View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10018_high_2 (Length: 379)

Name: NF10018_high_2
Description: NF10018
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10018_high_2
NF10018_high_2
[»] chr7 (27 HSPs)
chr7 (146-232)||(33987033-33987119)
chr7 (15-107)||(33986941-33987033)
chr7 (258-368)||(8013652-8013763)
chr7 (258-364)||(12141499-12141606)
chr7 (259-368)||(19296672-19296782)
chr7 (258-364)||(37837649-37837756)
chr7 (258-368)||(42978401-42978513)
chr7 (258-368)||(48061215-48061326)
chr7 (259-368)||(30757006-30757116)
chr7 (259-368)||(34899794-34899901)
chr7 (258-368)||(9450324-9450435)
chr7 (260-368)||(48316999-48317108)
chr7 (258-361)||(19404948-19405052)
chr7 (262-361)||(39171786-39171886)
chr7 (301-368)||(35132788-35132855)
chr7 (258-360)||(13797126-13797229)
chr7 (307-360)||(38051261-38051314)
chr7 (307-363)||(45349994-45350050)
chr7 (301-368)||(22742775-22742842)
chr7 (259-361)||(40992976-40993078)
chr7 (258-360)||(47590107-47590209)
chr7 (310-358)||(5078590-5078638)
chr7 (301-368)||(24351030-24351097)
chr7 (259-363)||(38798584-38798686)
chr7 (310-360)||(25255084-25255134)
chr7 (265-361)||(24770055-24770152)
chr7 (258-364)||(39328983-39329091)
[»] chr6 (15 HSPs)
chr6 (258-368)||(12170287-12170398)
chr6 (259-368)||(33053355-33053465)
chr6 (265-368)||(29320049-29320153)
chr6 (258-364)||(3913765-3913871)
chr6 (259-368)||(605997-606107)
chr6 (258-368)||(30894429-30894539)
chr6 (259-360)||(23128411-23128513)
chr6 (259-360)||(68195-68297)
chr6 (258-348)||(32328790-32328881)
chr6 (258-368)||(7515389-7515500)
chr6 (304-368)||(30776505-30776569)
chr6 (280-356)||(34018375-34018451)
chr6 (301-368)||(545861-545927)
chr6 (313-360)||(30608708-30608754)
chr6 (307-368)||(32191919-32191980)
[»] chr4 (36 HSPs)
chr4 (258-368)||(2520588-2520699)
chr4 (259-368)||(4142941-4143051)
chr4 (259-373)||(19853694-19853808)
chr4 (259-368)||(22610996-22611105)
chr4 (258-368)||(22558652-22558763)
chr4 (259-368)||(53810840-53810950)
chr4 (258-368)||(21686428-21686538)
chr4 (258-360)||(26633865-26633968)
chr4 (258-363)||(29961121-29961227)
chr4 (258-360)||(9165237-9165341)
chr4 (309-368)||(32766377-32766436)
chr4 (258-368)||(43510010-43510121)
chr4 (258-359)||(13633925-13634026)
chr4 (260-364)||(35348119-35348224)
chr4 (258-364)||(10496153-10496259)
chr4 (272-368)||(24099257-24099355)
chr4 (311-367)||(56040833-56040890)
chr4 (262-357)||(48257647-48257743)
chr4 (258-368)||(26091101-26091211)
chr4 (307-360)||(9178218-9178271)
chr4 (258-361)||(9643188-9643293)
chr4 (301-368)||(51888403-51888470)
chr4 (258-368)||(54021672-54021783)
chr4 (307-368)||(45418387-45418448)
chr4 (307-366)||(5119199-5119259)
chr4 (316-368)||(22063967-22064019)
chr4 (301-368)||(18935642-18935708)
chr4 (313-368)||(21225362-21225417)
chr4 (262-324)||(43126694-43126757)
chr4 (301-359)||(36161569-36161627)
chr4 (258-362)||(22300656-22300761)
chr4 (258-326)||(56156782-56156851)
chr4 (313-361)||(10259089-10259136)
chr4 (308-368)||(47320588-47320648)
chr4 (313-361)||(53443993-53444040)
chr4 (312-368)||(55227861-55227917)
[»] chr2 (35 HSPs)
chr2 (258-361)||(7678072-7678176)
chr2 (259-361)||(7646274-7646377)
chr2 (259-368)||(4778555-4778665)
chr2 (259-360)||(7448050-7448152)
chr2 (232-360)||(12677491-12677619)
chr2 (260-368)||(27097593-27097701)
chr2 (258-364)||(31788257-31788364)
chr2 (258-368)||(36943311-36943422)
chr2 (258-360)||(43397314-43397417)
chr2 (259-368)||(9169445-9169554)
chr2 (259-368)||(4098905-4099015)
chr2 (258-364)||(18763269-18763376)
chr2 (258-361)||(1421472-1421577)
chr2 (272-364)||(38444982-38445074)
chr2 (261-360)||(37876793-37876893)
chr2 (258-368)||(5428055-5428166)
chr2 (307-362)||(12648117-12648172)
chr2 (311-368)||(10237400-10237457)
chr2 (258-359)||(35220132-35220231)
chr2 (305-364)||(4041785-4041844)
chr2 (310-364)||(1415419-1415473)
chr2 (302-368)||(3308785-3308851)
chr2 (257-361)||(4904330-4904435)
chr2 (301-360)||(32448816-32448875)
chr2 (301-368)||(37994120-37994186)
chr2 (259-368)||(8809084-8809193)
chr2 (310-364)||(19062543-19062597)
chr2 (307-355)||(24461290-24461338)
chr2 (301-368)||(14955368-14955435)
chr2 (237-326)||(31128977-31129066)
chr2 (311-361)||(39311043-39311093)
chr2 (302-363)||(17994908-17994969)
chr2 (311-359)||(18107932-18107980)
chr2 (260-367)||(19029095-19029202)
chr2 (302-342)||(29574846-29574886)
[»] chr8 (27 HSPs)
chr8 (258-368)||(31013756-31013867)
chr8 (258-364)||(25191255-25191362)
chr8 (259-367)||(10377491-10377599)
chr8 (258-362)||(17693805-17693909)
chr8 (258-368)||(37971088-37971196)
chr8 (258-368)||(20559931-20560040)
chr8 (258-368)||(20571493-20571602)
chr8 (258-368)||(23230437-23230547)
chr8 (258-368)||(29937908-29938018)
chr8 (260-359)||(3673241-3673340)
chr8 (258-364)||(45446000-45446107)
chr8 (258-361)||(40211497-40211602)
chr8 (258-361)||(27110656-27110760)
chr8 (262-356)||(7677477-7677572)
chr8 (258-368)||(15344099-15344210)
chr8 (258-368)||(15433164-15433275)
chr8 (258-368)||(15524468-15524579)
chr8 (301-368)||(1239588-1239655)
chr8 (258-364)||(7883430-7883536)
chr8 (258-364)||(20553434-20553541)
chr8 (302-368)||(8981035-8981101)
chr8 (302-368)||(28897549-28897615)
chr8 (307-368)||(1236878-1236939)
chr8 (258-361)||(8412540-8412645)
chr8 (302-358)||(14916332-14916387)
chr8 (308-368)||(18890890-18890950)
chr8 (312-361)||(14545094-14545144)
[»] chr3 (35 HSPs)
chr3 (259-368)||(10108030-10108138)
chr3 (259-368)||(10232862-10232972)
chr3 (259-368)||(9998258-9998369)
chr3 (259-364)||(21431417-21431522)
chr3 (260-368)||(6954883-6954992)
chr3 (258-362)||(47895942-47896047)
chr3 (258-368)||(45568631-45568742)
chr3 (258-363)||(33579659-33579765)
chr3 (259-368)||(40556503-40556613)
chr3 (260-368)||(47042239-47042348)
chr3 (258-360)||(40487116-40487219)
chr3 (260-361)||(48650929-48651031)
chr3 (260-368)||(32701291-32701400)
chr3 (272-368)||(54148793-54148890)
chr3 (258-368)||(7449089-7449199)
chr3 (258-368)||(7457231-7457341)
chr3 (258-361)||(9797724-9797825)
chr3 (259-368)||(10229266-10229378)
chr3 (258-361)||(21534004-21534106)
chr3 (260-364)||(52923307-52923411)
chr3 (259-368)||(36461618-36461728)
chr3 (258-368)||(31271993-31272105)
chr3 (258-368)||(35865121-35865231)
chr3 (258-368)||(43016646-43016759)
chr3 (258-342)||(38545626-38545711)
chr3 (258-368)||(12050835-12050946)
chr3 (258-361)||(12149976-12150080)
chr3 (311-367)||(21290007-21290063)
chr3 (309-364)||(43488781-43488835)
chr3 (328-364)||(37040633-37040669)
chr3 (311-361)||(29239183-29239232)
chr3 (308-361)||(8914546-8914599)
chr3 (301-361)||(629100-629160)
chr3 (308-368)||(4821649-4821709)
chr3 (328-368)||(36910828-36910868)
[»] chr5 (24 HSPs)
chr5 (258-364)||(38597588-38597695)
chr5 (259-368)||(6012325-6012435)
chr5 (259-364)||(13007020-13007126)
chr5 (259-368)||(34945213-34945323)
chr5 (258-360)||(38007148-38007251)
chr5 (259-364)||(9113916-9114022)
chr5 (261-369)||(25979951-25980060)
chr5 (269-368)||(31391943-31392044)
chr5 (259-368)||(26825220-26825332)
chr5 (258-368)||(7036018-7036129)
chr5 (258-368)||(26878266-26878376)
chr5 (258-368)||(35850575-35850685)
chr5 (244-321)||(4770915-4770992)
chr5 (260-364)||(8096688-8096792)
chr5 (258-368)||(11074087-11074198)
chr5 (301-368)||(2979499-2979566)
chr5 (301-368)||(39567130-39567197)
chr5 (301-368)||(10722607-10722676)
chr5 (269-372)||(6216696-6216800)
chr5 (258-360)||(24229979-24230085)
chr5 (310-360)||(14211076-14211126)
chr5 (310-362)||(11867524-11867575)
chr5 (258-321)||(11977171-11977235)
chr5 (316-368)||(13421792-13421843)
[»] chr1 (27 HSPs)
chr1 (258-368)||(45415353-45415464)
chr1 (258-368)||(31983974-31984085)
chr1 (258-360)||(29738831-29738934)
chr1 (258-363)||(34878463-34878569)
chr1 (234-368)||(7337850-7337984)
chr1 (258-368)||(11462635-11462746)
chr1 (258-361)||(10776654-10776758)
chr1 (258-368)||(5983630-5983741)
chr1 (263-364)||(7836957-7837059)
chr1 (258-337)||(35484596-35484676)
chr1 (258-368)||(14872433-14872544)
chr1 (258-364)||(15435063-15435170)
chr1 (301-368)||(49626748-49626815)
chr1 (259-326)||(41176977-41177045)
chr1 (258-360)||(18939116-18939219)
chr1 (301-368)||(36894428-36894495)
chr1 (282-360)||(32394818-32394896)
chr1 (235-359)||(1742053-1742177)
chr1 (259-368)||(35462224-35462335)
chr1 (313-360)||(45789415-45789462)
chr1 (316-362)||(23291835-23291881)
chr1 (307-359)||(3228114-3228166)
chr1 (312-360)||(34528568-34528616)
chr1 (258-361)||(51916846-51916950)
chr1 (301-368)||(48750028-48750094)
chr1 (311-360)||(15836041-15836090)
chr1 (312-364)||(12635016-12635068)
[»] scaffold0127 (1 HSPs)
scaffold0127 (232-360)||(15258-15386)
[»] scaffold0884 (1 HSPs)
scaffold0884 (258-368)||(2159-2270)
[»] scaffold0017 (1 HSPs)
scaffold0017 (258-368)||(32935-33046)
[»] scaffold0088 (1 HSPs)
scaffold0088 (259-368)||(50578-50688)
[»] scaffold0026 (1 HSPs)
scaffold0026 (259-368)||(72051-72161)
[»] scaffold0445 (1 HSPs)
scaffold0445 (261-364)||(1138-1242)
[»] scaffold0219 (1 HSPs)
scaffold0219 (258-364)||(15029-15136)
[»] scaffold0087 (1 HSPs)
scaffold0087 (301-359)||(25525-25583)
[»] scaffold0634 (1 HSPs)
scaffold0634 (258-361)||(8305-8409)
[»] scaffold0009 (1 HSPs)
scaffold0009 (258-361)||(58273-58377)
[»] scaffold0888 (1 HSPs)
scaffold0888 (301-368)||(1861-1928)
[»] scaffold0603 (1 HSPs)
scaffold0603 (271-359)||(7521-7610)
[»] scaffold0049 (1 HSPs)
scaffold0049 (308-359)||(71479-71529)
[»] scaffold0492 (1 HSPs)
scaffold0492 (311-360)||(12761-12810)


Alignment Details
Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 33987033 - 33987119
Alignment:
Q  146 agtgtgatttttatttttattgttttcaattcgattatgaattaattcaaattgaagagatttcatgatcttatagttaataatgtt 232  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33987033 agtgtgatttttatttttattgttttcaattcgattatgaattaattcaaattgaagagatttcatgatcttatagttaataatgtt 33987119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 107
Target Start/End: Original strand, 33986941 - 33987033
Alignment:
Q  15 aagaatatcaagaatgaaaagaaagatatatgaggaagtagaactcacgaaagaaattctaataaggagagaaataaaaagaaattgttgtca 107  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33986941 aagaatatcaagaatgaaaagaaagatatataaggaaatagaactcacgaaagaaattctaataaggagagaaataaaaagaaattgttgtca 33987033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 8013763 - 8013652
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| |||||||||||||| |||||||| | ||||||| ||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||    
T  8013763 agagaaacttcaacttctctctaaactttctttcttctttgttcatcgaggaggggtggttttagatcattttttgacctagaatcacccctctacatct 8013664  T
Q  357 tttttccccttt 368  Q
    ||||| ||||||    
T  8013663 ttttttcccttt 8013652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 12141606 - 12141499
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||| ||||||| |||||||||||||    
T  12141606 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaagaggggtggttttaggtcattttttgacatagaatcacccctctacatct 12141507  T
Q  357 tttttccc 364  Q
    ||||||||    
T  12141506 tttttccc 12141499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 19296672 - 19296782
Alignment:
Q  259 gagaaactccaacttctctctaactttctttt-tactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    |||||||||||||||| |||||| ||| |||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19296672 gagaaactccaacttccctctaatttttttttgtccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 19296771  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  19296772 ttttccccttt 19296782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 37837756 - 37837649
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||| ||| | ||| ||| || || |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  37837756 agagaaactccaacttctctctaaactttatttctccttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatct 37837657  T
Q  357 tttttccc 364  Q
    ||||||||    
T  37837656 tttttccc 37837649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 42978401 - 42978513
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||| ||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  42978401 agagaaactctaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctacatct 42978500  T
Q  357 tttt-tccccttt 368  Q
    |||| ||||||||    
T  42978501 ttttctccccttt 42978513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 48061215 - 48061326
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| ||| |||||||||||||||| ||||||| ||||||| |||| |||||| |    
T  48061215 agagaaactccaacttctctctaaactttctttatccttcgttcatcgaggagaggtggttttaggtcattttttgacttagaatcaccccactacatat 48061314  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  48061315 tttttccccttt 48061326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 30757116 - 30757006
Alignment:
Q  259 gagaaactccaacttctctctaactttctttttacttt-gttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    |||||||| |||||||||||||| |||  |||  |||| ||| ||||| ||||||||||||||||| || ||||||||||||||| ||||||||||||||    
T  30757116 gagaaacttcaacttctctctaaattttctttctctttcgttcatcgaggaggggtggttttaggtaattttttgacctagaatcacccctctacatctt 30757017  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  30757016 ttttccccttt 30757006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 34899901 - 34899794
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| | |||||||   |||||||||||||| ||||||||||||||| ||||||||||||||    
T  34899901 gagaaactccaacttctctctaaactttctttctccttcgttcaccgatgag---tggttttaggtcattttttgacctagaatcacccctctacatctt 34899805  T
Q  358 ttttccccttt 368  Q
    |||| ||||||    
T  34899804 tttttcccttt 34899794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 9450435 - 9450324
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||| | ||| |||||||| | ||| ||| ||||| ||||| |||||||||||||| ||||||||||||||| ||| |||||||||    
T  9450435 agagaaactccaacttctttttaaactttctttctccttcgttcatcgaggagggatggttttaggtcattttttgacctagaatcacccatctacatct 9450336  T
Q  357 tttttccccttt 368  Q
    | ||||||||||    
T  9450335 tgtttccccttt 9450324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 48317108 - 48316999
Alignment:
Q  260 agaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||| ||||||||||||| ||| |||| | ||| ||| ||| | |||||||||||||||||||| ||| ||||||||||| |||||||||||||||    
T  48317108 agaaactctaacttctctctaaatttgctttctccttcgttcatcaaggaggggtggttttaggtcatttttggacctagaatcacccctctacatcttt 48317009  T
Q  359 tttccccttt 368  Q
    || |||||||    
T  48317008 ttcccccttt 48316999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 19405052 - 19404948
Alignment:
Q  258 agagaaactccaacttctctctaact-ttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| | |||||| | |||  || || ||  ||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  19405052 agagaaactccaacttctctctaaatcttctttctccttaattcattgagaaggggtggttttaggtcattttttgacctagaatcacccctctacatct 19404953  T
Q  357 ttttt 361  Q
    |||||    
T  19404952 ttttt 19404948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 262 - 361
Target Start/End: Complemental strand, 39171886 - 39171786
Alignment:
Q  262 aaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    |||||||||| | ||||||| |||||||| | ||| ||| ||||| ||||||||||| |||||||| ||||||||||||||| |||||||||||||||||    
T  39171886 aaactccaacgtatctctaaactttctttcttcttcgttcatcgaggaggggtggttgtaggtcattttttgacctagaatcacccctctacatcttttt 39171787  T
Q  361 t 361  Q
    |    
T  39171786 t 39171786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 35132788 - 35132855
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  35132788 atcgaggaggggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttccccttt 35132855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 13797229 - 13797126
Alignment:
Q  258 agagaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| |||||||||| ||| ||| |||| |  || ||| ||||| || || |||||||||||||| |||| |||||||||| |||||||||||||    
T  13797229 agagaaacttcaacttctctttaaattttctttctcgttcgttcatcgaggatggatggttttaggtcattttttaacctagaatcacccctctacatct 13797130  T
Q  357 tttt 360  Q
    ||||    
T  13797129 tttt 13797126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 360
Target Start/End: Complemental strand, 38051314 - 38051261
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    ||||||||||||||||||||||||| |||||||||| ||| |||||||| ||||    
T  38051314 gaggggtggttttaggtcatattttaacctagaatcacccatctacatcatttt 38051261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 45350050 - 45349994
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttcc 363  Q
    ||||| |||||||||||||| ||||||||||||||| ||| ||||| ||||||||||    
T  45350050 gagggttggttttaggtcattttttgacctagaatcacccatctacttcttttttcc 45349994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 22742775 - 22742842
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| ||||||||||  |||| | |||||||| ||||||| |||||||||||||||||    
T  22742775 atcgaggaggggtgattttaggtcaatttttaatctagaatcacccctctgcatcttttttccccttt 22742842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 40992976 - 40993078
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| ||||  || | ||| ||| ||||| || || | |||||||||||| |||||||||| |||| | ||||||||||||    
T  40992976 gagaaactccaacttctctctaaactttagttcttcttcgttcatcgaggatgg-tagttttaggtcattttttgacctaaaatcactcctctacatctt 40993074  T
Q  358 tttt 361  Q
    ||||    
T  40993075 tttt 40993078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 47590107 - 47590209
Alignment:
Q  258 agagaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||| |||||||||||||||| ||| |||| |  || ||| || || |||||||| ||||||||||| |||||| |||||||| ||||||||||| |    
T  47590107 agagaaattccaacttctctctaaattttctttctcattcgttcatagaggaggggtgattttaggtcat-ttttgaactagaatcacccctctacattt 47590205  T
Q  357 tttt 360  Q
    ||||    
T  47590206 tttt 47590209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 358
Target Start/End: Complemental strand, 5078638 - 5078590
Alignment:
Q  310 gggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    ||||| ||||||||||| ||||||||||||||| ||||||| |||||||    
T  5078638 gggtgattttaggtcattttttgacctagaatcacccctctgcatcttt 5078590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 24351097 - 24351030
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| ||||||||||  ||||||||||||||| ||||| | |||| ||||| ||||||    
T  24351097 atcgaggaggggtgattttaggtcaatttttgacctagaatcacccctgtgcatccttttttcccttt 24351030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 363
Target Start/End: Original strand, 38798584 - 38798686
Alignment:
Q  259 gagaaactccaacttctctct-aactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||| ||| |||||||||| |  || ||| |||   ||||| ||||||||||||||  |||||| ||||||| ||| |||||||||     
T  38798584 gagaaactccaacttctgtctgaactttctttctcattcgttcatc---gagggatggttttaggtcattctttgacatagaatcacccatctacatctc 38798680  T
Q  358 ttttcc 363  Q
    ||||||    
T  38798681 ttttcc 38798686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 25255084 - 25255134
Alignment:
Q  310 gggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    ||||||||||||||||| |||||||||| |||| ||||| | |||||||||    
T  25255084 gggtggttttaggtcattttttgacctataatcacccctttgcatcttttt 25255134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 361
Target Start/End: Original strand, 24770055 - 24770152
Alignment:
Q  265 ctccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttttt 361  Q
    ||||||||||||||||| |||||||| |  || ||| |||||   |||||| ||||||||||| || |||| |||||||  || ||||||||||||||    
T  24770055 ctccaacttctctctaaactttctttctcattcgttcatcgagacggggtgattttaggtcattttatgacttagaatcatccatctacatctttttt 24770152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 39329091 - 39328983
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttg-acctagaatcgcccctctacatc 355  Q
    |||||||||| ||||| | ||||| |||||||| | ||||||| ||||| |||| |||| |||||||| | ||||  |||||||||  ||| ||| ||||    
T  39329091 agagaaactcaaacttttttctaaactttctttctcctttgttcatcgaggaggagtgggtttaggtctttttttttacctagaattacccatctgcatc 39328992  T
Q  356 ttttttccc 364  Q
    |||||||||    
T  39328991 ttttttccc 39328983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 5e-35; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 12170287 - 12170398
Alignment:
Q  258 agagaaactccaacttctctcta-actttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||||||||||||||||| ||||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  12170287 agagaaactccaacttctctctagactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatct 12170386  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  12170387 tttttccccttt 12170398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 33053465 - 33053355
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  33053465 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcatccctctacatctt 33053366  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  33053365 ttttccccttt 33053355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 265 - 368
Target Start/End: Complemental strand, 29320153 - 29320049
Alignment:
Q  265 ctccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttcc 363  Q
    ||||||||||||| ||| |||||||| | ||| ||| ||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  29320153 ctccaacttctctttaaactttctttctccttcgttcatcgaggatgggtggttttaggtcatattttgatctagaatcacccctctacatcttttttcc 29320054  T
Q  364 ccttt 368  Q
    |||||    
T  29320053 ccttt 29320049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 3913871 - 3913765
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||||||| ||||| ||||| |||||||||||||| ||||||||||||||| ||||||  |||||    
T  3913871 agagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggg-tggttttaggtcattttttgacctagaatcacccctccgcatct 3913773  T
Q  357 tttttccc 364  Q
    ||||||||    
T  3913772 tttttccc 3913765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 605997 - 606107
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||| ||||||| |||||||| | ||| ||| ||||| |||||||| ||||| ||||| ||||||||||| ||| ||||||||||||||    
T  605997 gagaaactccaacttttctctaaactttctttctccttcgttcatcgaggaggggtgattttatgtcattttttgacctaggatcacccctctacatctt 606096  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  606097 ttttccccttt 606107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 30894429 - 30894539
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||| ||||||||||||||  || ||| | ||| ||||||||| ||||||||||||||| |||| ||||||||||||||| |||||||||||||     
T  30894429 agagaaacttcaacttctctctaaacttttttctccttcgttaatcgaggaggggtggttttagatcattttttgacctagaatcacccctctacatctg 30894528  T
Q  358 ttttccccttt 368  Q
    |||| ||||||    
T  30894529 tttttcccttt 30894539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 23128411 - 23128513
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||| ||||||||||||| |||||||| | ||| ||| || || ||||| | |||||||||||| ||||||||||||||| ||||||||||||||    
T  23128411 gagaaactctaacttctctctaaactttctttctccttcgttcattgaggagggatagttttaggtcattttttgacctagaatcacccctctacatctt 23128510  T
Q  358 ttt 360  Q
    |||    
T  23128511 ttt 23128513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 259 - 360
Target Start/End: Complemental strand, 68297 - 68195
Alignment:
Q  259 gagaaactccaacttctctct-aactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatc-gcccctctacatct 356  Q
    ||||||||||||||||||||| |||||||||| | ||| ||| ||||| ||||| ||||||||||| || |||||||||||||||  |||||||||||||    
T  68297 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagggatggttttaggtaat-ttttgacctagaatcaccccctctacatct 68199  T
Q  357 tttt 360  Q
    ||||    
T  68198 tttt 68195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 348
Target Start/End: Complemental strand, 32328881 - 32328790
Alignment:
Q  258 agagaaactccaacttctctcta-actttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccct 348  Q
    |||||||||| |||||||||||| ||||||||| | ||| ||| ||||| |||||||||||||| ||||  |||||||||| |||| |||||    
T  32328881 agagaaactctaacttctctctatactttctttctccttcgttcatcgaggaggggtggttttaagtcagtttttgacctataatcacccct 32328790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 7515500 - 7515389
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatatttt-gacctagaatcgcccctctacatc 355  Q
    |||||| ||||||||||||||||| ||| |||| |  || ||| ||||| ||||||||||||||| | || |||| ||||||||||| |||||||||||     
T  7515500 agagaagctccaacttctctctaaacttgctttctctttcgttcatcgaggaggggtggttttagattatttttttgacctagaatcacccctctacat- 7515402  T
Q  356 ttttttccccttt 368  Q
    ||| |||||||||    
T  7515401 tttgttccccttt 7515389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 30776505 - 30776569
Alignment:
Q  304 gatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||||||||| ||||||||||  ||||||||||||||| ||||||| ||| ||||||| |||||    
T  30776505 gatgaggggtgattttaggtcaatttttgacctagaatcacccctctgcatattttttctccttt 30776569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 280 - 356
Target Start/End: Original strand, 34018375 - 34018451
Alignment:
Q  280 aactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||| | ||| ||| ||||| || ||  ||||||||||||| ||||||||||||||| |||||||||||||    
T  34018375 aactttctttctccttcgttcatcgaggatggaaggttttaggtcattttttgacctagaatcacccctctacatct 34018451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 545861 - 545927
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| ||||||| ||| ||||||||||||||| | | |||||||||||||||||||||    
T  545861 atcgaggaggggtgattttaggccat-ttttgacctagaatcactcttctacatcttttttccccttt 545927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 360
Target Start/End: Complemental strand, 30608754 - 30608708
Alignment:
Q  313 tggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    |||||||||||||| ||||||||||||||| ||||||||||| |||||    
T  30608754 tggttttaggtcat-ttttgacctagaatcacccctctacatattttt 30608708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 32191980 - 32191919
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||||||||||||||||| | |||||| ||| |||| ||| ||| ||||||||| |||||||    
T  32191980 gaggggtggttttaggtccttttttgatctacaatcacccttctgcatctttttcccccttt 32191919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 5e-35; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 2520588 - 2520699
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  2520588 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatct 2520687  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  2520688 tttttccccttt 2520699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 4143051 - 4142941
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||| ||| |||||||| | ||||||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  4143051 gagaaactccaacttctctataaactttctttctcctttgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 4142952  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  4142951 ttttccccttt 4142941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 259 - 373
Target Start/End: Complemental strand, 19853808 - 19853694
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| ||||||||   |||  || ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19853808 gagaaactccaacttctctctaaactttctttccccttcattcatcgaggaggggtggttttaggtcat-ttttgacctagaatcacccctctacatctt 19853710  T
Q  358 ttttcccctttgcttc 373  Q
    ||||||||||| ||||    
T  19853709 ttttccccttttcttc 19853694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 22610996 - 22611105
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| |||  |||| |||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  22610996 gagaaactccaacttctctctaaactttctttctccttcgttcgtcgaggaggggtggttttaggtcat-ttttgacctagaatcacccatctacatctt 22611094  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  22611095 ttttccccttt 22611105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 22558763 - 22558652
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||||||| |||||||||| |||||||| | ||| ||| || || |||||||||||||||||||| ||||||| ||||||| || ||||||||||    
T  22558763 agagaaactccaatttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacctctctacatct 22558664  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  22558663 tttttccccttt 22558652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 53810840 - 53810950
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||| ||||||||||| |||||||  | ||| ||| ||||| |||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  53810840 gagaaactccagcttctctctaaactttcttcctccttcgttcatcgaggaggggtggttttaggtcattttttgacctataatcacccctctacatctt 53810939  T
Q  358 ttttccccttt 368  Q
    ||| |||||||    
T  53810940 tttcccccttt 53810950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 21686538 - 21686428
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||  ||||||||||||| |||||||| | ||||||| ||||| |||||||||||| ||||| | |||||||||| |||| |||||||||||||    
T  21686538 agagaaactttaacttctctctaaactttctttctcctttgttcatcgaggaggggtggtttgaggtctt-ttttgacctaaaatcacccctctacatct 21686440  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  21686439 tttttccccttt 21686428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 26633968 - 26633865
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| || || |||||||||| ||||||||| ||||||||||||||| ||||| |||||||    
T  26633968 agagaaactccaacttctctctaaactttctttcttcttcgttcattgaggaggggtggtcttaggtcattttttgacctagaatcacccctatacatct 26633869  T
Q  357 tttt 360  Q
    ||||    
T  26633868 tttt 26633865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 29961227 - 29961121
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||||| ||||||| ||||| ||||| || |||||||| || ||||||| ||||||| ||| ||||| |||    
T  29961227 agagaaactccaacttctctctaaactttctttttcctttgttcatcgaagagggatgattttaggttattttttgacatagaatcacccatctacttct 29961128  T
Q  357 tttttcc 363  Q
    |||||||    
T  29961127 tttttcc 29961121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 9165341 - 9165237
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttg-acctagaatcgcccctctacatc 355  Q
    |||||||||||||||||||||||| |||||||||| | |  || ||||| ||| |||||||||||||||||||||  |||||||||| ||||||||||||    
T  9165341 agagaaactccaacttctctctaaactttctttttccatcattcatcgaggagaggtggttttaggtcatattttttacctagaatcacccctctacatc 9165242  T
Q  356 ttttt 360  Q
    |||||    
T  9165241 ttttt 9165237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 309 - 368
Target Start/End: Original strand, 32766377 - 32766436
Alignment:
Q  309 ggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  32766377 ggggtggttttaggtcattttttgacctagaatcacccctctacatcttttttccccttt 32766436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 43510010 - 43510121
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| |||||||||| ||| ||||| || | ||| ||| ||||| || ||||||||||||||||| ||||||||||||||| | |||||||||||    
T  43510010 agagaaacttcaacttctctttaaactttcattctccttcgttcatcgaagaagggtggttttaggtcattttttgacctagaatcactcctctacatct 43510109  T
Q  357 tttttccccttt 368  Q
    ||||| ||||||    
T  43510110 ttttttcccttt 43510121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 13633925 - 13634026
Alignment:
Q  258 agagaaactccaacttctctct-aactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||| |||||||||| | ||| | | ||||| ||| |||||||||||||||| ||||||| ||||||| |||||||||||||    
T  13633925 agagaaactccaacttctctctaaactttctttctccttcgctcatcgaggagtggtggttttaggtcat-ttttgacatagaatcacccctctacatct 13634023  T
Q  357 ttt 359  Q
    |||    
T  13634024 ttt 13634026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 260 - 364
Target Start/End: Original strand, 35348119 - 35348224
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||||||||||||| ||| |||| ||| | ||| | | ||||  |||||||| ||||||||||| ||||||||||||||| || ||||||||||||    
T  35348119 agaaactccaacttctctttaaactttttttctccttcgctcatcgtggaggggtgattttaggtcattttttgacctagaatcacctctctacatcttt 35348218  T
Q  359 tttccc 364  Q
    ||||||    
T  35348219 tttccc 35348224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 364
Target Start/End: Original strand, 10496153 - 10496259
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||| ||||| |||||||  | ||| ||| ||||| |||| ||||||||||||||  |||||||||||||||  |||| |||||||    
T  10496153 agagaaactccaacttctttctaaactttcttactccttcgttcatcgaggaggtgtggttttaggtcaatttttgacctagaatc-accctatacatct 10496251  T
Q  357 tttttccc 364  Q
    ||||||||    
T  10496252 tttttccc 10496259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 272 - 368
Target Start/End: Complemental strand, 24099355 - 24099257
Alignment:
Q  272 ttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatatttt-gacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||||||||| |||||||| | ||  ||| ||||| ||| |||||||||||||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  24099355 ttctctctaaactttctttcttctacgttcatcgaggagaggtggttttaggtcatttttttgacctagaatcatccctctacatcttttttccccttt 24099257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 56040890 - 56040833
Alignment:
Q  311 ggtggttttaggtcatatttt-gacctagaatcgcccctctacatcttttttcccctt 367  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  56040890 ggtggttttaggtcatttttttgacctagaatcacccctctacatcttttttcccctt 56040833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 262 - 357
Target Start/End: Complemental strand, 48257743 - 48257647
Alignment:
Q  262 aaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    |||||||||||||||| ||| |||||||| |  || ||  ||||| |||||||||||||| ||||| ||||||||||||||| ||| ||||||||||    
T  48257743 aaactccaacttctctttaaactttctttctcattcgtacatcgaggaggggtggttttatgtcattttttgacctagaatcacccatctacatctt 48257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 26091211 - 26091101
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| | |||||| | |||  || ||||| || | ||| |||||||| || ||||||||||||||| |||||||| ||||    
T  26091211 agagaaactccaacttctctctaaaccttctttctccttcattcatcgaggatgagtgattttaggttattttttgacctagaatcacccctcta-atct 26091113  T
Q  357 tttttccccttt 368  Q
    |||||| |||||    
T  26091112 tttttctccttt 26091101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 360
Target Start/End: Original strand, 9178218 - 9178271
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    |||||||||| ||||||||| ||||||||||||||| ||| |||||||||||||    
T  9178218 gaggggtggtcttaggtcattttttgacctagaatcacccttctacatcttttt 9178271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 361
Target Start/End: Original strand, 9643188 - 9643293
Alignment:
Q  258 agagaaactccaacttctctctaacttt-ctttttactttgttaatcgatgagggg-tggttttaggtcatattttgacctagaatcgcccctctacatc 355  Q
    |||||||||||||||||||||||| ||| |||| |  |||| | ||||| |||||| |||||||| ||||| ||||||||||||||| | | ||| ||||    
T  9643188 agagaaactccaacttctctctaagttttctttatcttttgctcatcgaagagggggtggttttatgtcattttttgacctagaatcactcatctgcatc 9643287  T
Q  356 tttttt 361  Q
    ||||||    
T  9643288 tttttt 9643293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 51888470 - 51888403
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||||||||||||||| ||||||| | ||||| |||||||  ||||||| ||||||||    
T  51888470 atcgaggaggggtggttttaggtcattttttgacattgaatcacccctctcaatcttttatccccttt 51888403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 54021672 - 54021783
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| ||| |||||||||| |||||||| | |||  || ||||| |  | ||||||||||||||| ||||||| || ||||  ||||||||||||    
T  54021672 agagaaacttcaatttctctctaaactttctttcttcttcattcatcgagggagagtggttttaggtcattttttgacataaaatcatccctctacatct 54021771  T
Q  357 tttttccccttt 368  Q
    ||||||| ||||    
T  54021772 tttttcctcttt 54021783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 45418387 - 45418448
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||| ||||||||||||||| |||||||||||||||  ||||||||| || |||||| ||||    
T  45418387 gaggagtggttttaggtcattttttgacctagaatcatccctctacacctcttttcctcttt 45418448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 366
Target Start/End: Original strand, 5119199 - 5119259
Alignment:
Q  307 gaggggtggttttaggtcatattttg-acctagaatcgcccctctacatcttttttcccct 366  Q
    |||||||||||||| ||||| ||||  |||||||||| ||||||||||||||||| |||||    
T  5119199 gaggggtggttttatgtcattttttttacctagaatcacccctctacatctttttccccct 5119259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 22064019 - 22063967
Alignment:
Q  316 ttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||||||||| ||||||||||||||| ||||||| ||| ||||||| |||||    
T  22064019 ttttaggtcattttttgacctagaatcacccctctgcatattttttctccttt 22063967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 18935642 - 18935708
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| ||| ||||||  |||||||||||||||  |||||| |||||||||||||||||    
T  18935642 atcgaggaggggtgatttaaggtcaatttttgacctagaatc-accctctgcatcttttttccccttt 18935708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 368
Target Start/End: Complemental strand, 21225417 - 21225362
Alignment:
Q  313 tggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||||||||||||| |||||| ||| |||| || |||| |||||||||||||||||    
T  21225417 tggttttaggtcattttttgatctaaaatcacctctctccatcttttttccccttt 21225362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 262 - 324
Target Start/End: Original strand, 43126694 - 43126757
Alignment:
Q  262 aaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtc 324  Q
    |||||||||||||||||||| ||||||||||  || ||| ||||| |||||||| |||||||||    
T  43126694 aaactccaacttctctctaaactttctttttttttcgttcatcgaagaggggtgattttaggtc 43126757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 301 - 359
Target Start/End: Original strand, 36161569 - 36161627
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    ||||| ||| |||||||||||||||| ||||||||||||||| ||| ||| ||| ||||    
T  36161569 atcgaggagaggtggttttaggtcattttttgacctagaatcacccatctgcatttttt 36161627  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 22300656 - 22300761
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttactttgt-taatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||  |||  ||||   |  |||| |||| ||||||||||||||| |||||||||| |||| ||||| | ||||     
T  22300656 agagaaactccaacttctctctaaattttatttctctttcactcgtcgaggaggagtggttttaggtcattttttgacctaaaatcacccctttgcatcc 22300755  T
Q  357 tttttc 362  Q
    ||||||    
T  22300756 tttttc 22300761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 326
Target Start/End: Complemental strand, 56156851 - 56156782
Alignment:
Q  258 agagaaactccaacttctctct-aactttctttttactttgttaatcgatgaggggtggttttaggtcat 326  Q
    |||||||||||||||||||||| |||||||||| |  || ||| ||| | || |||||||||||||||||    
T  56156851 agagaaactccaacttctctctaaactttctttcttattcgttcatcaaggatgggtggttttaggtcat 56156782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 10259136 - 10259089
Alignment:
Q  313 tggttttaggtcatattttgacctagaatcgcccctctacatctttttt 361  Q
    |||||||||||||| |||||||||| |||| |||||||||||| |||||    
T  10259136 tggttttaggtcat-ttttgacctaaaatcacccctctacatcgttttt 10259089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 47320648 - 47320588
Alignment:
Q  308 aggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||||||||||||||||||  |||||| || |||| |  |||| |||||||||||||||||    
T  47320648 aggggtggttttaggtcattctttgacttaaaatcacaactctgcatcttttttccccttt 47320588  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 361
Target Start/End: Original strand, 53443993 - 53444040
Alignment:
Q  313 tggttttaggtcatattttgacctagaatcgcccctctacatctttttt 361  Q
    |||||||||||||| ||||||||||||| | ||||||||||| ||||||    
T  53443993 tggttttaggtcat-ttttgacctagaaacacccctctacatttttttt 53444040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 55227861 - 55227917
Alignment:
Q  312 gtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||||||||||| || ||||||||||||||   || |||||||||| ||||||||||    
T  55227861 gtggttttaggtgattttttgacctagaattatccatctacatcttgtttccccttt 55227917  T

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Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 7678176 - 7678072
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  7678176 agagaaactccaacttctctctaaactttctttctccttcgttgatcgatgaggggtggttttaggtcattttttgacctagaatcacccctctacatct 7678077  T
Q  357 ttttt 361  Q
    |||||    
T  7678076 ttttt 7678072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 259 - 361
Target Start/End: Original strand, 7646274 - 7646377
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  7646274 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 7646373  T
Q  358 tttt 361  Q
    ||||    
T  7646374 tttt 7646377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 4778555 - 4778665
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||| ||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  4778555 gagaaactccaacttctttctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 4778654  T
Q  358 ttttccccttt 368  Q
    |||| ||||||    
T  4778655 tttttcccttt 4778665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 259 - 360
Target Start/End: Original strand, 7448050 - 7448152
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||||| ||| ||| ||||| |||||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  7448050 gagaaactccaacttctctctaaactttctttttccttcgttcatcgaggaggggtggttttaggtcattttttgtcctagaatcacccctctacatctt 7448149  T
Q  358 ttt 360  Q
    |||    
T  7448150 ttt 7448152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 232 - 360
Target Start/End: Complemental strand, 12677619 - 12677491
Alignment:
Q  232 tttagccggctttagttttctaccgaagagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattt 330  Q
    ||||||||||  ||||||||||  || ||||||||||||||||||||||| |||||||| | ||||||| ||||| ||||||| |||| ||||||| |||    
T  12677619 tttagccggccctagttttctagtga-gagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtagtttaaggtcattttt 12677521  T
Q  331 tgacctagaatcgcccctctacatcttttt 360  Q
    |||||||||||| |||||||||||||||||    
T  12677520 tgacctagaatcacccctctacatcttttt 12677491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 27097701 - 27097593
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||| ||||||||||| |||||||||||||||  ||||||||||||||    
T  27097701 agaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatc-accctctacatcttt 27097603  T
Q  359 tttccccttt 368  Q
    ||||||||||    
T  27097602 tttccccttt 27097593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 364
Target Start/End: Original strand, 31788257 - 31788364
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| ||| || |||||||||| || ||||||||||||||| |||||||||||||    
T  31788257 agagaaactccaacttctctctaaactttctttcttcttcgttcatcgaggagaggcggttttaggtaattttttgacctagaatcacccctctacatct 31788356  T
Q  357 tttttccc 364  Q
    ||||||||    
T  31788357 tttttccc 31788364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 36943422 - 36943311
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||||||| || ||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  36943422 agagaaactccaatttatctctaaactttctttctccttcgttgatcgaggaggggtggttttaggtcattttttgacctagaatcaccactctacatct 36943323  T
Q  357 tttttccccttt 368  Q
    ||||||| ||||    
T  36943322 tttttcctcttt 36943311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 43397417 - 43397314
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||| ||| |||||||||| ||| ||| |||||  ||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  43397417 agagaaactccaacttctctttaaactttcttttttcttcgttcatcgagaaggggtggttttaggtcattttttgacctagaatcacctctctacatct 43397318  T
Q  357 tttt 360  Q
    ||||    
T  43397317 tttt 43397314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 9169554 - 9169445
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| |  || ||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||| ||    
T  9169554 gagaaactccaacttctctctaaactttctttctcattcgtttatcgaggaggggtggttttaggtcat-ttttgacctagaatcacccctctacatttt 9169456  T
Q  358 ttttccccttt 368  Q
    |||| ||||||    
T  9169455 tttttcccttt 9169445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 4098905 - 4099015
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| |  ||  || ||||| || |||||| |||||||||| ||||||||||||||| ||| ||||||||||    
T  4098905 gagaaactccaacttctctctaaactttctttctctttccttcatcgaggaagggtggctttaggtcattttttgacctagaatcacccatctacatctt 4099004  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  4099005 ttttccccttt 4099015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 364
Target Start/End: Original strand, 18763269 - 18763376
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| ||||||||   |||  |  ||||| ||| |||||||||| ||||| ||||||||||||||| |||||||||||||    
T  18763269 agagaaactccaacttctctctaaactttctttcaccttcatccatcgaggagaggtggttttatgtcattttttgacctagaatcacccctctacatct 18763368  T
Q  357 tttttccc 364  Q
    ||||||||    
T  18763369 tttttccc 18763376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 361
Target Start/End: Original strand, 1421472 - 1421577
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtca-tattttgacctagaatcgcccctctacatc 355  Q
    ||||||||||||||||||| |||| |||||||| | ||| ||| ||||| ||||||||||||||||||| | ||||||  ||||||| ||||||||||||    
T  1421472 agagaaactccaacttctcgctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgatatagaatcacccctctacatc 1421571  T
Q  356 tttttt 361  Q
    ||||||    
T  1421572 tttttt 1421577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 272 - 364
Target Start/End: Original strand, 38444982 - 38445074
Alignment:
Q  272 ttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccc 364  Q
    |||||||||| |||||||| | ||| ||| ||||||||| |||||||||||||||| |||||| |||||||| |||||||||||||||||||||    
T  38444982 ttctctctaaactttctttctccttcgttcatcgatgagaggtggttttaggtcat-ttttgatctagaatcacccctctacatcttttttccc 38445074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 261 - 360
Target Start/End: Complemental strand, 37876893 - 37876793
Alignment:
Q  261 gaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    |||| |||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||  ||||||||||||||| ||| | ||||||||||    
T  37876893 gaaattccaacttctctctaaactttctttcttcttcgttcatcgaggaggggtggttttaggtcaatttttgacctagaatcacccttgtacatctttt 37876794  T
Q  360 t 360  Q
    |    
T  37876793 t 37876793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 5428166 - 5428055
Alignment:
Q  258 agagaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| ||| |||| | ||| ||| ||||| ||||||||||||||||| |  |||||||||||| ||  |  |||||||||    
T  5428166 agagaaactccaacttctctctaaattttctttctccttcgttcatcgaggaggggtggttttaggttaatttttgacctagagtcatcgttctacatct 5428067  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  5428066 tttttccccttt 5428055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 307 - 362
Target Start/End: Complemental strand, 12648172 - 12648117
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttc 362  Q
    |||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  12648172 gaggggtggttttaggtcattttttgacctagaatcacccctccacatcttttttc 12648117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 10237457 - 10237400
Alignment:
Q  311 ggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||| ||||||||||  ||||||||||||||| |||||||||||||||||||||||||    
T  10237457 ggtgattttaggtcaatttttgacctagaatcacccctctacatcttttttccccttt 10237400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 359
Target Start/End: Original strand, 35220132 - 35220231
Alignment:
Q  258 agagaaactccaacttctctct-aactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||| ||||||| |||||||||| | |||  || |||   ||||||||||||||||| || ||||||||||||||| ||||||| |||||    
T  35220132 agagaaactccaacctctctctaaactttctttctccttcattcatc---gaggggtggttttaggttattttttgacctagaatcacccctctccatct 35220228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 305 - 364
Target Start/End: Complemental strand, 4041844 - 4041785
Alignment:
Q  305 atgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccc 364  Q
    ||||||||||||||| | ||||| |||||||||||||| ||||||||||| |||||||||    
T  4041844 atgaggggtggttttggatcatactttgacctagaatcacccctctacattttttttccc 4041785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 1415419 - 1415473
Alignment:
Q  310 gggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccc 364  Q
    |||||||||||||| || |||||| |||||||| |||||||||||||||||||||    
T  1415419 gggtggttttaggttattttttgatctagaatcacccctctacatcttttttccc 1415473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 3308785 - 3308851
Alignment:
Q  302 tcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||| |||||||| ||||||||||  ||||||||||||||| ||||| | |||||||||||||||||    
T  3308785 tcgaggaggggtgattttaggtcaatttttgacctagaatcacccctttgcatcttttttccccttt 3308851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 361
Target Start/End: Complemental strand, 4904435 - 4904330
Alignment:
Q  257 aagagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatc 355  Q
    |||||||||| |||||||||||||| |||||||| |  || ||| || || ||| |||||||||| ||||| |||||||||| |||| || || ||||||    
T  4904435 aagagaaacttcaacttctctctaaactttctttctcattcgtttattgaagagtggtggttttatgtcattttttgacctataatcaccactttacatc 4904336  T
Q  356 tttttt 361  Q
    ||||||    
T  4904335 tttttt 4904330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 360
Target Start/End: Complemental strand, 32448875 - 32448816
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    ||||| ||||||||||||||||||||  ||||||||| |||| ||||||| |||||||||    
T  32448875 atcgaggaggggtggttttaggtcattatttgacctaaaatcacccctctgcatcttttt 32448816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 37994120 - 37994186
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| || ||||||||||||||||| ||||||||||||||| ||||||| ||| || ||||||||||    
T  37994120 atcgaggaagggtggttttaggtcat-ttttgacctagaatcacccctctgcattttgtttccccttt 37994186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 8809084 - 8809193
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||| ||||||||||||| |||||||| | |||  |   |||| ||  ||||||||||| |||| |||||||||| |||| ||||||||||||||    
T  8809084 gagaaactctaacttctctctaaactttctttctccttcatacgtcgaggacaggtggttttagatcat-ttttgacctaaaatcacccctctacatctt 8809182  T
Q  358 ttttccccttt 368  Q
    |||||| ||||    
T  8809183 ttttcctcttt 8809193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 19062597 - 19062543
Alignment:
Q  310 gggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccc 364  Q
    |||||||||||||| || |||||| |||||||| |||||||||||| ||||||||    
T  19062597 gggtggttttaggttattttttgaactagaatcacccctctacatcctttttccc 19062543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 355
Target Start/End: Original strand, 24461290 - 24461338
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatc 355  Q
    |||||||||||||||||||| ||||||||||||||| | ||||| ||||    
T  24461290 gaggggtggttttaggtcattttttgacctagaatcactcctctgcatc 24461338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 14955368 - 14955435
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| ||||| ||||  |||||||||||||||  |||||| |||||||||||| ||||    
T  14955368 atcgaggaggggtgattttaagtcaatttttgacctagaatcatccctctgcatcttttttcctcttt 14955435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 326
Target Start/End: Complemental strand, 31129066 - 31128977
Alignment:
Q  237 ccggctttagttttctaccgaagagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcat 326  Q
    |||||||||||||| ||  || || ||||| |||||||||||||| |||||||| | ||| ||| ||||| |||||||| |||||||||||    
T  31129066 ccggctttagttttttagtga-gaaaaacttcaacttctctctaaactttctttctccttcgttgatcgaggaggggtgattttaggtcat 31128977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 39311093 - 39311043
Alignment:
Q  311 ggtggttttaggtcatattttgacctagaatcgcccctctacatctttttt 361  Q
    |||| ||||||||||| ||||||||||||||| ||| ||||| ||||||||    
T  39311093 ggtgattttaggtcattttttgacctagaatcacccatctacgtctttttt 39311043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 302 - 363
Target Start/End: Complemental strand, 17994969 - 17994908
Alignment:
Q  302 tcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttcc 363  Q
    |||| ||| |||||||||||||||| ||||| |||| |||| || |||| ||||||||||||    
T  17994969 tcgaagagaggtggttttaggtcattttttgccctaaaatcacctctctgcatcttttttcc 17994908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 18107980 - 18107932
Alignment:
Q  311 ggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    |||||||||||||||| ||||||||||||||| || || | ||||||||    
T  18107980 ggtggttttaggtcattttttgacctagaatcacctctttgcatctttt 18107932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 260 - 367
Target Start/End: Complemental strand, 19029202 - 19029095
Alignment:
Q  260 agaaactccaacttctctctaactttctttttacttt-gttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||| || ||||||||||  || ||||  |||| ||| ||||| || |||||||||| | |||| ||||||||||||||| ||| ||| |||||||    
T  19029202 agaaactctaatttctctctaagctttttttctctttcgttcatcgaagatgggtggttttggatcat-ttttgacctagaatcacccatctccatcttt 19029104  T
Q  359 tttcccctt 367  Q
    || ||||||    
T  19029103 ttacccctt 19029095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 302 - 342
Target Start/End: Complemental strand, 29574886 - 29574846
Alignment:
Q  302 tcgatgaggggtggttttaggtcatattttgacctagaatc 342  Q
    |||| ||||||||||||||| |||| |||||||||||||||    
T  29574886 tcgaggaggggtggttttagatcattttttgacctagaatc 29574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 1e-32; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 31013867 - 31013756
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  31013867 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatct 31013768  T
Q  357 tttttccccttt 368  Q
    |||| |||||||    
T  31013767 ttttcccccttt 31013756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 25191362 - 25191255
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||||||| ||||| ||| |||| ||||||||||| ||||||||||||||| ||| |||||||||    
T  25191362 agagaaactccaacttctctctaaactttctttctcctttgttcatcgaggagaggtgattttaggtcattttttgacctagaatcacccatctacatct 25191263  T
Q  357 tttttccc 364  Q
    ||||||||    
T  25191262 tttttccc 25191255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 259 - 367
Target Start/End: Original strand, 10377491 - 10377599
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||| | ||  ||||||||||    
T  10377491 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaa-caccaatctacatctt 10377589  T
Q  358 ttttcccctt 367  Q
    ||| ||||||    
T  10377590 tttccccctt 10377599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 362
Target Start/End: Complemental strand, 17693909 - 17693805
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| || || ||||||| |||||||||||| |||||||||||||||  ||||||||||||    
T  17693909 agagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggttgttttaggtcat-ttttgacctagaatcatccctctacatct 17693811  T
Q  357 tttttc 362  Q
    ||||||    
T  17693810 tttttc 17693805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 37971088 - 37971196
Alignment:
Q  258 agagaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| ||| |||| | |||  || ||||| |||   |||||||||||||| ||||||||||||||| |||||||||||||    
T  37971088 agagaaactccaacttctctctaaattttctttcttcttcattcatcgaggag---tggttttaggtcattttttgacctagaatcacccctctacatct 37971184  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  37971185 tttttccccttt 37971196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 20560040 - 20559931
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||| ||||||||||||||| |||| ||| | ||| ||| ||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||  |    
T  20560040 agagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctctaca--t 20559943  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  20559942 tttttccccttt 20559931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 20571602 - 20571493
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||| ||||||||||||||| |||| ||| | ||| ||| ||||||||||||||||||||| |||| ||| ||||||||||| ||||||||||  |    
T  20571602 agagaaacaccaacttctctctaaactttttttcttcttcgttcatcgatgaggggtggttttagatcatttttggacctagaatcacccctctaca--t 20571505  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  20571504 tttttccccttt 20571493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 23230437 - 23230547
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| || ||||| ||||||||||  |||||||| | |||| |||||||||||||    
T  23230437 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtg-ttttaggtcaatttttgaccaaaaatcacccctctacatct 23230535  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  23230536 tttttccccttt 23230547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 29937908 - 29938018
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||||||| |||||| ||| |||||||| ||||| ||| || || || |||||||||||| |||| ||||||||||||||| |||||||||||||    
T  29937908 agagaaactccaatttctctttaaactttctttctacttcgttcattgaggatgggtggttttagatcat-ttttgacctagaatcacccctctacatct 29938006  T
Q  357 tttttccccttt 368  Q
    |||||| |||||    
T  29938007 tttttcgccttt 29938018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 260 - 359
Target Start/End: Original strand, 3673241 - 3673340
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    ||||||| |||||||||||||| |||||||| | |||| || ||||| ||||| |||||||||||||| |||||||||||||||  ||||||||||||||    
T  3673241 agaaacttcaacttctctctaaactttctttctcctttattcatcgaagagggttggttttaggtcat-ttttgacctagaatcatccctctacatcttt 3673339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 45446107 - 45446000
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| || |||| |||||| ||||| ||||||| |||||||  | ||||||||||    
T  45446107 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaagggtagttttatgtcattttttgacatagaatcatctctctacatct 45446008  T
Q  357 tttttccc 364  Q
    ||||||||    
T  45446007 tttttccc 45446000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 40211602 - 40211497
Alignment:
Q  258 agagaaactccaacttctctctaac-tttctttttactttgttaatcgatgaggggtggttttaggtcatatttt-gacctagaatcgcccctctacatc 355  Q
    ||||||||||||| |||||| |||  ||||||| | ||| ||||||||| ||||||||| ||||||| || |||| ||||||||||| ||||||||||||    
T  40211602 agagaaactccaatttctctttaaaatttctttctccttcgttaatcgaggaggggtggctttaggtaatttttttgacctagaatcacccctctacatc 40211503  T
Q  356 tttttt 361  Q
    ||||||    
T  40211502 tttttt 40211497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 27110760 - 27110656
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | |||  || ||||| || ||||||||||||||||| |||||| ||| |||| | | |||||||||    
T  27110760 agagaaactccaacttctctctaaactttctttctccttcattcatcgaagatgggtggttttaggtcattttttgatctaaaatcacacatctacatct 27110661  T
Q  357 ttttt 361  Q
    |||||    
T  27110660 ttttt 27110656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 262 - 356
Target Start/End: Complemental strand, 7677572 - 7677477
Alignment:
Q  262 aaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||| || |||||||||| ||| |||| | ||| ||| || || |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  7677572 aaactctaatttctctctaaattttctttcttcttcgttcattgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatct 7677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 15344099 - 15344210
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttactttgt-taatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| ||| | ||  ||||   | ||||| ||||||||||||||||||||  ||||||||| |||  ||||||| |||||    
T  15344099 agagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgcatct 15344198  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  15344199 tttttccccttt 15344210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 15433164 - 15433275
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttactttgt-taatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| ||| | ||  ||||   | ||||| ||||||||||||||||||||  ||||||||| |||  ||||||| |||||    
T  15433164 agagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgcatct 15433263  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  15433264 tttttccccttt 15433275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 15524468 - 15524579
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttactttgt-taatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| ||| | ||  ||||   | ||||| ||||||||||||||||||||  ||||||||| |||  ||||||| |||||    
T  15524468 agagaaactccaacttctctctaagtttttcttctctttcactcatcgaggaggggtggttttaggtcattctttgacctaaaattacccctctgcatct 15524567  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  15524568 tttttccccttt 15524579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 1239655 - 1239588
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||||||||||||| |  ||||||||| |||| ||||||| |||||||||||||||||    
T  1239655 atcgaggaggggtggttttaggtccttctttgacctaaaatcacccctctgcatcttttttccccttt 1239588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 7883536 - 7883430
Alignment:
Q  258 agagaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| |||||||| ||||| ||| |||| |  || ||| |||||||| | ||||||||||||||| |||||| ||| |||| |||||||||||||    
T  7883536 agagaaacttcaacttctttctaaattttctttctcattcgttcatcgatgatgagtggttttaggtcat-ttttgatctataatcacccctctacatct 7883438  T
Q  357 tttttccc 364  Q
    ||||||||    
T  7883437 tttttccc 7883430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 20553541 - 20553434
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||| ||||||||||| ||| |||| ||| | ||| ||| ||||| ||||||||||||||| |||| ||| ||||||||||| |||| | |||| |    
T  20553541 agagaaacaccaacttctctttaaactttttttcttcttcgttcatcgaggaggggtggttttagatcatttttggacctagaatcaccccacaacattt 20553442  T
Q  357 tttttccc 364  Q
    ||||||||    
T  20553441 tttttccc 20553434  T

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Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 8981035 - 8981101
Alignment:
Q  302 tcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||| |||||||||||||||||||| |||||||||| |||| ||||| | |||| ||||||||||||    
T  8981035 tcgaggaggggtggttttaggtcattttttgacctaaaatcacccctatgcatcctttttccccttt 8981101  T

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Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 302 - 368
Target Start/End: Original strand, 28897549 - 28897615
Alignment:
Q  302 tcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||| |||||||||||||| ||||| |||||| ||| |||| |||||||||||||||||||| ||||    
T  28897549 tcgaggaggggtggttttaagtcattttttgatctaaaatcacccctctacatcttttttcctcttt 28897615  T

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Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 307 - 368
Target Start/End: Complemental strand, 1236939 - 1236878
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||||||||||||||||||  ||||||||| |||   |||||| |||||||||||||||||    
T  1236939 gaggggtggttttaggtcattctttgacctaaaataatccctctgcatcttttttccccttt 1236878  T

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Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 8412645 - 8412540
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtca-tattttgacctagaatcgcccctctacatc 355  Q
    |||||||||| ||||||||||||| |||||||| |  || ||| |||||  |||||||||||||||||| | |||| |||||||||| |||||  || ||    
T  8412645 agagaaactctaacttctctctaaactttctttctcattcgttcatcgagtaggggtggttttaggtcattttttttacctagaatcaccccttgacgtc 8412546  T
Q  356 tttttt 361  Q
    ||||||    
T  8412545 tttttt 8412540  T

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Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 302 - 358
Target Start/End: Complemental strand, 14916387 - 14916332
Alignment:
Q  302 tcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||| |||||||||||||||||||| ||||||||||||||| ||| ||| |||||||    
T  14916387 tcgaggaggggtggttttaggtcat-ttttgacctagaatcacccatctgcatcttt 14916332  T

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Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 18890950 - 18890890
Alignment:
Q  308 aggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||||| ||||||||||  ||||||||||||||| | | ||| |||||||||||||||||    
T  18890950 aggggtgattttaggtcaatttttgacctagaatcactcatctgcatcttttttccccttt 18890890  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 14545144 - 14545094
Alignment:
Q  312 gtggttttaggtcatattttgacctagaatcgccc-ctctacatctttttt 361  Q
    ||||||||||||||| |||||||||| |||| ||| |||||||||||||||    
T  14545144 gtggttttaggtcattttttgacctaaaatcaccctctctacatctttttt 14545094  T

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Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 10108030 - 10108138
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||||||| ||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||||    
T  10108030 gagaaactccaacttctctctaaactttctttctcctttgttcatcgaggaggggtggttttaggtcat--tttgacctagaatcacccctctacatctt 10108127  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  10108128 ttttccccttt 10108138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 10232862 - 10232972
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| ||| | |||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  10232862 gagaaactccaacttctctctaaactttctttctccttcgttcatcaaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctt 10232961  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  10232962 ttttccccttt 10232972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 9998258 - 9998369
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatatttt-gacctagaatcgcccctctacatct 356  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  9998258 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcatttttttgacctagaatcacccctctacatct 9998357  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  9998358 tttttccccttt 9998369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 364
Target Start/End: Original strand, 21431417 - 21431522
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| |||||||||| |||| ||||||||||||||    
T  21431417 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcat-ttttgacctaaaatcacccctctacatctt 21431515  T
Q  358 ttttccc 364  Q
    |||||||    
T  21431516 ttttccc 21431522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 6954992 - 6954883
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||||||||||||||||| |||||||| | ||| ||| |  || |||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  6954992 agaaactccaacttctctctaaactttctttctccttcgttcactgaggaggggtgattttaggtcattttttgacctagaatcacccctctacatcttt 6954893  T
Q  359 tttccccttt 368  Q
    ||||||||||    
T  6954892 tttccccttt 6954883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 47895942 - 47896047
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| ||||||||||| ||| |||| ||||||||||||||| |||||||||||||    
T  47895942 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttatagatcattttttgacctagaatcacccctctacatct 47896041  T
Q  357 tttttc 362  Q
    ||||||    
T  47896042 tttttc 47896047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 45568742 - 45568631
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| |||||| |||||||   || |||||||||    
T  45568742 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgatctagaataatccatctacatct 45568643  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  45568642 tttttccccttt 45568631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 33579659 - 33579765
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| |||||||||||||| |||||||| | ||| ||| ||||| || ||||||||||| ||||| ||||||||||||||| |||||||||||||    
T  33579659 agagaaacttcaacttctctctaaactttctttatccttcgttcatcgaagaagggtggttttaagtcattttttgacctagaatcacccctctacatct 33579758  T
Q  357 tttttcc 363  Q
    |||||||    
T  33579759 tttttcc 33579765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 40556503 - 40556613
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||| ||||| |||||||| |  || ||| ||||| |||||||||||||||||||| ||||||||||||||| |||||| |||||||    
T  40556503 gagaaactccaacttctttctaaactttctttctcattcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctccacatctt 40556602  T
Q  358 ttttccccttt 368  Q
    |||| ||||||    
T  40556603 tttttcccttt 40556613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 260 - 368
Target Start/End: Complemental strand, 47042348 - 47042239
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||||||||||||||||| |||| ||| | ||| ||| ||||| |||||||||||||||||||| |||| ||||| |||| |||||||||||||||    
T  47042348 agaaactccaacttctctctaaactttatttatccttcgttcatcgaggaggggtggttttaggtcattttttaacctataatcacccctctacatcttt 47042249  T
Q  359 tttccccttt 368  Q
    ||| ||||||    
T  47042248 ttttcccttt 47042239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 40487116 - 40487219
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| |||||||| ||||||||||| ||||||||||||||| | | |||||||||    
T  40487116 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtgattttaggtcattttttgacctagaatcactcttctacatct 40487215  T
Q  357 tttt 360  Q
    ||||    
T  40487216 tttt 40487219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 260 - 361
Target Start/End: Complemental strand, 48651031 - 48650929
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||||||||||||||||| |||||||| | | | ||| ||||| |||||||||||||||||||| |||||||||| |||| |||||| ||||||||    
T  48651031 agaaactccaacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctaaaatcacccctcgacatcttt 48650932  T
Q  359 ttt 361  Q
    |||    
T  48650931 ttt 48650929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 260 - 368
Target Start/End: Original strand, 32701291 - 32701400
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||||||||||||| ||| |||||||| | ||| ||| ||||| | |||||||||||||||||| |||||||||||||||  ||||||||||||||    
T  32701291 agaaactccaacttctctttaaactttctttctccttcgttcatcgaggtggggtggttttaggtcattttttgacctagaatcatccctctacatcttt 32701390  T
Q  359 tttccccttt 368  Q
     ||| |||||    
T  32701391 cttctccttt 32701400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 272 - 368
Target Start/End: Original strand, 54148793 - 54148890
Alignment:
Q  272 ttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||||||||| |||||||| | ||| || |||||| |||||||||||||||||||| |||||||||| |||| |||||||||||||||||||| ||||    
T  54148793 ttctctctaaactttctttctccttcgtcaatcgaggaggggtggttttaggtcattttttgacctacaatcacccctctacatcttttttcctcttt 54148890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 7449199 - 7449089
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||| |||||| ||| |  || ||| ||  | ||||| |||||||||||||| ||||||| |||||||| |||||||||||||    
T  7449199 agagaaactccaacttctctcaaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacatctt 7449100  T
Q  358 ttttccccttt 368  Q
    |||||| ||||    
T  7449099 ttttcctcttt 7449089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 7457341 - 7457231
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||| |||||| ||| |  || ||| ||  | ||||| |||||||||||||| ||||||| |||||||| |||||||||||||    
T  7457341 agagaaactccaacttctctcaaactttttttctctttcgttcattaaggagggctggttttaggtcattttttgacatagaatcgtccctctacatctt 7457242  T
Q  358 ttttccccttt 368  Q
    |||||| ||||    
T  7457241 ttttcctcttt 7457231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 9797825 - 9797724
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||| ||| | ||| ||| ||   |||| |||||||||||||||| ||||||||||||||| |||||||||||||    
T  9797825 agagaaactccaacttctctctaaactttatttctccttcgttcat---tgagaggtggttttaggtcattttttgacctagaatcacccctctacatct 9797729  T
Q  357 ttttt 361  Q
    |||||    
T  9797728 ttttt 9797724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 10229266 - 10229378
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatatttt--gacctagaatcgcccctctacatc 355  Q
    |||||||||||| |||||||||| |||||||| | |||  || ||||| |||||||||||||||||| | ||||  ||||||||||| || |||||||||    
T  10229266 gagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctacatc 10229365  T
Q  356 ttttttccccttt 368  Q
    |||||||||||||    
T  10229366 ttttttccccttt 10229378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 21534106 - 21534004
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||| || |||||||||| |||||||| | ||| ||||||||| || ||||||||||||||| |  |||||||||||||| |||||||||||||    
T  21534106 agagaaactctaatttctctctaaactttctttctccttcgttaatcgaggatgggtggttttaggtctt--tttgacctagaatcacccctctacatct 21534009  T
Q  357 ttttt 361  Q
    |||||    
T  21534008 ttttt 21534004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 364
Target Start/End: Complemental strand, 52923411 - 52923307
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    |||||||||||||||||||||| |||||||| | ||| ||| || || ||| ||| |||||| ||||| ||||||||||||||| |||||||||||||||    
T  52923411 agaaactccaacttctctctaaactttctttctccttcgttcattgaggagaggtagttttaagtcat-ttttgacctagaatcacccctctacatcttt 52923313  T
Q  359 tttccc 364  Q
    ||||||    
T  52923312 tttccc 52923307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 36461728 - 36461618
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    |||||||| ||  |||||||||| |||||||| | ||| ||| ||||| || | ||||||||||||||| |||||||||| | || ||||||||||||||    
T  36461728 gagaaacttcatattctctctaaactttctttctccttcgttcatcgaggatgagtggttttaggtcattttttgacctatattcacccctctacatctt 36461629  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  36461628 ttttccccttt 36461618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 31272105 - 31271993
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggg-gtggttttaggtcatattttgacctagaatcgcccctctacatc 355  Q
    ||||||||||||||||||||||||  ||||||||| ||| ||| ||||| ||||| ||| |||||||| || |||| ||||||||||  |||| ||||||    
T  31272105 agagaaactccaacttctctctaagttttctttttccttcgttcatcgaggagggtgtgattttaggttattttttaacctagaatcatccctttacatc 31272006  T
Q  356 ttttttccccttt 368  Q
    |||| ||||||||    
T  31272005 ttttgtccccttt 31271993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 35865231 - 35865121
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| |||||||||||||| |||||||| | ||| |||  |||| |||||||||||||||||||| |||||| ||| ||||  || |||||||||    
T  35865231 agagaaacttcaacttctctctaaactttctttctccttcgttcctcgaggaggggtggttttaggtcat-ttttgatctaaaatcatccttctacatct 35865133  T
Q  357 tttttccccttt 368  Q
    ||||||| ||||    
T  35865132 tttttcctcttt 35865121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 43016646 - 43016759
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttacttt-gttaatcgatgaggggtggttttaggtca--tattttgacctagaatcgcccctctacat 354  Q
    |||||||||| ||||||||||||| |||  |||  |||| ||| ||||| || ||||||||||||||||  | ||||||||||||||| |||||| || |    
T  43016646 agagaaactctaacttctctctaaattttctttctctttcgttcatcgaggaagggtggttttaggtcagttcttttgacctagaatcacccctccacgt 43016745  T
Q  355 cttttttccccttt 368  Q
    ||||||||||||||    
T  43016746 cttttttccccttt 43016759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 258 - 342
Target Start/End: Original strand, 38545626 - 38545711
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatc 342  Q
    ||||||||| |||||||||||||| |||||||| | ||| ||| || || ||| |||||||||||||||| |||||||||||||||    
T  38545626 agagaaacttcaacttctctctaaactttctttctccttcgttcattgaggagtggtggttttaggtcattttttgacctagaatc 38545711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 12050946 - 12050835
Alignment:
Q  258 agagaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| ||| |||| | ||| ||| ||| | || | ||||||||| || || ||||||  ||||||| |||||||||||||    
T  12050946 agagaaactccaacttctctctaaattttctttctccttcgttcatcaaggatgtgtggttttaagttattttttgatttagaatcacccctctacatct 12050847  T
Q  357 tttttccccttt 368  Q
    | ||||||||||    
T  12050846 tctttccccttt 12050835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 12150080 - 12149976
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||| ||| |||||||||| ||| ||||||||  | | |||| ||||| |||||||||||||| || || |||||||||| |||| |||||||||| ||    
T  12150080 agagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccctctacacct 12149981  T
Q  357 ttttt 361  Q
    |||||    
T  12149980 ttttt 12149976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 21290063 - 21290007
Alignment:
Q  311 ggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttcccctt 367  Q
    |||| ||||||||||  ||||||||||||||| ||||||| ||||||||||||||||    
T  21290063 ggtgattttaggtcaatttttgacctagaatcacccctctgcatcttttttcccctt 21290007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 43488835 - 43488781
Alignment:
Q  309 ggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccc 364  Q
    ||||||| |||||||| | ||||||||||||||| |||||||||||||||||||||    
T  43488835 ggggtgggtttaggtctt-ttttgacctagaatcacccctctacatcttttttccc 43488781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 364
Target Start/End: Original strand, 37040633 - 37040669
Alignment:
Q  328 ttttgacctagaatcgcccctctacatcttttttccc 364  Q
    ||||||||||||||| |||||||||||||||||||||    
T  37040633 ttttgacctagaatcacccctctacatcttttttccc 37040669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 29239183 - 29239232
Alignment:
Q  311 ggtggttttaggtcatattttgacctagaatcgcccctctacatctttttt 361  Q
    |||||||||||||||| |||||| |||||||| |||| |||||||||||||    
T  29239183 ggtggttttaggtcattttttgatctagaatcacccc-ctacatctttttt 29239232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 8914546 - 8914599
Alignment:
Q  308 aggggtggttttaggtcatattttgacctagaatcgcccctctacatctttttt 361  Q
    ||||||| ||||||||||  ||||||||||||||  ||||||| ||||||||||    
T  8914546 aggggtgattttaggtcaatttttgacctagaataacccctctgcatctttttt 8914599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 361
Target Start/End: Complemental strand, 629160 - 629100
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttttt 361  Q
    ||||| ||||||||||||||||||||  ||||||||| ||||  || ||| ||||||||||    
T  629160 atcgaggaggggtggttttaggtcattctttgacctaaaatcatccttctgcatctttttt 629100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 4821649 - 4821709
Alignment:
Q  308 aggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||||||||||||||||| |||||||||| |||| | ||||| ||||  |||||| ||||    
T  4821649 aggggtggttttaggtcattttttgacctataatcactcctctgcatccattttcctcttt 4821709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 36910868 - 36910828
Alignment:
Q  328 ttttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    |||| |||||||||| | |||||||||||||||||||||||    
T  36910868 tttttacctagaatcactcctctacatcttttttccccttt 36910828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 258 - 364
Target Start/End: Original strand, 38597588 - 38597695
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| ||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  38597588 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggttattttttgacctagaatcacccctctacatct 38597687  T
Q  357 tttttccc 364  Q
    ||||||||    
T  38597688 tttttccc 38597695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 6012435 - 6012325
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| || || |||||||||||||||||||| ||||||| ||||||| ||||||||||||||    
T  6012435 gagaaactccaacttctctctaaactttctttctccttcgttcattgaggaggggtggttttaggtcattttttgacatagaatcacccctctacatctt 6012336  T
Q  358 ttttccccttt 368  Q
    |||| ||||||    
T  6012335 tttttcccttt 6012325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 259 - 364
Target Start/End: Original strand, 13007020 - 13007126
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| ||||| ||| |||||||||||||||| ||||||||||||||| |||||||||| |||    
T  13007020 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctctacacctt 13007119  T
Q  358 ttttccc 364  Q
    |||||||    
T  13007120 ttttccc 13007126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 34945213 - 34945323
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    |||||||||||| |||||||||| |||||||| | ||| ||| ||||| || || |||||||||||||| ||||||||||||||| ||| ||||||||||    
T  34945213 gagaaactccaaattctctctaaactttctttctccttcgttcatcgaagaaggatggttttaggtcattttttgacctagaatcacccttctacatctt 34945312  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  34945313 ttttccccttt 34945323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 38007148 - 38007251
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||| | ||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  38007148 agagaaactcaatcttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctcgaatcacccctctacatct 38007247  T
Q  357 tttt 360  Q
    ||||    
T  38007248 tttt 38007251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 364
Target Start/End: Complemental strand, 9114022 - 9113916
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||| ||||||||||||| |||||||| |  || ||| ||||| |||||||| ||||||||||| |||| |||||||||| ||||||||||||||    
T  9114022 gagaaactctaacttctctctaaactttctttctctttcgttcatcgaggaggggtgattttaggtcattttttaacctagaatcacccctctacatctt 9113923  T
Q  358 ttttccc 364  Q
    |||||||    
T  9113922 ttttccc 9113916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 261 - 369
Target Start/End: Original strand, 25979951 - 25980060
Alignment:
Q  261 gaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    ||||||||||||||||||||| |||||||| | ||| ||| ||||| || ||||||||| ||||||| ||||||||| ||||  ||| ||||||||||||    
T  25979951 gaaactccaacttctctctaaactttctttctccttcgttcatcgaggatgggtggtttcaggtcattttttgacctggaattacccttctacatctttt 25980050  T
Q  360 ttcccctttg 369  Q
    ||||||||||    
T  25980051 ttcccctttg 25980060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 269 - 368
Target Start/End: Complemental strand, 31392044 - 31391943
Alignment:
Q  269 aacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt-tcccct 366  Q
    ||||||||||||| |||||||| | | | ||| ||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||    
T  31392044 aacttctctctaaactttctttctccatcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcacccctctacatctttttctcccct 31391945  T
Q  367 tt 368  Q
    ||    
T  31391944 tt 31391943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 26825220 - 26825332
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatatttt--gacctagaatcgcccctctacatc 355  Q
    |||||||||||| |||||||||| |||||||| | |||  || ||||| |||||||||||||||||| | ||||  ||||||||||| || |||||||||    
T  26825220 gagaaactccaatttctctctaaactttctttctccttctttcatcgaggaggggtggttttaggtcttttttttggacctagaatcaccactctacatc 26825319  T
Q  356 ttttttccccttt 368  Q
    |||||||||||||    
T  26825320 ttttttccccttt 26825332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 7036018 - 7036129
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||| ||||||||||||| |||||||| | |||  || ||| | | |||||||||||||||||| |||||||||| |||| | | |||||||||    
T  7036018 agagaaactcaaacttctctctaaactttctttctccttcattcatcaaggtggggtggttttaggtcattttttgacctaaaatcactcatctacatct 7036117  T
Q  357 tttttccccttt 368  Q
    ||||||| ||||    
T  7036118 tttttcctcttt 7036129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 26878376 - 26878266
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| |||||||||||||| |||||||| | |||  || ||||| ||| |||||||||| ||||| |||||| |||||||| || ||||||||||    
T  26878376 agagaaacttcaacttctctctaaactttctttctccttcattcatcgaggagaggtggttttatgtcat-ttttgatctagaatcacctctctacatct 26878278  T
Q  357 tttttccccttt 368  Q
    |||| |||||||    
T  26878277 ttttcccccttt 26878266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 35850575 - 35850685
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||| ||||| |||||||||| |||| ||| |  || ||| ||||| |||||||||||||||||| | ||||||||||||||| ||| ||||||| |    
T  35850575 agagaaagtccaatttctctctaaactttatttctcattcgtttatcgaggaggggtggttttaggtctt-ttttgacctagaatcacccatctacatat 35850673  T
Q  357 tttttccccttt 368  Q
    ||||| ||||||    
T  35850674 ttttttcccttt 35850685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 4770915 - 4770992
Alignment:
Q  244 tagttttctaccgaagagaaactccaacttctctct-aactttctttttactttgttaatcgatgaggggtggttttag 321  Q
    |||||||||||||| ||||||||| ||||||||||| |||||||||| | ||| ||||||||| |||||||| ||||||    
T  4770915 tagttttctaccga-gagaaactctaacttctctctaaactttctttcttcttcgttaatcgaggaggggtgattttag 4770992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 364
Target Start/End: Complemental strand, 8096792 - 8096688
Alignment:
Q  260 agaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttt 358  Q
    ||||| |||||||||||||||| |||| ||| | ||| ||| || || ||||  |||||||||||||| ||||||||||||||| ||||||||  |||||    
T  8096792 agaaattccaacttctctctaaactttttttcttcttcgtttattgaggaggattggttttaggtcat-ttttgacctagaatcacccctctatttcttt 8096694  T
Q  359 tttccc 364  Q
    ||||||    
T  8096693 tttccc 8096688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 11074198 - 11074087
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgag-gggtggttttaggtcatattttgacctagaatcgcccctctacatc 355  Q
    |||||||||||||||| ||||||| |||||||| | | | ||| ||||| ||| |||||||||||||| || |||||||||||||||  | |||||| ||    
T  11074198 agagaaactccaacttttctctaaactttctttctccctcgttcatcgaggagagggtggttttaggttat-ttttgacctagaatcatcactctacgtc 11074100  T
Q  356 ttttttccccttt 368  Q
    |||||| ||||||    
T  11074099 tttttttcccttt 11074087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 2979566 - 2979499
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| ||||||||||  |||||||||| |||| ||||||| |||||||||||| ||||    
T  2979566 atcgaggaggggtgattttaggtcaatttttgacctataatcacccctctgcatcttttttcctcttt 2979499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 39567130 - 39567197
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| ||||||||||  ||||||||||||||| | ||||| ||||||||| |||||||    
T  39567130 atcgaggaggggtgattttaggtcaatttttgacctagaatcacgcctctgcatctttttcccccttt 39567197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 10722607 - 10722676
Alignment:
Q  301 atcgatgaggggtggttttaggtcatatttt-gacctagaatcgcccc-tctacatcttttttccccttt 368  Q
    ||||| ||| |||||||||||||||| |||| ||||||||||| |||| |||||||||||||||| ||||    
T  10722607 atcgaggagaggtggttttaggtcatttttttgacctagaatcaccccctctacatcttttttcctcttt 10722676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 372
Target Start/End: Original strand, 6216696 - 6216800
Alignment:
Q  269 aacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttcccctt 367  Q
    ||||||||||||| |||| ||| |  || ||| ||||| || |||||||||||||||||  ||||||||| ||||  || ||||||| | ||||||||||    
T  6216696 aacttctctctaaactttatttctcattcgttcatcgaggatgggtggttttaggtcattctttgacctaaaatcatccatctacatttgttttcccctt 6216795  T
Q  368 tgctt 372  Q
    |||||    
T  6216796 tgctt 6216800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 24230085 - 24229979
Alignment:
Q  258 agagaaactccaacttctctct--aactttctttttactttgttaatcgatgaggggtggttttagg-tcatattttg-acctagaatcgcccctctaca 353  Q
    ||||||||||||||||||||||  |||||||||| | ||| ||| ||||| ||| || ||||||||| | || ||||| ||||| |||| ||||||||||    
T  24230085 agagaaactccaacttctctctaaaactttctttgttcttcgttcatcgaggagtggaggttttaggtttattttttgtacctaaaatcacccctctaca 24229986  T
Q  354 tcttttt 360  Q
    | |||||    
T  24229985 tattttt 24229979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 360
Target Start/End: Original strand, 14211076 - 14211126
Alignment:
Q  310 gggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    ||||| ||||||||||  ||||||||||||||| ||||||| |||||||||    
T  14211076 gggtgattttaggtcaatttttgacctagaatcacccctctgcatcttttt 14211126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 11867524 - 11867575
Alignment:
Q  310 gggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttc 362  Q
    |||| |||||||||||| |||||||||| |||| || ||||||||||||||||    
T  11867524 gggtagttttaggtcat-ttttgacctaaaatcaccactctacatcttttttc 11867575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 258 - 321
Target Start/End: Complemental strand, 11977235 - 11977171
Alignment:
Q  258 agagaaactccaacttctctct-aactttctttttactttgttaatcgatgaggggtggttttag 321  Q
    |||||||||| ||||||||||| |||||||||| | ||| ||| |||||  ||||||||||||||    
T  11977235 agagaaactctaacttctctctaaactttctttctccttcgttcatcgagaaggggtggttttag 11977171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 13421792 - 13421843
Alignment:
Q  316 ttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||||||||| ||||||| ||||||| ||| ||||||||||||| |||||||    
T  13421792 ttttaggtcattttttgacatagaatcaccc-tctacatctttttcccccttt 13421843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 7e-28; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 45415353 - 45415464
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| |||||||||| ||| |||||||| | ||| ||| ||||| |||||||||||||||||||| |||||| |||||||| |||||||||||||    
T  45415353 agagaaacttcaacttctctttaaactttctttcttcttcgtttatcgaggaggggtggttttaggtcattttttgatctagaatcacccctctacatct 45415452  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  45415453 tttttccccttt 45415464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 31983974 - 31984085
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||||||| | ||||||| ||| | ||| |||||||||||||||| ||||||||||||| | || ||||||||||    
T  31983974 agagaaactccaacttctctctaaactttctttcttctttgttcatcaaggagaggtggttttaggtcattttttgacctagaagcacctctctacatct 31984073  T
Q  357 tttttccccttt 368  Q
    ||||| ||||||    
T  31984074 ttttttcccttt 31984085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 29738934 - 29738831
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||| ||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||  |||| |||||||||| |||||||||||||    
T  29738934 agagaaactccaacatctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcaattttttacctagaatcacccctctacatct 29738835  T
Q  357 tttt 360  Q
    ||||    
T  29738834 tttt 29738831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 34878569 - 34878463
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||| ||| |||||||| |  || ||| ||||| |||||||||||||||||||| ||||||||||||||| | | |||||||||    
T  34878569 agagaaactccaacttctctttaaactttctttctctttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcactcatctacatct 34878470  T
Q  357 tttttcc 363  Q
    |||||||    
T  34878469 tttttcc 34878463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 234 - 368
Target Start/End: Complemental strand, 7337984 - 7337850
Alignment:
Q  234 tagccggctttagttttctaccgaagagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttg 332  Q
    ||||||||  ||||||||||  ||| ||||||| |||||||||||||| |||||||| | ||| ||| ||||| ||||| ||||| || ||||| |||||    
T  7337984 tagccggccctagttttctagtgaa-agaaacttcaacttctctctaaactttctttctccttcgttcatcgaggagggatggttctatgtcattttttg 7337886  T
Q  333 acctagaatcgcccctctacatcttttttccccttt 368  Q
    | |||||||| |||||||||||||||||||| ||||    
T  7337885 atctagaatcacccctctacatcttttttcctcttt 7337850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 11462746 - 11462635
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| ||| |||||||||| |||||||| | ||| ||| || || |||||||| |||||||| || ||||||||||||||| ||||||| |||||    
T  11462746 agagaaacttcaatttctctctaaactttctttctccttcgttcattgacgaggggtgattttaggttattttttgacctagaatcacccctctgcatct 11462647  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  11462646 tttttccccttt 11462635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 10776758 - 10776654
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||||||| |||||||||| |||||||| | |||  || ||||| || |||||||||||| |||| ||||||||||||||| ||| |||||||||    
T  10776758 agagaaactccaatttctctctaaactttctttctccttcattcatcgaggaagggtggttttagatcattttttgacctagaatcacccatctacatct 10776659  T
Q  357 ttttt 361  Q
    |||||    
T  10776658 ttttt 10776654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 5983630 - 5983741
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||  ||||||||||||| |||| ||| | ||| ||| ||||| ||||| ||||||||| |||| ||||||||||||||| | | |||||||||    
T  5983630 agagaaactttaacttctctctaaactttatttctccttcgttcatcgaggagggatggttttagatcattttttgacctagaatcactcgtctacatct 5983729  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  5983730 tttttccccttt 5983741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 263 - 364
Target Start/End: Complemental strand, 7837059 - 7836957
Alignment:
Q  263 aactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttttt 361  Q
    ||||||||||||||||||| | |||||| |  || ||| ||||| || ||||||||||||||||| |||||| |||||||| |||||| |||||||||||    
T  7837059 aactccaacttctctctaaaccttctttctctttcgttcatcgaggaagggtggttttaggtcattttttgatctagaatcacccctcgacatctttttt 7836960  T
Q  362 ccc 364  Q
    |||    
T  7836959 ccc 7836957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 337
Target Start/End: Complemental strand, 35484676 - 35484596
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgaccta 337  Q
    |||||||||||||||||||||||| |||||||| | ||| ||| ||||| ||||||||||| |||||||| ||||||||||    
T  35484676 agagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttgtaggtcattttttgaccta 35484596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 368
Target Start/End: Original strand, 14872433 - 14872544
Alignment:
Q  258 agagaaactccaacttctctct-aactttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||| ||| |||||||||| | |||  || |||||  ||| |||||||| |||||| ||||||| ||||||| | |||||||||||    
T  14872433 agagaaactccaacttctttctgaactttctttcttcttcattcatcgagaaggtgtggttttcggtcattttttgacttagaatcactcctctacatct 14872532  T
Q  357 tttttccccttt 368  Q
    ||||| ||||||    
T  14872533 ttttttcccttt 14872544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 15435170 - 15435063
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||||||||||||||| || | |||||| | |||  || ||| | |||||| ||||||||||||| |||||| ||||||||  ||||||||||||    
T  15435170 agagaaactccaacttctctcaaaaccttctttcttcttcattcatcaaggaggggcggttttaggtcattttttgatctagaatcaaccctctacatct 15435071  T
Q  357 tttttccc 364  Q
    ||||||||    
T  15435070 tttttccc 15435063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 49626748 - 49626815
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| ||||||||||||||||||||  ||||||||| |||| ||||||| |||||||||||||||||    
T  49626748 atcgaggaggggtggttttaggtcattctttgacctaaaatcacccctctgcatcttttttccccttt 49626815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 41176977 - 41177045
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcat 326  Q
    ||||||||||||||||||||||| |||||||| | ||| ||| ||||| ||||||||||||||||||||    
T  41176977 gagaaactccaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcat 41177045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Original strand, 18939116 - 18939219
Alignment:
Q  258 agagaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| || ||||||||||| ||| |||| | |||  |||||||| ||| |||||||||||||||| |||||| |||||||| || |||| |||||    
T  18939116 agagaaacttcaccttctctctaagttttctttctccttcattaatcgaggagaggtggttttaggtcattttttgatctagaatcacctctctgcatct 18939215  T
Q  357 tttt 360  Q
    ||||    
T  18939216 tttt 18939219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 36894495 - 36894428
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| ||||||||||| || ||||| |||||||||||| || |||||||||||||||||||| ||||    
T  36894495 atcgaagaggggtggttctaagtcattttttgacctagagtcacccctctacatcttttttcctcttt 36894428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 282 - 360
Target Start/End: Original strand, 32394818 - 32394896
Alignment:
Q  282 ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||| |||||||  |||||| |||||||||    
T  32394818 ctttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacttagaatcatccctctgcatcttttt 32394896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 235 - 359
Target Start/End: Original strand, 1742053 - 1742177
Alignment:
Q  235 agccggctttagttttctaccgaagagaaactccaacttctctctaactttctttttacttt-gttaatcgatgaggggtggttttaggtcatattttga 333  Q
    ||||||| |||||||||||  || ||||||||| ||||||| |||||  ||| |||  |||| ||| ||| | ||  |||||||||||||||| ||||||    
T  1742053 agccggccttagttttctagtga-gagaaactcaaacttctttctaaacttcctttctctttcgttcatcaaggaatggtggttttaggtcattttttga 1742151  T
Q  334 cctagaatcgcccctctacatctttt 359  Q
    ||||||||| ||||||| ||||||||    
T  1742152 cctagaatcacccctctccatctttt 1742177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 35462335 - 35462224
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttg-acctagaatcgcccctctacatct 356  Q
    ||||||||| ||||| ||||||| |||||||| | ||| ||| || ||  | ||||||||||||||||| ||||  || |||||||  ||||||||||||    
T  35462335 gagaaactctaacttatctctaaactttctttctccttcgtttattgagaatgggtggttttaggtcattttttttacatagaatcatccctctacatct 35462236  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  35462235 tttttccccttt 35462224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 313 - 360
Target Start/End: Original strand, 45789415 - 45789462
Alignment:
Q  313 tggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    |||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  45789415 tggttttaggtcattttttgacctagaatcacccctctgcatcttttt 45789462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 316 - 362
Target Start/End: Complemental strand, 23291881 - 23291835
Alignment:
Q  316 ttttaggtcatattttgacctagaatcgcccctctacatcttttttc 362  Q
    ||||||||||| ||||||||||||||| |||||| ||||||||||||    
T  23291881 ttttaggtcattttttgacctagaatcacccctcgacatcttttttc 23291835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 359
Target Start/End: Original strand, 3228114 - 3228166
Alignment:
Q  307 gaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    |||||||||||||||||||| |||| ||||| |||| ||| ||||||||||||    
T  3228114 gaggggtggttttaggtcattttttaacctacaatcacccatctacatctttt 3228166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 360
Target Start/End: Original strand, 34528568 - 34528616
Alignment:
Q  312 gtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    ||||||||| ||||| ||||||||||||||| ||||||| |||||||||    
T  34528568 gtggttttatgtcattttttgacctagaatcacccctctgcatcttttt 34528616  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 51916950 - 51916846
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||| ||| || ||||||| |||||||| | ||| ||| || || ||||||||||||||||  || |||||||||| |||| | | |||||||||    
T  51916950 agagaaacttcaatttttctctaaactttctttctccttcgttcatagaggaggggtggttttaggctattttttgacctaaaatcactcatctacatct 51916851  T
Q  357 ttttt 361  Q
    |||||    
T  51916850 ttttt 51916846  T

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Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 48750028 - 48750094
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| | |||||||| |||||||||||||||| | ||| | |||||||||||||||||    
T  48750028 atcgaggaggggtgatattaggtcaaattttgacctagaatcactcct-tgcatcttttttccccttt 48750094  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 15836041 - 15836090
Alignment:
Q  311 ggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    |||||||||||||||| ||||||||||||||| || || ||||| |||||    
T  15836041 ggtggttttaggtcattttttgacctagaatcaccgctatacatattttt 15836090  T

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Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 12635016 - 12635068
Alignment:
Q  312 gtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccc 364  Q
    ||||||||||||||| || ||||||| |||| ||||| | |||||||||||||    
T  12635016 gtggttttaggtcattttctgacctataatcacccctttgcatcttttttccc 12635068  T

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Target: scaffold0127 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 232 - 360
Target Start/End: Original strand, 15258 - 15386
Alignment:
Q  232 tttagccggctttagttttctaccgaagagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattt 330  Q
    ||||||||||  ||||||||||  || |||||||| |||||||||||||| |||||||| | ||| |||  |||| |||||||||||||||||||| |||    
T  15258 tttagccggccctagttttctagtga-gagaaacttcaacttctctctaaactttctttctccttcgttcttcgaggaggggtggttttaggtcattttt 15356  T
Q  331 tgacctagaatcgcccctctacatcttttt 360  Q
    |||||||||||| |||||||||||||||||    
T  15357 tgacctagaatcacccctctacatcttttt 15386  T

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Target: scaffold0884 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 2270 - 2159
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||| ||| | ||| ||| ||||| |||| ||||||||| ||||| |||||| |||||||| |||||||||||||    
T  2270 agagaaactccaacttctctctaaactttttttctccttcgttcatcgaggaggagtggttttaagtcattttttgatctagaatcacccctctacatct 2171  T
Q  357 tttttccccttt 368  Q
    ||||||||||||    
T  2170 tttttccccttt 2159  T

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Target: scaffold0017 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 33046 - 32935
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||| ||||||||||||| |||||||| | ||| ||| ||||| |||| ||||||||||||||| ||||||| ||||||| |||||||||||||    
T  33046 agagaaactctaacttctctctaaactttctttcttcttcgtttatcgaggaggagtggttttaggtcattttttgacatagaatcacccctctacatct 32947  T
Q  357 tttttccccttt 368  Q
    ||| ||||||||    
T  32946 tttgtccccttt 32935  T

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Target: scaffold0088 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 368
Target Start/End: Original strand, 50578 - 50688
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    ||||||||||||||||| ||||| |||||||| | ||| ||| || || |||||||| ||||||||||  |||||||||||||||  |||||||||||||    
T  50578 gagaaactccaacttctttctaaactttctttctccttcgttcattgaggaggggtgattttaggtcactttttgacctagaatcatccctctacatctt 50677  T
Q  358 ttttccccttt 368  Q
    |||||||||||    
T  50678 ttttccccttt 50688  T

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Target: scaffold0026 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 368
Target Start/End: Complemental strand, 72161 - 72051
Alignment:
Q  259 gagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctt 357  Q
    |||||||| |||||||||||||| |||||||| | ||| ||| ||||| |||||||||||||||||||| ||||||||||||||| ||  ||| ||||||    
T  72161 gagaaacttcaacttctctctaaactttctttctccttcgttcatcgaggaggggtggttttaggtcattttttgacctagaatcaccattcttcatctt 72062  T
Q  358 ttttccccttt 368  Q
    ||| |||||||    
T  72061 tttcccccttt 72051  T

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Target: scaffold0445 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 261 - 364
Target Start/End: Original strand, 1138 - 1242
Alignment:
Q  261 gaaactccaacttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    |||||| |||||||||||||| ||| |||| | ||| ||| ||||| ||| |||||||||||||||| ||||||||||||||| ||||||||| ||||||    
T  1138 gaaacttcaacttctctctaaattttctttctccttcgttcatcgaggagaggtggttttaggtcattttttgacctagaatcacccctctacttctttt 1237  T
Q  360 ttccc 364  Q
    |||||    
T  1238 ttccc 1242  T

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Target: scaffold0219 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 364
Target Start/End: Complemental strand, 15136 - 15029
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||||||||||| |||||||||| |||||||| | |||  || ||||| || | ||||  |||||| || ||||||||||||||| || ||||||||||    
T  15136 agagaaactccaatttctctctaaactttctttctccttcattcatcgaggatgtgtggggttaggttattttttgacctagaatcaccactctacatct 15037  T
Q  357 tttttccc 364  Q
    ||||||||    
T  15036 tttttccc 15029  T

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Target: scaffold0087 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 301 - 359
Target Start/End: Complemental strand, 25583 - 25525
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    ||||| |||||||||||||| ||||| |||||||||| |||| ||||||||||||||||    
T  25583 atcgaggaggggtggttttatgtcattttttgacctataatcacccctctacatctttt 25525  T

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Target: scaffold0634 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 361
Target Start/End: Original strand, 8305 - 8409
Alignment:
Q  258 agagaaactccaacttctctctaa-ctttctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    ||||| ||| |||||||||| ||| ||||||||  | | |||| ||||| |||||||||||||| || || |||||||||| |||| |||||||||| ||    
T  8305 agagacacttcaacttctctataaactttctttcaaatctgttcatcgaggaggggtggttttaagttattttttgacctataatcacccctctacacct 8404  T
Q  357 ttttt 361  Q
    |||||    
T  8405 ttttt 8409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 361
Target Start/End: Complemental strand, 58377 - 58273
Alignment:
Q  258 agagaaactccaacttctctctaactttctttttactttgt-taatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatct 356  Q
    |||||||||||||||||||||||| |||   ||| ||||   |  |||| |||||||||||||||||||| |||||||||| |||| ||||||| ||||     
T  58377 agagaaactccaacttctctctaagttttcgttttctttcactcgtcgaggaggggtggttttaggtcattttttgacctaaaatcacccctctgcatcc 58278  T
Q  357 ttttt 361  Q
    |||||    
T  58277 ttttt 58273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 1928 - 1861
Alignment:
Q  301 atcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatcttttttccccttt 368  Q
    ||||| |||||||| | ||||||||  ||||||||||||||| || |||| |||||||||||||||||    
T  1928 atcgaggaggggtgatattaggtcaatttttgacctagaatcacctctctgcatcttttttccccttt 1861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 359
Target Start/End: Original strand, 7521 - 7610
Alignment:
Q  271 cttctctctaacttt-ctttttactttgttaatcgatgaggggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    ||||||||||| ||| |||| | |||| || ||||| ||||| |||||||||||||| ||||||||||||||| | | ||| ||||||||    
T  7521 cttctctctaagttttctttctcctttattcatcgaggagggatggttttaggtcattttttgacctagaatcactcatctgcatctttt 7610  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 71529 - 71479
Alignment:
Q  308 aggggtggttttaggtcatattttgacctagaatcgcccctctacatctttt 359  Q
    ||||||||||||||||||| |||||||||| |||| ||||||||||| ||||    
T  71529 aggggtggttttaggtcat-ttttgacctaaaatcacccctctacatatttt 71479  T

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Target: scaffold0492 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 12761 - 12810
Alignment:
Q  311 ggtggttttaggtcatattttgacctagaatcgcccctctacatcttttt 360  Q
    |||||||||||||||| ||||||||||||||| || || ||||| |||||    
T  12761 ggtggttttaggtcattttttgacctagaatcaccgctatacatattttt 12810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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