View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10008_5 (Length: 325)
Name: NF10008_5
Description: NF10008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10008_5 |
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Alignment Details
Target: chr5 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 20 - 314
Target Start/End: Complemental strand, 40646172 - 40645878
Alignment:
| Q |
20 |
gttctttgaccaaggttttgtacttgttcattatggtggagttggatgttttaaaactctaaattgattgttacatgataatttatatggttttattgga |
119 |
Q |
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| T |
40646172 |
gttctttgaccaaggttttgtaattgttcattatggtggagttggatgttttaaaactctaaattgattgttacatgatagtttatatggttttattgga |
40646073 |
T |
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| Q |
120 |
ttatttcagtctgagcaaattaagttctacacaatgagtatactgaggcctgaagatgagtcaactcatatcgaagatattgnnnnnnnatataggtatc |
219 |
Q |
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| T |
40646072 |
ttatttcagtctgagcaaattaagttctacacaatgagtatactgaggcctgaagacgattcaactcatatcgaagatattgtttttttatataggtatc |
40645973 |
T |
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| Q |
220 |
tttttgttgattctgcaatgtagtatgctaggaatcatatttacctcataagggcatctgatgacagtgaatttgatagaaacctattgccctat |
314 |
Q |
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| T |
40645972 |
tttttgttgattctgcaatgtagtatgctaggaatcatatttacctcataagggcatctgatgacagtgaatttgatagaaacctattgccctat |
40645878 |
T |
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