View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10012_low_2 (Length: 313)
Name: NF10012_low_2
Description: NF10012
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10012_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 294; Significance: 1e-165; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 298
Target Start/End: Complemental strand, 29651451 - 29651154
Alignment:
| Q |
1 |
gaggatttggagaaaatagaagagaattttactgaatcaaatgaaaatgaagaggataaatcaatggatttgaaatgggaagatggtaaattgaggacat |
100 |
Q |
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| T |
29651451 |
gaggatttggagaaaatagaagagaattttactgaatcaaatgaaaatgaagaggataaatcaatggatttgaaatgggaagatggtaaattgaggacat |
29651352 |
T |
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| Q |
101 |
tatctggccattttcttagtggccaaggaaagaatgtgaggataaacattcctttgacaacaccttctcaaaccttttcagaaattagttaccttgtaat |
200 |
Q |
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| T |
29651351 |
tatctggccattttcttagtggccaaggaaagaatgtgaggataaacattcctttgacaacaccttctcaaaccttttcagaaattagttaccttgtaat |
29651252 |
T |
|
| Q |
201 |
ggaagatttgttcaataagtcttcaagaaaatgcaatccagaaggtggtgtgcttcgtgttaataaaacaaggttacatcatgcagaaaagatgatca |
298 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
29651251 |
ggaagatttgttcaataagtcttcaagaaaatgcaatccagaaggtggtgtgcttcgtgttaataaaacaaggttgcatcatgcagaaaagatgatca |
29651154 |
T |
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