View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10008_7 (Length: 306)
Name: NF10008_7
Description: NF10008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10008_7 |
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Alignment Details
Target: chr5 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 23 - 304
Target Start/End: Complemental strand, 29303072 - 29302791
Alignment:
| Q |
23 |
tcattagtgatttttcttaagccatgtatgattagtgatagtagaaatacttttagcaaattttttccagagaatatcacttgcatcttttgttccctaa |
122 |
Q |
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| T |
29303072 |
tcattagtgatttttcttaagccatgtatgattagtgatagtagaaatacttttagcaaattttttccagagaatatcacttgcatcttttgttccctaa |
29302973 |
T |
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| Q |
123 |
attatcatgattttcttagaagacagattctgtaaatacagctatctaggaattgcatttgaagtttgtgtcattgacaaagaattttaatacaatatag |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29302972 |
attatcatgattttcttagaagacagattctgtaaatacagctatctaggaattgcatttgaagtttgtgtcattgacaaagaattttaatacaatatag |
29302873 |
T |
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| Q |
223 |
tgtacaccacggcacaaaatacactgatcaataatcatagtttaacacttaattaatcacatcataatgtgtctatgagatt |
304 |
Q |
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| T |
29302872 |
tttacaccacggcacaaaatacactgatcaataatcatagtttaacacttaattaatcacatcataatgtgtctatgagatt |
29302791 |
T |
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