View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10009_high_3 (Length: 232)
Name: NF10009_high_3
Description: NF10009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10009_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 2e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 2e-97
Query Start/End: Original strand, 20 - 219
Target Start/End: Complemental strand, 3472929 - 3472730
Alignment:
| Q |
20 |
tctctctcttctcaaaacactaccatccactctacgttgcgtaacttcaccaaattcacatgcaaaatcaaactcatcttcatttcatttccatcatctt |
119 |
Q |
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| T |
3472929 |
tctctctcttcccaaaacactacaatccactctacgttgcgtaacttcaccaaattcacatgcaaaatcaaactcatcttcatttcatttttatcatctt |
3472830 |
T |
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| Q |
120 |
atacacatttatatttttactctttcttcattttccaacacttacaaaccatgtgctcttcactgtcacatattaaccctaccctctcactctccctttg |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
3472829 |
atacacatttatatttttactctttcttcattttccaacacttacaaaccatgtgctcttcactgtcacatattaaccctaccctctcactctctctttg |
3472730 |
T |
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