View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1001-INSERTION7 (Length: 707)

Name: NF1001-INSERTION7
Description: NF1001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1001-INSERTION7
NF1001-INSERTION7
[»] chr4 (29 HSPs)
chr4 (192-362)||(24682164-24682334)
chr4 (508-649)||(24682478-24682619)
chr4 (6-122)||(24681978-24682094)
chr4 (413-459)||(24682385-24682431)
chr4 (413-459)||(37378681-37378727)
chr4 (413-459)||(5473882-5473928)
chr4 (413-459)||(19680482-19680528)
chr4 (413-459)||(19839212-19839258)
chr4 (413-459)||(22156659-22156705)
chr4 (413-459)||(27040083-27040129)
chr4 (413-459)||(29625358-29625404)
chr4 (413-459)||(30508020-30508066)
chr4 (413-459)||(46286287-46286333)
chr4 (413-459)||(55309271-55309317)
chr4 (413-457)||(9670537-9670581)
chr4 (413-459)||(2275736-2275782)
chr4 (413-459)||(5399642-5399688)
chr4 (413-459)||(9059010-9059056)
chr4 (413-459)||(13028874-13028920)
chr4 (413-459)||(14944779-14944825)
chr4 (413-459)||(18051872-18051918)
chr4 (413-459)||(18714935-18714981)
chr4 (413-459)||(22128370-22128416)
chr4 (413-459)||(25147754-25147800)
chr4 (413-459)||(32175795-32175841)
chr4 (410-459)||(12071995-12072044)
chr4 (417-457)||(22168303-22168343)
chr4 (411-455)||(34557220-34557264)
chr4 (415-459)||(38223543-38223587)
[»] chr7 (32 HSPs)
chr7 (304-346)||(44487767-44487809)
chr7 (413-457)||(48933173-48933217)
chr7 (413-459)||(2650886-2650932)
chr7 (413-459)||(10050894-10050940)
chr7 (413-459)||(11036542-11036588)
chr7 (413-459)||(20174055-20174101)
chr7 (413-459)||(21917392-21917438)
chr7 (413-459)||(22486429-22486475)
chr7 (413-459)||(23699883-23699929)
chr7 (413-459)||(36636541-36636587)
chr7 (413-459)||(38057667-38057713)
chr7 (413-459)||(816249-816295)
chr7 (413-451)||(1842937-1842975)
chr7 (413-459)||(7733370-7733416)
chr7 (413-459)||(15014463-15014509)
chr7 (413-459)||(18217864-18217910)
chr7 (413-459)||(20429500-20429546)
chr7 (413-459)||(23539267-23539313)
chr7 (413-451)||(23577247-23577285)
chr7 (413-459)||(23750794-23750840)
chr7 (413-459)||(26577300-26577346)
chr7 (413-459)||(27806053-27806099)
chr7 (413-459)||(28800913-28800959)
chr7 (413-459)||(31042286-31042332)
chr7 (413-459)||(31425569-31425615)
chr7 (417-459)||(37135347-37135389)
chr7 (413-459)||(39979682-39979728)
chr7 (413-459)||(40847493-40847539)
chr7 (413-459)||(45664803-45664849)
chr7 (413-459)||(47523708-47523754)
chr7 (414-459)||(27304905-27304950)
chr7 (413-457)||(1824258-1824302)
[»] chr6 (27 HSPs)
chr6 (413-459)||(27705457-27705503)
chr6 (413-456)||(13145040-13145083)
chr6 (413-459)||(2992650-2992696)
chr6 (413-459)||(9892998-9893044)
chr6 (413-459)||(18033583-18033629)
chr6 (413-451)||(18492412-18492450)
chr6 (413-459)||(22579407-22579453)
chr6 (413-459)||(25398037-25398083)
chr6 (413-457)||(2669346-2669390)
chr6 (413-457)||(6978314-6978358)
chr6 (413-456)||(495685-495728)
chr6 (413-456)||(11049809-11049852)
chr6 (416-459)||(21140974-21141017)
chr6 (413-459)||(6598499-6598545)
chr6 (413-459)||(11077684-11077730)
chr6 (413-459)||(12951743-12951789)
chr6 (413-451)||(15364516-15364554)
chr6 (413-459)||(15509191-15509237)
chr6 (417-459)||(17919571-17919613)
chr6 (413-459)||(20182180-20182226)
chr6 (413-459)||(22083873-22083919)
chr6 (413-459)||(22153765-22153811)
chr6 (413-459)||(23281821-23281867)
chr6 (413-459)||(26939622-26939668)
chr6 (413-459)||(28364946-28364992)
chr6 (413-457)||(19175835-19175879)
chr6 (413-457)||(33250766-33250810)
[»] chr5 (30 HSPs)
chr5 (413-459)||(28265533-28265579)
chr5 (413-459)||(618329-618375)
chr5 (413-459)||(746926-746972)
chr5 (413-459)||(8886909-8886955)
chr5 (413-459)||(10494772-10494818)
chr5 (413-459)||(15061008-15061054)
chr5 (413-459)||(17039689-17039735)
chr5 (413-459)||(23975670-23975716)
chr5 (413-459)||(33818619-33818665)
chr5 (413-459)||(36196429-36196475)
chr5 (417-458)||(33735035-33735076)
chr5 (413-457)||(8108918-8108962)
chr5 (413-457)||(26708643-26708687)
chr5 (413-457)||(26978377-26978421)
chr5 (413-456)||(4125246-4125289)
chr5 (413-456)||(7003788-7003831)
chr5 (413-459)||(2472772-2472818)
chr5 (413-459)||(5982680-5982726)
chr5 (413-459)||(16121897-16121943)
chr5 (413-459)||(16631932-16631978)
chr5 (413-459)||(17036470-17036516)
chr5 (413-459)||(23423814-23423860)
chr5 (413-459)||(25397846-25397892)
chr5 (413-451)||(33816816-33816854)
chr5 (413-451)||(35620401-35620439)
chr5 (413-459)||(38837729-38837775)
chr5 (417-459)||(40484079-40484121)
chr5 (410-451)||(17986772-17986813)
chr5 (415-456)||(32726786-32726827)
chr5 (415-459)||(17079440-17079484)
[»] chr3 (39 HSPs)
chr3 (413-459)||(17582359-17582405)
chr3 (413-459)||(18104588-18104634)
chr3 (413-459)||(19269922-19269968)
chr3 (413-459)||(1311017-1311063)
chr3 (413-459)||(5260968-5261014)
chr3 (413-459)||(8546276-8546322)
chr3 (413-459)||(13921356-13921402)
chr3 (413-459)||(16299892-16299938)
chr3 (413-459)||(19545541-19545587)
chr3 (413-459)||(19610369-19610415)
chr3 (413-459)||(23773508-23773554)
chr3 (413-459)||(26098844-26098890)
chr3 (413-459)||(26830500-26830546)
chr3 (413-451)||(29956411-29956449)
chr3 (413-451)||(30005566-30005604)
chr3 (413-459)||(48404891-48404937)
chr3 (413-457)||(21816754-21816798)
chr3 (413-456)||(1745545-1745588)
chr3 (413-456)||(15064050-15064093)
chr3 (413-459)||(4393408-4393454)
chr3 (413-451)||(6718749-6718787)
chr3 (413-459)||(9652609-9652655)
chr3 (413-459)||(10941723-10941769)
chr3 (413-459)||(11007741-11007787)
chr3 (413-459)||(11219169-11219215)
chr3 (413-459)||(13905096-13905142)
chr3 (417-459)||(18539835-18539877)
chr3 (413-459)||(19223480-19223526)
chr3 (413-459)||(21490092-21490138)
chr3 (413-459)||(23217266-23217312)
chr3 (413-459)||(26390692-26390738)
chr3 (413-459)||(27212839-27212885)
chr3 (413-459)||(27449119-27449165)
chr3 (413-459)||(28859622-28859668)
chr3 (413-459)||(29216023-29216069)
chr3 (413-459)||(29704090-29704136)
chr3 (410-459)||(18380055-18380104)
chr3 (413-457)||(10803753-10803797)
chr3 (413-457)||(31433770-31433814)
[»] chr2 (22 HSPs)
chr2 (413-459)||(22140422-22140468)
chr2 (413-459)||(28319637-28319683)
chr2 (413-459)||(32300482-32300528)
chr2 (410-459)||(23388433-23388482)
chr2 (413-459)||(28841400-28841446)
chr2 (413-459)||(31266385-31266431)
chr2 (413-459)||(32008983-32009029)
chr2 (413-459)||(41637649-41637695)
chr2 (410-456)||(44476430-44476476)
chr2 (413-456)||(21293769-21293812)
chr2 (413-459)||(1141567-1141613)
chr2 (413-459)||(13613151-13613197)
chr2 (413-459)||(13788113-13788159)
chr2 (413-459)||(15636793-15636839)
chr2 (413-459)||(20065132-20065178)
chr2 (413-451)||(23858015-23858053)
chr2 (413-459)||(27327647-27327693)
chr2 (417-459)||(27523042-27523084)
chr2 (413-459)||(28262395-28262441)
chr2 (413-459)||(30783369-30783415)
chr2 (413-459)||(43408569-43408615)
chr2 (415-459)||(44722963-44723007)
[»] chr1 (28 HSPs)
chr1 (413-459)||(9464138-9464184)
chr1 (413-459)||(25788055-25788101)
chr1 (412-459)||(41752468-41752515)
chr1 (413-459)||(4340442-4340488)
chr1 (413-459)||(6412111-6412157)
chr1 (413-459)||(6459252-6459298)
chr1 (413-459)||(12161849-12161895)
chr1 (413-459)||(12720844-12720890)
chr1 (413-459)||(19865279-19865325)
chr1 (413-459)||(20408218-20408264)
chr1 (413-459)||(22158837-22158883)
chr1 (413-459)||(23457932-23457978)
chr1 (413-451)||(27253913-27253951)
chr1 (413-459)||(45839327-45839373)
chr1 (413-459)||(50845388-50845434)
chr1 (413-459)||(52183713-52183759)
chr1 (413-456)||(9259241-9259284)
chr1 (413-459)||(9110033-9110079)
chr1 (413-459)||(9177135-9177181)
chr1 (413-451)||(13102359-13102397)
chr1 (413-459)||(13523019-13523065)
chr1 (413-455)||(17200068-17200110)
chr1 (413-451)||(22789649-22789687)
chr1 (413-459)||(28229513-28229559)
chr1 (413-459)||(41071893-41071939)
chr1 (413-459)||(41120795-41120841)
chr1 (413-459)||(41359023-41359069)
chr1 (413-457)||(17661087-17661131)
[»] chr8 (26 HSPs)
chr8 (413-457)||(4331013-4331057)
chr8 (413-459)||(5670227-5670273)
chr8 (413-459)||(6816441-6816487)
chr8 (413-459)||(8789873-8789919)
chr8 (413-459)||(11938778-11938824)
chr8 (413-459)||(30687969-30688015)
chr8 (413-451)||(31399566-31399604)
chr8 (413-459)||(32247942-32247988)
chr8 (413-457)||(19240902-19240946)
chr8 (413-457)||(19314086-19314130)
chr8 (413-457)||(19488119-19488163)
chr8 (413-456)||(23752344-23752387)
chr8 (413-456)||(24193254-24193297)
chr8 (413-456)||(24576082-24576125)
chr8 (413-459)||(3823166-3823212)
chr8 (413-459)||(4647813-4647859)
chr8 (413-459)||(17103923-17103969)
chr8 (413-459)||(17824674-17824720)
chr8 (413-459)||(18010118-18010164)
chr8 (413-459)||(19256245-19256291)
chr8 (413-459)||(19493713-19493759)
chr8 (413-451)||(21350519-21350557)
chr8 (413-459)||(25655916-25655962)
chr8 (413-459)||(26399065-26399111)
chr8 (413-459)||(29350956-29351002)
chr8 (413-451)||(40289479-40289517)
[»] scaffold0219 (1 HSPs)
scaffold0219 (413-459)||(19638-19684)
[»] scaffold0009 (1 HSPs)
scaffold0009 (413-459)||(182565-182611)
[»] scaffold0007 (2 HSPs)
scaffold0007 (413-459)||(3777-3823)
scaffold0007 (413-457)||(202811-202855)
[»] scaffold0001 (3 HSPs)
scaffold0001 (415-459)||(8170-8214)
scaffold0001 (415-459)||(21902-21946)
scaffold0001 (413-459)||(84338-84384)
[»] scaffold0717 (1 HSPs)
scaffold0717 (417-459)||(981-1023)
[»] scaffold0603 (1 HSPs)
scaffold0603 (413-459)||(6037-6083)
[»] scaffold0576 (1 HSPs)
scaffold0576 (413-451)||(9287-9325)
[»] scaffold0108 (1 HSPs)
scaffold0108 (417-459)||(12687-12729)
[»] scaffold0087 (1 HSPs)
scaffold0087 (413-459)||(37845-37891)
[»] scaffold0076 (1 HSPs)
scaffold0076 (413-459)||(26518-26564)
[»] scaffold0014 (1 HSPs)
scaffold0014 (413-459)||(22246-22292)
[»] scaffold0006 (2 HSPs)
scaffold0006 (413-459)||(84732-84778)
scaffold0006 (413-459)||(121045-121091)
[»] scaffold0128 (1 HSPs)
scaffold0128 (413-457)||(10721-10765)


Alignment Details
Target: chr4 (Bit Score: 171; Significance: 2e-91; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 192 - 362
Target Start/End: Original strand, 24682164 - 24682334
Alignment:
Q  192 ctatataagtaaatcctatcatatcaactttttgtattcactcgtttgttatgaaaatttatattcctcatacgctaattgatcactatcttcttctcaa 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24682164 ctatataagtaaatcctatcatatcaactttttgtattcactcgtttgttatgaaaatttatattcctcatacgctaattgatcactatcttcttctcaa 24682263  T
Q  292 cctttccctttttctttgatctctttcttcacaatttggaaccctaattgttccatcaactattactacta 362  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24682264 cctttccctttttctttgatctctttcttcacaatttggaaccctaattgttccatcaactattactacta 24682334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 508 - 649
Target Start/End: Original strand, 24682478 - 24682619
Alignment:
Q  508 agtagtgtatactcaatcaattttctagtgccatgtatgaaacaaaaatctaaaatcatattctagatcatttaatttgttgaatggaaattcatttaag 607  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24682478 agtagtgtatactcaatcaattttctagtgccatttatgaaacaaaaatctaaaatcatattctagatcatttaatttgttgaatggaaattcatttaag 24682577  T
Q  608 aacaagaaagagatctattcatatcatttaatatcattgttt 649  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  24682578 aacaagaaagaggtctattcatatcatttaatatcattgttt 24682619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 6 - 122
Target Start/End: Original strand, 24681978 - 24682094
Alignment:
Q  6 caattacatctgcataaggcatgtccttgcacaatattgttgtgatatatttcatgtttaagagtaattacttgtattacaagcaagctctaactggatt 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  24681978 caattacatctgcataaggcatgtccttgcacaatattgttgtgatatatttcatgtttaagagtaattacttgtattacaagcaagctctaaatggatt 24682077  T
Q  106 cagtgaatcgattctaa 122  Q
    |||||| ||||||||||    
T  24682078 cagtgattcgattctaa 24682094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 24682385 - 24682431
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||||||||||||||||||||||| ||||||| |||||||    
T  24682385 tcacaaattccatggtcgcaaaatttagtggtggaattagagaggga 24682431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 37378681 - 37378727
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  37378681 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 37378727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 5473928 - 5473882
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||    
T  5473928 tcaccaattccttggtcgcaaaatttagtgacggaattaaagaggga 5473882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 19680482 - 19680528
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  19680482 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 19680528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 19839258 - 19839212
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  19839258 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 19839212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 22156659 - 22156705
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  22156659 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 22156705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 27040083 - 27040129
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  27040083 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 27040129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 29625404 - 29625358
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||    
T  29625404 tcacaaattccatagtcgcaaaatttagtgacggaattagagaggga 29625358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 30508066 - 30508020
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  30508066 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 30508020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 46286287 - 46286333
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  46286287 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 46286333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 55309271 - 55309317
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  55309271 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 55309317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 9670537 - 9670581
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  9670537 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 9670581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 2275736 - 2275782
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| || ||||||||||||||| |||||||| |||||||    
T  2275736 tcacaaattccttgatcgcaaaatttagtgacggaattagagaggga 2275782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 5399688 - 5399642
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||| ||||||||||||| |||||||| |||||||    
T  5399688 tcacaaattccttggttgcaaaatttagtgacggaattagagaggga 5399642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 9059010 - 9059056
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||| || |||||||| |||||||    
T  9059010 tcacaaattccttggtcgcaaaatttaatgacggaattagagaggga 9059056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 13028874 - 13028920
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  13028874 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 13028920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 14944825 - 14944779
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  14944825 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 14944779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 18051918 - 18051872
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| || ||||||||||||||||| |||||||| |||||||    
T  18051918 tcacaaatttcacggtcgcaaaatttagtgacggaattagagaggga 18051872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 18714981 - 18714935
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||| |||||||||||| |||||||| |||||||    
T  18714981 tcacaaattccttggtctcaaaatttagtgacggaattagagaggga 18714935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 22128370 - 22128416
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| | |||||| |||||||    
T  22128370 tcacaaattccttggtcgcaaaatttagtgacagaattagagaggga 22128416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 25147800 - 25147754
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  25147800 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 25147754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 32175795 - 32175841
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  32175795 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 32175841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 459
Target Start/End: Complemental strand, 12072044 - 12071995
Alignment:
Q  410 tcttcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||| ||||||| || ||||||||||||||| |||||||| |||||||    
T  12072044 tcttcataaattccttgatcgcaaaatttagtgacggaattagagaggga 12071995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 417 - 457
Target Start/End: Complemental strand, 22168343 - 22168303
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||| |||||||||||||||||| |||||||| |||||    
T  22168343 aaattccttggtcgcaaaatttagtgccggaattagagagg 22168303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 411 - 455
Target Start/End: Complemental strand, 34557264 - 34557220
Alignment:
Q  411 cttcacaaattccatggtcgcaaaatttagtggcggaattaaaga 455  Q
    ||||||||||||| ||||| ||||||||| || ||||||||||||    
T  34557264 cttcacaaattccttggtcacaaaatttaatgacggaattaaaga 34557220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 38223587 - 38223543
Alignment:
Q  415 acaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||| | |||||| |||||||    
T  38223587 acaaattccttggtcgcaaaatttagtgacagaattagagaggga 38223543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.000000000001; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 304 - 346
Target Start/End: Original strand, 44487767 - 44487809
Alignment:
Q  304 tctttgatctctttcttcacaatttggaaccctaattgttcca 346  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  44487767 tctttgatctctttcttcacaatttggaatcctaattgttcca 44487809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 48933217 - 48933173
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  48933217 tcacaaattccatggtcgcaaaatttagtgacggaattagagagg 48933173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 2650886 - 2650932
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  2650886 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 2650932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 10050894 - 10050940
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  10050894 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 10050940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 11036588 - 11036542
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  11036588 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 11036542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 20174101 - 20174055
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  20174101 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 20174055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 21917392 - 21917438
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  21917392 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 21917438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 22486475 - 22486429
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  22486475 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 22486429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 23699883 - 23699929
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| | ||||||||||||||    
T  23699883 tcacaaatttcatggtcgcaaaatttagtgacagaattaaagaggga 23699929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 36636587 - 36636541
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  36636587 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 36636541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 38057713 - 38057667
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||| ||||||| ||||||||||||||||    
T  38057713 tcacaaattccttggtcgcaaagtttagtgacggaattaaagaggga 38057667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 816249 - 816295
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  816249 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 816295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 1842975 - 1842937
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  1842975 tcacaaattccttggtcgcaaaatttagtgacggaatta 1842937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 7733370 - 7733416
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||| | |||||||| |||||||    
T  7733370 tcacaaattccttggtcgcaaaatttagagacggaattagagaggga 7733416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 15014463 - 15014509
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| | |||||||||||||||| |||||||| |||||||    
T  15014463 tcacaaattccttagtcgcaaaatttagtgacggaattagagaggga 15014509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 18217910 - 18217864
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| || ||||| |||||||    
T  18217910 tcacaaattccttggtcgcaaaatttagtgacgaaattagagaggga 18217864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 20429546 - 20429500
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||| ||||||||||| |||||||| |||||||    
T  20429546 tcacaaatttcatggtcgtaaaatttagtgacggaattagagaggga 20429500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 23539313 - 23539267
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||||| ||||||||||||| || |||||||| |||||||    
T  23539313 tcacaaattccatagtcgcaaaatttaatgacggaattagagaggga 23539267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 23577247 - 23577285
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  23577247 tcacaaattccttggtcgcaaaatttagtgacggaatta 23577285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 23750794 - 23750840
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||| ||||||||||| |||||||| |||||||    
T  23750794 tcacaaattccttggtcgtaaaatttagtgacggaattagagaggga 23750840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 26577346 - 26577300
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| ||| |||| |||||||    
T  26577346 tcacaaattccttggtcgcaaaatttagtgacggtattagagaggga 26577300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 27806099 - 27806053
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||| ||||||||||| |||||||| |||||||    
T  27806099 tcacaaattccttggtcgtaaaatttagtgacggaattagagaggga 27806053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 28800959 - 28800913
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  28800959 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 28800913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 31042332 - 31042286
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| | |||||| |||||||    
T  31042332 tcacaaattccttggtcgcaaaatttagtgacagaattagagaggga 31042286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 31425569 - 31425615
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  31425569 tcacaaattctgtggtcgcaaaatttagtgacggaattagagaggga 31425615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 459
Target Start/End: Original strand, 37135347 - 37135389
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||| ||||||||||| |||||||| |||||||    
T  37135347 aaattccatggtcgtaaaatttagtgacggaattagagaggga 37135389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 39979682 - 39979728
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||| || |||||||| |||||||    
T  39979682 tcacaaattccttggtcgcaaaatttaatgacggaattagagaggga 39979728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 40847493 - 40847539
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  40847493 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 40847539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 45664849 - 45664803
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| || ||||||||||||||| |||||||| |||||||    
T  45664849 tcacaaattccttgatcgcaaaatttagtgacggaattagagaggga 45664803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 47523708 - 47523754
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  47523708 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 47523754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 414 - 459
Target Start/End: Complemental strand, 27304950 - 27304905
Alignment:
Q  414 cacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||| ||| |||||||||||||| |||||||| |||||||    
T  27304950 cacaaattccttggccgcaaaatttagtgacggaattagagaggga 27304905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 1824258 - 1824302
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||    
T  1824258 tcacaaatttcttggtcgcaaaatttagtgacggaattagagagg 1824302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.000000000001; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 27705503 - 27705457
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  27705503 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 27705457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 13145083 - 13145040
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||||| |||||||||||||||||| |||||||||||||    
T  13145083 tcacaaattccttggtcgcaaaatttagtgacggaattaaagag 13145040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 2992696 - 2992650
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  2992696 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 2992650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 9893044 - 9892998
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  9893044 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 9892998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 18033583 - 18033629
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  18033583 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 18033629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 18492450 - 18492412
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  18492450 tcacaaattccatggtcgcaaaatttagtgacggaatta 18492412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 22579407 - 22579453
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||    
T  22579407 tcacaaattctatggtcgcaaaatttagtgacggaattagagaggga 22579453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 25398083 - 25398037
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  25398083 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 25398037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 2669390 - 2669346
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  2669390 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 2669346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 6978358 - 6978314
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  6978358 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 6978314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 495685 - 495728
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||    
T  495685 tcacaaattccttggtcgcaaaatttagtgacggaattagagag 495728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 11049809 - 11049852
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||    
T  11049809 tcacaaattccttggtcgcaaaatttagtgacggaattagagag 11049852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 416 - 459
Target Start/End: Complemental strand, 21141017 - 21140974
Alignment:
Q  416 caaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||| |||||||||||||||||||| |||||||| |||||||    
T  21141017 caaatttcatggtcgcaaaatttagtgacggaattagagaggga 21140974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 6598545 - 6598499
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  6598545 tcacaaattacttggtcgcaaaatttagtgacggaattagagaggga 6598499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 11077730 - 11077684
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| ||| |||| |||||||    
T  11077730 tcacaaattccttggtcgcaaaatttagtgacggtattagagaggga 11077684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 12951789 - 12951743
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||| || |||||||| |||||||    
T  12951789 tcacaaattccttggtcgcaaaatttaatgacggaattagagaggga 12951743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 15364516 - 15364554
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  15364516 tcacaaattccttggtcgcaaaatttagtgacggaatta 15364554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 15509237 - 15509191
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||| ||||||||||| |||||||| |||||||    
T  15509237 tcacaaatttcatggtcggaaaatttagtgacggaattagagaggga 15509191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 459
Target Start/End: Complemental strand, 17919613 - 17919571
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||| |||||||||||||||||| |||||||| |||||||    
T  17919613 aaattccttggtcgcaaaatttagtgacggaattagagaggga 17919571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 20182226 - 20182180
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||| ||||||||||||||| |||||||| |||||||    
T  20182226 tcacaaatttcatgatcgcaaaatttagtgacggaattagagaggga 20182180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 22083919 - 22083873
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||| ||| |||||||| |||||||    
T  22083919 tcacaaattccttggtcgcaaaattttgtgacggaattagagaggga 22083873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 22153765 - 22153811
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||| ||||||||||||||| |||||||| |||||||    
T  22153765 tcacaaatttcatgatcgcaaaatttagtgacggaattagagaggga 22153811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 23281867 - 23281821
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||  ||||||||||||||||||| |||||||| |||||||    
T  23281867 tcacaaattttatggtcgcaaaatttagtgacggaattagagaggga 23281821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 26939668 - 26939622
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  26939668 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 26939622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 28364992 - 28364946
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  28364992 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 28364946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 19175835 - 19175879
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||    
T  19175835 tcacaaatttcttggtcgcaaaatttagtgacggaattagagagg 19175879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 33250766 - 33250810
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||    
T  33250766 tcacaaattccttggtcgcaaaatttagtgatggaattagagagg 33250810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.000000000001; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 28265533 - 28265579
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  28265533 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 28265579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 618375 - 618329
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  618375 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 618329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 746926 - 746972
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  746926 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 746972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 8886909 - 8886955
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  8886909 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 8886955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 10494818 - 10494772
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  10494818 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 10494772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 15061054 - 15061008
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  15061054 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 15061008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 17039689 - 17039735
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  17039689 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 17039735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 23975716 - 23975670
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  23975716 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 23975670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 33818619 - 33818665
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  33818619 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 33818665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 36196475 - 36196429
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||| |||||||||||||||||||||| |||||||| |||||||    
T  36196475 tcacaaaatccatggtcgcaaaatttagtgacggaattagagaggga 36196429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 417 - 458
Target Start/End: Original strand, 33735035 - 33735076
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagaggg 458  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  33735035 aaattccttggtcgcaaaatttagtgacggaattaaagaggg 33735076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 8108918 - 8108962
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||    
T  8108918 tcacaaatttcatggtcgcaaaatttagtgacggaattagagagg 8108962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 26708643 - 26708687
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  26708643 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 26708687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 26978377 - 26978421
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  26978377 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 26978421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 4125246 - 4125289
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||    
T  4125246 tcacaaatttcatggtcgcaaaatttagtgacggaattagagag 4125289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 7003788 - 7003831
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    |||||||||||||| ||||||||||||||| |||||||| ||||    
T  7003788 tcacaaattccatgatcgcaaaatttagtgacggaattagagag 7003831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 2472772 - 2472818
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||| || |||||||| |||||||    
T  2472772 tcacaaattccttggtcgcaaaatttaatgacggaattagagaggga 2472818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 5982726 - 5982680
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||| ||||||| |||||||| |||||||    
T  5982726 tcacaaattccttggtcgcaaagtttagtgacggaattagagaggga 5982680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 16121897 - 16121943
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||| |||||||||||| |||||||| |||||||    
T  16121897 tcacaaattccttggtcacaaaatttagtgacggaattagagaggga 16121943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 16631932 - 16631978
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||| |||||||||||| |||||||| |||||||    
T  16631932 tcacaaattccttggtcacaaaatttagtgacggaattagagaggga 16631978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 17036470 - 17036516
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| | |||||| |||||||    
T  17036470 tcacaaattccttggtcgcaaaatttagtgacagaattagagaggga 17036516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 23423814 - 23423860
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||| ||||||||||||| |||||||| |||||||    
T  23423814 tcacaaattccttggttgcaaaatttagtgacggaattagagaggga 23423860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 25397846 - 25397892
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  25397846 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 25397892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 33816816 - 33816854
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  33816816 tcacaaattccttggtcgcaaaatttagtgacggaatta 33816854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 35620401 - 35620439
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  35620401 tcacaaattccttggtcgcaaaatttagtgacggaatta 35620439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 38837729 - 38837775
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  38837729 tcacaaattccttggtcgcaaaatttagtgatggaattagagaggga 38837775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 459
Target Start/End: Complemental strand, 40484121 - 40484079
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||| |||||||||||||||||| |||||||| |||||||    
T  40484121 aaattccttggtcgcaaaatttagtgacggaattagagaggga 40484079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 451
Target Start/End: Complemental strand, 17986813 - 17986772
Alignment:
Q  410 tcttcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    |||||||||||||| | |||||||||||||||| ||||||||    
T  17986813 tcttcacaaattccttcgtcgcaaaatttagtgacggaatta 17986772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 415 - 456
Target Start/End: Original strand, 32726786 - 32726827
Alignment:
Q  415 acaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||| |||||||||||||||||| |||||||| ||||    
T  32726786 acaaattccttggtcgcaaaatttagtgacggaattagagag 32726827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 17079484 - 17079440
Alignment:
Q  415 acaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||| | |||||||||||||||||| |||||||| |||||||    
T  17079484 acaaatttcttggtcgcaaaatttagtgacggaattagagaggga 17079440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.000000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 17582359 - 17582405
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  17582359 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 17582405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 18104588 - 18104634
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  18104588 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 18104634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 19269922 - 19269968
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| ||||||||||||||||    
T  19269922 tcacaaattccttggtcgcaaaatttagtgacggaattaaagaggga 19269968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 1311017 - 1311063
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  1311017 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 1311063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 5261014 - 5260968
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  5261014 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 5260968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 8546322 - 8546276
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||| ||||||||||||||| |||||||| |||||||    
T  8546322 tcacaaattccatgatcgcaaaatttagtgacggaattagagaggga 8546276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 13921402 - 13921356
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  13921402 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 13921356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 16299938 - 16299892
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  16299938 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 16299892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 19545587 - 19545541
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  19545587 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 19545541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 19610415 - 19610369
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  19610415 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 19610369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 23773554 - 23773508
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  23773554 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 23773508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 26098890 - 26098844
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  26098890 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 26098844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 26830500 - 26830546
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||| ||| |||||||| |||||||    
T  26830500 tcacaaattccatggtcgcaaaattttgtgacggaattagagaggga 26830546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 29956449 - 29956411
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  29956449 tcacaaattccatggtcgcaaaatttagtgacggaatta 29956411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 30005604 - 30005566
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  30005604 tcacaaattccatggtcgcaaaatttagtgacggaatta 30005566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 48404937 - 48404891
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  48404937 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 48404891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 21816798 - 21816754
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  21816798 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 21816754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 1745545 - 1745588
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||    
T  1745545 tcacaaattccttggtcgcaaaatttagtgacggaattagagag 1745588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 15064050 - 15064093
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||    
T  15064050 tcacaaattccttggtcgcaaaatttagtgacggaattagagag 15064093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 4393408 - 4393454
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| || ||||||||||||||||| |||||||| |||||||    
T  4393408 tcacaaatttcacggtcgcaaaatttagtgacggaattagagaggga 4393454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 6718787 - 6718749
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  6718787 tcacaaatttcatggtcgcaaaatttagtgacggaatta 6718749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 9652655 - 9652609
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| ||| |||||||||||||||| |||||||| |||||||    
T  9652655 tcacaaatttcatagtcgcaaaatttagtgacggaattagagaggga 9652609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 10941723 - 10941769
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  10941723 tcacaaattccttggtcgcaaaatttagtgatggaattagagaggga 10941769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 11007741 - 11007787
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  11007741 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 11007787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 11219215 - 11219169
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||||| ||||||||||||| || |||||||| |||||||    
T  11219215 tcacaaattccatagtcgcaaaatttaatgacggaattagagaggga 11219169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 13905096 - 13905142
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  13905096 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 13905142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 459
Target Start/End: Complemental strand, 18539877 - 18539835
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||| |||||||||||||||||||| |||||||| |||||||    
T  18539877 aaatttcatggtcgcaaaatttagtgacggaattagagaggga 18539835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 19223526 - 19223480
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||| ||||||||||| |||||||| |||||||    
T  19223526 tcacaaattccttggtcgtaaaatttagtgacggaattagagaggga 19223480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 21490092 - 21490138
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| | |||||| |||||||    
T  21490092 tcacaaattccttggtcgcaaaatttagtgacagaattagagaggga 21490138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 23217266 - 23217312
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||| |||||| |||||||||||| |||||||| |||||||    
T  23217266 tcacaaattctatggtcccaaaatttagtgacggaattagagaggga 23217312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 26390692 - 26390738
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||| |||||||||||| |||||||| |||||||    
T  26390692 tcacaaattccttggtcacaaaatttagtgacggaattagagaggga 26390738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 27212839 - 27212885
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  | |||||||||||||||| ||||||||||||||||    
T  27212839 tcacaaattctttagtcgcaaaatttagtgacggaattaaagaggga 27212885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 27449165 - 27449119
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  27449165 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 27449119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 28859668 - 28859622
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||| ||||||||||||| |||||||| |||||||    
T  28859668 tcacaaattccttggttgcaaaatttagtgacggaattagagaggga 28859622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 29216069 - 29216023
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  29216069 tcacaaattccttggtcgcaaaatttagtgatggaattagagaggga 29216023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 29704090 - 29704136
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||  ||| ||||||||||||||| ||||||||||||||||    
T  29704090 tcacaaattttatgatcgcaaaatttagtgacggaattaaagaggga 29704136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 459
Target Start/End: Complemental strand, 18380104 - 18380055
Alignment:
Q  410 tcttcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||| | || ||| ||||||||||| ||||||||||||||||    
T  18380104 tcttcacaaatttcttgatcgtaaaatttagtgacggaattaaagaggga 18380055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 10803797 - 10803753
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||| | ||||||||||||||| || ||||||||||||||    
T  10803797 tcacaaatttcttggtcgcaaaatttaatgacggaattaaagagg 10803753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 31433814 - 31433770
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||| ||||||||||| |||||||| |||||    
T  31433814 tcacaaattccttggtcgtaaaatttagtgacggaattagagagg 31433770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 22140422 - 22140468
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  22140422 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 22140468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 28319637 - 28319683
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  28319637 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 28319683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 32300528 - 32300482
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  32300528 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 32300482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 410 - 459
Target Start/End: Original strand, 23388433 - 23388482
Alignment:
Q  410 tcttcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||    
T  23388433 tcttcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 23388482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 28841400 - 28841446
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  28841400 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 28841446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 31266431 - 31266385
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  31266431 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 31266385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 32009029 - 32008983
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  32009029 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 32008983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 41637695 - 41637649
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  41637695 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 41637649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 456
Target Start/End: Original strand, 44476430 - 44476476
Alignment:
Q  410 tcttcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    |||||||||||||| |||||||||||||||||| |||||||| ||||    
T  44476430 tcttcacaaattccttggtcgcaaaatttagtgacggaattagagag 44476476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 21293769 - 21293812
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||    
T  21293769 tcacaaattccatggtcgtaaaatttagtgacggaattagagag 21293812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 1141613 - 1141567
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| | |||||| |||||||    
T  1141613 tcacaaatttcatggtcgcaaaatttagtgacagaattagagaggga 1141567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 13613151 - 13613197
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  13613151 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 13613197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 13788113 - 13788159
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| || ||||| |||||||    
T  13788113 tcacaaattccttggtcgcaaaatttagtgacgaaattagagaggga 13788159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 15636793 - 15636839
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| || ||||| |||||||    
T  15636793 tcacaaatttcatggtcgcaaaatttagtgacgaaattagagaggga 15636839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 20065132 - 20065178
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| | |||||| |||||||    
T  20065132 tcacaaatttcatggtcgcaaaatttagtgactgaattagagaggga 20065178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 23858015 - 23858053
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  23858015 tcacaaattccttggtcgcaaaatttagtgacggaatta 23858053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 27327693 - 27327647
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| | | |||||||||||||| ||||||||||||||||    
T  27327693 tcacaaattccttagacgcaaaatttagtgacggaattaaagaggga 27327647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 459
Target Start/End: Complemental strand, 27523084 - 27523042
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||| |||||||||||||||||| |||||||| |||||||    
T  27523084 aaattccttggtcgcaaaatttagtgacggaattagagaggga 27523042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 28262441 - 28262395
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| ||||||| |||||||||||| |||||||| |||||||    
T  28262441 tcacaaatttcatggtcacaaaatttagtgacggaattagagaggga 28262395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 30783415 - 30783369
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  30783415 tcacaaattcattggtcgcaaaatttagtgacggaattagagaggga 30783369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 43408569 - 43408615
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  43408569 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 43408615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 415 - 459
Target Start/End: Complemental strand, 44723007 - 44722963
Alignment:
Q  415 acaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||| |||||||| |||||||    
T  44723007 acaaattccttagtcgcaaaatttagtgacggaattagagaggga 44722963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 9464184 - 9464138
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  9464184 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 9464138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 25788055 - 25788101
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||    
T  25788055 tcacaaattccatggtcgcaaaatttagtgacggaattagagaggga 25788101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 459
Target Start/End: Complemental strand, 41752515 - 41752468
Alignment:
Q  412 ttcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||    
T  41752515 ttcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 41752468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 4340488 - 4340442
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  4340488 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 4340442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 6412111 - 6412157
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||||    
T  6412111 tcacaaatttcttggtcgcaaaatttagtgacggaattaaagaggga 6412157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 6459298 - 6459252
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  6459298 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 6459252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 12161895 - 12161849
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  12161895 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 12161849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 12720890 - 12720844
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  12720890 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 12720844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 19865325 - 19865279
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  19865325 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 19865279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 20408218 - 20408264
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||    
T  20408218 tcacaaattccatggtcgcaaaatttagtaacggaattagagaggga 20408264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 22158883 - 22158837
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  22158883 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 22158837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 23457978 - 23457932
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  23457978 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 23457932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 27253913 - 27253951
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  27253913 tcacaaattccatggtcgcaaaatttagtgacggaatta 27253951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 45839373 - 45839327
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  45839373 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 45839327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 50845388 - 50845434
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  50845388 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 50845434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 52183759 - 52183713
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| |||||||| |||||||    
T  52183759 tcacaaatttcatggtcgcaaaatttagtgacggaattagagaggga 52183713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 9259241 - 9259284
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||    
T  9259241 tcacaaatttcatggtcgcaaaatttagtgacggaattagagag 9259284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 9110033 - 9110079
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  9110033 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 9110079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 9177181 - 9177135
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| || |||||||||||||    
T  9177181 tcacaaatttcttggtcgcaaaatttagtgacgaaattaaagaggga 9177135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 13102397 - 13102359
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  13102397 tcacaaattccttggtcgcaaaatttagtgacggaatta 13102359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 13523019 - 13523065
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  13523019 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 13523065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 455
Target Start/End: Original strand, 17200068 - 17200110
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaaga 455  Q
    ||||||||||  |||||||||||||||||| ||||||||||||    
T  17200068 tcacaaattcattggtcgcaaaatttagtgacggaattaaaga 17200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 22789649 - 22789687
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    |||||||||||||||||||||||||||||| | ||||||    
T  22789649 tcacaaattccatggtcgcaaaatttagtgactgaatta 22789687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 28229513 - 28229559
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  28229513 tcacaaattccttggtcgcaaaatttagtgatggaattagagaggga 28229559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 41071893 - 41071939
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  41071893 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 41071939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 41120795 - 41120841
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  41120795 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 41120841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 41359069 - 41359023
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  41359069 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 41359023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 17661131 - 17661087
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||| ||||||||||||||||||||  ||||||| |||||    
T  17661131 tcacaaatttcatggtcgcaaaatttagtgatggaattagagagg 17661087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 4331057 - 4331013
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    |||||||||||||||||||||||||||||| |||||||| |||||    
T  4331057 tcacaaattccatggtcgcaaaatttagtgacggaattagagagg 4331013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 5670227 - 5670273
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  5670227 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 5670273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 6816441 - 6816487
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||| |||||||||||||||||||||| |||||||    
T  6816441 tcacaaattccttggttgcaaaatttagtggcggaattagagaggga 6816487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 8789919 - 8789873
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  8789919 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 8789873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 11938824 - 11938778
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  11938824 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 11938778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 30688015 - 30687969
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  30688015 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 30687969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 31399566 - 31399604
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  31399566 tcacaaattccatggtcgcaaaatttagtgacggaatta 31399604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 32247988 - 32247942
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||| ||||||||||||||||||| |||||||| |||||||    
T  32247988 tcacaaattctatggtcgcaaaatttagtgacggaattagagaggga 32247942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 19240946 - 19240902
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  19240946 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 19240902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 19314130 - 19314086
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  19314130 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 19314086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 19488119 - 19488163
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  19488119 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 19488163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 23752344 - 23752387
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||    
T  23752344 tcacaaattccttggtcgcaaaatttagtgacggaattagagag 23752387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 24193254 - 24193297
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||| |||||||||||||||||||| |||||||| ||||    
T  24193254 tcacaaatttcatggtcgcaaaatttagtgacggaattagagag 24193297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 24576082 - 24576125
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagag 456  Q
    ||||||||||| |||||||||||||||||| |||||||| ||||    
T  24576082 tcacaaattccttggtcgcaaaatttagtgacggaattagagag 24576125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 3823212 - 3823166
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  3823212 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 3823166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 4647813 - 4647859
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| ||| |||||||||||||||| |||||||| |||||||    
T  4647813 tcacaaatttcatagtcgcaaaatttagtgacggaattagagaggga 4647859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 17103923 - 17103969
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  17103923 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 17103969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 17824674 - 17824720
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  17824674 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 17824720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 18010118 - 18010164
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| || ||||||||||||||| |||||||| |||||||    
T  18010118 tcacaaattccttgatcgcaaaatttagtgacggaattagagaggga 18010164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 19256291 - 19256245
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  19256291 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 19256245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 19493713 - 19493759
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  19493713 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 19493759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Complemental strand, 21350557 - 21350519
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  21350557 tcacaaattccttggtcgcaaaatttagtgacggaatta 21350519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 25655916 - 25655962
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||||||||||||||||||||||   |||||| |||||||    
T  25655916 tcacaaattccatggtcgcaaaatttagtgatagaattagagaggga 25655962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 26399065 - 26399111
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  26399065 tcacaaattcgttggtcgcaaaatttagtgacggaattagagaggga 26399111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 29351002 - 29350956
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||||| || ||||| |||||||    
T  29351002 tcacaaatttcatggtcgcaaaatttagtgacgcaattagagaggga 29350956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 40289479 - 40289517
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  40289479 tcacaaattccttggtcgcaaaatttagtgacggaatta 40289517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 19684 - 19638
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  19684 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 19638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 182611 - 182565
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  182611 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 182565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 3823 - 3777
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||    
T  3823 tcacaaattccttggtcgcaaaatttagtgacggaattagagaggga 3777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 413 - 457
Target Start/End: Complemental strand, 202855 - 202811
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||    
T  202855 tcacaaattccttggtcgcaaaatttagtgacggaattagagagg 202811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 8170 - 8214
Alignment:
Q  415 acaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||    
T  8170 acaaattccttggtcgcaaaatttagtgacggaattagagaggga 8214  T

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Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 21902 - 21946
Alignment:
Q  415 acaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| |||||||||||||||||| |||||||| |||||||    
T  21902 acaaattccttggtcgcaaaatttagtgacggaattagagaggga 21946  T

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Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 84384 - 84338
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| ||||||| |||||||||||| |||||||| |||||||    
T  84384 tcacaaatttcatggtcacaaaatttagtgacggaattagagaggga 84338  T

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Target: scaffold0717 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 459
Target Start/End: Original strand, 981 - 1023
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||| |||||||||||||||||| |||||||| |||||||    
T  981 aaattccttggtcgcaaaatttagtgacggaattagagaggga 1023  T

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Target: scaffold0603 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 6037 - 6083
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  6037 tcacaaattccttggtcgcaaaatttagtgatggaattagagaggga 6083  T

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Target: scaffold0576 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 451
Target Start/End: Original strand, 9287 - 9325
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaatta 451  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  9287 tcacaaattccttggtcgcaaaatttagtgacggaatta 9325  T

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Target: scaffold0108 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 417 - 459
Target Start/End: Complemental strand, 12729 - 12687
Alignment:
Q  417 aaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||| ||||||||||||||||||| |||||||| |||||||    
T  12729 aaattctatggtcgcaaaatttagtgacggaattagagaggga 12687  T

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Target: scaffold0087 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 37845 - 37891
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    |||||||||  ||||||||||||||||||| |||||||| |||||||    
T  37845 tcacaaattttatggtcgcaaaatttagtgacggaattagagaggga 37891  T

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Target: scaffold0076 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 26564 - 26518
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||  |||||||||||||||||| |||||||| |||||||    
T  26564 tcacaaattctttggtcgcaaaatttagtgacggaattagagaggga 26518  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Complemental strand, 22292 - 22246
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| | |||||||||||||||| |||||||| |||||||    
T  22292 tcacaaattccttagtcgcaaaatttagtgacggaattagagaggga 22246  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 84732 - 84778
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||||| ||||||||||||||||||  ||||||| |||||||    
T  84732 tcacaaattccttggtcgcaaaatttagtgatggaattagagaggga 84778  T

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Target: scaffold0006; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 413 - 459
Target Start/End: Original strand, 121045 - 121091
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagaggga 459  Q
    ||||||||| | |||||||||||||||||| |||||||| |||||||    
T  121045 tcacaaatttcttggtcgcaaaatttagtgacggaattagagaggga 121091  T

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Target: scaffold0128 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 413 - 457
Target Start/End: Original strand, 10721 - 10765
Alignment:
Q  413 tcacaaattccatggtcgcaaaatttagtggcggaattaaagagg 457  Q
    ||||||||||| | |||||||||||||||| |||||||| |||||    
T  10721 tcacaaattccttagtcgcaaaatttagtgacggaattagagagg 10765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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