View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10009_low_18 (Length: 225)
Name: NF10009_low_18
Description: NF10009
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10009_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 164; Significance: 8e-88; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 32810908 - 32811104
Alignment:
| Q |
1 |
aaaatggtaaaggtcttctgatcaacataaaaggtcaattcatcnnnnnnnttgtaagaattgaaatttaaatatttcagtcgtagttatgtgatcagcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
32810908 |
aaaatggtaaaggtcttctgatcaacataaaaggtcaattcatcaaaaaaattgtaagaattgaaatttaaatatttcattcgtagttatgtgatcagcc |
32811007 |
T |
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| Q |
101 |
aaccctcaaatacaaagattaatgtcaaagaaaatgacaggaaaataaatgtgtgtgtccaactatgtagcacggacacttgcaagtaaaggtgtgt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
32811008 |
aaccctcaaatacaaagattaatgtcaaagaaaatgacaggaaaatgaatgtgtgtgtccaactatgtagcacggacacttgcgagtaaaggtgtgt |
32811104 |
T |
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