - 15323131
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    ||||||||| |||||||| ||||| |||||||| || |||| ||| | | ||||||||| ||||||||||||||||    
T  15323206 aattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccggtgtc 15323131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 199
Target Start/End: Original strand, 18190115 - 18190215
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctat 190  Q
    |||||| |||||||||||||||||||| ||||| |||||||| ||| ||||        ||||| ||||||||||||||||||||  | ||| |||| ||    
T  18190115 gacacttgtaattacactgaattatgtaattttttcaaattattaggtgtg--------tcagtatccgtgtcgtgtccggtgtccatgtccgtatccat 18190206  T
Q  191 gcttcatag 199  Q
    |||||||||    
T  18190207 gcttcatag 18190215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 18471352 - 18471242
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttct--caaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatct 188  Q
    |||||| ||||||| |||||||||||| ||||| |  ||||||| ||||||||||| ||  ||| |||||||||||| |||| | || || ||| |||||    
T  18471352 gacacttgtaattatactgaattatgtgattttttttcaaattattagctgtgtcgacgggtcattgtccgtgtcgtatccgatatccgtgtccatatct 18471253  T
Q  189 atgcttcatag 199  Q
     ||||||||||    
T  18471252 gtgcttcatag 18471242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 18556385 - 18556428
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||||||||||||||||||| || |||||    
T  18556385 ctatgaagcacggacacttctcggattaggcgtgtcccagtgtc 18556428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 174
Target Start/End: Original strand, 21366039 - 21366110
Alignment:
Q  103 tacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    ||||||||||||||| ||||| | |||||| |||||||| |||||| || |||| |||||||||| ||||||    
T  21366039 tacactgaattatgttattttttaaaattattagctgtgccggcgtgtcggtgttcgtgtcgtgttcggtgt 21366110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 100 - 167
Target Start/End: Original strand, 23636065 - 23636132
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    |||||||||||||||||| |||||||||||||  | || || ||||||| ||| ||||||||||||||    
T  23636065 aattacactgaattatgtaattttctcaaatttttggcggtttcggcgtgtcaatgtccgtgtcgtgt 23636132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 9828175 - 9828125
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||| |||||    
T  9828175 cctatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 9828125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 145
Target Start/End: Original strand, 40258928 - 40258994
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||| ||||| |||||| |||||||||||||||||||| ||||| |||||||| ||  ||||||||    
T  40258928 gtgtctgacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcgg 40258994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 40917880 - 40917830
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||| | |||||||||||||||| |||||||| |||||    
T  40917880 cctatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacac 40917830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 175
Target Start/End: Original strand, 16297297 - 16297374
Alignment:
Q  98 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||||||| ||| ||||| ||| |||| | ||||||||| ||| ||||| ||||| ||||||||| ||||    
T  16297297 gtaattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtc 16297374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 28273089 - 28273174
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| |||||| |||||||||||||||||| | ||||| |||||| | ||| |||||| || | ||||||||| |||| ||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtgtccttgtcatgtccg 28273174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 32461393 - 32461442
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||||| ||||||||||||| || ||||| |||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacac 32461442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 42359391 - 42359432
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||||||||| |||||||||||||||| ||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtc 42359432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 43492489 - 43492558
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||| ||||| ||||| | ||||||||| |||||| || ||||||||||||||||||  ||||||||||    
T  43492489 gtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtcggcgt 43492558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 6415016 - 6415080
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||| |||| ||||||| |||||||||||| | ||||  ||||||||| ||||||||||||||    
T  6415016 taattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtc 6415080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 16927200 - 16927268
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgt 167  Q
    ||||||||||||||||| | ||||| |||||||| ||||| || || ||| |||||||| |||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtcgtgt 16927268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 17754352 - 17754280
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    |||||||||||||||| ||||| |||||||| |||| ||||||| || |||| ||| ||||||| | ||||||    
T  17754352 ttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgt 17754280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 21365991 - 21366035
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||| ||||||||||||||||  |||||||    
T  21365991 cctatgaagcacggacactcctcggattaggcgtgtctcggtgtc 21366035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 83
Target Start/End: Complemental strand, 22947850 - 22947806
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||| |||||||||||||||| | ||||||    
T  22947850 cctatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 25361945 - 25361897
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||   ||||||||||||||||||| ||||||||||||||    
T  25361945 cgacactgacacatataattacactgaattatgtgattttctcaaatta 25361897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 101 - 145
Target Start/End: Original strand, 26238129 - 26238173
Alignment:
Q  101 attacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||    
T  26238129 attacactgaattatgttattttctcaaattattagcggtgtcgg 26238173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 98 - 170
Target Start/End: Original strand, 27471580 - 27471652
Alignment:
Q  98 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||||||||||||||||||  ||||||||||||| |||| || |||| || |||||||  |||||| |||||    
T  27471580 gtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtcgcgtccg 27471652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 37598952 - 37598916
Alignment:
Q  38 ccctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||||| ||||||||||||||||    
T  37598952 ccctatgaagcacggacactcctcggattaggcgtgt 37598916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 143
Target Start/End: Complemental strand, 40181935 - 40181871
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtc 143  Q
    ||||||||||| || ||   ||||||||||||||||||| |||||||||||||| |||| |||||    
T  40181935 gtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattagcagtgtc 40181871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 42325679 - 42325623
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacac 95  Q
    |||||||||||| |||||| |||| |||||| |||| ||| ||||||||||||||||    
T  42325679 cctatgaagcacagacactcctcgaattaggtgtgtcccgatgtccgacactgacac 42325623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 47989627 - 47989579
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| |||||||||||||||| ||| |||| ||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagaca 47989579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 132
Target Start/End: Complemental strand, 3921725 - 3921678
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||| | | |||||| |||||||||||||||||||||||||    
T  3921725 gacactgacacgcatgattacattgaattatgtcattttctcaaatta 3921678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 155
Target Start/End: Complemental strand, 6332729 - 6332659
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtg 155  Q
    |||||| || ||| |||||||||||||||||||| ||||| |||||||| ||| |||||| | |||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtgatttt-tcaaattattagttgtgtccgtgtatcagtg 6332659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 9630635 - 9630678
Alignment:
Q  139 gtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    |||||||||| ||||||||||||| ||||| |||||||||||||    
T  9630635 gtgtcggcgtgtcagtgtccgtgttgtgtctggtgtctgtatcc 9630678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 16297223 - 16297270
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||| |||||||||||||||| | |||||| |||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacac 16297270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Complemental strand, 17778670 - 17778623
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||| |||||||||||||||||| ||| |||||||| |||||    
T  17778670 atgaagcacgaacacttctcggattaggcatgtcccggtgtcggacac 17778623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 86 - 129
Target Start/End: Original strand, 18946036 - 18946079
Alignment:
Q  86 acactgacactcgtaattacactgaattatgtcattttctcaaa 129  Q
    ||||| |||||||| |||||| ||||||||||||||||||||||    
T  18946036 acactcacactcgtgattacattgaattatgtcattttctcaaa 18946079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 23705422 - 23705469
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||  ||||||||||||||||| ||||| |||||||||||||    
T  23705422 atgaagcacatacacttctcggattaggtgtgttgcggtgtccgacac 23705469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 25098570 - 25098617
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggc 146  Q
    ||||||||||||||||||| ||||||||||||||  ||| ||||||||    
T  25098570 taattacactgaattatgtgattttctcaaattatcagcggtgtcggc 25098617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 40 - 83
Target Start/End: Original strand, 27965940 - 27965983
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    |||||||||| ||||||| |||||||||||||||| ||||||||    
T  27965940 ctatgaagcatggacactcctcggattaggcgtgtcccggtgtc 27965983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 163
Target Start/End: Original strand, 34712383 - 34712462
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||||   |||||||||| |||||||| |||||||||||||| |||| ||| ||| || | | ||||||||||    
T  34712383 cgacactgacacatataattacactaaattatgttattttctcaaattattagcagtgacggtgtgttaatgtccgtgtc 34712462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 182
Target Start/End: Original strand, 39130762 - 39130865
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgt 178  Q
    ||||||||||| |||||   |||||||||| |||||| | ||||||| |||||| ||   ||||| |||| ||| | ||| |||||||||||||||| ||    
T  39130762 gtgtccgacaccgacacatataattacactaaattatataattttctaaaattattaatagtgtcagcgtgtcaatatccatgtcgtgtccggtgtccgt 39130861  T
Q  179 atcc 182  Q
    ||||    
T  39130862 atcc 39130865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 90
Target Start/End: Original strand, 48632322 - 48632373
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacact 90  Q
    |||||||||||||||||| ||| ||| |||||||||  ||||||||||||||    
T  48632322 cctatgaagcacggacacctctaggactaggcgtgtcgcggtgtccgacact 48632373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 6427595 - 6427545
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||||  || |||||||||||| |||||||| |||||    
T  6427595 cctatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacac 6427545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 15765878 - 15765828
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||||  ||||||||||||||| || ||||| |||||    
T  15765878 cctatgaagcacggacactcttcggattaggcgtgtcccagtgtcagacac 15765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 74
Target Start/End: Original strand, 22515827 - 22515861
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||||||||| ||||||||||||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgt 22515861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Complemental strand, 23738722 - 23738676
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    ||||| ||||||||||||| ||||| |||||||| ||||||||||||    
T  23738722 taattgcactgaattatgtgattttttcaaattattagctgtgtcgg 23738676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 145
Target Start/End: Original strand, 40747788 - 40747834
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcgg 145  Q
    |||||||| ||||||||||||||||||||||||| || | |||||||    
T  40747788 taattacattgaattatgtcattttctcaaattattatccgtgtcgg 40747834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 132
Target Start/End: Complemental strand, 42325601 - 42325571
Alignment:
Q  102 ttacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||||||||||||||||||||||    
T  42325601 ttacactgaattatgtcattttctcaaatta 42325571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 83
Target Start/End: Original strand, 1486646 - 1486687
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||| |||||| |||||||||||||||| ||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtc 1486687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Original strand, 10474997 - 10475050
Alignment:
Q  104 acactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    |||||||||||||| |||||||||| ||| |||| |||||||||| ||| ||||    
T  10474997 acactgaattatgtgattttctcaagttattagcggtgtcggcgtgtcaatgtc 10475050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 105 - 182
Target Start/End: Complemental strand, 16812581 - 16812504
Alignment:
Q  105 cactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||||||||| ||||| |||||||| ||   ||||||| || |||||||||||||| |||   ||||||||||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtcatgtttagtgtctgtatcc 16812504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 172
Target Start/End: Original strand, 22794093 - 22794166
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggt 172  Q
    ||||||||||| ||||||||||||| |||||||| || | |||| | ||| ||||||||  |||||| ||||||    
T  22794093 taattacactgtattatgtcattttttcaaattattatccgtgttgacgtgtcagtgtctatgtcgtatccggt 22794166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 75
Target Start/End: Complemental strand, 23622424 - 23622391
Alignment:
Q  42 atgaagcacggacacttctcggattaggcgtgtt 75  Q
    ||||||||| ||||||||||||||||||||||||    
T  23622424 atgaagcaccgacacttctcggattaggcgtgtt 23622391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 41597520 - 41597585
Alignment:
Q  134 tagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcatag 199  Q
    ||||||||| ||||| || |||||||||||||||  |||||| |||||| ||||  ||||||||||    
T  41597520 tagctgtgttggcgtgtcggtgtccgtgtcgtgtttggtgtccgtatccgtatccgtgcttcatag 41597585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 44482274 - 44482241
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatta 132  Q
    ||||||||||||||||||| ||||||||||||||    
T  44482274 taattacactgaattatgtgattttctcaaatta 44482241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 5944413 - 5944365
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||| ||||| |||||||||||||| | |||||||| ||||    
T  5944413 ctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggaca 5944365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 39 - 83
Target Start/End: Original strand, 7918153 - 7918197
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||||||||||||||||| ||||||||||| |||| | ||||||    
T  7918153 cctatgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 9828087 - 9828039
Alignment:
Q  100 aattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||||||||||||||| ||||| |||||||| |||  ||||||||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcgt 9828039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 16812675 - 16812635
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggt 80  Q
    |||||||||||||||||| ||| |||||||||||| |||||    
T  16812675 ctatgaagcacggacactcctcagattaggcgtgtcccggt 16812635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #118
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 196
Target Start/End: Original strand, 23531734 - 23531890
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctg 139  Q
    |||||||||||| ||||| ||| ||||| ||||||| | ||||| ||| |  ||| |  |||||||| |||||||||| || || |||||||| |||| |    
T  23531734 ctatgaagcacgaacactcctccgattaagcgtgtttcagtgtcggacgcgaacatttataattacattgaattatgtgatattttcaaattattagcag 23531833  T
Q  140 tgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttca 196  Q
    | | |  || || |||||||| |||||||| ||||| || ||| ||||  |||||||    
T  23531834 tattgaagtgtcggtgtccgtatcgtgtccagtgtccgtgtccgtatccgtgcttca 23531890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #119
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 32724113 - 32724177
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    |||||||| | |||||||| | |||||||||||| || |  ||||||||||||||||| ||||||    
T  32724113 taattacattaaattatgtaaatttctcaaattattaacgatgtcggcgtatcagtgttcgtgtc 32724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #120
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 32900010 - 32899962
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||| ||||| | ||||||||||| |||| |||||||||||||    
T  32900010 ctatgaagcaaggacaatcctcggattaggggtgtcccggtgtccgaca 32899962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #121
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 34741967 - 34741931
Alignment:
Q  38 ccctatgaagcacggacacttctcggattaggcgtgt 74  Q
    ||||||||||||||||||||  |||||||||||||||    
T  34741967 ccctatgaagcacggacactcttcggattaggcgtgt 34741931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #122
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 79 - 163
Target Start/End: Complemental strand, 52903313 - 52903229
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||| |||||   ||||||||||||||||| | ||||| | |||||| || | || ||||||| | ||||||||||||    
T  52903313 gtgtccgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

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Target: scaffold0018 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 175
Target Start/End: Original strand, 178819 - 178910
Alignment:
Q  85 gacactgacactcgtaattacactgaattatg-tcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||||||| ||||||||||||||||||| | ||||| |||||||| ||| ||||||||||| ||||||||||||||||||||||||||    
T  178819 gacactgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 178910  T

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Target: scaffold0018; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 192256 - 192333
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    |||||| |||||||||| ||||||||| |||||||||||||| || | |||||||||| ||||||||||| |||||||    
T  192256 gacacttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgtatcgtgtc 192333  T

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Target: scaffold0003 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 241653 - 241562
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| ||||||| |||||||||| |||||||| |||||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 241562  T

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Target: scaffold0003; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 40 - 89
Target Start/End: Complemental strand, 241724 - 241675
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 241675  T

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Target: scaffold0021 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 91 - 199
Target Start/End: Complemental strand, 130534 - 130426
Alignment:
Q  91 gacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctat 190  Q
    |||||| |||||||||||||||||||| ||||| ||||| || || |||||||||| | ||| |||||||||||||||||||||| || ||| |||| ||    
T  130534 gacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtcattgtccgtgtcgtgtccggtgtccgtgtccgtatccat 130435  T
Q  191 gcttcatag 199  Q
    |||||||||    
T  130434 gcttcatag 130426  T

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Target: scaffold0007 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 225283 - 225359
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||||| || |||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||    
T  225283 taattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtc 225359  T

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Target: scaffold0306 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 182
Target Start/End: Complemental strand, 13460 - 13361
Alignment:
Q  83 ccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||| ||| || |||||| ||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||| | ||||||||| ||||||    
T  13460 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatcc 13361  T

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Target: scaffold0152 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 83 - 182
Target Start/End: Original strand, 21867 - 21966
Alignment:
Q  83 ccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||||| ||| || |||||| ||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||| | ||||||||| ||||||    
T  21867 ccgacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccggtgtccgtatcc 21966  T

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Target: scaffold0004 (Bit Score: 53; Significance: 2e-21; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 92862 - 92790
Alignment:
Q  88 actgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    ||||||||| |||||||||||||||||||| |||||||||||||| |||| |||||||||| |||||||||||    
T  92862 actgacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgt 92790  T

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Target: scaffold0004; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 88
Target Start/End: Complemental strand, 92940 - 92893
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    ||||||||||||||||| |||||||||||||||| | |||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgaca 92893  T

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Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 123731 - 123612
Alignment:
Q  41 tatgaagcacggacacttctcggattaggcgtgttccggtgtcc-gacactgacactcgtaattacactgaattatgtca---ttttctcaaattactag 136  Q
    |||||||||  || ||| |||||||||||||||| | | |||   ||||| |||||| |||||||||||||||||||| |   |||| | |||||| |||    
T  123731 tatgaagcatagatactcctcggattaggcgtgtcctgatgttaagacaccgacacttgtaattacactgaattatgtgattctttttttaaattattag 123632  T
Q  137 ctgtgtcggcgtatcagtgt 156  Q
    |||||| ||||| |||||||    
T  123631 ctgtgttggcgtgtcagtgt 123612  T

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Target: scaffold0103 (Bit Score: 52; Significance: 9e-21; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 51862 - 51791
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

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Target: scaffold0049 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 63 - 172
Target Start/End: Complemental strand, 63853 - 63743
Alignment:
Q  63 gattaggcgtgttccggtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtg-tcggcgtatcagtgtccgtg 161  Q
    ||||||| ||||||||||||| ||||| |||||| |||||| ||||||||||||| |||||||||||||| |||| ||| | | ||| ||| ||||||||    
T  63853 gattaggtgtgttccggtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattagcggtgttagacgtgtcattgtccgtg 63754  T
Q  162 tcgtgtccggt 172  Q
    |||| ||||||    
T  63753 tcgtatccggt 63743  T

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Target: scaffold0049; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 132
Target Start/End: Complemental strand, 56981 - 56933
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaatta 132  Q
    |||||||||||||  | ||||||||||||||| ||||||||||||||||    
T  56981 cgacactgacacttatgattacactgaattatatcattttctcaaatta 56933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 84 - 168
Target Start/End: Original strand, 3849 - 3933
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtc 168  Q
    ||||||||||||| |||||||||||||||||||| ||||| | |||||| || | |||||||| |||||||||| ||||||||||    
T  3849 cgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtc 3933  T

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Target: scaffold0136; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 38 - 74
Target Start/End: Original strand, 3776 - 3812
Alignment:
Q  38 ccctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||| ||||||| ||||||||||||||||    
T  3776 ccctatgaagcaaggacactcctcggattaggcgtgt 3812  T

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Target: scaffold0722 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 79 - 160
Target Start/End: Original strand, 7027 - 7108
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgt 160  Q
    |||||||||||  ||||| ||||||| ||| |||||||| ||||| |||||||| ||||||||||| |||||||||||||||    
T  7027 gtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtccgt 7108  T

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Target: scaffold0008 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 84 - 188
Target Start/End: Original strand, 263372 - 263476
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcct 183  Q
    |||||||||||||  |||||||||||||||||||  ||||||||||||| |||| |||| | | | |||||||||||||||| ||| ||||| || |||     
T  263372 cgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtcgtatccagtgtccgtgtccg 263471  T
Q  184 tatct 188  Q
    |||||    
T  263472 tatct 263476  T

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Target: scaffold0246 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 170
Target Start/End: Complemental strand, 19626 - 19549
Alignment:
Q  92 acactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    ||||| |||||||||||||||||||| ||||| |||||||| ||| ||| ||||||| |||||||| ||||||||||||    
T  19626 acacttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 19549  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 157
Target Start/End: Complemental strand, 71784 - 71709
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtca--ttttctcaaattactagctgtgtcggcgtatcagtgtc 157  Q
    ||||||||||||| |||||||||||||||| ||| |  |||| |||||||| ||||||||||||||| ||||||||    
T  71784 cgacactgacactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtgtc 71709  T

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Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 71856 - 71806
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||| |||||| |||||||||| ||||| |||||||| |||||    
T  71856 cctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacac 71806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 182
Target Start/End: Original strand, 135263 - 135410
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc-----cgacactgacactcgtaattacactgaattatgtcattttctcaaattact 134  Q
    |||||||||||| ||||  ||| |||||||||||| | ||||||     |||||| |||||   ||||||||| ||||||||| |||||||||||||| |    
T  135263 ctatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattatt 135362  T
Q  135 agctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||| ||||||| || |  ||||| ||||||| | ||||||| ||||||    
T  135363 agcagtgtcggtgtgttggtgtctgtgtcgtattcggtgtccgtatcc 135410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 23479 - 23393
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||| ||||||  ||||||||||||||||||| ||||| |  | ||| || |||||||||||| |||||||| ||||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccg 23393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 23570 - 23483
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccg 170  Q
    |||||||||||||  ||||||||||||||||||| | |||| | || ||| || ||||||||| || |||||||  ||||||||||||    
T  23570 cgacactgacacttataattacactgaattatgtgattttttttaagttattaactgtgtcggtgtgtcagtgtatgtgtcgtgtccg 23483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 33377 - 33427
Alignment:
Q  98 gtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  33377 gtaattacactgaattatgttattttttcaaattattagctgtgtcggcgt 33427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 200
Target Start/End: Complemental strand, 9942 - 9841
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatccttatctatgcttcata 198  Q
    ||||||||||| ||| | | ||||||| |||  | ||||||||||||||| || |||||| |||||||||||||||| || ||| ||||  |||||||||    
T  9942 taattacactgcattttatgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccatgtcgtgtccggtgtccgtgtccgtatccgtgcttcata 9843  T
Q  199 gg 200  Q
    ||    
T  9842 gg 9841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 144
Target Start/End: Complemental strand, 70342 - 70277
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcg 144  Q
    ||||||||||| ||||||  ||||||||||||||||||| ||||| |||||||| || ||||||||    
T  70342 gtgtccgacaccgacacttataattacactgaattatgttattttttcaaattattaactgtgtcg 70277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 14580 - 14525
Alignment:
Q  93 cactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    |||| |||||||||||||||||||| ||||| |||||||| ||| |||||||||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgt 14525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 175
Target Start/End: Complemental strand, 8725 - 8634
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| ||||||  |||||| |||||| ||||| ||||||  |||||| |||  |||||| ||| ||||||||| ||||||||||||||||    
T  8725 cgacaccgacacttataattatactgaactatgtgattttcctaaattattagaagtgtcgacgtgtcagtgtccatgtcgtgtccggtgtc 8634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 148
Target Start/End: Complemental strand, 8073 - 8005
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||||||||| ||||||  ||||||||||| ||||| | ||||| |||||||| ||| |||||||||||    
T  8073 gtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgt 8005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 3058 - 3015
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtc 83  Q
    ||||| |||||||||||| |||||||||||||||||||||||||    
T  3058 ctatggagcacggacactcctcggattaggcgtgttccggtgtc 3015  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 53224 - 53153
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    ||||||||||||||||||| |||||||||||||| | || || ||||||| ||||    |||||||||||||||||    
T  53224 taattacactgaattatgtgattttctcaaattattggcggtatcggcgtgtcag----cgtgtcgtgtccggtgt 53153  T

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Target: scaffold0598 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 163
Target Start/End: Original strand, 8071 - 8132
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtc 163  Q
    ||||||||||||||||||||||||||||||| || | || ||| ||| || |||||||||||    
T  8071 ttacactgaattatgtcattttctcaaattattatccgtatcgacgtgtcggtgtccgtgtc 8132  T

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Target: scaffold0475 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 39 - 84
Target Start/End: Complemental strand, 3428 - 3383
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgttccggtgtcc 84  Q
    ||||||||||||||||||| |||||||||||||||| || ||||||    
T  3428 cctatgaagcacggacactcctcggattaggcgtgtcccagtgtcc 3383  T

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Target: scaffold1528 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 174
Target Start/End: Complemental strand, 1076 - 1004
Alignment:
Q  102 ttacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgt 174  Q
    |||||||||||||||| ||||| |||||||| |||| ||||||| || |||| ||| ||||||| | ||||||    
T  1076 ttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgt 1004  T

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Target: scaffold0793 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 4821 - 4869
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgaca 88  Q
    |||||||||||||||||| |||||||||||||||| || ||||| ||||    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

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Target: scaffold0793; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 182
Target Start/End: Original strand, 4891 - 4981
Alignment:
Q  92 acactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtctgtatcc 182  Q
    ||||| |||||||||||||||||||| | |||| | |||||| |||||||||||| || | || ||  ||||||||||| ||||||||||||    
T  4891 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttagagtatgtgtcgtgtcc-gtgtctgtatcc 4981  T

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Target: scaffold0168 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 21087 - 21011
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtccggtgtc 175  Q
    |||||| || || |||||| |||||||||||||| || | ||||| || | ||||||||||||||||||| ||||||    
T  21087 taattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtcgtgtctggtgtc 21011  T

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Target: scaffold0168; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 21150 - 21115
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgt 74  Q
    ||||||||||||||| ||||||||||||||||||||    
T  21150 cctatgaagcacggatacttctcggattaggcgtgt 21115  T

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Target: scaffold0168; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 39 - 74
Target Start/End: Complemental strand, 21408 - 21373
Alignment:
Q  39 cctatgaagcacggacacttctcggattaggcgtgt 74  Q
    |||||||||||| |||||||||||||||||||||||    
T  21408 cctatgaagcacagacacttctcggattaggcgtgt 21373  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 85 - 148
Target Start/End: Original strand, 17750 - 17813
Alignment:
Q  85 gacactgacactcgtaattacactgaattatgtcattttctcaaattactagctgtgtcggcgt 148  Q
    ||||| |||||| ||||||||||| |||||||| ||||| |||||||| ||| |||||| ||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgt 17813  T

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Target: scaffold0083 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 117
Target Start/End: Original strand, 45525 - 45563
Alignment:
Q  79 gtgtccgacactgacactcgtaattacactgaattatgt 117  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  45525 gtgtccgacaccgacacttgtaattacactgaattatgt 45563  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 90887 - 90817
Alignment:
Q  99 taattacactgaattatgtcattttctcaaattactagctgtgtcggcgtatcagtgtccgtgtcgtgtcc 169  Q
    ||||||||||||||||| | |||||||||||||| ||   |||| || || |||||||| |||||||||||    
T  90887 taattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtcc 90817  T

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Target: scaffold0450 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 8564 - 8613
Alignment:
Q  40 ctatgaagcacggacacttctcggattaggcgtgttccggtgtccgacac 89  Q
    |||||||||||||||||| |||| ||||||||||| || ||||| |||||    
T  8564 ctatgaagcacggacactcctcgaattaggcgtgtaccagtgtcggacac 8613  T

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Target: scaffold0123 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 44540 - 44572
Alignment:
Q  99 taattacactgaattatgtcattttctcaaatt 131  Q
    ||||||||||||||||||| |||||||||||||    
T  44540 taattacactgaattatgtgattttctcaaatt 44572  T

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Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 84 - 159
Target Start/End: Complemental strand, 23829 - 23753
Alignment:
Q  84 cgacactgacactcgtaattacactgaattatgtca-ttttctcaaattactagctgtgtcggcgtatcagtgtccg 159  Q
    |||||| |||||| |||||||||||||||||||| | |||| |||||||| || ||||| | | || ||||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgtccg 23753  T

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