View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1001-INSERTION2 (Length: 115)
Name: NF1001-INSERTION2
Description: NF1001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1001-INSERTION2 |
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Alignment Details
Target: chr4 (Bit Score: 87; Significance: 3e-42; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 87; E-Value: 3e-42
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 30781345 - 30781243
Alignment:
| Q |
8 |
gaatatattctgtcatatgcacatttcagatctacataacaacgtgatatttgcctgtattcgtaattaagaatatattttcctc-aaaacaagctaatt |
106 |
Q |
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| T |
30781345 |
gaatatattctgtcatatgcacatttcagatctacataacaacgtgatatttgcctgtattcgtaattaataatatattttcctcgaaaacaacctaatt |
30781246 |
T |
|
| Q |
107 |
cag |
109 |
Q |
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||| |
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| T |
30781245 |
cag |
30781243 |
T |
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