View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10008_low_1 (Length: 331)
Name: NF10008_low_1
Description: NF10008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10008_low_1 |
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Alignment Details
Target: chr7 (Bit Score: 286; Significance: 1e-160; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 286; E-Value: 1e-160
Query Start/End: Original strand, 18 - 323
Target Start/End: Complemental strand, 22760286 - 22759981
Alignment:
| Q |
18 |
agaggttactccaaatgcatttgctgaatactcagataccttatgagtgttcgtgcgaggatcattaagatcaatcccgaataatctacagcttgtagca |
117 |
Q |
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| T |
22760286 |
agaggtgactccaaatgcatttgctgaatactcagataccttatgagtgttcgtgcgaggatcattaagatcaatcccgaataatctacagcttgtagca |
22760187 |
T |
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| Q |
118 |
gcctctttttggttatccttgacaacttggtcaatcatatgattattgttgttcaatatttctgagtgagtttttgaaataggccaagctgagactgcga |
217 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22760186 |
gcctcttttttgttatccttgacaacttggtcaatcatatgatcattgttgttcaatatttctgagtgagtttttgaaataggccaagctgagactgcga |
22760087 |
T |
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| Q |
218 |
cactcttgctatcgtcaatcgcgtcttgacacaaatgagaaggaccacttgaatgaggagaagatagccaacttccgtcagtcggattcctcgatatacc |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
22760086 |
cactcttgctatcgtcaatcgcgtcttgacacaaatgagaaggaccacttgaatgaggagaagatagccaacttccgtcagtcggattccttgatatacc |
22759987 |
T |
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| Q |
318 |
tttgct |
323 |
Q |
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||||| |
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| T |
22759986 |
attgct |
22759981 |
T |
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