View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF10005_high_6 (Length: 261)
Name: NF10005_high_6
Description: NF10005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10005_high_6 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0552 (1 HSPs) |
| | |
|
| [»] scaffold0373 (1 HSPs) |
| | |
|
| [»] scaffold0813 (1 HSPs) |
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| [»] scaffold0286 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 121; Significance: 4e-62; HSPs: 24)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 5433963 - 5433775
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||||| |
|
|
| T |
5433963 |
aatcttccaaatttatcagaagaatttcattgagatggccaatgctaggagaaatctcagaaagacttggacaatctgtgagtactaacttttcaagatt |
5433864 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaaca |
189 |
Q |
| |
|
|||||| |||||||||||||| |||||||| ||||||||| ||||||| || || ||||||||||| ||||||| ||||||||||||| |
|
|
| T |
5433863 |
aggcaaatttgaaaagtctggtgtttgtgtcagataatgacaatgactaaggttaagaattttcagcttctccattctctgcaagaaca |
5433775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 190
Target Start/End: Original strand, 5128570 - 5128759
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||| ||||||| ||||| |||||| | ||| ||||||||||||||| ||||||||||||| |
|
|
| T |
5128570 |
aatcttccaaatttatcagaagaattttattgagatgtccgatgctagtagaaacctcagacaacattgaacaatctttgagtactagcttttcaagatt |
5128669 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacat |
190 |
Q |
| |
|
||| || | ||||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||| ||||||| | ||||||||||||| |
|
|
| T |
5128670 |
aggtaaatatgaaaagtctggggtgtgtgtcagacaatgagaatgactatgattgagaattttcagcttctccatcatctgcaagaacat |
5128759 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 5284564 - 5284737
Alignment:
| Q |
23 |
aattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggg |
122 |
Q |
| |
|
|||||||||||||| |||||||||||| |||| |||||| || ||||||||||||||||| || ||||||||||||| ||||| ||| |||||||| ||| |
|
|
| T |
5284564 |
aattttattgagatttccaatgctaggtgaaacctcagatagccttggacaatctttgagcactagcttttcaagattaggcatgttcgaaaagtcaggg |
5284663 |
T |
|
| Q |
123 |
gtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
|| |||| |||||||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
5284664 |
cttcgtgtgagataatgggaatgactaagattgagaattttcagcttctccatcctctgcaagaacataaatat |
5284737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 5447515 - 5447322
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||| ||||||||||||| |
|
|
| T |
5447515 |
aatcttccaaatttatcagaagaattttattgagatgtccaatgctaggagaaacctcagacaacattggacaatctttgagtactagcttttcaagatt |
5447416 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaat |
194 |
Q |
| |
|
||||||| ||||||||| ||| | | ||| ||| |||||||||||| ||||||||| ||||||| || |||| |||||||||||||| |||| |
|
|
| T |
5447415 |
aggcaagcatgaaaagtccgggatgtttgtcagacgatgagaatgactaagattgagatttttcagattttccatcctctgcaagaacaaaaat |
5447322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 5096636 - 5096448
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||||||| |||||||||| | |||||| ||||||||||||||||| |||||| | ||||||||||||| ||||| ||||| ||||||| |
|
|
| T |
5096636 |
aatcttccaaatctattagaagaatttcactgagatttccaatgctaggagaaacctcagacaacattggacaatctttaagtaccagcttctcaagatt |
5096537 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaaca |
189 |
Q |
| |
|
||||| || ||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||||||||||| |||| |||||||||||||| |
|
|
| T |
5096536 |
aggcatgtatgaaaagtctggggtgtgtgtcagacaatgagaatgactaagatttagaattttcagtttttccatcctctgcaagaaca |
5096448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 5278494 - 5278299
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||| | ||||||||||||||||| ||||| |||||||||| |||||| |||| | | ||||| |||||| |||||| ||||||||||||| |
|
|
| T |
5278494 |
aatcttccaagtttatcagaagaattttatcgagatatccaatgctatgagaaacctcacacaaccttgggcaatctatgagtataagcttttcaagatt |
5278395 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
||||| |||||||||||||||||| | ||| ||||||||||||||||| ||||| ||||||||||| ||||||| |||||||||||||| |||||| |
|
|
| T |
5278394 |
aggcatgtttgaaaagtctggggtctctgtcagataatgagaatgactaagattaagaattttcagcttctccatcctctgcaagaacaaaaatat |
5278299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 5176667 - 5176472
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||| | ||||||||||||||||| |||||||||||||||| | |||| |||| | ||||| |||||| |||||| ||||||||||||| |
|
|
| T |
5176667 |
aatcttccaagtttatcagaagaattttatcgagatgtccaatgctatgggaaacctcacgcaaccttgggcaatctatgagtataagcttttcaagatt |
5176568 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
||||| |||||||||||||||||| | ||| ||||||||||||||||| ||||| ||||||||||| ||||||| |||||||||||||| |||||| |
|
|
| T |
5176567 |
aggcatgtttgaaaagtctggggtctctgtcagataatgagaatgactaagattaagaattttcagcttctccatcctctgcaagaacaaaaatat |
5176472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 5074061 - 5074241
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||| |||| ||| |||||| ||| || | |||||||||||| ||||||| || | |||||||| |
|
|
| T |
5074061 |
aatcttccaaatttatcagaagaattttattgagatgttcaatactatgagaaacctctgacaaccttggacaatctgtgagtactagttgttcaagatt |
5074160 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctg |
181 |
Q |
| |
|
||||||||||||||| ||||| ||||| || ||||||||||||||||| |||||||| |||||||| ||||||| |||||| |
|
|
| T |
5074161 |
aggcaagtttgaaaaatctggagtttgcgtcagataatgagaatgactaagattgagtattttcagcttctccaacctctg |
5074241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 9 - 196
Target Start/End: Original strand, 5354775 - 5354962
Alignment:
| Q |
9 |
aaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaagt |
108 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||||||||||||||||| ||||||||||||| ||||| || |
|
|
| T |
5354775 |
aaatttatcagaagaattttattgagatgtccaatgcttggagaaacttcagataacattggacaatctttgagtacaagcttttcaagattaggcatgt |
5354874 |
T |
|
| Q |
109 |
ttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
|||||||| ||||| ||||| ||| |||| |||||||| ||||||||||||||||| | ||||| ||||||||||||||| |||| |
|
|
| T |
5354875 |
aagaaaagtcaggggtatgtgtcagacaatgtgaatgactaagattgagaattttcagatgctccattctctgcaagaacatacatat |
5354962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 5690312 - 5690507
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||| | |||||||||||||||| | |||| |||| | ||||||||||||||||||| ||||||||||||| |
|
|
| T |
5690312 |
aatcttccaaatttatcagaagaattttgtcgagatgtccaatgctatgggaaacctcacgcaaccttggacaatctttgagtattagcttttcaagatt |
5690411 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
||||| | |||||||||||||||| ||||| ||||||||||| ||||| |||||||||||||| || ||||||| | ||| |||||| |||||||| |
|
|
| T |
5690412 |
aggcatgattgaaaagtctggggtctgtgtcagataatgagagtgactaagattgagaattttaagcttctccatcatctacaagaatataaatat |
5690507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 5157781 - 5157969
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||||||| |||||||||| | |||||| ||||||||||||||||| |||||| | ||||||||||||||||||| ||||| ||||||| |
|
|
| T |
5157781 |
aatcttccaaatctattagaagaatttcactgagatttccaatgctaggagaaacctcagacaacattggacaatctttgagtaccagcttctcaagatt |
5157880 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaaca |
189 |
Q |
| |
|
||||| || ||||||||||||||| || || ||| ||||||||||||| ||||| |||||||| || || |||| | |||||||||||| |
|
|
| T |
5157881 |
aggcatgtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaagatttagaatttttagcttttccatcatctgcaagaaca |
5157969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 5102767 - 5102955
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||||||| ||||| |||| | |||||| ||||||| ||||| ||| |||||| | ||||||||||||||||||| ||||| ||||||| |
|
|
| T |
5102767 |
aatcttccaaatctattagaagtatttcagtgagatctccaatggtaggacaaacctcagacaacattggacaatctttgagtaccagcttctcaagatt |
5102866 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaaca |
189 |
Q |
| |
|
|||||||| ||||||||| ||||| || || ||| ||||||||||||| ||||| ||||||||||| || |||| |||||||||||||| |
|
|
| T |
5102867 |
aggcaagtatgaaaagtcaggggtgtgcgtcagacaatgagaatgactaagatttagaattttcagcttttccaacctctgcaagaaca |
5102955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 3 - 194
Target Start/End: Complemental strand, 5344787 - 5344596
Alignment:
| Q |
3 |
tcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataag |
102 |
Q |
| |
|
|||||||||| || ||||||||||| ||||||| |||||||||| ||||||||||| | | |||||||||||| |||||| | ||||||||||| || |
|
|
| T |
5344787 |
tcttccaaattaatgagaagaattttcttgagatctccaatgctatgagaaatctcacacaaacttggacaatccacgagtactaacttttcaagattag |
5344688 |
T |
|
| Q |
103 |
gcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaat |
194 |
Q |
| |
|
| |||| |||||||| ||||||||| | || |||||||||||||| ||||||||||||||||| ||||||| | |||| |||||||||||| |
|
|
| T |
5344687 |
gtaagtaagaaaagtccggggtttgtatcaggtaatgagaatgactaagattgagaattttcagcttctccatcatctgtaagaacataaat |
5344596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 196
Target Start/End: Complemental strand, 5383252 - 5383059
Alignment:
| Q |
3 |
tcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataag |
102 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||| || | || ||||||||| |||||| ||||||||||||| || |
|
|
| T |
5383252 |
tcttccaaattaatcagaagaattttcttgagatctccaatgctaggagaaacctcggacaacctcggacaatctgcgagtactagcttttcaagattag |
5383153 |
T |
|
| Q |
103 |
gcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
|||| ||||| ||||||||||| || || |||||||||||||| || || || ||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
5383152 |
gcaaatttgagaagtctggggtctgcaccaggtaatgagaatgactaaggtttaggattttcagtatctccatcctctgcaagaacataaatat |
5383059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 5257487 - 5257682
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||| ||||| || |||||| ||||||| ||||||||| | ||||| | ||| || ||||||||||||||||||| | ||||||||||| |
|
|
| T |
5257487 |
aatcttccaaatttatcaaaacaattttcttgagatttccaatgcttgaagaaaccctagatagcattggacaatctttgagtactaacttttcaagatt |
5257586 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
||||| ||| |||||||| ||| || ||| ||| || | |||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |
|
|
| T |
5257587 |
aggcatgttggaaaagtcagggcttcttgtgagacaacgggaatgactaagattgagaattttcagcttctccatcctctgcaagaacataaatat |
5257682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 191
Target Start/End: Original strand, 5147049 - 5147239
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||| ||| |||||| ||||| | |||||||||| |||||| || | |||||||| |
|
|
| T |
5147049 |
aatcttccaaatttatcagaagaattttattgagatatccaatactatgagaaacttcagacaacattggacaatcagagagtactagttgttcaagatt |
5147148 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacata |
191 |
Q |
| |
|
|||||||||| |||||| |||||| ||||| | ||||||||| ||||| || ||||||||||| || ||||||| |||||||||||||||| |
|
|
| T |
5147149 |
aggcaagtttaaaaagtttggggtctgtgtcaaataatgagagtgactaagcttgagaatttttagcttctccatcctctgcaagaacata |
5147239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 67 - 196
Target Start/End: Complemental strand, 5396812 - 5396683
Alignment:
| Q |
67 |
ttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcag |
166 |
Q |
| |
|
|||||||||| ||| ||| || | |||||||| ||||| |||||||||||||||||| ||||| | ||||||||||||||| ||||||||||||||||| |
|
|
| T |
5396812 |
ttggacaatcagtgactactagttgttcaagattaggcatgtttgaaaagtctggggtctgtgtcaaataatgagaatgactaagattgagaattttcag |
5396713 |
T |
|
| Q |
167 |
tttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5396712 |
cttctccagcctctgcaagaacataaatat |
5396683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 3 - 198
Target Start/End: Complemental strand, 5447083 - 5446888
Alignment:
| Q |
3 |
tcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataag |
102 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||||| |||||||| |||| |||||| | ||| |||||||||||||| || |||| ||||| || |
|
|
| T |
5447083 |
tcttccaagtttatcagaagaattttattgagatgtctgatgctaggtgaaacctcagacaacagtgggcaatctttgagtactagtttttgaagattag |
5446984 |
T |
|
| Q |
103 |
gcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatatat |
198 |
Q |
| |
|
|| |||||||||||| ||| ||||||| ||||| || ||||| || |||||||||||||| || ||||||| |||||||||||||| ||| |||| |
|
|
| T |
5446983 |
gcgtgtttgaaaagtcagggctttgtgtgagatagtgcgaatggctaagattgagaatttttagcttctccatcctctgcaagaacaaaaaaatat |
5446888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 5182080 - 5182273
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagactt-ggacaatctttgagtacgagcttttcaagat |
99 |
Q |
| |
|
|||||||||||| ||||| ||| ||||||||||||| |||||| || | |||| ||||| | |||| ||||||||| ||||||| | || |||||| | |
|
|
| T |
5182080 |
aatcttccaaatttatcaaaagtattttattgagatctccaatactttgggaaacttcagaca-acttcggacaatctgtgagtactaactgttcaaggt |
5182178 |
T |
|
| Q |
100 |
aaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaat |
194 |
Q |
| |
|
||||||||||||||||||||| || | || ||| ||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||| |
|
|
| T |
5182179 |
taggcaagtttgaaaagtctggagtctttgacagaaaatgagaatgactaagattgagaattttcagcttctccagcctctgcaagaacagaaat |
5182273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 5370499 - 5370311
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
||||||| |||||||| |||||||||| ||||| |||||||||||||||| |||||| || ||| ||||||||||||||| | ||||||||| | |
|
|
| T |
5370499 |
aatcttcaaaatctattagaagaatttcgccgagattcccaatgctaggagaaacctcagacagcattgaacaatctttgagtactaacttttcaagctt |
5370400 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaaca |
189 |
Q |
| |
|
|||||||| ||||||||||||||| || || ||| ||||||||||||| ||||| |||||||| || || |||| | |||||||||||| |
|
|
| T |
5370399 |
aggcaagtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaagatttagaatttttagcttttccatcatctgcaagaaca |
5370311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5244020 - 5244182
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcaga-aagacttggacaatctttgagtacgagcttttcaagat |
99 |
Q |
| |
|
|||||||||||||||| |||||||||| | |||||| |||||||||||||||||||| || || ||| | ||||||||||||||| ||||||||||||| |
|
|
| T |
5244020 |
aatcttccaaatctattagaagaatttcactgagattcccaatgctaggagaaatctcggacaacact-gaacaatctttgagtactagcttttcaagat |
5244118 |
T |
|
| Q |
100 |
aaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaatttt |
163 |
Q |
| |
|
| || || ||||||||||||||| || || ||| ||||||||||||| ||||| |||||||| |
|
|
| T |
5244119 |
ttgacatgtatgaaaagtctggggtgtgcgtcagacaatgagaatgactaagatttagaatttt |
5244182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 5350322 - 5350159
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||| ||||||||||| |||||||||| | |||||| ||||||||||||||||| ||| || | ||||||||||||||||||| ||||||||||||| |
|
|
| T |
5350322 |
aatcctccaaatctattagaagaatttcactgagatctccaatgctaggagaaacctcggacaacattggacaatctttgagtactagcttttcaagatt |
5350223 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcag |
166 |
Q |
| |
|
||||| || ||||||||| |||| ||||| ||| || ||||||||| ||||| ||||||||||| |
|
|
| T |
5350222 |
aggcatgtatgaaaagtc--gggtgtgtgtcagacaacaagaatgactaagatttagaattttcag |
5350159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 5066847 - 5067035
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||||||| |||||||||| | |||| | ||| || ||||||||| ||| || | ||||||||||||||||||| ||||||||||||| |
|
|
| T |
5066847 |
aatcttccaaatctattagaagaatttcactgagttttcctattgtaggagaaacctcggacaatattggacaatctttgagtactagcttttcaagatt |
5066946 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaaca |
189 |
Q |
| |
|
||||| | ||||||||| ||||| || | ||| |||||||||| || ||||| ||||||||||| || |||| |||||||||||||| |
|
|
| T |
5066947 |
aggcatatatgaaaagtcaggggtgtgcatcagacaatgagaatggctaagatttagaattttcagcttttccatcctctgcaagaaca |
5067035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 189
Target Start/End: Complemental strand, 5425838 - 5425650
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
||||||| |||| ||| |||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||||| || ||||||||||||| |
|
|
| T |
5425838 |
aatcttctaaatttattagaagaatttctctgagatttccaatgctaggagaaatctcagacaacattggacaatctttgagcaccagcttttcaagatt |
5425739 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaaca |
189 |
Q |
| |
|
||||| | || |||||| ||||| | || ||| ||||||||||||| ||||| ||||||||||| || |||| || |||||| |||| |
|
|
| T |
5425738 |
aggcatgaatgtaaagtcaggggtgcgcgtcagacaatgagaatgactaagatttagaattttcagcttttccatccactgcaaaaaca |
5425650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 96; Significance: 4e-47; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 47987007 - 47987194
Alignment:
| Q |
3 |
tcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataag |
102 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||| |||| || |
|
|
| T |
47987007 |
tcttccaaatttatcagaagaattttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattag |
47987106 |
T |
|
| Q |
103 |
gcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacat |
190 |
Q |
| |
|
||| |||||||||||| || || |||| ||||||||||||||||| |||||||||||||| || || |||| | ||||||||||||| |
|
|
| T |
47987107 |
gcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaacat |
47987194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 47996294 - 47996481
Alignment:
| Q |
3 |
tcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataag |
102 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||| |||| || |
|
|
| T |
47996294 |
tcttccaaatttatcagaagaattttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattag |
47996393 |
T |
|
| Q |
103 |
gcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacat |
190 |
Q |
| |
|
||| |||||||||||| || || |||| ||||||||||||||||| |||||||||||||| || || |||| | ||||||||||||| |
|
|
| T |
47996394 |
gcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaacat |
47996481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 48005581 - 48005768
Alignment:
| Q |
3 |
tcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataag |
102 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||| |||| || |
|
|
| T |
48005581 |
tcttccaaatttatcagaagaattttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattag |
48005680 |
T |
|
| Q |
103 |
gcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacat |
190 |
Q |
| |
|
||| |||||||||||| || || |||| ||||||||||||||||| |||||||||||||| || || |||| | ||||||||||||| |
|
|
| T |
48005681 |
gcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaacat |
48005768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 3 - 190
Target Start/End: Original strand, 48014866 - 48015053
Alignment:
| Q |
3 |
tcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataag |
102 |
Q |
| |
|
|||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| | |||| |||||||||||||| |||||||| |||| || |
|
|
| T |
48014866 |
tcttccaaatttatcagaagaattttgtcgagatgtccaatgctaggagaaatctcagataacattgggcaatctttgagtactagcttttcgagattag |
48014965 |
T |
|
| Q |
103 |
gcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacat |
190 |
Q |
| |
|
||| |||||||||||| || || |||| ||||||||||||||||| |||||||||||||| || || |||| | ||||||||||||| |
|
|
| T |
48014966 |
gcatgtttgaaaagtcaaggcttcgtgtgagataatgagaatgactaagattgagaatttttagcttttccatcttctgcaagaacat |
48015053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 93; Significance: 2e-45; HSPs: 19)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 8 - 188
Target Start/End: Complemental strand, 4344567 - 4344387
Alignment:
| Q |
8 |
caaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaag |
107 |
Q |
| |
|
||||| ||||| ||||||||| |||||||||||||| || | ||||||||||| || |||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
4344567 |
caaatttatcaaaagaattttgttgagatgtccaatactttgggaaatctcagacagccttggacaatctttgagtactagcttttcaagattaggcaag |
4344468 |
T |
|
| Q |
108 |
tttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaac |
188 |
Q |
| |
|
| ||||||||| || || ||||| ||| ||||||||||||| ||||||||||||||||| | |||| ||||||||||||| |
|
|
| T |
4344467 |
tatgaaaagtcaggcgtctgtgtcagacaatgagaatgactgagattgagaattttcagctgatccatcctctgcaagaac |
4344387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 4361005 - 4360810
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||| ||||| ||||| ||||||||| |||||||||||||| || | ||||||||||| || |||||||||||||| ||||| ||||||||||||| |
|
|
| T |
4361005 |
aatctttcaaatttatcaaaagaattttcttgagatgtccaatactttgggaaatctcagacagccttggacaatctttaagtactagcttttcaagatt |
4360906 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
|||||||| ||||||||| || || ||||| ||||| ||||||||||| ||||||||||||||||| | ||||| || ||| || ||||||||||| |
|
|
| T |
4360905 |
aggcaagtatgaaaagtcaggcgtctgtgtcagatattgagaatgactaagattgagaattttcagctgctccatcccctgaaataacataaatat |
4360810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 4124092 - 4124287
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||| || ||||||||||| || | || | |||||| || |||||||||||||||||||| ||||||||||| | |
|
|
| T |
4124092 |
aatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagccttggacaatctttgagtaccagcttttcaaggtt |
4124191 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
|||||||| ||||||||| ||||| ||||| ||||||||||||||||| ||||||||||||||||| | ||||| ||||||||||||| |||||| |
|
|
| T |
4124192 |
aggcaagtatgaaaagtcaggggtctgtgtcagataatgagaatgactaagattgagaattttcagctgctccattctctgcaagaacagaaatat |
4124287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 4335273 - 4335087
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||| ||||| ||||| ||||| ||| || ||||||||||| || | || | |||||| || || ||||||||||||||||| || |||||||||| |
|
|
| T |
4335273 |
aatctttcaaatttatcaaaagaactttcttaagatgtccaattgtatgggatacctcagacagcctcggacaatctttgagtactaggttttcaagatt |
4335174 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaa |
187 |
Q |
| |
|
|||||||| |||||| || ||||| ||||||||||||||||||||||| |||||||||||||||| | ||||| |||||||||||| |
|
|
| T |
4335173 |
aggcaagtatgaaaaatcaggggtctgtgttagataatgagaatgactaagattgagaattttcaactgctccatcctctgcaagaa |
4335087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 194
Target Start/End: Original strand, 4133596 - 4133769
Alignment:
| Q |
21 |
agaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctg |
120 |
Q |
| |
|
|||| ||||| |||||| |||||| || | |||| |||||| || ||||||||||||||||||| || ||||| |||| ||||| || |||||| |||| |
|
|
| T |
4133596 |
agaactttatggagatgaccaatggtatgggaaacctcagacagccttggacaatctttgagtattagtttttctagattaggcatgtgtgaaaaatctg |
4133695 |
T |
|
| Q |
121 |
gggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaat |
194 |
Q |
| |
|
|||| ||| |||| ||||||||||||| |||||||||| ||| || |||||||||||||||||||||| |||| |
|
|
| T |
4133696 |
gggtctgtactagacaatgagaatgactaagattgagaaattttagattctccagcctctgcaagaacaaaaat |
4133769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 184
Target Start/End: Original strand, 4320772 - 4320955
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||| ||||| ||||| || || ||| |||||||||||||||||| | |||| || ||| || ||||| ||||||| ||| || ||||||||||||| |
|
|
| T |
4320772 |
aatctttcaaatttatcaaaacaacttttttgagatgtccaatgctatgggaaacctgagacagccttgggcaatcttcgagcactagcttttcaagatt |
4320871 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaa |
184 |
Q |
| |
|
|||||||| ||||||||| ||||| ||||| | || |||||||||||| ||||| ||||| ||||| | ||||| ||||||||| |
|
|
| T |
4320872 |
aggcaagtatgaaaagtcaggggtctgtgtcaaatgatgagaatgactaagatttagaatcttcagctgctccatcctctgcaa |
4320955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 65 - 184
Target Start/End: Complemental strand, 6772968 - 6772849
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttc |
164 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||||||||| || | || ||| |||||||| ||||| |||||||| |
|
|
| T |
6772968 |
acttggacaattcttgagtactagcttttcaagattcggcaagtatgaaaagtctggggtttcggtcaaatcatgggaatgactaagattaagaattttt |
6772869 |
T |
|
| Q |
165 |
agtttctccagcctctgcaa |
184 |
Q |
| |
|
|| ||||| ||| ||||||| |
|
|
| T |
6772868 |
agattctctagcatctgcaa |
6772849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 172
Target Start/End: Complemental strand, 6815334 - 6815227
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttc |
164 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||| ||||||| || |||||||||||||| || | || |||||||||||||||| |||||||| |
|
|
| T |
6815334 |
acttggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggtttcagtcaaatctggagaatgacttagattaagaattttt |
6815235 |
T |
|
| Q |
165 |
agtttctc |
172 |
Q |
| |
|
|| ||||| |
|
|
| T |
6815234 |
agattctc |
6815227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 65 - 187
Target Start/End: Original strand, 6498743 - 6498865
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttc |
164 |
Q |
| |
|
||||||||| ||||||||||| |||||||||| || |||||||| | |||||||||||||| | | || ||||||||||| ||||| |||||||| |
|
|
| T |
6498743 |
acttggacagtctttgagtactagcttttcaatattaggcaagtacgtaaagtctggggtttcaatcaaattctgagaatgactaagattaagaatttta |
6498842 |
T |
|
| Q |
165 |
agtttctccagcctctgcaagaa |
187 |
Q |
| |
|
|| ||||| ||| |||||||||| |
|
|
| T |
6498843 |
agattctctagcatctgcaagaa |
6498865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 193
Target Start/End: Complemental strand, 6758588 - 6758460
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttc |
164 |
Q |
| |
|
||||||||| | |||||| || ||||||||||||| ||| |||| |||||||||||| ||| || | || |||||||||| ||||| ||||||||| |
|
|
| T |
6758588 |
acttggacagtttttgagcaccagcttttcaagattaggaaagtaggaaaagtctgggcttttagtcaaatccagagaatgactaagattaagaattttc |
6758489 |
T |
|
| Q |
165 |
agtttctccagcctctgcaagaacataaa |
193 |
Q |
| |
|
|| ||||| ||| |||||||||| ||||| |
|
|
| T |
6758488 |
agattctctagcttctgcaagaaaataaa |
6758460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 6837194 - 6837010
Alignment:
| Q |
9 |
aaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaagt |
108 |
Q |
| |
|
|||| ||||||||||| ||||| |||| |||||||||| | || | | |||| | ||||||||| ||||||||||| ||||||||||||| |||| | |
|
|
| T |
6837194 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
6837095 |
T |
|
| Q |
109 |
ttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaa |
193 |
Q |
| |
|
||| |||||||| |||| || | || ||||||||||| ||||| |||||||| | |||| ||| |||||||||| ||||| |
|
|
| T |
6837094 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttttaagttctttagcatctgcaagaaaataaa |
6837010 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 6752824 - 6752726
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaatttt |
163 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||| ||||| | |||||||||||| |||| || | || ||||||||||| ||||| |||||||| |
|
|
| T |
6752824 |
acttggacagtctttgagtacaagcttttcaagattaggcatatatgaaaagtctggagtttcggtcaaatcctgagaatgactaagattaagaatttt |
6752726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 193
Target Start/End: Complemental strand, 6715688 - 6715503
Alignment:
| Q |
8 |
caaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaag |
107 |
Q |
| |
|
||||| ||||||||||||||||| ||| |||||||||| | || | | ||| | ||||||||| |||| ||||| ||||||||||||| |||| | |
|
|
| T |
6715688 |
caaatttatcagaagaattttatgcagagatccaatgctatgggagaccgtagacaaacttggacagtcttcgagtataagcttttcaagatttggcatg |
6715589 |
T |
|
| Q |
108 |
tttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaa |
193 |
Q |
| |
|
| |||||||||||| |||| || | || | ||||||| || ||||| |||| ||| || ||||| ||| |||||||||| ||||| |
|
|
| T |
6715588 |
tatgaaaagtctggtgtttcagtcaaatcaagagaatggctgagattaagaacttttagattctctagcatctgcaagaaaataaa |
6715503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 6650930 - 6650870
Alignment:
| Q |
66 |
cttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggttt |
126 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
6650930 |
cttggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggttt |
6650870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 172
Target Start/End: Complemental strand, 6675567 - 6675460
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttc |
164 |
Q |
| |
|
||||||||| |||||||| || |||||||||| || ||||||| ||||||||||||||||| | | || ||||||||||| ||||| |||||||| |
|
|
| T |
6675567 |
acttggacagtctttgagcaccagcttttcaatattgggcaagtatgaaaagtctggggtttcagccaaattttgagaatgactaagattaagaattttt |
6675468 |
T |
|
| Q |
165 |
agtttctc |
172 |
Q |
| |
|
|| ||||| |
|
|
| T |
6675467 |
agattctc |
6675460 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 6532392 - 6532510
Alignment:
| Q |
8 |
caaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaag |
107 |
Q |
| |
|
||||| ||||||||||| ||| | |||| |||||||||| | || | | |||| | ||||||||| ||||||||||| | ||||||||||| ||||| |
|
|
| T |
6532392 |
caaatttatcagaagaagtttttggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactaacttttcaagattaggcata |
6532491 |
T |
|
| Q |
108 |
tttgaaaagtctggggttt |
126 |
Q |
| |
|
| |||||||| |||||||| |
|
|
| T |
6532492 |
tatgaaaagtttggggttt |
6532510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 6728270 - 6728172
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaatttt |
163 |
Q |
| |
|
||||||||| | |||||| |||||||||||||||| ||| |||| |||||||||||||||| || | || |||||||||| ||||| |||||||| |
|
|
| T |
6728270 |
acttggacagtttttgagcacgagcttttcaagattaggtaagtaggaaaagtctggggtttcagtcaaatccagagaatgactaagattaagaatttt |
6728172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 6796708 - 6796590
Alignment:
| Q |
8 |
caaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaag |
107 |
Q |
| |
|
||||| ||| ||||||||||||| ||| |||||||||| | || | | ||| | ||||||||||| ||| ||||| ||||||||||||| || ||| |
|
|
| T |
6796708 |
caaatttatgagaagaattttatgtagagatccaatgctatgggagaccgtagacaaacttggacaattttttagtactagcttttcaagatttggtaag |
6796609 |
T |
|
| Q |
108 |
tttgaaaagtctggggttt |
126 |
Q |
| |
|
| || |||||||||||||| |
|
|
| T |
6796608 |
tatgtaaagtctggggttt |
6796590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 6545665 - 6545726
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggttt |
126 |
Q |
| |
|
||||||||| |||||||||| | ||||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
6545665 |
acttggacagcctttgagtactatcttttcaagattaggcatatatgaaaagtctggggttt |
6545726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 194
Target Start/End: Original strand, 36213982 - 36214175
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||| ||| ||||||| |||||||||||||||||| || | |||| |||||| | |||||||||||| ||||||| || |||||||| | |
|
|
| T |
36213982 |
aatcttccaaatttattagaagaactttattgagatgtccaatactgtgggaaacctcagacaatcttggacaatctgtgagtactagtttttcaaggtt |
36214081 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaat |
194 |
Q |
| |
|
||||| ||||||||| ||||| || | ||| ||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||| |||| |
|
|
| T |
36214082 |
aggcatgtttgaaaaatctggagtctttgtcagataatgagaatgactaagattgagaattttcagcttttccagcctctgcaagaacagaaat |
36214175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 159
Target Start/End: Complemental strand, 18935312 - 18935156
Alignment:
| Q |
3 |
tcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataag |
102 |
Q |
| |
|
|||| ||||| ||| | ||||||||| |||||| |||| || ||| |||||| | || | |||||| ||||||||||||| | ||||||||||| | |
|
|
| T |
18935312 |
tctttcaaatttattaaaagaattttcttgagaagtcctatactatgagaaaccgaggacaaacttgggcaatctttgagtattaacttttcaagattcg |
18935213 |
T |
|
| Q |
103 |
gcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaa |
159 |
Q |
| |
|
||||||||||||||| ||||||||| | || | |||||||||||| ||||| |||| |
|
|
| T |
18935212 |
gcaagtttgaaaagttcggggtttgtctcaggttatgagaatgactaagattaagaa |
18935156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 67 - 166
Target Start/End: Original strand, 34724805 - 34724904
Alignment:
| Q |
67 |
ttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcag |
166 |
Q |
| |
|
|||||||||||||||||| | ||||||||||| ||||||| |||||||||||| |||||| | | | |||||||||||| ||||| |||| |||||| |
|
|
| T |
34724805 |
ttggacaatctttgagtattaacttttcaagatttggcaagtatgaaaagtctggtgtttgtttcaagttatgagaatgactaagattaagaaatttcag |
34724904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 9053 - 9248
Alignment:
| Q |
1 |
aatcttccaaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagata |
100 |
Q |
| |
|
|||||||||||||||| ||||| |||| | ||||| ||||||| || |||||| ||| | | ||||||||||||||||||| ||||||||||||| |
|
|
| T |
9053 |
aatcttccaaatctattagaagtatttcaccgagatctccaatggtatgagaaacctcggtcaacattggacaatctttgagtactagcttttcaagatt |
9152 |
T |
|
| Q |
101 |
aggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaatat |
196 |
Q |
| |
|
|||||| | ||||||||||||||| || | | ||||||||||||||| ||||||||||||||||| ||| ||||||||||||||| ||||||||| |
|
|
| T |
9153 |
aggcaaatatgaaaagtctggggtatgcatcaaataatgagaatgactaagattgagaattttcagcttcgccagcctctgcaagaccataaatat |
9248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 69 - 194
Target Start/End: Complemental strand, 8877469 - 8877344
Alignment:
| Q |
69 |
ggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtt |
168 |
Q |
| |
|
||||||||||||||||| ||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||| || || |||||||||||||| || | |
|
|
| T |
8877469 |
ggacaatctttgagtactagcttttcaagattaggcaagtttaaaaagtctggagtttgtgtcagatgatgagagtggctaagattgagaatttttagct |
8877370 |
T |
|
| Q |
169 |
tctccagcctctgcaagaacataaat |
194 |
Q |
| |
|
|||||| ||||||||||||||||||| |
|
|
| T |
8877369 |
tctccatcctctgcaagaacataaat |
8877344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0552 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0552
Description:
Target: scaffold0552; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 172
Target Start/End: Original strand, 8502 - 8609
Alignment:
| Q |
65 |
acttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttc |
164 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||||| ||||||| || |||||||||||||| || | || |||||||||||||||| |||||||| |
|
|
| T |
8502 |
acttggacaatttttgagtactagcttttcaagatttggcaagtatgtaaagtctggggtttcagtcaaatctggagaatgacttagattaagaattttt |
8601 |
T |
|
| Q |
165 |
agtttctc |
172 |
Q |
| |
|
|| ||||| |
|
|
| T |
8602 |
agattctc |
8609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0373 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0373
Description:
Target: scaffold0373; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 193
Target Start/End: Complemental strand, 9610 - 9426
Alignment:
| Q |
9 |
aaatctatcagaagaattttattgagatgtccaatgctaggagaaatctcagaaagacttggacaatctttgagtacgagcttttcaagataaggcaagt |
108 |
Q |
| |
|
|||| ||||||||||| ||||| |||| |||||||||| | || | | |||| | ||||||||| ||||||||||| ||||||||||||| |||| | |
|
|
| T |
9610 |
aaatttatcagaagaagtttatggagagatccaatgctatgggagaccgcagacaaacttggacagtctttgagtactagcttttcaagattcggcatat |
9511 |
T |
|
| Q |
109 |
ttgaaaagtctggggtttgtgttagataatgagaatgacttagattgagaattttcagtttctccagcctctgcaagaacataaa |
193 |
Q |
| |
|
||| |||||||| |||| || | || ||||||||||| ||||| |||||||| | |||| ||| |||||||||| ||||| |
|
|
| T |
9510 |
atgagaagtctggagtttcagtcaaatcctgagaatgactaagattaagaatttttaagttctttagcatctgcaagaaaataaa |
9426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0813 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0813
Description:
Target: scaffold0813; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 5044 - 5104
Alignment:
| Q |
66 |
cttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggttt |
126 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
5044 |
cttggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggttt |
5104 |
T |
|
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Target: scaffold0286 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 126
Target Start/End: Complemental strand, 6522 - 6462
Alignment:
| Q |
66 |
cttggacaatctttgagtacgagcttttcaagataaggcaagtttgaaaagtctggggttt |
126 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||| ||||| | ||||||||||||||||| |
|
|
| T |
6522 |
cttggacagtctttgagtactagcttttcaagattaggcatgaatgaaaagtctggggttt |
6462 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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