View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1001_low_4 (Length: 247)

Name: NF1001_low_4
Description: NF1001
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1001_low_4
NF1001_low_4
[»] chr1 (26 HSPs)
chr1 (47-157)||(13765539-13765649)
chr1 (47-135)||(16706498-16706589)
chr1 (47-135)||(30748956-30749044)
chr1 (47-135)||(30770407-30770495)
chr1 (55-135)||(15393326-15393405)
chr1 (47-135)||(32800287-32800375)
chr1 (58-148)||(14760047-14760136)
chr1 (57-135)||(22679499-22679577)
chr1 (57-135)||(22679342-22679420)
chr1 (57-135)||(30746778-30746856)
chr1 (57-135)||(30768229-30768307)
chr1 (59-127)||(16706348-16706416)
chr1 (58-135)||(15393150-15393227)
chr1 (47-135)||(30749103-30749191)
chr1 (47-135)||(30770554-30770642)
chr1 (93-135)||(39785225-39785267)
chr1 (62-107)||(8819369-8819414)
chr1 (57-134)||(20171395-20171471)
chr1 (75-135)||(51900119-51900179)
chr1 (47-134)||(23485676-23485763)
chr1 (68-135)||(23485856-23485923)
chr1 (76-135)||(35215038-35215096)
chr1 (69-135)||(23528233-23528299)
chr1 (87-116)||(14759976-14760005)
chr1 (63-116)||(30746940-30746993)
chr1 (63-116)||(30768391-30768444)
[»] chr8 (24 HSPs)
chr8 (63-135)||(31212463-31212535)
chr8 (57-135)||(31212318-31212396)
chr8 (47-135)||(9861573-9861661)
chr8 (59-135)||(6906269-6906344)
chr8 (57-135)||(6906446-6906524)
chr8 (59-135)||(33892041-33892117)
chr8 (47-135)||(10070022-10070110)
chr8 (47-135)||(15229621-15229709)
chr8 (47-135)||(33892199-33892287)
chr8 (64-134)||(14148402-14148472)
chr8 (59-115)||(14148860-14148916)
chr8 (64-135)||(8791887-8791958)
chr8 (47-118)||(8791732-8791803)
chr8 (89-135)||(5879880-5879926)
chr8 (59-133)||(10069858-10069932)
chr8 (57-115)||(27503663-27503721)
chr8 (61-135)||(29242437-29242510)
chr8 (59-120)||(7766359-7766420)
chr8 (70-135)||(20691279-20691343)
chr8 (57-114)||(36874336-36874393)
chr8 (56-116)||(37037275-37037335)
chr8 (64-135)||(5880043-5880114)
chr8 (57-135)||(29242845-29242922)
chr8 (57-135)||(39484729-39484806)
[»] chr7 (28 HSPs)
chr7 (47-135)||(19105417-19105505)
chr7 (57-135)||(7760770-7760848)
chr7 (59-135)||(9686460-9686536)
chr7 (62-135)||(6036553-6036626)
chr7 (47-135)||(29635240-29635327)
chr7 (65-135)||(3555370-3555440)
chr7 (57-135)||(7760613-7760691)
chr7 (47-135)||(12821184-12821272)
chr7 (47-135)||(37081257-37081344)
chr7 (57-135)||(20165014-20165092)
chr7 (64-137)||(18881115-18881190)
chr7 (47-135)||(21657462-21657550)
chr7 (47-135)||(31198304-31198391)
chr7 (57-135)||(23797217-23797295)
chr7 (57-135)||(31172348-31172426)
chr7 (59-127)||(15329870-15329939)
chr7 (62-135)||(31198475-31198548)
chr7 (57-135)||(20164624-20164702)
chr7 (60-135)||(9686297-9686373)
chr7 (57-115)||(19105281-19105338)
chr7 (61-135)||(21657302-21657376)
chr7 (63-132)||(47741036-47741105)
chr7 (76-135)||(8130092-8130149)
chr7 (57-117)||(29635676-29635736)
chr7 (76-119)||(35304242-35304285)
chr7 (61-135)||(35054450-35054524)
chr7 (57-135)||(35303859-35303937)
chr7 (61-102)||(23797100-23797141)
[»] chr5 (25 HSPs)
chr5 (48-135)||(22297767-22297854)
chr5 (47-135)||(22297925-22298013)
chr5 (57-135)||(25906130-25906208)
chr5 (57-135)||(29673296-29673373)
chr5 (47-135)||(2344627-2344715)
chr5 (57-119)||(20510358-20510420)
chr5 (47-135)||(6843087-6843175)
chr5 (47-135)||(17047860-17047948)
chr5 (57-141)||(20510468-20510551)
chr5 (47-135)||(25905963-25906051)
chr5 (88-135)||(2846578-2846625)
chr5 (88-135)||(2858415-2858462)
chr5 (57-140)||(29673711-29673794)
chr5 (60-135)||(13657554-13657629)
chr5 (56-135)||(38299116-38299195)
chr5 (63-117)||(12272525-12272579)
chr5 (61-135)||(17048032-17048105)
chr5 (87-135)||(2344511-2344559)
chr5 (64-116)||(38298718-38298770)
chr5 (57-112)||(8086710-8086765)
chr5 (97-127)||(11929301-11929331)
chr5 (57-135)||(13657722-13657800)
chr5 (57-135)||(24490699-24490776)
chr5 (61-135)||(38900228-38900301)
chr5 (63-115)||(5161081-5161132)
[»] chr6 (14 HSPs)
chr6 (57-135)||(13340448-13340526)
chr6 (57-127)||(13340616-13340686)
chr6 (47-135)||(34637587-34637675)
chr6 (53-135)||(34637430-34637511)
chr6 (56-135)||(12289985-12290064)
chr6 (57-135)||(31298897-31298975)
chr6 (58-135)||(7359593-7359670)
chr6 (47-134)||(24704313-24704400)
chr6 (47-116)||(30519704-30519773)
chr6 (63-135)||(403312-403383)
chr6 (57-135)||(24704755-24704831)
chr6 (60-132)||(6190577-6190648)
chr6 (59-141)||(10284377-10284459)
chr6 (56-135)||(10284221-10284297)
[»] chr4 (21 HSPs)
chr4 (47-149)||(54164629-54164730)
chr4 (59-135)||(13552837-13552913)
chr4 (59-135)||(54164471-54164547)
chr4 (57-132)||(17431133-17431208)
chr4 (63-117)||(34665003-34665057)
chr4 (63-128)||(17430725-17430790)
chr4 (87-135)||(32185286-32185334)
chr4 (61-135)||(33752710-33752784)
chr4 (60-135)||(13552674-13552750)
chr4 (47-115)||(32186630-32186698)
chr4 (63-115)||(34665157-34665209)
chr4 (59-135)||(53343710-53343786)
chr4 (61-135)||(7513532-7513606)
chr4 (47-113)||(17615992-17616058)
chr4 (47-115)||(28687624-28687692)
chr4 (72-115)||(33752327-33752370)
chr4 (53-135)||(16854796-16854878)
chr4 (63-113)||(17168814-17168864)
chr4 (63-113)||(17174386-17174436)
chr4 (61-135)||(17250467-17250541)
chr4 (59-115)||(31078953-31079008)
[»] chr3 (26 HSPs)
chr3 (61-135)||(30172076-30172150)
chr3 (47-135)||(30430275-30430363)
chr3 (45-135)||(30173613-30173703)
chr3 (62-135)||(4304325-4304398)
chr3 (70-131)||(27614023-27614084)
chr3 (64-135)||(4475110-4475181)
chr3 (57-135)||(2928099-2928177)
chr3 (57-135)||(45405073-45405151)
chr3 (57-135)||(28725684-28725764)
chr3 (57-123)||(34502619-34502685)
chr3 (46-135)||(4304148-4304237)
chr3 (63-135)||(6931119-6931191)
chr3 (75-135)||(19279905-19279965)
chr3 (47-115)||(43907882-43907950)
chr3 (57-133)||(44094315-44094391)
chr3 (53-115)||(8896036-8896098)
chr3 (60-101)||(29491409-29491450)
chr3 (63-127)||(4475282-4475346)
chr3 (47-135)||(32618949-32619037)
chr3 (89-135)||(30430672-30430718)
chr3 (57-111)||(45404826-45404880)
chr3 (57-106)||(10821864-10821913)
chr3 (74-135)||(25799512-25799572)
chr3 (94-135)||(28725283-28725324)
chr3 (47-84)||(34396901-34396938)
chr3 (53-117)||(44094174-44094239)
[»] chr2 (37 HSPs)
chr2 (53-135)||(27847862-27847944)
chr2 (47-135)||(981080-981167)
chr2 (47-135)||(32945617-32945705)
chr2 (57-151)||(18509487-18509580)
chr2 (47-135)||(16127923-16128011)
chr2 (57-135)||(7328471-7328548)
chr2 (57-135)||(12874853-12874931)
chr2 (64-129)||(35926736-35926800)
chr2 (64-135)||(25330565-25330636)
chr2 (58-135)||(20972396-20972473)
chr2 (60-135)||(16192588-16192664)
chr2 (57-135)||(4921336-4921414)
chr2 (57-135)||(37897580-37897658)
chr2 (63-115)||(35926903-35926955)
chr2 (57-135)||(16126225-16126303)
chr2 (57-135)||(39159268-39159344)
chr2 (59-135)||(37897727-37897803)
chr2 (60-135)||(12874685-12874760)
chr2 (60-135)||(39786493-39786567)
chr2 (59-105)||(8185256-8185302)
chr2 (61-135)||(16126397-16126470)
chr2 (57-135)||(16333322-16333400)
chr2 (61-135)||(32483651-32483725)
chr2 (57-135)||(43130316-43130393)
chr2 (58-135)||(980924-981000)
chr2 (57-130)||(4921179-4921252)
chr2 (74-115)||(26859208-26859248)
chr2 (64-117)||(32945792-32945845)
chr2 (70-118)||(18560518-18560566)
chr2 (60-116)||(26403030-26403086)
chr2 (70-130)||(30714132-30714192)
chr2 (60-135)||(39786321-39786396)
chr2 (61-135)||(16333155-16333228)
chr2 (62-128)||(24225551-24225617)
chr2 (57-115)||(27848005-27848063)
chr2 (87-135)||(17368873-17368921)
chr2 (75-115)||(39751274-39751314)
[»] scaffold0025 (2 HSPs)
scaffold0025 (57-135)||(63998-64076)
scaffold0025 (47-116)||(63851-63918)
[»] scaffold0042 (2 HSPs)
scaffold0042 (59-129)||(30732-30802)
scaffold0042 (59-135)||(30316-30392)
[»] scaffold0009 (1 HSPs)
scaffold0009 (61-135)||(27006-27080)
[»] scaffold0328 (2 HSPs)
scaffold0328 (57-115)||(11625-11683)
scaffold0328 (64-116)||(11033-11085)
[»] scaffold0129 (1 HSPs)
scaffold0129 (57-115)||(6296-6354)


Alignment Details
Target: chr1 (Bit Score: 95; Significance: 1e-46; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 47 - 157
Target Start/End: Complemental strand, 13765649 - 13765539
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattttaacccgatat 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  13765649 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggagattatttacttattttaaccctatat 13765550  T
Q  147 attattcgaca 157  Q
    |||||| ||||    
T  13765549 attattagaca 13765539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 16706498 - 16706589
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgt---tggtatatttagggggactatttacttattt 135  Q
    ||||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  16706498 aaaattttagagggaccaaaaacctaaagaatattttagggggactaaaatcaaatgttggtggtatatttagggggactatttacatattt 16706589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 30749044 - 30748956
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| || |||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||||||| |||| ||||||||||||    
T  30749044 aaaattttgaagggaccaaaagcctaaagaatattttagggggactaaaatcaaatatttgtatatttaggaggaccatttacttattt 30748956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 30770495 - 30770407
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| || |||||||||||| |||||||||||||||| ||||||||||||||||| || ||||||||||| |||| ||||||||||||    
T  30770495 aaaattttgaagggaccaaaagcctaaagaatattttagggggactaaaatcaaatatttgtatatttaggaggaccatttacttattt 30770407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 15393326 - 15393405
Alignment:
Q  55 aaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| ||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||| ||||||| ||||||||||||    
T  15393326 aaagagaccaaaaacctaaa-aatattttagggggactgaaatcaaatgttggtatatttcgggggaccatttacttattt 15393405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 32800287 - 32800375
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| |||||||||||||||| | ||||||||||| ||| ||||||||||| ||| ||||||||| ||||||||||||||||||    
T  32800287 aaaattttagagggaccaaaaacctacataatattttatgaggattaaaatcaaatattgatatatttagtgggactatttacttattt 32800375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 148
Target Start/End: Original strand, 14760047 - 14760136
Alignment:
Q  58 gggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattttaacccgatatat 148  Q
    |||||||||| |||||| ||||||||| ||||| |||||||||||||||||||||||| |||||  ||||||||| |||||||| ||||||    
T  14760047 gggaccaaaagcctaaaaaatattttagggggattaaaatcaaatgttggtatatttaaggggatcatttactta-tttaaccctatatat 14760136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 22679499 - 22679577
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||  |||||||||  |||||||||||||||||||||||||||||||||||   |||||||||||    
T  22679499 agggaccaaaaacctaacaaatattttagagggactaaaatcaaatgttggtatatttagggggatcgtttacttattt 22679577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 22679420 - 22679342
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| |||||||||||| |||||||| ||||| |||||||| |||||| |||||| || ||||||||||||||||||    
T  22679420 agggacaaaaaacctaaaggatattttagggggattaaaatcatatgttgatatattcagagggactatttacttattt 22679342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 30746856 - 30746778
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| ||||||||||||||||||||| ||  ||||||||||||| || ||||||||| |||||| ||||||||||||    
T  30746856 agggacaaaaaacctaaagaatattttaaggaaactaaaatcaaatattagtatatttaaggggaccatttacttattt 30746778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 30768307 - 30768229
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| ||||||||||||||||||||| ||  ||||||||||||| || ||||||||| |||||| ||||||||||||    
T  30768307 agggacaaaaaacctaaagaatattttaaggaaactaaaatcaaatattagtatatttaaggggaccatttacttattt 30768229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 16706416 - 16706348
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactattt 127  Q
    ||||||||| ||||||||| ||||||  |||||||||||||||||||||||||||||| |||| |||||    
T  16706416 ggaccaaaagcctaaagaaaattttagagggactaaaatcaaatgttggtatatttagagggaatattt 16706348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 15393227 - 15393150
Alignment:
Q  58 gggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||| ||||| |||||||||| |||||| ||||| |||| |||||||||||  | |||||||||||||||||    
T  15393227 gggaccaaaagcctaaggaatattttagggggacgaaaattaaatattggtatatttgtgaggactatttacttattt 15393150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 30749103 - 30749191
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||| ||||||||| |||| |||||||||  || | ||||||||||||||| |||||||||| ||| ||||||| |||||    
T  30749103 aaaattttagaggaaccaaaaacataaaaaatattttagaggaattaaaatcaaatgttgatatatttaggaggattatttacgtattt 30749191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 30770554 - 30770642
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||| ||||||||| |||| |||||||||  || | ||||||||||||||| |||||||||| ||| ||||||| |||||    
T  30770554 aaaattttagaggaaccaaaaacataaaaaatattttagaggaattaaaatcaaatgttgatatatttaggaggattatttacgtattt 30770642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 39785267 - 39785225
Alignment:
Q  93 aaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| |||||||||||| ||||||||||||||||||||||||    
T  39785267 aaaattaaatgttggtatttttagggggactatttacttattt 39785225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Original strand, 8819369 - 8819414
Alignment:
Q  62 ccaaaaacctaaagaatattttatggggactaaaatcaaatgttgg 107  Q
    |||||||||||| |||||||||||||  ||||||||||||||||||    
T  8819369 ccaaaaacctaaggaatattttatggatactaaaatcaaatgttgg 8819414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 134
Target Start/End: Complemental strand, 20171471 - 20171395
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttatt 134  Q
    |||||||||||  ||||  |||||||||  ||||||||||||||||||||||||| ||| || ||| |||||||||||    
T  20171471 agggaccaaaagtctaagaaatattttagagggactaaaatcaaatgttggtata-ttaaggagaccatttacttatt 20171395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 51900179 - 51900119
Alignment:
Q  75 gaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||| ||  |||||||||||||||||| ||||||||  |||| ||||||||||||    
T  51900179 gaatattttaaggaaactaaaatcaaatgttggaatatttagaaggaccatttacttattt 51900119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 23485763 - 23485676
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttatt 134  Q
    ||||| ||| ||||||||||||  |||| |  ||||||   ||||||||||||||| ||  ||||||||||| |||||||||||||||    
T  23485763 aaaattttagagggaccaaaaatttaaaaagcattttaaatggactaaaatcaaatattaatatatttagggagactatttacttatt 23485676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 23485856 - 23485923
Alignment:
Q  68 acctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||  || | ||||||||||| ||||||| |||||| |||  ||||||||||||    
T  23485856 acctaaagaatattttagaggaattaaaatcaaattttggtatgtttaggaggatcatttacttattt 23485923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 35215096 - 35215038
Alignment:
Q  76 aatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||| | ||| ||||||| ||||||||||||| ||||||| ||||||||||    
T  35215096 aatattttatggg-attaagatcaaatattggtatatttagagggactaattacttattt 35215038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 23528233 - 23528299
Alignment:
Q  69 cctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||| |   |||||||||| |||||||| |||||||||   ||||||||||||||||    
T  23528233 cctaaagaatatttcagaaggactaaaattaaatgttgatatatttagaaagactatttacttattt 23528299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 116
Target Start/End: Complemental strand, 14760005 - 14759976
Alignment:
Q  87 gggactaaaatcaaatgttggtatatttag 116  Q
    ||||||||||||||||||||||||||||||    
T  14760005 gggactaaaatcaaatgttggtatatttag 14759976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 30746940 - 30746993
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 116  Q
    |||||| |||| |||||||||   ||||||||||| ||||||||||||||||||    
T  30746940 caaaaatctaaggaatattttgaagggactaaaatgaaatgttggtatatttag 30746993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 30768391 - 30768444
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 116  Q
    |||||| |||| |||||||||   ||||||||||| ||||||||||||||||||    
T  30768391 caaaaatctaaggaatattttgaagggactaaaatgaaatgttggtatatttag 30768444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 69; Significance: 4e-31; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 31212463 - 31212535
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  31212463 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggagactatttacttattt 31212535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 31212396 - 31212318
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  31212396 agggaccaaaagcctaaagaatattttatggggactaaaatcaaatgttgatatatttaaggggactatttacttattt 31212318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 9861661 - 9861573
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||    
T  9861661 aaaattttagagggaccaaaagcctaaagaatattttatagggactaaaatcaaatgttgatatatttaggaggactatttacttattt 9861573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 6906344 - 6906269
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6906344 ggaccaaaagcctaaggaatattttatggggactaaa-tcaaatgttggtatatttagggggactatttacttattt 6906269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 6906446 - 6906524
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  6906446 agggatcaaaagcctaaaaaatattttatggggactaaaatcaaatgttggtatatttagggggaccgtttacttattt 6906524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 33892117 - 33892041
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||| | | |||||||||||||||    
T  33892117 ggaccaaaaacctaaagaatattttgaggggactaaaatcaaatgttggtatatttaagagaactatttacttattt 33892041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 10070022 - 10070110
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| |||||||||||||||||| ||||||||| | ||| |||||| |||| |||||||||||||||| ||||||| |||||||    
T  10070022 aaaattttagagggaccaaaaacctaaaaaatattttaggaggattaaaataaaatattggtatatttaggggaactatttgcttattt 10070110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 15229709 - 15229621
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||| |||||  | |||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  15229709 aaaattttagagggatcaaaagtcaaaagaatattttatagggactaaaataaaatgttggtatatttaagggaactatttacttattt 15229621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 33892199 - 33892287
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||| |  || | |||||||||||    
T  33892199 aaaattttagagggaccaaaaacataaagaatattttaaagggactaaaatcaaatgttggtatatttaagaagattgtttacttattt 33892287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 134
Target Start/End: Complemental strand, 14148472 - 14148402
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttatt 134  Q
    ||||||||||  ||||||||| | ||||||||||||||||||| ||||||||||||||| | |||||||||    
T  14148472 aaaaacctaagaaatattttaggaggactaaaatcaaatgttgatatatttagggggaccacttacttatt 14148402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 115
Target Start/End: Original strand, 14148860 - 14148916
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||||||| |||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  14148860 ggaccaaaagcctaaaaaatatgttagggggactaaaatcaaatgttggtatattta 14148916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 8791887 - 8791958
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||  ||||||||||| ||| |||||||||||||| ||||||||| | | |||||||||||||||    
T  8791887 aaaaacctaagaaatattttatgaggattaaaatcaaatgttagtatatttaagagaactatttacttattt 8791958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 118
Target Start/End: Complemental strand, 8791803 - 8791732
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttaggg 118  Q
    ||||| ||| |||||||||||||||||  ||||||||  || || ||||||||||||||| |||||||||||    
T  8791803 aaaattttagagggaccaaaaacctaacaaatattttggggtgagtaaaatcaaatgttgatatatttaggg 8791732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 135
Target Start/End: Complemental strand, 5879926 - 5879880
Alignment:
Q  89 gactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||| || |||||||||||| ||||||||||||||||    
T  5879926 gactaaaatcaaatattagtatatttagggagactatttacttattt 5879880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 10069932 - 10069858
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttat 133  Q
    ||||||||| ||||||||||||||||  |||  |||||| ||||||||||| |||||| ||||  ||||||||||    
T  10069932 ggaccaaaatcctaaagaatattttagaggggttaaaattaaatgttggtacatttagtgggaacatttacttat 10069858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 27503663 - 27503721
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||||||||| |||||| ||||||||||||  ||||||||||||| ||| ||||||||    
T  27503663 agggaccaaaagcctaaataatattttatggaaactaaaatcaaatattgatatattta 27503721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 29242510 - 29242437
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| ||||| ||||||||||  ||||||||||| |||||||||||| ||||| ||||| | ||||||||||    
T  29242510 accaaaagcctaatgaatattttagagggactaaaataaaatgttggtat-tttagagggacaagttacttattt 29242437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 120
Target Start/End: Original strand, 7766359 - 7766420
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttaggggg 120  Q
    |||| ||||| |||| ||||||| || |||||||||||| ||||||| ||||||||||||||    
T  7766359 ggacaaaaaatctaaggaatattatagggggactaaaataaaatgttagtatatttaggggg 7766420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 20691343 - 20691279
Alignment:
Q  70 ctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| |||||||||| ||||| ||||||||||| |||||||||||| |||| | ||||||||||||    
T  20691343 ctaaggaatattttagggggaataaaatcaaattttggtatatttaagggg-ccatttacttattt 20691279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 114
Target Start/End: Complemental strand, 36874393 - 36874336
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattt 114  Q
    ||||||||||||||||| ||||||||||  || |||||||| ||||||||| ||||||    
T  36874393 agggaccaaaaacctaaggaatattttagaggaactaaaattaaatgttggcatattt 36874336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 116
Target Start/End: Original strand, 37037275 - 37037335
Alignment:
Q  56 aagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 116  Q
    ||||||||||||   ||| ||||||||||  ||||||||||||||||||||| ||||||||    
T  37037275 aagggaccaaaagtataaggaatattttagagggactaaaatcaaatgttggaatatttag 37037335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 5880043 - 5880114
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| |||| ||||||||||   |||| |||||||||||||||| |||||||| | || ||||||||||||    
T  5880043 aaaaatctaaggaatattttaaaaggacaaaaatcaaatgttggtttatttaggagaacaatttacttattt 5880114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 29242845 - 29242922
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| |||||||||  ||| |||||  |||||||||||||||||||| || ||||  |||||| ||||||||||||    
T  29242845 agggaccgaaaacctaagaaattttttagagggactaaaatcaaatgttgata-attttaggggacaatttacttattt 29242922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 39484729 - 39484806
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| |||||  ||||||||| || || |||||  |||||||| |||||||||||| || ||||||||||||    
T  39484729 agggaccaaaatcctaagaaatattttagggagattaaaaa-aaatgttgatatatttaggggaaccatttacttattt 39484806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 19105417 - 19105505
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19105417 aaaattttagagggaccaaaagcctaaagaatagtttaaggggactaaaatcaaaagttggtatatttagggggactatttacttattt 19105505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 7760770 - 7760848
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| |||||  |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7760770 agggaccaaaagcctaagaaatattttatagggactaaaatcaaatgttggtatatttaggggaactatttacttattt 7760848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 9686460 - 9686536
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  9686460 ggaccaaaagcctaaataatattttatggggactaaaatcaaatattgatatatttaggaggactatttacttattt 9686536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 135
Target Start/End: Complemental strand, 6036626 - 6036553
Alignment:
Q  62 ccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  6036626 ccaaaaacctaaaaactattttaaggggactaaaatcaaatgttgatatatttaggggaactatttacttattt 6036553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 29635327 - 29635240
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| |||||||||||  |||| |||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  29635327 aaaattttagagggaccaaaagtctaaggaatatttta-ggggactaaaatcaaatgttgatatatttagggggaccatttacttattt 29635240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 135
Target Start/End: Complemental strand, 3555440 - 3555370
Alignment:
Q  65 aaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  3555440 aaaacctaagaaatattttagggggactaaaatcaaatgttggtatatttagggggaccatttgcttattt 3555370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 7760691 - 7760613
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| |||||||||||||||| |||||||||||||| ||| ||||||||||||  ||| |||||||||||||    
T  7760691 agggaccaaaagcctaaagaatattttagggggactaaaatcatatgctggtatatttagaaggattatttacttattt 7760613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 12821272 - 12821184
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||| ||||||| |||||| ||||||||| ||||| |||||||||| ||||||||||||| |||||| ||||||||||||    
T  12821272 aaaattttagaggaaccaaaagcctaaaaaatattttagggggattaaaatcaaacgttggtatatttaaggggaccatttacttattt 12821184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 37081257 - 37081344
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||||||||| |||||||||  |||||||||||||||| |||| |||||||| ||||| |||||||||||||    
T  37081257 aaaattttagagggaccaaaaacctaaggaatatttttgggggactaaaatcaaacgttgatatattta-ggggaatatttacttattt 37081344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 20165014 - 20165092
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||||||||||| ||||||||||  |||||||||||||||||||||||||||||||  ||| |||| |||||||    
T  20165014 agggatcaaaaacctaatgaatattttagagggactaaaatcaaatgttggtatatttaggaagaccatttccttattt 20165092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 137
Target Start/End: Complemental strand, 18881190 - 18881115
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggt--atatttagggggactatttacttatttta 137  Q
    |||||||||||||||||||||  || |||||||||||||||||||  ||||||| |||||||||| ||||||||||    
T  18881190 aaaaacctaaagaatattttaaaggaactaaaatcaaatgttggtatatatttatggggactattcacttatttta 18881115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 21657462 - 21657550
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||| ||||| | ||| |||||||||| |||| |||| |||||||||| |||||||||||| ||||||||||||||||    
T  21657462 aaaattttagagggatcaaaagcgtaaggaatattttaagggggctaatatcaaatgttagtatatttagggagactatttacttattt 21657550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 31198391 - 31198304
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||| ||| |||||||| |||||||||   |||||||||||||||||||||||||||| ||| |||||||||||||||    
T  31198391 aaaattttagagggatcaataacctaaaaaatattttagaaggactaaaatcaaatgttggtatattta-gggaactatttacttattt 31198304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 23797217 - 23797295
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||| ||||  |||||||||  |||||||||||||||||||| |||||||||||  ||||||||| |||||    
T  23797217 agggaccaaaaatctaagaaatattttagagggactaaaatcaaatgttgatatatttagggaaactatttacatattt 23797295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 31172348 - 31172426
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||| ||||||||| | ||| |||||||||||||| |||||||||  ||||  ||||||||||||    
T  31172348 agggaccaaaaacctaaaaaatattttaggaggattaaaatcaaatgtttgtatatttaaagggatcatttacttattt 31172426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 15329939 - 15329870
Alignment:
Q  59 ggaccaaaaacctaaag-aatattttatggggactaaaatcaaatgttggtatatttagggggactattt 127  Q
    ||||||||||||| ||| ||||| ||  |||||||||||||||||||||||||||||| |||||||||||    
T  15329939 ggaccaaaaaccttaagtaatatctttgggggactaaaatcaaatgttggtatatttaaggggactattt 15329870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 31198475 - 31198548
Alignment:
Q  62 ccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| |||||  ||||||||| | | ||||||||||||||||||||||||||  ||||||||||||||||||    
T  31198475 ccaaaagcctaagaaatattttaggagaactaaaatcaaatgttggtatatttaaagggactatttacttattt 31198548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 20164702 - 20164624
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||| ||| ||| ||||||    ||||||||||||||||||||||||||  |||||| ||||||||||||    
T  20164702 agggaccaaaaacttaaggaaaattttaaaatgactaaaatcaaatgttggtatattttaggggaccatttacttattt 20164624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 9686373 - 9686297
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaa-tcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||| | |||| |||||||| |||||||||||| |||||| || |||||||||||| || |||||||||||||    
T  9686373 gaccaaaagcttaaaaaatattttttggggactaaaaatcaaatattagtatatttagggagattatttacttattt 9686297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 19105338 - 19105281
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||||||||| |||||||||||||||| | ||||||||||| |||||| |||||||||    
T  19105338 agggaccaaaagcctaaagaatatttta-gaggactaaaatcgaatgttagtatattta 19105281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 21657376 - 21657302
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||  ||||||||||||||| |||  ||||| | |||||||| |||||||||| |||| ||||||||||||    
T  21657376 accaaaagtctaaagaatattttaagggagctaaagttaaatgttgatatatttaggaggaccatttacttattt 21657302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 47741036 - 47741105
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttactta 132  Q
    ||||| |||||  ||||||||  ||||||| |||| ||||||||||||||||| |||||| |||||||||    
T  47741036 caaaagcctaagaaatatttttgggggactgaaattaaatgttggtatatttatggggaccatttactta 47741105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 135
Target Start/End: Original strand, 8130092 - 8130149
Alignment:
Q  76 aatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||||| |  |||||| |||||||||||  ||||||||||||||||    
T  8130092 aatattttatggggactaaact--aatgtttgtatatttaggaagactatttacttattt 8130149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 117
Target Start/End: Original strand, 29635676 - 29635736
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagg 117  Q
    ||||||||||| | |||| ||||||||| | | ||||||||||||||||| ||||||||||    
T  29635676 agggaccaaaatcttaaaaaatattttaggagaactaaaatcaaatgttgatatatttagg 29635736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 119
Target Start/End: Original strand, 35304242 - 35304285
Alignment:
Q  76 aatattttatggggactaaaatcaaatgttggtatatttagggg 119  Q
    ||||||||| | ||||||||||||| ||||||||||||||||||    
T  35304242 aatattttaggcggactaaaatcaattgttggtatatttagggg 35304285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 35054524 - 35054450
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||  |||||||||||||||  ||||  ||||| ||||||| ||||||||||  | |||||||||||||||    
T  35054524 accaaaagtctaaagaatattttaaagggatcaaaattaaatgttagtatatttagaagaactatttacttattt 35054450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 35303937 - 35303859
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||||| || ||||||| | ||| |||||||| |||| ||| ||||||| ||||||| || || ||||||    
T  35303937 agggaccaaaaacctcaaaaatatttaaggggaactaaaattaaatattgatatatttcgggggaccatgtaattattt 35303859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 102
Target Start/End: Complemental strand, 23797141 - 23797100
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaat 102  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  23797141 accaaaaacctaaataatgttttaaggggactaaaatcaaat 23797100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 22297854 - 22297767
Alignment:
Q  48 aaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| |||||||||||||||||||||| |||||||||  |||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  22297854 aaattttaaagggaccaaaaacctaaaaaatattttagagggactaaaatcaaatgttgatatatttagagggactatttacttattt 22297767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 22297925 - 22298013
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  22297925 aaaattttagagggaccaaaaacttaaaaaatattttaaggggactaaaatcaaatgttagtatatttagggggaccatttacttattt 22298013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 25906130 - 25906208
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| |||||||||||||| | ||||||||||||||||||||| |||||||||| ||| |||||||||||||    
T  25906130 agggaccaaaagcctaaagaatatttaagggggactaaaatcaaatgttgatatatttaggaggattatttacttattt 25906208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 29673373 - 29673296
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||||| |||||| ||||||||| | |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  29673373 agggaacaaaatcctaaa-aatattttaggaggactaaaatcaaatgttggtatatttaaggggaccatttacttattt 29673296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 2344627 - 2344715
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| |||||||||||||||  |||| |||||| |||  || |||||||| |||||||||| |||||||| |||||||||||||||||    
T  2344627 aaaattttaaagggaccaaaagactaaggaatatgttagaggaactaaaataaaatgttggtctatttaggaggactatttacttattt 2344715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 20510420 - 20510358
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggg 119  Q
    |||||| ||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||    
T  20510420 agggactaaaaacctaaagaatatttttaggggactaaaatcaaatgttaatatatttagggg 20510358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 6843175 - 6843087
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| |||||||||||| |||| ||||||| || | |||||||||||||||||| |||||||||  | ||||||||| ||||||    
T  6843175 aaaattttagagggaccaaaaatctaaggaatattctaggaggactaaaatcaaatgtttgtatatttaaagagactatttatttattt 6843087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 17047948 - 17047860
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| |||||||||||   |||||||||||||| | || |||||||||||| ||||||||||||| | |||||||||| |||||    
T  17047948 aaaattttagagggaccaaaagtttaaagaatattttaggagggctaaaatcaaatattggtatatttagagagactatttacatattt 17047860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 141
Target Start/End: Original strand, 20510468 - 20510551
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattttaaccc 141  Q
    ||||| ||||| |||||| |||||||||  |||||||||||||||||||  |||||||| | ||||||||||||| |||||||||    
T  20510468 agggatcaaaagcctaaaaaatattttaatgggactaaaatcaaatgtttatatatttatgaggactatttactt-ttttaaccc 20510551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 25906051 - 25905963
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||| ||||   |||| |||| ||||||||||||||||||||||||||| || |||||  ||||||||||||    
T  25906051 aaaattttagagggaccaaaagcctatgaaatactttagggggactaaaatcaaatgttggtatatataaggggatcatttacttattt 25905963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 2846625 - 2846578
Alignment:
Q  88 ggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  2846625 ggactaaaatcaaatgttgatatatttagggggaccatttacttattt 2846578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 135
Target Start/End: Complemental strand, 2858462 - 2858415
Alignment:
Q  88 ggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  2858462 ggactaaaatcaaatgttgatatatttagggggaccatttacttattt 2858415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 57 - 140
Target Start/End: Original strand, 29673711 - 29673794
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattttaacc 140  Q
    ||||||||||| | |||  |||||||||  || |||||||||||||||| ||||||||||||| || |||||||||||| ||||    
T  29673711 agggaccaaaaccttaagaaatattttagaggaactaaaatcaaatgtttgtatatttaggggaaccatttacttatttaaacc 29673794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 13657629 - 13657554
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||  |||||||||||||||  || |||||||||||||||| |||||||||  ||||| ||||| ||||||    
T  13657629 gaccaaaagtctaaagaatattttagaggaactaaaatcaaatgtttgtatatttaaagggaccatttatttattt 13657554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 38299116 - 38299195
Alignment:
Q  56 aagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||| ||||||||| ||||||  || ||||||||| ||| |||||||||||| ||  | |||||||||||||    
T  38299116 aagggaccaaaagcctaaagaaaattttagaggaactaaaatcgaatattggtatatttaaggaaaatatttacttattt 38299195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 12272579 - 12272525
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagg 117  Q
    |||||||||||| | |||||||  | |||||||||||||||||||||||||||||    
T  12272579 caaaaacctaaaaattattttagagagactaaaatcaaatgttggtatatttagg 12272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 17048032 - 17048105
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| |||||| ||| ||||| |||||||||| ||||||||||||||||||| |||||  ||| ||||||||    
T  17048032 accaaaagcctaaaaaatcttttagggggactaaa-tcaaatgttggtatatttaaggggatcattcacttattt 17048105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 2344559 - 2344511
Alignment:
Q  87 gggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||||||| || |||||| ||||||||| |||||||||||    
T  2344559 gggactaaaatcaaatgatgatatattaagggggactgtttacttattt 2344511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 38298770 - 38298718
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 116  Q
    |||||||||||||||||||||  |||||| ||||||||| ||| |||||||||    
T  38298770 aaaaacctaaagaatattttagagggacttaaatcaaatattgatatatttag 38298718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 112
Target Start/End: Original strand, 8086710 - 8086765
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatat 112  Q
    |||||||||||| ||||| ||||||||| ||||| ||||||||||| || ||||||    
T  8086710 agggaccaaaaatctaaaaaatattttagggggattaaaatcaaatatttgtatat 8086765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 11929331 - 11929301
Alignment:
Q  97 tcaaatgttggtatatttagggggactattt 127  Q
    |||||||||||||||||||||||||||||||    
T  11929331 tcaaatgttggtatatttagggggactattt 11929301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 13657722 - 13657800
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||||| || ||| ||||||||| |   |||||||||||||||| ||||||||  | |||||||||||||||||    
T  13657722 agggaacaaaagccaaaataatattttaggaaaactaaaatcaaatgttagtatatttcagaggactatttacttattt 13657800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 24490776 - 24490699
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||| |||   ||||||||  | ||||||||||||||||||||||| ||||  |||| ||||||||||||    
T  24490776 agggaccaaaaacttaagagatattttagagagactaaaatcaaatgttggtata-ttagaaggaccatttacttattt 24490699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 38900301 - 38900228
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| | |||| ||||||||| || ||||||||| |||| ||||||||||||| ||||  ||||||||||||    
T  38900301 accaaaagcataaaaaatatttta-ggagactaaaataaaatattggtatatttagagggaaaatttacttattt 38900228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 5161081 - 5161132
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    |||||||||||| ||||||||| ||||| ||||||||||||||  ||||||||    
T  5161081 caaaaacctaaataatatttta-ggggagtaaaatcaaatgttaatatattta 5161132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 13340526 - 13340448
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13340526 agggaccaaaagcctaaagaatgttttatagggactaaaatcaaatgttggtatatttaaggggactatttacttattt 13340448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 57 - 127
Target Start/End: Original strand, 13340616 - 13340686
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactattt 127  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  13340616 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttagtatatttaaggggactattt 13340686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 34637587 - 34637675
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||||| ||||||||||||||||    
T  34637587 aaaattttagagggaccaaaaacctcaagaatattttaggggaactaaaatcaaatgttgatatatttagggtgactatttacttattt 34637675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 34637511 - 34637430
Alignment:
Q  53 ttaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||  || |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||    
T  34637511 ttaaagggaccaaaagtctcaagaatatttta-ggggactaaaatcaaatgttggtatatttatggagactatttacttattt 34637430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 12290064 - 12289985
Alignment:
Q  56 aagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| ||||||||||  |||||||||| |  | |||||||||||||||||||||||||||| ||||||||||||||||    
T  12290064 aagggatcaaaaacctagggaatattttaggcaggctaaaatcaaatgttggtatatttagggagactatttacttattt 12289985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 31298897 - 31298975
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||||| ||||||||||||||||  || ||||||||||||| ||||||||||||  ||||||||||||||||||    
T  31298897 agggagcaaaagcctaaagaatattttagaggaactaaaatcaaatattggtatatttaaagggactatttacttattt 31298975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 7359593 - 7359670
Alignment:
Q  58 gggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| ||||| |||||| ||||||||| ||||| ||||||||||||||||||||||||||| ||| | ||||||||||    
T  7359593 gggatcaaaagcctaaataatattttagggggagtaaaatcaaatgttggtatatttagggcgacgagttacttattt 7359670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 24704400 - 24704313
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttatt 134  Q
    ||||| ||| ||||||||||| | |||| ||||||||| || |||||||||||||| ||||||||||||| || || |||||||||||    
T  24704400 aaaattttagagggaccaaaagcataaataatattttagggagactaaaatcaaatattggtatatttagaggaaccatttacttatt 24704313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 30519773 - 30519704
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 116  Q
    ||||| ||| ||||||||||||| |||| |||||||||  | || |||||||||||||||||||||||||    
T  30519773 aaaattttagagggaccaaaaacttaaataatattttaaagagattaaaatcaaatgttggtatatttag 30519704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 403383 - 403312
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||||||| | ||| |||||| |||| || || ||||||| ||||||||||||||||||    
T  403383 caaaaacctaaagaatatttta-gaggattaaaattaaatattagtttatttagagggactatttacttattt 403312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 24704755 - 24704831
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| |||||  |||||||||||||| ||| ||||||||||||| ||| ||||||||||||  | ||||||||||||    
T  24704755 agggactaaaaatttaaagaatattttaggggaactaaaatcaaatattgatatatttagggg--ccatttacttattt 24704831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 6190648 - 6190577
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttactta 132  Q
    ||||||||||||||  ||||||| | || |||||||||||||||||| ||||||||||| ||  |||||||||    
T  6190648 gaccaaaaacctaagaaatatttaa-ggagactaaaatcaaatgttgatatatttagggagatcatttactta 6190577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 141
Target Start/End: Original strand, 10284377 - 10284459
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattttaaccc 141  Q
    ||||||| |||||| ||||||||||| || || ||||||||||||||  | |||||| |||||  ||||||||  ||||||||    
T  10284377 ggaccaacaacctatagaatattttaaggagattaaaatcaaatgttactgtatttaaggggatcatttactttatttaaccc 10284459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 135
Target Start/End: Complemental strand, 10284297 - 10284221
Alignment:
Q  56 aagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| ||||| ||| ||| ||||||||||||  |||||||||   |||||||||||||||| |||| ||||| |||||||    
T  10284297 aaggaaccaataacttaacgaatattttatgaagactaaaat---atgttggtatatttagagggattattttcttattt 10284221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 149
Target Start/End: Original strand, 54164629 - 54164730
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattttaacccgatat 146  Q
    ||||| ||| ||||||| |||||||||| |||||||||| | |||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||    
T  54164629 aaaattttagagggaccgaaaacctaaaaaatattttatagagactaaaatcaaatgttggtatatttagggagactatttactta-tttaaccctatat 54164727  T
Q  147 att 149  Q
    |||    
T  54164728 att 54164730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 13552837 - 13552913
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| |||||| ||||||||||||||||||||||||||| ||| |||||||||| |||||||||||||||||    
T  13552837 ggaccaaaagcctaaataatattttatggggactaaaatcaaatattgatatatttaggaggactatttacttattt 13552913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 54164547 - 54164471
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| ||||||  |||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||    
T  54164547 ggaccaaaagcctaaaatatattttatgaggactaaaatcaaatgttggtatatttagaacgactatttacttattt 54164471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 57 - 132
Target Start/End: Original strand, 17431133 - 17431208
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttactta 132  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||  |||| |||||||||    
T  17431133 agggaccaaaagcctaaaaaatattttagggggactaaaatcaaatgttgatatatttagatggaccatttactta 17431208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 117
Target Start/End: Complemental strand, 34665057 - 34665003
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagg 117  Q
    |||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  34665057 caaaaacctaaagaatattttaaggggactaaaatcaaatgttagtatatttagg 34665003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 17430790 - 17430725
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactattta 128  Q
    ||||| ||||| ||||||||||  |||||||||||||||||||||||||||||| ||||| |||||    
T  17430790 caaaagcctaaggaatattttagagggactaaaatcaaatgttggtatatttagagggacaattta 17430725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 32185334 - 32185286
Alignment:
Q  87 gggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  32185334 gggactaaaatcaaatgttggtatatttagagggactatttactcattt 32185286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 33752710 - 33752784
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| |||||||||||||||| || |||||||||||||||||| ||||||||   ||||  |||||||||||    
T  33752710 accaaaagcctaaagaatattttagggagactaaaatcaaatgttgatatatttaaaaggaccgtttacttattt 33752784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 13552750 - 13552674
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaa-tcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||| | |||| |||||||| |||||||||||| |||||| || |||||||||||| || |||||||||||||    
T  13552750 gaccaaaagcttaaaaaatattttttggggactaaaaatcaaatattagtatatttagggagattatttacttattt 13552674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 32186630 - 32186698
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||| ||| || |||||||| ||||||||||||||||  || |||||||| |||||||||||||||||    
T  32186630 aaaattttagagagaccaaaagcctaaagaatattttagaggaactaaaattaaatgttggtatattta 32186698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 34665157 - 34665209
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||| |||||| ||||||||| || |||||||||||||||||||||||||||    
T  34665157 caaaagcctaaaaaatattttagggtgactaaaatcaaatgttggtatattta 34665209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 53343786 - 53343710
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| |||||||||  |||||||||  | ||||||||||||| ||||||||||||| | |||| ||||||||||||    
T  53343786 ggacccaaaacctaagaaatattttaacgagactaaaatcaaacgttggtatatttaagaggaccatttacttattt 53343710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 7513606 - 7513532
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| |||||| ||||||||| ||  | |||||| |||||||||||||||||| ||  ||||||||||||||    
T  7513606 accaaaagcctaaaaaatattttaaggtaattaaaattaaatgttggtatatttagaggagctatttacttattt 7513532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 113
Target Start/End: Original strand, 17615992 - 17616058
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatt 113  Q
    |||||||||||| || |||||||||||| |||| |||| ||| |||||||| |||||||| ||||||    
T  17615992 aaaatattaaagagatcaaaaacctaaaaaataatttaggggaactaaaattaaatgttgatatatt 17616058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 28687624 - 28687692
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||| ||| ||||||||||| |||||| |||||||||  |  ||||||||||||||||| ||||||||    
T  28687624 aaaattttagagggaccaaaaccctaaaaaatattttagagtaactaaaatcaaatgttgatatattta 28687692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 115
Target Start/End: Complemental strand, 33752370 - 33752327
Alignment:
Q  72 aaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||||    
T  33752370 aaagaatattttagggggactaaaatcaaatattgatatattta 33752327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 135
Target Start/End: Original strand, 16854796 - 16854878
Alignment:
Q  53 ttaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| | |||||| |||| ||||||||||   ||||||||||  ||||||| | ||||||||  ||||||||||||||||    
T  16854796 ttaaaggaatcaaaaaactaaggaatattttagacggactaaaatttaatgttgatctatttaggacgactatttacttattt 16854878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 17168814 - 17168864
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatt 113  Q
    |||||| ||||| |||||||||  ||||||||||||||||||| |||||||    
T  17168814 caaaaatctaaaaaatattttaaagggactaaaatcaaatgtttgtatatt 17168864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 17174386 - 17174436
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatt 113  Q
    |||||| ||||| |||||||||  ||||||||||||||||||| |||||||    
T  17174386 caaaaatctaaaaaatattttaaagggactaaaatcaaatgtttgtatatt 17174436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 17250541 - 17250467
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||| ||||  ||||||||| ||| | |||||||||||||| |||||||| |  |||| ||||||||||||    
T  17250541 accaaaaatctaagaaatattttaagggaaataaaatcaaatgtttgtatatttggaaggaccatttacttattt 17250467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 31079008 - 31078953
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||||||| ||||| |||||||||| |||||||||||| |||  ||||||||||||    
T  31079008 ggaccaaaagcctaatgaatattttagggggactaaaattaaa-attggtatattta 31078953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 30172150 - 30172076
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  30172150 accaaaaacctaaagaatattttaaggggactaaaatcaaatgttgatatatttagggggaccatttacttattt 30172076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 30430363 - 30430275
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||| ||||||||||||||||  || ||||||||||||||||||||||||||| ||||| ||||||||||||    
T  30430363 aaaattttagagggaccaaaagcctaaagaatattttagaggaactaaaatcaaatgttggtatatttagagggaccatttacttattt 30430275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 30173613 - 30173703
Alignment:
Q  45 ataaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| ||| ||||| ||||| ||||||||| |||||| ||||||||||||||||| |||||||||||||||  ||||||| |||||||    
T  30173613 ataaaattttagagggatcaaaagcctaaagaaaattttagggggactaaaatcaaatattggtatatttagggaaactattttcttattt 30173703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 135
Target Start/End: Original strand, 4304325 - 4304398
Alignment:
Q  62 ccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||||||||||| || |||||||||||||    
T  4304325 ccaaaaatctaatgaatattttagagggactaaaatcaaatgttggtatatttagggagattatttacttattt 4304398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 131
Target Start/End: Complemental strand, 27614084 - 27614023
Alignment:
Q  70 ctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttactt 131  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  27614084 ctaaagaatattttatggagactaaaattaaatgttggtatatttaggggaactatttactt 27614023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 4475181 - 4475110
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| |||||||||||||||| ||| | |||||||||||||||||||||||||| ||||| |||||||||||    
T  4475181 aaaaccctaaagaatattttaggggaattaaaatcaaatgttggtatatttaggaggactttttacttattt 4475110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 2928177 - 2928099
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| ||||| ||| ||||||  ||||||| ||||||||||||||||||||||| |||| ||||||||||||    
T  2928177 agggaccaaaagcctaaggaaaattttagagggactagaatcaaatgttggtatatttaggaggaccatttacttattt 2928099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 45405073 - 45405151
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| |||| |||||||||||||||| |||||||||||||||||||| ||||||||| ||||||  || ||||||||    
T  45405073 agggactaaaagcctaaagaatattttagggggactaaaatcaaatgttagtatatttaaggggacagttaacttattt 45405151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 28725684 - 28725764
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtat---atttagggggactatttacttattt 135  Q
    ||||||||||||||||| |||||||||  || ||||||||||||||||||||||   |||||||||||| ||||||||||||    
T  28725684 agggaccaaaaacctaatgaatattttg-ggagactaaaatcaaatgttggtattatatttagggggaccatttacttattt 28725764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 34502685 - 34502619
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggact 123  Q
    |||||| |||| |||||| |||||||||| |||||||||||||||||||| |||||||||| |||||    
T  34502685 agggacgaaaagcctaaaaaatattttatagggactaaaatcaaatgttgatatatttaggaggact 34502619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 46 - 135
Target Start/End: Complemental strand, 4304237 - 4304148
Alignment:
Q  46 taaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| ||| | ||||||||| | |||  ||||||||| | |||||||||||||||||||||||||||| |||||| ||||| ||||||    
T  4304237 taaaattttagaaggaccaaaagcttaagaaatattttaggaggactaaaatcaaatgttggtatatttaaggggacgatttatttattt 4304148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 135
Target Start/End: Original strand, 6931119 - 6931191
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||  ||| |||||  ||||||||||||||||||| ||||||||| | |||||||||||||||||    
T  6931119 caaaaacctaagaaatgttttaaagggactaaaatcaaatgttagtatatttaagaggactatttacttattt 6931191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 19279965 - 19279905
Alignment:
Q  75 gaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||| |||  ||||||||||||||||||||| ||||||| |||| ||||||||||    
T  19279965 gaatattttaagggatctaaaatcaaatgttggtatacttaggggaactacttacttattt 19279905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 43907882 - 43907950
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||| || |||| || ||||||||||| ||||||||| ||||||||||||||||| || |||||||||    
T  43907882 aaaattttgaaggaacaaaaaacctaaaaaatattttagggggactaaaatcaaatattagtatattta 43907950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 44094315 - 44094391
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttat 133  Q
    ||||||||||| |||||  ||||||||  || |||||||||||||||||| |||||||| |||||| |||| |||||    
T  44094315 agggaccaaaaccctaagaaatattttcaggagactaaaatcaaatgttgatatatttaaggggaccatttgcttat 44094391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 8896036 - 8896098
Alignment:
Q  53 ttaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    |||||| |||||||| | |||||||||||||| || ||||||||| |||||||||| ||||||    
T  8896036 ttaaagagaccaaaagcttaaagaatattttagggagactaaaattaaatgttggtgtattta 8896098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 101
Target Start/End: Complemental strand, 29491450 - 29491409
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaatcaaa 101  Q
    |||||||||| |||||||||||||| ||||||||||||||||    
T  29491450 gaccaaaaacataaagaatattttagggggactaaaatcaaa 29491409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 4475282 - 4475346
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactattt 127  Q
    ||||||||||||||| ||||||  | || ||||||||||||||| |||||||||| | |||||||    
T  4475282 caaaaacctaaagaaaattttaaagtgattaaaatcaaatgttgatatatttaggagcactattt 4475346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 32618949 - 32619037
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||| || ||||| ||||| |||||||||    |||||||||||||||||| |||||||||  | |||||||||||||||    
T  32618949 aaaattttagaggaactaaaaatctaaaaaatattttagaaagactaaaatcaaatgttgatatatttagatgaactatttacttattt 32619037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 30430672 - 30430718
Alignment:
Q  89 gactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| |||| ||| ||||||||||||||| ||||||||||||    
T  30430672 gactaaaattaaatattgatatatttagggggaccatttacttattt 30430718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 111
Target Start/End: Complemental strand, 45404880 - 45404826
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtata 111  Q
    |||||||| ||| |||| |||||||||| || ||||||||||||||||| |||||    
T  45404880 agggaccagaaatctaaggaatattttagggagactaaaatcaaatgtttgtata 45404826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 10821913 - 10821864
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttg 106  Q
    ||||||||||| |||||| ||||||||| || ||||||||| ||||||||    
T  10821913 agggaccaaaagcctaaaaaatattttacggtgactaaaataaaatgttg 10821864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 25799512 - 25799572
Alignment:
Q  74 agaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||  | ||||||||| |||||||||||||||||||| | | ||||||||||||    
T  25799512 agaatattttaaagagactaaaattaaatgttggtatatttagggagtc-atttacttattt 25799572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 94 - 135
Target Start/End: Complemental strand, 28725324 - 28725283
Alignment:
Q  94 aaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| ||||||||||||||||| || ||||||||||||||||    
T  28725324 aaattaaatgttggtatatttatggtgactatttacttattt 28725283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Original strand, 34396901 - 34396938
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatatttta 84  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  34396901 aaaattttaaagggaccaaaaacctaaaaaatatttta 34396938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 44094239 - 44094174
Alignment:
Q  53 ttaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatg-ttggtatatttagg 117  Q
    ||||||||||||||| |||||  |||||||||   ||| |||||||||||| ||||||||||||||    
T  44094239 ttaaagggaccaaaagcctaagaaatattttagaaggattaaaatcaaatgtttggtatatttagg 44094174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 53 - 135
Target Start/End: Complemental strand, 27847944 - 27847862
Alignment:
Q  53 ttaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||||||| ||| |||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||    
T  27847944 ttaaagggaccaaaaacttaaggaatattttaagtggactaaaatcaaatgttggtatatttatggggactatttacttattt 27847862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 981080 - 981167
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  981080 aaaattttagagggaccaaaagcctaaagaatatttta-ggggactaaaatcaaatgttggtatatttagagagactatttacttattt 981167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 32945705 - 32945617
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| ||||| |||||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  32945705 aaaattttagagggatcaaaaatctaaataatattttatggggactaaaatcaaatgttggtatattttgggggactatttacctattt 32945617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 18509580 - 18509487
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattttaacccgatatattat 151  Q
    |||||||||||||| || ||||||||||  |||||||||||||||||||||||||||||||||||| ||||| ||| |||||||| |||||||||    
T  18509580 agggaccaaaaaccaaaggaatattttagagggactaaaatcaaatgttggtatatttagggggaccatttaatta-tttaaccctatatattat 18509487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 16128011 - 16127923
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||| |||||||||||||||| | ||||||||| | |||||||||| ||||||||||||||||| |||||||||||||||||||    
T  16128011 aaaattttagagggaccaaaaacctacataatattttaggaggactaaaattaaatgttggtatatttaaggggactatttacttattt 16127923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 7328471 - 7328548
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| |||||||||||||||||||||| |||||| ||||||||| |||||||||||| ||||||||||||||||    
T  7328471 agggaccaataacctaaagaatattttatggg-actaaagtcaaatgttagtatatttagggagactatttacttattt 7328548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 12874853 - 12874931
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||||||||||| |||||||||  |||||||||||||||| ||||||||||| ||  ||||||||||||||||    
T  12874853 agggaccaaaaacctaaataatattttagagggactaaaatcaaatattggtatatttgggaagactatttacttattt 12874931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 35926800 - 35926736
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttac 129  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  35926800 aaaaacctaaaaaatattttatggagactaaaatcaaatgttggtatattta-ggggactatttac 35926736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 25330636 - 25330565
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| |||||||| ||||||  |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  25330636 aaaaatctaaagaaaattttagagggactaaaatcaaatgttgatgtatttagggggactatttacttattt 25330565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 135
Target Start/End: Original strand, 20972396 - 20972473
Alignment:
Q  58 gggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||| ||||||||  ||||| ||| ||||||||    
T  20972396 gggaccaaaaacctaagaaatattttttggggactaaaatcaaatgttgatatatttaaagggaccattcacttattt 20972473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 16192588 - 16192664
Alignment:
Q  60 gaccaaaaa-cctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| ||||| |||||||||| || |||||||||||||||||| |||||||| | |||||||||||||||||    
T  16192588 gaccaaaaagcctaaggaatattttagggagactaaaatcaaatgttgatatatttaagaggactatttacttattt 16192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 4921336 - 4921414
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| ||||| ||||| ||||||||| ||||| ||||||||||||||| ||||||||| | ||||||||| ||||||    
T  4921336 agggacaaaaaatctaaaaaatattttaaggggattaaaatcaaatgttgatatatttagagagactatttatttattt 4921414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 37897658 - 37897580
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| ||||||||| ||||||||||  |||| ||||||||||||||||| |||||||| || |||||| |||||||    
T  37897658 agggaccgaaaacctaaggaatattttagagggagtaaaatcaaatgttggtctatttaggagggctatttccttattt 37897580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 115
Target Start/End: Original strand, 35926903 - 35926955
Alignment:
Q  63 caaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||||||    
T  35926903 caaaaacctaaaaaatattttattgagactaaaatcaaatgttggtatattta 35926955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 16126303 - 16126225
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| |||||| || | |||| |||| | |||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  16126303 agggacaaaaaacgtacataataatttaggaggactaaaattaaatgttggtatatttaaggggactgtttacttattt 16126225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 39159268 - 39159344
Alignment:
Q  57 agggaccaaaaacctaaagaatatttt-atggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| ||||||||||||||| ||||   ||||||||||||||| ||||||||| | |||||||| ||||||||    
T  39159268 agggaccaaaatcctaaagaatatttttatgg---ctaaaatcaaatgttagtatatttaagaggactattaacttattt 39159344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 37897727 - 37897803
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| |||||  ||||||||| | |||||||||  |||||||||||||||||| | |||| |||||||||||    
T  37897727 ggaccaaaagcctaagaaatattttaggaggactaaaacaaaatgttggtatatttagtgagactttttacttattt 37897803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 12874760 - 12874685
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||  |||| | ||||||||  ||||| ||||||||||||||||||||||||||  || ||||||||||||    
T  12874760 gaccaaaagtctaagggatattttaaagggaccaaaatcaaatgttggtatatttagggaaaccatttacttattt 12874685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 135
Target Start/End: Original strand, 39786493 - 39786567
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||  ||||| ||||||||| |||||||||||| ||||| |||||||||||  | ||||||||||||||||    
T  39786493 gaccaaaattctaaaaaatattttagggggactaaaattaaatgctggtatattta-tgagactatttacttattt 39786567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 105
Target Start/End: Complemental strand, 8185302 - 8185256
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgtt 105  Q
    ||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  8185302 ggaccaaaagcctaaataatattttagggggactaaaatcaaatgtt 8185256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 16126397 - 16126470
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| ||||||||||||||||||| || || ||||||||||| |||||||||||| | |||  ||||||||||||    
T  16126397 accagaaacctaaagaatatttta-ggcgattaaaatcaaattttggtatatttatgaggatcatttacttattt 16126470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 16333322 - 16333400
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| |||||| || | |||| |||| | ||| |||||| ||||||||||||||||| ||||||| |||||||||||    
T  16333322 agggacaaaaaacgtacataataatttaggaggattaaaattaaatgttggtatatttaaggggactgtttacttattt 16333400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 32483725 - 32483651
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| |||||| ||||||||||||| | |||||||||||||  |||||||||  || | |||||||||||||    
T  32483725 accaaaagcctaaaaaatattttatgggaattaaaatcaaatgtcagtatatttaaaggaattatttacttattt 32483651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 43130316 - 43130393
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||||| ||||| ||| |||||   |||||| ||||||||||| ||||||||||||| ||| ||||||||||||    
T  43130316 agggaccaaaagcctaaggaaaattttggagggactgaaatcaaatgt-ggtatatttagggagaccatttacttattt 43130393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 981000 - 980924
Alignment:
Q  58 gggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||||||| |||||  ||||||||| | ||||||||||||||||||| ||||||||  ||||  ||||||||||||    
T  981000 gggaccaaaagcctaagaaatatttta-gaggactaaaatcaaatgttgatatatttaaagggatcatttacttattt 980924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 4921252 - 4921179
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttact 130  Q
    ||||||||||| | ||| |||||||||| ||| | ||||||||||| |||||||||||||| | || |||||||    
T  4921252 agggaccaaaagcttaaggaatattttaagggaattaaaatcaaatattggtatatttaggagaacaatttact 4921179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 74 - 115
Target Start/End: Complemental strand, 26859248 - 26859208
Alignment:
Q  74 agaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  26859248 agaatatttta-ggggactaaaatcaaatgttggtatattta 26859208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 32945792 - 32945845
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagg 117  Q
    ||||||||| ||||||||||||||  | ||||||||||| ||||||||||||||    
T  32945792 aaaaacctagagaatattttatggaaattaaaatcaaattttggtatatttagg 32945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 118
Target Start/End: Complemental strand, 18560566 - 18560518
Alignment:
Q  70 ctaaagaatattttatggggactaaaatcaaatgttggtatatttaggg 118  Q
    |||| |||||||||| || |||||||||||||||||| |||||||||||    
T  18560566 ctaaggaatattttaaggagactaaaatcaaatgttgatatatttaggg 18560518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 26403086 - 26403030
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 116  Q
    |||||||| ||| |||||||||||| ||||||||||||||||| ||  |||||||||    
T  26403086 gaccaaaagcctgaagaatattttagggggactaaaatcaaattttaatatatttag 26403030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 30714192 - 30714132
Alignment:
Q  70 ctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttact 130  Q
    ||||| ||||||||| |  |||||||||||||||||| |||||||| |||||| |||||||    
T  30714192 ctaaaaaatattttaagaagactaaaatcaaatgttgatatatttaaggggaccatttact 30714132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 135
Target Start/End: Complemental strand, 39786396 - 39786321
Alignment:
Q  60 gaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||  |||| ||| ||||||  | |||||||||||||||||||||||||||   ||| |||||||||||||    
T  39786396 gaccaaaagtctaaggaaaattttagcgagactaaaatcaaatgttggtatatttaataggattatttacttattt 39786321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 16333228 - 16333155
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||| ||||||||||||||||||| || || ||||||||||| ||| |||||||| | |||  ||||||||||||    
T  16333228 accagaaacctaaagaatatttta-ggcgattaaaatcaaattttgatatatttatgaggatcatttacttattt 16333155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 128
Target Start/End: Original strand, 24225551 - 24225617
Alignment:
Q  62 ccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactattta 128  Q
    |||||||||||||||||||||||||  || ||||||||||| ||  ||||||| | ||||| |||||    
T  24225551 ccaaaaacctaaagaatattttatgaagattaaaatcaaatattaatatattttgagggaccattta 24225617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 27848005 - 27848063
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||||||||| | |||  |||||||||  | |||||||||||||||||||||||||||    
T  27848005 agggaccaaaagcttaagtaatattttaaagagactaaaatcaaatgttggtatattta 27848063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 17368873 - 17368921
Alignment:
Q  87 gggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||| ||||||||||||||||||||||| || ||| || |||||||||    
T  17368873 gggaccaaaatcaaatgttggtatatttaaggagaccatatacttattt 17368921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 115
Target Start/End: Complemental strand, 39751314 - 39751274
Alignment:
Q  75 gaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    |||||||||| ||| ||||||||||||| ||||||||||||    
T  39751314 gaatattttaagggaactaaaatcaaatattggtatattta 39751274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 63998 - 64076
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    |||||| ||||||||||| ||||||||| ||| |||||||| |||||||||||||||||||| ||||||||||| ||||    
T  63998 agggactaaaaacctaaataatattttaggggaactaaaattaaatgttggtatatttagggagactatttactgattt 64076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 63918 - 63851
Alignment:
Q  47 aaaatattaaagggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 116  Q
    ||||| |||||| ||||||||||||| |||| ||||||| ||||||||||||||||||| ||||||||||    
T  63918 aaaattttaaagagaccaaaaacctatagaaaattttat-gggactaaaatcaaatgtt-gtatatttag 63851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 30732 - 30802
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttac 129  Q
    ||||||||||| |||| ||||||||  || |||||||||||||||||  |||||||| || ||||||||||    
T  30732 ggaccaaaaacttaaataatatttttaggagactaaaatcaaatgttattatatttaaggagactatttac 30802  T

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Target: scaffold0042; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 30392 - 30316
Alignment:
Q  59 ggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||||| | |||  ||||||||  || ||||||||||||||||| ||||||||| |||||| ||| ||||||||    
T  30392 ggaccaaaagcttaagtaatatttttaggagactaaaatcaaatgttagtatatttatggggaccattcacttattt 30316  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 27080 - 27006
Alignment:
Q  61 accaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttagggggactatttacttattt 135  Q
    ||||||| |||||| ||||||||| | |||||||||| ||| |||| |||||||||||| || ||||| ||||||    
T  27080 accaaaagcctaaataatattttaggaggactaaaattaaacgttgatatatttaggggaaccatttagttattt 27006  T

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Target: scaffold0328 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Original strand, 11625 - 11683
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    |||||||||||||||||  |||||||||  | |||||||||||||| || |||||||||    
T  11625 agggaccaaaaacctaagaaatattttagagtgactaaaatcaaatattcgtatattta 11683  T

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Target: scaffold0328; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 11085 - 11033
Alignment:
Q  64 aaaaacctaaagaatattttatggggactaaaatcaaatgttggtatatttag 116  Q
    ||||| |||||||||||||||  || ||||||||||| |||| ||||||||||    
T  11085 aaaaatctaaagaatattttaaaggaactaaaatcaactgttagtatatttag 11033  T

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Target: scaffold0129 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 6354 - 6296
Alignment:
Q  57 agggaccaaaaacctaaagaatattttatggggactaaaatcaaatgttggtatattta 115  Q
    ||||||||||| ||||||||||||||||    || | ||||||||||||||||||||||    
T  6354 agggaccaaaaccctaaagaatattttagaaagattgaaatcaaatgttggtatattta 6296  T

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