View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1002-Insertion-6 (Length: 738)

Name: NF1002-Insertion-6
Description: NF1002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1002-Insertion-6
NF1002-Insertion-6
[»] chr5 (51 HSPs)
chr5 (9-699)||(2211128-2211815)
chr5 (11-366)||(2198793-2199150)
chr5 (381-565)||(35040861-35041045)
chr5 (379-563)||(35781642-35781825)
chr5 (374-599)||(1349524-1349748)
chr5 (379-565)||(38184166-38184351)
chr5 (379-565)||(38214006-38214191)
chr5 (379-598)||(40591185-40591406)
chr5 (388-598)||(5246398-5246605)
chr5 (379-599)||(28793877-28794094)
chr5 (386-565)||(4727888-4728068)
chr5 (397-561)||(35040047-35040211)
chr5 (374-597)||(5249220-5249440)
chr5 (392-599)||(19134645-19134852)
chr5 (379-565)||(20515321-20515507)
chr5 (379-484)||(35041633-35041738)
chr5 (379-495)||(36197553-36197669)
chr5 (379-496)||(35041402-35041519)
chr5 (380-480)||(34383255-34383355)
chr5 (379-518)||(35041234-35041373)
chr5 (379-596)||(35781257-35781458)
chr5 (379-599)||(35040406-35040611)
chr5 (380-484)||(6538145-6538249)
chr5 (379-482)||(30054584-30054686)
chr5 (379-485)||(17367607-17367713)
chr5 (381-482)||(6429606-6429707)
chr5 (436-599)||(12545887-12546049)
chr5 (379-447)||(35041908-35041976)
chr5 (379-480)||(38494368-38494470)
chr5 (379-441)||(25458332-25458394)
chr5 (409-592)||(1349146-1349326)
chr5 (379-431)||(18585569-18585621)
chr5 (385-447)||(27124250-27124312)
chr5 (519-599)||(19135030-19135110)
chr5 (508-599)||(34383382-34383471)
chr5 (410-465)||(35038923-35038979)
chr5 (514-565)||(43582984-43583033)
chr5 (380-455)||(19950609-19950684)
chr5 (379-431)||(17342370-17342423)
chr5 (513-570)||(18585688-18585745)
chr5 (516-565)||(35039764-35039813)
chr5 (379-431)||(12546040-12546092)
chr5 (436-496)||(17342414-17342474)
chr5 (641-679)||(6429392-6429430)
chr5 (641-679)||(19135168-19135206)
chr5 (508-599)||(6429489-6429579)
chr5 (389-446)||(19170418-19170475)
chr5 (379-436)||(25095740-25095797)
chr5 (379-436)||(25153710-25153767)
chr5 (515-599)||(25458526-25458608)
chr5 (640-699)||(35781517-35781578)
[»] chr1 (63 HSPs)
chr1 (379-599)||(6844336-6844554)
chr1 (379-599)||(33674853-33675071)
chr1 (379-599)||(43325957-43326175)
chr1 (379-599)||(24686063-24686284)
chr1 (379-599)||(33240953-33241170)
chr1 (390-599)||(17054112-17054318)
chr1 (379-565)||(11981586-11981771)
chr1 (382-599)||(43114959-43115173)
chr1 (369-565)||(6614293-6614488)
chr1 (379-565)||(47795466-47795651)
chr1 (381-528)||(10065983-10066131)
chr1 (366-565)||(47795796-47795995)
chr1 (392-596)||(6318792-6318997)
chr1 (402-599)||(48738391-48738586)
chr1 (379-598)||(49243654-49243869)
chr1 (379-482)||(33813376-33813479)
chr1 (379-482)||(33872846-33872949)
chr1 (379-482)||(47793195-47793298)
chr1 (379-553)||(52404219-52404394)
chr1 (379-533)||(47794658-47794812)
chr1 (385-562)||(42429472-42429651)
chr1 (379-598)||(45807860-45808072)
chr1 (379-496)||(39842667-39842783)
chr1 (383-565)||(46675732-46675909)
chr1 (379-448)||(10338307-10338376)
chr1 (375-482)||(47882181-47882289)
chr1 (427-599)||(47795057-47795226)
chr1 (379-431)||(42834765-42834817)
chr1 (382-561)||(6941636-6941809)
chr1 (379-431)||(43114633-43114685)
chr1 (380-432)||(47795749-47795801)
chr1 (379-433)||(47795658-47795712)
chr1 (434-598)||(47796215-47796378)
chr1 (379-427)||(6941241-6941289)
chr1 (379-431)||(49480392-49480444)
chr1 (436-599)||(42834839-42834998)
chr1 (379-447)||(6319170-6319238)
chr1 (379-427)||(11335820-11335868)
chr1 (379-427)||(11493839-11493887)
chr1 (381-599)||(45296770-45296973)
chr1 (379-431)||(47796643-47796695)
chr1 (384-431)||(26271825-26271872)
chr1 (389-475)||(35187751-35187837)
chr1 (394-431)||(7562023-7562060)
chr1 (381-446)||(8298421-8298486)
chr1 (390-565)||(8795409-8795583)
chr1 (437-496)||(11982093-11982152)
chr1 (405-439)||(29300848-29300882)
chr1 (436-481)||(7561987-7562032)
chr1 (436-481)||(24705347-24705392)
chr1 (504-591)||(26271931-26272017)
chr1 (436-496)||(47796592-47796652)
chr1 (379-447)||(47796702-47796769)
chr1 (507-566)||(9626180-9626239)
chr1 (379-410)||(12016775-12016806)
chr1 (422-469)||(45378251-45378298)
chr1 (389-480)||(214457-214550)
chr1 (504-565)||(6318694-6318756)
chr1 (508-565)||(43114747-43114805)
chr1 (443-484)||(6941291-6941332)
chr1 (641-678)||(42429756-42429793)
chr1 (537-593)||(47794817-47794871)
chr1 (504-565)||(49480273-49480334)
[»] chr4 (59 HSPs)
chr4 (379-599)||(54175710-54175927)
chr4 (379-599)||(7238891-7239109)
chr4 (379-599)||(9518898-9519112)
chr4 (379-599)||(19298516-19298736)
chr4 (379-599)||(2494078-2494297)
chr4 (379-565)||(27838995-27839182)
chr4 (379-599)||(41692308-41692526)
chr4 (379-599)||(43495700-43495925)
chr4 (379-599)||(49897354-49897570)
chr4 (379-599)||(660043-660260)
chr4 (379-565)||(12928425-12928611)
chr4 (366-496)||(54806949-54807079)
chr4 (379-484)||(32500136-32500241)
chr4 (379-480)||(39136150-39136251)
chr4 (379-484)||(5029088-5029193)
chr4 (379-565)||(36889705-36889891)
chr4 (379-479)||(36638694-36638793)
chr4 (379-484)||(49866980-49867085)
chr4 (390-482)||(45032320-45032412)
chr4 (379-458)||(16877054-16877133)
chr4 (379-475)||(7070601-7070697)
chr4 (385-485)||(39476299-39476397)
chr4 (380-481)||(53140136-53140236)
chr4 (379-599)||(44886061-44886265)
chr4 (379-431)||(660466-660518)
chr4 (379-431)||(13222071-13222123)
chr4 (379-431)||(24739219-24739271)
chr4 (379-435)||(29100711-29100767)
chr4 (379-447)||(42746904-42746968)
chr4 (380-431)||(42816128-42816179)
chr4 (508-565)||(53130887-53130944)
chr4 (379-431)||(16435943-16435995)
chr4 (383-431)||(41103892-41103940)
chr4 (396-533)||(42314487-42314626)
chr4 (388-565)||(50715573-50715737)
chr4 (388-469)||(40796224-40796305)
chr4 (436-595)||(41103931-41104087)
chr4 (409-447)||(31837767-31837805)
chr4 (378-435)||(46255090-46255145)
chr4 (379-435)||(42881922-42881979)
chr4 (422-482)||(37243565-37243624)
chr4 (382-441)||(2494726-2494785)
chr4 (379-432)||(27271672-27271726)
chr4 (385-469)||(53130968-53131054)
chr4 (516-565)||(4780686-4780735)
chr4 (390-431)||(11125146-11125187)
chr4 (380-449)||(17554896-17554964)
chr4 (451-552)||(24739112-24739214)
chr4 (447-533)||(29100765-29100851)
chr4 (398-455)||(37813188-37813244)
chr4 (436-496)||(46255132-46255192)
chr4 (379-480)||(1184350-1184452)
chr4 (641-679)||(7238785-7238823)
chr4 (158-227)||(4145259-4145328)
chr4 (512-557)||(7070518-7070563)
chr4 (398-455)||(10117967-10118024)
chr4 (381-414)||(28450674-28450707)
chr4 (508-565)||(29618243-29618300)
chr4 (512-565)||(32640758-32640811)
[»] chr8 (54 HSPs)
chr8 (380-599)||(35308136-35308355)
chr8 (379-599)||(6007546-6007764)
chr8 (379-599)||(5764755-5764973)
chr8 (379-598)||(15199604-15199821)
chr8 (379-565)||(13916412-13916593)
chr8 (379-495)||(1153766-1153882)
chr8 (379-595)||(17072983-17073198)
chr8 (379-595)||(17575072-17575287)
chr8 (379-565)||(27882481-27882667)
chr8 (379-565)||(28022661-28022847)
chr8 (380-565)||(342712-342897)
chr8 (379-565)||(40737293-40737486)
chr8 (414-599)||(28828030-28828215)
chr8 (384-568)||(24981386-24981571)
chr8 (390-562)||(27964698-27964872)
chr8 (418-565)||(1030294-1030441)
chr8 (379-480)||(4443849-4443951)
chr8 (389-568)||(28022256-28022423)
chr8 (382-482)||(339730-339830)
chr8 (389-568)||(27882075-27882243)
chr8 (431-599)||(5424697-5424864)
chr8 (380-595)||(5424492-5424689)
chr8 (431-565)||(6007955-6008089)
chr8 (379-480)||(11464606-11464707)
chr8 (379-599)||(32795259-32795475)
chr8 (379-454)||(27965810-27965885)
chr8 (379-565)||(27917424-27917596)
chr8 (379-565)||(27963843-27964015)
chr8 (423-599)||(17073204-17073379)
chr8 (423-599)||(17574891-17575066)
chr8 (436-565)||(27881244-27881373)
chr8 (436-565)||(28021425-28021554)
chr8 (389-484)||(7284934-7285033)
chr8 (379-433)||(35102735-35102789)
chr8 (436-599)||(40796179-40796342)
chr8 (379-435)||(27881201-27881257)
chr8 (379-435)||(28021382-28021438)
chr8 (391-474)||(28152350-28152434)
chr8 (379-431)||(33489493-33489545)
chr8 (391-434)||(5424259-5424302)
chr8 (398-453)||(18969454-18969509)
chr8 (431-530)||(5765438-5765537)
chr8 (398-480)||(18947003-18947085)
chr8 (171-237)||(41931049-41931115)
chr8 (386-422)||(28828531-28828567)
chr8 (383-431)||(40796333-40796381)
chr8 (380-427)||(45045540-45045587)
chr8 (379-417)||(5765544-5765582)
chr8 (383-433)||(6007489-6007539)
chr8 (387-429)||(17072756-17072798)
chr8 (387-429)||(17575473-17575515)
chr8 (166-240)||(1310124-1310198)
chr8 (504-533)||(4443963-4443992)
chr8 (380-433)||(44964241-44964293)
[»] chr3 (57 HSPs)
chr3 (380-599)||(21388414-21388631)
chr3 (379-599)||(54356143-54356362)
chr3 (379-599)||(10332975-10333194)
chr3 (379-595)||(7433598-7433812)
chr3 (379-599)||(8707893-8708111)
chr3 (379-599)||(9059780-9059998)
chr3 (379-599)||(40285037-40285254)
chr3 (379-562)||(24485623-24485807)
chr3 (379-596)||(11632938-11633154)
chr3 (379-533)||(34795099-34795252)
chr3 (379-565)||(3942604-3942787)
chr3 (379-597)||(12100937-12101152)
chr3 (379-530)||(26863088-26863239)
chr3 (391-565)||(26167913-26168088)
chr3 (384-599)||(26760446-26760658)
chr3 (379-482)||(23027649-23027752)
chr3 (374-595)||(21459481-21459703)
chr3 (396-561)||(47567788-47567954)
chr3 (379-495)||(16106122-16106238)
chr3 (379-482)||(44869071-44869174)
chr3 (391-599)||(45585980-45586193)
chr3 (435-599)||(54981819-54981980)
chr3 (431-533)||(54981664-54981766)
chr3 (396-480)||(30917638-30917722)
chr3 (379-458)||(10332845-10332923)
chr3 (379-494)||(23027884-23027990)
chr3 (379-454)||(44077887-44077962)
chr3 (379-441)||(10296972-10297034)
chr3 (504-599)||(24842476-24842568)
chr3 (379-431)||(54142889-54142941)
chr3 (379-456)||(25250441-25250518)
chr3 (512-599)||(46515033-46515118)
chr3 (514-596)||(10297423-10297503)
chr3 (379-441)||(10309608-10309670)
chr3 (380-425)||(33832703-33832748)
chr3 (515-568)||(33832809-33832862)
chr3 (505-562)||(42583594-42583651)
chr3 (508-568)||(3789734-3789794)
chr3 (448-565)||(10332711-10332825)
chr3 (504-639)||(47567591-47567724)
chr3 (448-599)||(10297201-10297350)
chr3 (379-468)||(42583484-42583567)
chr3 (384-422)||(46514887-46514925)
chr3 (398-455)||(14900475-14900532)
chr3 (436-485)||(27245904-27245953)
chr3 (508-599)||(30498432-30498521)
chr3 (504-599)||(54142993-54143086)
chr3 (510-565)||(1476767-1476822)
chr3 (379-430)||(23302073-23302124)
chr3 (537-595)||(30917800-30917856)
chr3 (641-679)||(3942460-3942498)
chr3 (519-596)||(10317246-10317321)
chr3 (382-428)||(40459863-40459909)
chr3 (539-569)||(43185627-43185657)
chr3 (508-565)||(54585859-54585917)
chr3 (380-413)||(30498613-30498646)
chr3 (390-459)||(52573220-52573288)
[»] chr6 (22 HSPs)
chr6 (379-678)||(7204717-7205023)
chr6 (379-599)||(21980782-21981000)
chr6 (374-598)||(33438534-33438755)
chr6 (397-599)||(2258701-2258901)
chr6 (379-597)||(26001251-26001463)
chr6 (387-593)||(14094064-14094265)
chr6 (418-533)||(3307407-3307522)
chr6 (390-480)||(21091898-21091987)
chr6 (374-533)||(20469387-20469532)
chr6 (379-433)||(24007044-24007098)
chr6 (390-487)||(20609407-20609506)
chr6 (382-425)||(891149-891192)
chr6 (383-481)||(22533563-22533662)
chr6 (432-599)||(26209049-26209215)
chr6 (432-591)||(10780177-10780334)
chr6 (378-431)||(10780321-10780374)
chr6 (389-431)||(26209020-26209062)
chr6 (427-529)||(24006934-24007036)
chr6 (190-229)||(5730197-5730236)
chr6 (389-455)||(8116345-8116412)
chr6 (408-455)||(26277587-26277634)
chr6 (395-428)||(5678842-5678875)
[»] chr2 (51 HSPs)
chr2 (379-599)||(14787075-14787294)
chr2 (380-595)||(42676341-42676554)
chr2 (379-565)||(21479281-21479468)
chr2 (379-595)||(15458820-15459035)
chr2 (379-525)||(31667387-31667533)
chr2 (374-482)||(24545746-24545854)
chr2 (379-598)||(9420132-9420350)
chr2 (379-481)||(34454000-34454102)
chr2 (374-591)||(36950336-36950553)
chr2 (379-532)||(37201527-37201679)
chr2 (379-565)||(38722726-38722908)
chr2 (402-599)||(3255999-3256197)
chr2 (379-599)||(40662750-40662953)
chr2 (379-465)||(30620480-30620566)
chr2 (379-465)||(30623101-30623187)
chr2 (379-564)||(7495474-7495644)
chr2 (379-470)||(11667078-11667169)
chr2 (387-449)||(43004795-43004857)
chr2 (374-431)||(21479091-21479148)
chr2 (380-445)||(43968330-43968394)
chr2 (379-596)||(43968562-43968763)
chr2 (374-435)||(41347450-41347511)
chr2 (411-465)||(30632162-30632216)
chr2 (508-597)||(43968210-43968297)
chr2 (436-593)||(7074897-7075052)
chr2 (379-480)||(9977794-9977899)
chr2 (379-458)||(18297028-18297107)
chr2 (516-595)||(30632215-30632292)
chr2 (379-431)||(30668785-30668837)
chr2 (379-431)||(39844362-39844414)
chr2 (380-431)||(30666203-30666254)
chr2 (379-429)||(645370-645420)
chr2 (379-424)||(40662982-40663027)
chr2 (379-447)||(34453627-34453695)
chr2 (516-598)||(30666273-30666353)
chr2 (379-433)||(27719809-27719863)
chr2 (389-431)||(44833304-44833346)
chr2 (374-431)||(7075043-7075100)
chr2 (507-599)||(39844212-39844302)
chr2 (516-598)||(34454177-34454257)
chr2 (426-485)||(42679532-42679591)
chr2 (422-565)||(1826675-1826817)
chr2 (510-599)||(20612700-20612787)
chr2 (508-565)||(3196995-3197052)
chr2 (504-565)||(21479209-21479270)
chr2 (379-424)||(40663055-40663099)
chr2 (447-525)||(41347374-41347452)
chr2 (407-455)||(559415-559463)
chr2 (516-599)||(30668856-30668937)
chr2 (165-240)||(28804329-28804404)
chr2 (379-409)||(932767-932797)
[»] chr7 (69 HSPs)
chr7 (366-599)||(44434682-44434914)
chr7 (374-565)||(24689209-24689401)
chr7 (379-597)||(33857999-33858216)
chr7 (379-565)||(21696825-21697010)
chr7 (418-599)||(26246628-26246807)
chr7 (379-565)||(1644408-1644593)
chr7 (380-599)||(26970594-26970814)
chr7 (379-595)||(23808938-23809152)
chr7 (379-482)||(15640242-15640345)
chr7 (379-599)||(35526354-35526572)
chr7 (379-458)||(47222647-47222726)
chr7 (379-565)||(4399534-4399720)
chr7 (427-565)||(5801076-5801215)
chr7 (379-599)||(30121918-30122122)
chr7 (379-479)||(15641111-15641211)
chr7 (389-553)||(45447624-45447787)
chr7 (379-496)||(28974816-28974933)
chr7 (431-599)||(24688788-24688954)
chr7 (388-560)||(14312497-14312667)
chr7 (379-482)||(29102551-29102654)
chr7 (379-565)||(10282513-10282685)
chr7 (379-445)||(22644703-22644769)
chr7 (379-565)||(24162207-24162379)
chr7 (385-494)||(37986099-37986206)
chr7 (389-480)||(10282797-10282888)
chr7 (379-458)||(30122259-30122338)
chr7 (384-458)||(19611022-19611095)
chr7 (379-599)||(23640757-23640960)
chr7 (379-431)||(35223674-35223726)
chr7 (504-599)||(38319943-38320036)
chr7 (379-466)||(26178160-26178247)
chr7 (388-480)||(12216852-12216945)
chr7 (421-518)||(24689614-24689711)
chr7 (380-480)||(26127835-26127935)
chr7 (379-433)||(15640424-15640478)
chr7 (387-480)||(10282986-10283079)
chr7 (374-431)||(11485838-11485895)
chr7 (504-599)||(47222539-47222633)
chr7 (504-599)||(40261908-40262001)
chr7 (379-434)||(1644768-1644823)
chr7 (379-482)||(26151289-26151391)
chr7 (504-599)||(10283301-10283394)
chr7 (504-599)||(26970416-26970509)
chr7 (379-446)||(35526765-35526833)
chr7 (394-489)||(11749931-11750025)
chr7 (422-465)||(40261848-40261891)
chr7 (380-430)||(4594660-4594710)
chr7 (391-470)||(29834466-29834547)
chr7 (381-431)||(32988467-32988517)
chr7 (166-240)||(38622872-38622946)
chr7 (390-431)||(38319868-38319909)
chr7 (383-435)||(29854560-29854612)
chr7 (379-431)||(31277316-31277368)
chr7 (508-598)||(21696475-21696562)
chr7 (537-599)||(29854709-29854769)
chr7 (382-482)||(35527349-35527441)
chr7 (383-420)||(1067210-1067247)
chr7 (446-495)||(4594609-4594658)
chr7 (398-455)||(16174944-16175001)
chr7 (504-565)||(46897939-46898000)
chr7 (436-496)||(31277359-31277419)
chr7 (420-459)||(35525817-35525856)
chr7 (462-533)||(11485913-11485984)
chr7 (380-422)||(15641659-15641701)
chr7 (512-562)||(18984714-18984764)
chr7 (512-562)||(18989529-18989579)
chr7 (512-562)||(18999343-18999393)
chr7 (429-482)||(5373050-5373103)
chr7 (504-561)||(30122177-30122234)
[»] scaffold0016 (3 HSPs)
scaffold0016 (374-599)||(205116-205337)
scaffold0016 (436-599)||(106072-106233)
scaffold0016 (379-431)||(106224-106275)
[»] scaffold0006 (1 HSPs)
scaffold0006 (379-482)||(71483-71586)
[»] scaffold0224 (2 HSPs)
scaffold0224 (379-431)||(21846-21898)
scaffold0224 (436-599)||(21920-22079)
[»] scaffold0376 (1 HSPs)
scaffold0376 (430-482)||(2058-2110)
[»] scaffold0267 (1 HSPs)
scaffold0267 (517-568)||(3243-3294)
[»] scaffold0024 (1 HSPs)
scaffold0024 (508-599)||(150191-150280)
[»] scaffold0625 (1 HSPs)
scaffold0625 (512-562)||(7182-7232)
[»] scaffold0283 (1 HSPs)
scaffold0283 (380-433)||(10375-10427)


Alignment Details
Target: chr5 (Bit Score: 472; Significance: 0; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 472; E-Value: 0
Query Start/End: Original strand, 9 - 699
Target Start/End: Complemental strand, 2211815 - 2211128
Alignment:
Q  9 cgtccacaatctctcggctaccaagcataggattatttggatatttctcaacagacaatctgtaaaagcactgatacaattagaactgaaacgattaatt 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2211815 cgtccacaatctctcggctaccaagcataggattatttggatatttctcaacagacaatctgtaaaagcactgatacaattagaactgaaacgactaatt 2211716  T
Q  109 tcttatcaatacaggtccaaatttttgctagtgttgttaaaaagcagaactatagtatagcagaatttgaagaaataggtattgttccatgataagctat 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2211715 tcttatcaatacaggtccaaatttttgctagtgttgttaaaaagcaaaactatagtatagcagaatttgaagaaataggtattgttccatgataagctat 2211616  T
Q  209 tt---attacaaaatcttgtcaaacagcggctatacgacgttatagcagaatttaaaaaacctctatttgtcgcgatctgcacatacaacacttattttc 305  Q
    ||   |||||||||||||||||||||||||||||||||||||||| |||         ||||||||||||||||||||||||||||||||||||||||||    
T  2211615 ttattattacaaaatcttgtcaaacagcggctatacgacgttataacag---------aacctctatttgtcgcgatctgcacatacaacacttattttc 2211525  T
Q  306 ttttaacattaacttaaactgaagtaatacatgacttatacttagtccaaaatcgagccaagattaaaggctggtttgttacggattaaaataaaagtga 405  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2211524 ttttaacattaacttaaactgaagtaatacatgacttatacttagtccaaaatcgagccaaaattaaaggctggtttgttacggattaaaataaaagtga 2211425  T
Q  406 ttttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttac----gtttgtttaccgtactaagaatcacnnnnn 501  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    ||||||||||||||                    
T  2211424 ttttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgtttgtttaccgta---------------- 2211341  T
Q  502 nnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctccac 601  Q
      |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  2211340 -taaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaa--tttaatattttaaaccatattttctctctccac 2211244  T
Q  602 tnnnnnnnntctattttttctagaaactgctcttaaca------------------gtttttagattctgattttattaaaaagcagtaacaaacgatgc 683  Q
    |        |||||||||||||||||||||||||||||                  ||||||||||||||||||||||||||||  ||||||||||||||    
T  2211243 taaaaaaaatctattttttctagaaactgctcttaacagtttcttattaagaaactgtttttagattctgattttattaaaaagtggtaacaaacgatgc 2211144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 366
Target Start/End: Complemental strand, 2199150 - 2198793
Alignment:
Q  11 tccacaatctctcggctaccaagcataggattatttggatatttctcaacagacaatctgtaaaagcactgatacaattagaactgaaacgattaatttc 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||| ||    
T  2199150 tccacaatctctcggctaccaagcataggattatttggatatttctcaacagacaatctgtaaaagcactgatacaatcagaactgaaacggctaatgtc 2199051  T
Q  111 ttatcaatacaggtccaaatttttgctagtgttgttaaaaagcagaactatagtatagcagaatttgaagaaataggtattgttccatgataagctattt 210  Q
    |||| |||||| ||||||||||||||||||||||||||||||| |||| | |||||| ||||||| |||||||||| ||||||| ||| |||||||||||    
T  2199050 ttattaatacatgtccaaatttttgctagtgttgttaaaaagcggaacaacagtataacagaattcgaagaaatagttattgtttcataataagctattt 2198951  T
Q  211 attacaaaatcttgtcaaacagcggctatacgacgttatagcagaatttaaa-aaacctctatttgtcgcga--tctgcacatacaacacttattttctt 307  Q
    ||||||||||||||||||| ||||||||||| | |||||| ||||||||||| |||||| ||||||| ||||  | ||   | ||||||| |||||||||    
T  2198950 attacaaaatcttgtcaaatagcggctatactatgttataacagaatttaaacaaacctttatttgtggcgaactgtgataaaacaacacatattttctt 2198851  T
Q  308 ttaacattaacttaaactgaagtaatacatgacttatacttagtccaaaatcgagccaa 366  Q
    |||||| ||||| ||| |||||||| |||||||| ||| ||||||||||||||| ||||    
T  2198850 ttaaca-taactaaaaatgaagtaacacatgactcatatttagtccaaaatcgatccaa 2198793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 381 - 565
Target Start/End: Original strand, 35040861 - 35041045
Alignment:
Q  381 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  35040861 ttgttacagattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgttta 35040960  T
Q  481 ccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||| ||| ||||||       ||||||||||| ||||||||| ||||||||   |||||| |||||||| |||||||||||||    
T  35040961 ccgtaataaaaatcacttttttaaaacaaataatctagtttgttaggatacaactatataaatgagattttatgttacaaaatta 35041045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 379 - 563
Target Start/End: Complemental strand, 35781825 - 35781642
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  35781825 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagaggttttgtgaaaaatcagaatctattttacgtttgtt 35781726  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaat 563  Q
    |||||||  || ||||||       |||||||||||||||||||||| |||||||   |||||||| ||||||||||||||||||    
T  35781725 taccgtaacaaaaatcac-ttttttaaacaaataatttagtttgttttgatacaactatataaaagggattttttgttacaaaat 35781642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 374 - 599
Target Start/End: Original strand, 1349524 - 1349748
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacg- 472  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||| ||||||||| ||     
T  1349524 ggctcgtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatattttagagactttataaaaactcagaatctattttgcgt 1349623  T
Q  473 tttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaattttta 572  Q
    ||||||||| ||| ||| |||||        ||||||||||| ||||||||||||||||||   |||||||| ||||||||||||||||||||   || |    
T  1349624 tttgtttactgtaataaaaatcatttttttaaaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatta--gttca 1349721  T
Q  573 atattttaaaccatattttctctctcc 599  Q
    || ||||||| ||||||||||||||||    
T  1349722 atcttttaaatcatattttctctctcc 1349748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 38184166 - 38184351
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||    
T  38184166 gtttgttacgaaataaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaattagaatttattttccgtttgtt 38184265  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||| ||  || ||||||       |||||||||||||||||||||||| |||||   |||||||| ||||||||||||||||||||    
T  38184266 taccataagaaaaatcacttttttaaaacaaataatttagtttgtttgggtacaactatataaaag-gattttttgttacaaaatta 38184351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 38214191 - 38214006
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||| ||||||||    
T  38214191 gtttgttacgaaataaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaattagaatttattttccgtttgtt 38214092  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||| ||  || ||||||       |||||||||||||||||||||||| |||||   |||||||| ||||||||||||||||||||    
T  38214091 taccataagaaaaatcacttttttaaaacaaataatttagtttgtttgggtacaactatataaaag-gattttttgttacaaaatta 38214006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 379 - 598
Target Start/End: Original strand, 40591185 - 40591406
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttac----gtt 474  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||||| |    |||    
T  40591185 gtttgttacggattaaaataaaagtgattttgacataaattaatttagagattatattttagagattttatgaaaaatcagaatttattttgcgtttgtt 40591284  T
Q  475 tgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaattaatttttaa 573  Q
    |||||| |||| ||| ||||||       |||||||| ||||||||||||||||||| ||||  |||||| || ||||||||||||||||||   |  ||    
T  40591285 tgtttaacgtaataaaaatcacttttattaaacaaatcatttagtttgtttggatac-aactattaaaagggatttttttgttacaaaatta--gtacaa 40591381  T
Q  574 tattttaaaccatattttctctctc 598  Q
    | |||||||||||||||||||||||    
T  40591382 ttttttaaaccatattttctctctc 40591406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 388 - 598
Target Start/End: Original strand, 5246398 - 5246605
Alignment:
Q  388 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtact 487  Q
    |||||||||||||| | ||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||  ||||||||| |||| |    
T  5246398 ggattaaaataaaaataattttgacataaaataatttagagattgtattttatagattt-atgaaaaatcagaatctattttgtgtttgtttatcgtaat 5246496  T
Q  488 aagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccata 587  Q
    || ||||||       ||||||||||||||||||||||||||||||   ||||||||||||||||| |||||||||||   || ||| ||||||||| ||    
T  5246497 aaaaatcacttattttaaacaaataatttagtttgtttggatacaactatataaaagagatttttttttacaaaatta--gttcaatcttttaaacctta 5246594  T
Q  588 ttttctctctc 598  Q
    |||||||||||    
T  5246595 ttttctctctc 5246605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 28793877 - 28794094
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||||||||  | |||||    
T  28793877 gtttgttacggattaacataaaagtgattttgacatcaaataatttagagattatattttagaaattttatgaaaaatcaaaatctattttgtg-ttgtt 28793975  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    |||||   ||| ||||||       ||||||||||||||||||||||||||||||   |||||| | ||||||| ||||||||||||  ||| ||| |||    
T  28793976 taccgcgataaaaatcactttttttaaacaaataatttagtttgtttggatacaactatataaacgggatttttcgttacaaaatta--tttcaatcttt 28794073  T
Q  579 taaaccatattttctctctcc 599  Q
    |||||| |||||| |||||||    
T  28794074 taaaccgtattttttctctcc 28794094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 386 - 565
Target Start/End: Complemental strand, 4728068 - 4727888
Alignment:
Q  386 acggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgta 485  Q
    |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||||||| |||    
T  4728068 acggattaaaataaaagtgattttgatataaaataatttagagtttatattttagagattatatgaaaaatcagaatctattttgcgtttgtttactgta 4727969  T
Q  486 ctaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattt-tttgttacaaaatta 565  Q
     ||| ||||||       ||||||||||| ||||||||||| ||||||   |||||||| ||||| |||||||||||||||    
T  4727968 ataaaaatcaccttttttaaacaaataatctagtttgtttgaatacaactatataaaagggatttgtttgttacaaaatta 4727888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 397 - 561
Target Start/End: Original strand, 35040047 - 35040211
Alignment:
Q  397 taaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcac 496  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||||||||| ||| |||||     
T  35040047 taaaagtgattttgatataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtttaccgtaataaaaatcat 35040146  T
Q  497 nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaa 561  Q
           |||||||||||||||||||||||||| ||| | ||||||||  |||||||||||||||    
T  35040147 ttttttaaaacaaataatttagtttgtttggattcaaccatataaaaggaattttttgttacaaa 35040211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 374 - 597
Target Start/End: Original strand, 5249220 - 5249440
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgt 473  Q
    |||| ||||||||||||||||||||||| ||||||| ||||||||||||||| |||  |||||||||||| |||||| |||||||  |||||||||||||    
T  5249220 ggctcgtttgttacggattaaaataaaattgatttttacataaaataatttaaagaa-atattttagagaatttatggaaaatcataatctattttacgt 5249318  T
Q  474 ttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaa 573  Q
    |||||||||||| ||| ||||||       ||||||||||||||||| ||||| ||||||   |||||||| ||||||||||| ||||||||   || ||    
T  5249319 ttgtttaccgtagtaaaaatcactttttttaaacaaataatttagttagtttgaatacaactatataaaagggattttttgttgcaaaatta--gttcaa 5249416  T
Q  574 tattttaaaccatattttctctct 597  Q
    | ||||||| |||||||| |||||    
T  5249417 tcttttaaatcatattttttctct 5249440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 392 - 599
Target Start/End: Original strand, 19134645 - 19134852
Alignment:
Q  392 taaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaaga 491  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||| | || ||| |    
T  19134645 taaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaaatcaaaatctattttgcgtttgtttaacataataaaa 19134744  T
Q  492 atcacnnnnnnnaaa--caaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatatt 589  Q
    ||||        |||   ||||||| ||||||||||||||||||   |||||||| ||||||||||||||||||||   || ||| |||||||| |||||    
T  19134745 atcatttttttaaaaacaaaataatctagtttgtttggatacaattatataaaagggattttttgttacaaaatta--gttcaatcttttaaacaatatt 19134842  T
Q  590 ttctctctcc 599  Q
    ||||||||||    
T  19134843 ttctctctcc 19134852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 20515507 - 20515321
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||  ||||||||| ||||||||    
T  20515507 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattattttttagagattttataaaaaatcaaaatctattttgcgtttgtt 20515408  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagatttt-ttgttacaaaatta 565  Q
    || |||| ||| ||||||        || ||||||||||||||||||||| |||    |||||||| |||||| ||||||||||||||    
T  20515407 tagcgtagtaaaaatcactttttattaa-aaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaatta 20515321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 379 - 484
Target Start/End: Complemental strand, 35041738 - 35041633
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||    
T  35041738 gtttgttacggattaaaataaaagtgattttgacgtaagataatttagagattatattttagagattttatgtaaaatcagaatctattttgcgtttgtt 35041639  T
Q  479 taccgt 484  Q
    ||||||    
T  35041638 taccgt 35041633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 379 - 495
Target Start/End: Original strand, 36197553 - 36197669
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| ||| ||||    
T  36197553 gtttgttacggattaaaataaaaatgattttgacataaaataatttagagattattttttagagattttatgaaaaatcagaatcaattttgcgtctgtt 36197652  T
Q  479 taccgtactaagaatca 495  Q
    ||||||| ||| |||||    
T  36197653 taccgtaataaaaatca 36197669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 379 - 496
Target Start/End: Complemental strand, 35041519 - 35041402
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  35041519 gtttgttacaaattaaaataaaaatgattttgccataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 35041420  T
Q  479 taccgtactaagaatcac 496  Q
    ||| ||| ||| ||||||    
T  35041419 tactgtaataaaaatcac 35041402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 380 - 480
Target Start/End: Original strand, 34383255 - 34383355
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||||| ||||||||    
T  34383255 tttgttacagattaaaataaaagtgattttgacataaaataatttagagattat-ttttagagattttatgaaaaaatcagaatctattttgcgtttgtt 34383353  T
Q  479 ta 480  Q
    ||    
T  34383354 ta 34383355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 379 - 518
Target Start/End: Complemental strand, 35041373 - 35041234
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||| ||||||  |||||||||||||||||||| ||| |||||||||||||| ||||||| ||||||||| | ||||||    
T  35041373 gtttgttacggattaaaataaaagtaattttgcaataaaataatttagagattaaattctagagattttatgagaaatcagaatctattttgcatttgtt 35041274  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttag 518  Q
    ||||||  ||| ||||||       |||||||||||||||    
T  35041273 taccgtgataaaaatcactttttttaaacaaataatttag 35041234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 379 - 596
Target Start/End: Original strand, 35781257 - 35781458
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||              |||||||||||||||||||  ||||||||| ||||||||    
T  35781257 gtttgttacagattaaaataaaagtgattttgacataaaataattta--------------gagattttatgaaaaatcaaaatctattttgcgtttgtt 35781342  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||||||       ||||||| ||| ||||| ||||||||||||   ||||||| | |||||||||||||||||||   |||||| |||    
T  35781343 taccgtaataaaaatcactttttttaaacaaaaaatctagttcgtttggatacaactatataaaatatattttttgttacaaaatta--gtttaatcttt 35781440  T
Q  579 taaaccatattttctctc 596  Q
    |||| |||||||||||||    
T  35781441 taaatcatattttctctc 35781458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 35040611 - 35040406
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| ||||              |||| ||||||||| ||||||||| ||||||||    
T  35040611 gtttgttacggattaaaataaatgtgattgtgacataaaataatttagcgatt--------------ttataaaaaatcagaatctattttgcgtttgtt 35040526  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagag-attttttgttacaaaattaatttttaatatt 577  Q
    ||||||| ||| ||||||       ||||||||||||||||||||||||||||||   |||||||| | |||||||||||||||||||   || ||| ||    
T  35040525 taccgtaataaaaatcacgttttttaaacaaataatttagtttgtttggatacaactatataaaagggaattttttgttacaaaatta--gttcaatctt 35040428  T
Q  578 ttaaaccatattttctctctcc 599  Q
    ||||| ||||||||||| ||||    
T  35040427 ttaaatcatattttctccctcc 35040406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 380 - 484
Target Start/End: Complemental strand, 6538249 - 6538145
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttt 479  Q
    |||||||||||||||||||||||||  || || | ||||||||||||||||||||||||| |||||||| |||||||||| |||||||||  ||||||||    
T  6538249 tttgttacggattaaaataaaagtggcttcgatacaaaataatttagagattatattttaaagattttaagaaaaatcagaatctattttgtgtttgttt 6538150  T
Q  480 accgt 484  Q
    |||||    
T  6538149 accgt 6538145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 30054686 - 30054584
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||| || ||||||||||| | | ||||||||| |||||||||| |||||||    
T  30054686 gtttgttacggattaaaataaaagtgattttaaaataaaataatttagagataat-ttttagagattctttaaaaaatcagaatctattttatgtttgtt 30054588  T
Q  479 tacc 482  Q
    ||||    
T  30054587 tacc 30054584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 379 - 485
Target Start/End: Complemental strand, 17367713 - 17367607
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| |||| |||||||||| ||||| | |||||||||||||| |||||||||||||||||||| ||||||||||  |||||||||  |||||||    
T  17367713 gtttgttacagattgaaataaaagtaattttaatataaaataatttagtgattatattttagagattttgtgaaaaatcaaaatctattttgtgtttgtt 17367614  T
Q  479 taccgta 485  Q
    |||||||    
T  17367613 taccgta 17367607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 381 - 482
Target Start/End: Complemental strand, 6429707 - 6429606
Alignment:
Q  381 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    |||||||  |||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||| |||||||||||| |  ||||||||| ||||||||||    
T  6429707 ttgttacaaattaaaataaaaatgattttcacataaaataatttagagattattttttaaagaatttatgaaaaattataatctattttgcgtttgttta 6429608  T
Q  481 cc 482  Q
    ||    
T  6429607 cc 6429606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 436 - 599
Target Start/End: Complemental strand, 12546049 - 12545887
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    |||||||||| ||||||||||||| |||||||||  |||||||||||||| ||| |||||        ||| |||||||||||||||||||||| ||| |    
T  12546049 tttagagattgtatgaaaaatcagaatctattttgtgtttgtttaccgtaataaaaatcattttttttaaataaataatttagtttgtttggattcaacc 12545950  T
Q  536 ttataaaagaga-ttttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
     |||||||| || |||||| ||||||| |||   || |||||||||||  |||||||||||||||    
T  12545949 atataaaagcgatttttttattacaaattta--gttcaatattttaaattatattttctctctcc 12545887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 35041976 - 35041908
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 447  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || ||||||||||    
T  35041976 gtttgttacggattaaaataaaagtgattttgacataaaataatttttagattattttatagagatttt 35041908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 379 - 480
Target Start/End: Original strand, 38494368 - 38494470
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagaga-ttttatgaaaaatcaggatctattttacgtttgt 477  Q
    |||||||| |||||| |||||||||||||||||||| ||| |||||| ||||||| ||||||||| |||||| ||||||||  |||||||||  ||||||    
T  38494368 gtttgttatggattagaataaaagtgattttgacattaaaaaatttaaagattattttttagagatttttataaaaaatcaaaatctattttgtgtttgt 38494467  T
Q  478 tta 480  Q
    |||    
T  38494468 tta 38494470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 25458332 - 25458394
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttaga 441  Q
    |||||||| | |||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  25458332 gtttgttatgaattaaaataaaaataattttgacataaaataatttagagattatattttaga 25458394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 409 - 592
Target Start/End: Original strand, 1349146 - 1349326
Alignment:
Q  409 tgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaaca 508  Q
    |||| |||||||||||||||||||| |||||  ||||||  |||||||||| || ||| ||  |||||||||||||| ||| ||| ||       ||| |    
T  1349146 tgacgtaaaataatttagagattattttttaaggatttttcgaaaaatcagaatttatcttgtgtttgtttaccgtaataaaaataac-tttttaaaata 1349244  T
Q  509 aataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttc 592  Q
    ||||||||||||||||| |||| ||   ||||||||| || ||||| ||||||||||   |||||| |||| ||||||||||||    
T  1349245 aataatttagtttgtttagatataactatataaaagaaatgttttgatacaaaatta--gtttaatcttttgaaccatattttc 1349326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 18585569 - 18585621
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||| |||||    
T  18585569 gtttgttatggattaaaataaaagtgattttggcataaaataatttatagatt 18585621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 385 - 447
Target Start/End: Complemental strand, 27124312 - 27124250
Alignment:
Q  385 tacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 447  Q
    ||||||||||||||||||||||||| ||||  ||||||||||||||||  ||||||| |||||    
T  27124312 tacggattaaaataaaagtgattttaacatttaataatttagagattaatttttagatatttt 27124250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 519 - 599
Target Start/End: Original strand, 19135030 - 19135110
Alignment:
Q  519 tttgtttggatacaaacttataaaagagatttttt--gttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||||||||||||||   |||||||||||||||||  |||||||||||| ||   ||| ||||||||||||||||||||||||    
T  19135030 tttgtttggatacaactatataaaagagattttttttgttacaaaattagttc--aatcttttaaaccatattttctctctcc 19135110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 599
Target Start/End: Original strand, 34383382 - 34383471
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||||| ||||||||||||||   |||||||| ||| |||||||||||||| ||  || ||| |||||| || ||||||||||||||    
T  34383382 aaataatttagattgtttggatacaactatataaaagggatattttgttacaaaatcaa--ttcaatcttttaagccttattttctctctcc 34383471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 410 - 465
Target Start/End: Original strand, 35038923 - 35038979
Alignment:
Q  410 gacataaaataatttagagattatattttag-agattttatgaaaaatcaggatcta 465  Q
    ||||||||||||||| ||||||||||||| | ||||||||||||||||||| |||||    
T  35038923 gacataaaataatttcgagattatatttttgaagattttatgaaaaatcagaatcta 35038979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 514 - 565
Target Start/End: Original strand, 43582984 - 43583033
Alignment:
Q  514 tttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||||||||||||||||||||  |||||||| ||||||||||||||||||||    
T  43582984 tttagtttgtttggatacaaa--tataaaagggattttttgttacaaaatta 43583033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 455
Target Start/End: Original strand, 19950609 - 19950684
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaa 455  Q
    |||| ||||||||||||||||| | ||||||||||  |||  |||||||||||| ||||||| ||||||| |||||    
T  19950609 tttgctacggattaaaataaaaatcattttgacattgaatggtttagagattattttttagacattttataaaaaa 19950684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 17342370 - 17342423
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacat-aaaataatttagagatt 431  Q
    |||| |||||||||||||||||||||||||||  || |||||||||||||||||    
T  17342370 gtttattacggattaaaataaaagtgattttgctataaaaataatttagagatt 17342423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 513 - 570
Target Start/End: Original strand, 18585688 - 18585745
Alignment:
Q  513 atttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttt 570  Q
    |||||||||||||||||||||   |||||||  |||||||||||||||||||| ||||    
T  18585688 atttagtttgtttggatacaactatataaaaacgattttttgttacaaaattactttt 18585745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 565
Target Start/End: Complemental strand, 35039813 - 35039764
Alignment:
Q  516 tagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||||||||||||||   |||||||| ||||||||||||||||||||    
T  35039813 tagtttgtttggatacaactatataaaagggattttttgttacaaaatta 35039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 12546092 - 12546040
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||| ||| |||||||||||||| || |||| |||||||||||||||||||||    
T  12546092 gtttattatggattaaaataaaaatgtttttaacataaaataatttagagatt 12546040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 436 - 496
Target Start/End: Original strand, 17342414 - 17342474
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcac 496  Q
    |||||||||||||||| ||||||| || ||||||  |||||||||||||| ||| ||||||    
T  17342414 tttagagattttatgacaaatcagaatttattttgtgtttgtttaccgtaataaaaatcac 17342474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 641 - 679
Target Start/End: Complemental strand, 6429430 - 6429392
Alignment:
Q  641 tttttagattctgattttattaaaaagcagtaacaaacg 679  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  6429430 tttttagattctgatttttttaaaaagctgtaacaaacg 6429392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 641 - 679
Target Start/End: Original strand, 19135168 - 19135206
Alignment:
Q  641 tttttagattctgattttattaaaaagcagtaacaaacg 679  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  19135168 tttttagattctgatttttttaaaaagctgtaacaaacg 19135206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 599
Target Start/End: Complemental strand, 6429579 - 6429489
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagat-tttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||||||||||| ||||||||   |||||||  ||| |||||||||||||||||   || ||| |||| | |||||||||||||||||    
T  6429579 aaataatttagtttgttaggatacaactatataaaaacgatatttttgttacaaaatta--gttcaatcttttgatccatattttctctctcc 6429489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 389 - 446
Target Start/End: Complemental strand, 19170475 - 19170418
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattt 446  Q
    |||||||||||||||||||||||| |  |||||| || ||||||| ||||| ||||||    
T  19170475 gattaaaataaaagtgattttgactttgaataatatatagattattttttaaagattt 19170418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 436
Target Start/End: Original strand, 25095740 - 25095797
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatatt 436  Q
    |||||||||| |||| ||||||| |||| ||||||||||| ||| |||||||| ||||    
T  25095740 gtttgttacgaattagaataaaaatgatcttgacataaaaaaatatagagattttatt 25095797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 379 - 436
Target Start/End: Original strand, 25153710 - 25153767
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatatt 436  Q
    |||||||||| |||| ||||||| |||| ||||||||||| ||| |||||||| ||||    
T  25153710 gtttgttacgaattagaataaaaatgatcttgacataaaaaaatatagagattttatt 25153767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 515 - 599
Target Start/End: Complemental strand, 25458608 - 25458526
Alignment:
Q  515 ttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||||||| ||| ||||||   |||||||| ||||||||||||||||||||   || ||| |||| | |||||||||||||||||    
T  25458608 ttagtttgattgaatacaattatataaaagcgattttttgttacaaaatta--gttcaatcttttgatccatattttctctctcc 25458526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 640 - 699
Target Start/End: Original strand, 35781517 - 35781578
Alignment:
Q  640 gtttttagattctgattttattaaaaagcagtaacaaac-gatgcaacac-cttaaaagtga 699  Q
    ||||||||||||||| ||| ||||||||| ||||||||| ||||||| || |||||||||||    
T  35781517 gtttttagattctgagttttttaaaaagctgtaacaaacggatgcaaaactcttaaaagtga 35781578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 2e-66; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 6844336 - 6844554
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  6844336 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgtt 6844435  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||||||       ||||||||||| |||||||||||||| |||   |||||||||||||||||||||||||||||   |||||| |||    
T  6844436 taccgtaataaaaatcactttttttaaacaaataatctagtttgtttggatgcaactatataaaagagattttttgttacaaaatta--gtttaatcttt 6844533  T
Q  579 taaaccatattttctctctcc 599  Q
    ||||  |||||||||||||||    
T  6844534 taaataatattttctctctcc 6844554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 33674853 - 33675071
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||    
T  33674853 gtttgttacggattaaaataaaaatgattttgacataaaataatttagagattatattttagatattttatgaaaaatcagaatctattttgcgtttgtt 33674952  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||| ||       |||||||||||||| |||| ||||||||||   ||||||||||||||||||||||||||||||  || ||| |||    
T  33674953 taccgtaataaaaataactttttttaaacaaataatttaatttgattggatacaactatataaaagagattttttgttacaaaattaa--ttcaatcttt 33675050  T
Q  579 taaaccatattttctctctcc 599  Q
    ||||| |||||||||||||||    
T  33675051 taaacaatattttctctctcc 33675071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 43326175 - 43325957
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  43326175 gtttgtcacggattaaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaaatcagaatctatttttcgtttgtt 43326076  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||    ||| ||||||        ||||||||||||| |||||||||||||||   |||||||| ||||||||||||||||||||   |||||| |||    
T  43326075 taccacgataaaaatcactttttttcaacaaataatttaatttgtttggatacaattatataaaagggattttttgttacaaaatta--gtttaatcttt 43325978  T
Q  579 taaaccatattttctctctcc 599  Q
    |||| ||||||||||||||||    
T  43325977 taaaacatattttctctctcc 43325957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 24686063 - 24686284
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagat--tatattttagaga-ttttatgaaaaatcaggatctattttacgttt 475  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||| |||| ||||||||||| |||||||||||||||    
T  24686063 gtttgttacggattaaaataaaagtaattttgacatacaataatttagagattatatattttagagatttttgtgaaaaatcagaatctattttacgttt 24686162  T
Q  476 gtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaata 575  Q
    |||||||||| ||| ||| ||       ||||||||||| |||||||||||||||||    |||||||| ||||||||||||||||||||   || |||     
T  24686163 gtttaccgtaataaaaataactttttttaaacaaataatctagtttgtttggatacagctatataaaagcgattttttgttacaaaatta--gttcaatc 24686260  T
Q  576 ttttaaaccatattttctctctcc 599  Q
    |||||| |||||||||||||||||    
T  24686261 ttttaatccatattttctctctcc 24686284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 33240953 - 33241170
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  33240953 gtttgttatggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtt 33241052  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    || |||| ||| |||||        |||||||||||||||||||||| ||| ||| | |||||||| |||| ||||||||||| |||   || |||||||    
T  33241053 tatcgtaataaaaatca-tttttttaaacaaataatttagtttgtttagattcaaccatataaaagggattctttgttacaaattta--gttcaatattt 33241149  T
Q  579 taaaccatattttctctctcc 599  Q
    ||||  |||||||||| ||||    
T  33241150 taaattatattttctccctcc 33241170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 390 - 599
Target Start/End: Original strand, 17054112 - 17054318
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaa 489  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||||||| ||||||||| ||||||||||||||| |||    
T  17054112 attaaaataaaagtgattttgac-taaaataatttagagattatattttagagattaaatgaaaaatcagaatctattttgcgtttgtttaccgtaataa 17054210  T
Q  490 gaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatatt 589  Q
     ||||||       ||||||||||| |||||||||| |||||||   |||||||   |||||||||||||||||||   || ||| |||||||| |||||    
T  17054211 aaatcactatttttaaacaaataatctagtttgtttcgatacaactatataaaatgaattttttgttacaaaatta--gttcaatcttttaaacaatatt 17054308  T
Q  590 ttctctctcc 599  Q
    ||||||||||    
T  17054309 ttctctctcc 17054318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 11981586 - 11981771
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  11981586 gtttgttgcagattaaaataaaagtgattttgacataaaataatttagagattatattttagagactttatgaaaaatcagaatctattttccgtttgtt 11981685  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    || |||| ||| |||          ||||||||||| ||||||||||||||||||   |||||||| || |||||||||||||||||    
T  11981686 tatcgtattaaaaatatatttttttaaacaaataatctagtttgtttggatacaactatataaaaggga-tttttgttacaaaatta 11981771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 382 - 599
Target Start/End: Complemental strand, 43115173 - 43114959
Alignment:
Q  382 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttac 481  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  43115173 tgttatggattaaaataaaagtaattttgacataaaataatttaaagattattttttagagattttatgaaaaatcagaatctattttgcgtttgtttac 43115074  T
Q  482 cgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaa 581  Q
    |||| ||  ||||||        || |||||||||||||||||||||||||    |||||||  ||||||||||||||||||||   |||||| ||| ||    
T  43115073 cgtaatagaaatcacttttttttaa-aaataatttagtttgtttggatacagctatataaaatcgattttttgttacaaaatta--gtttaatctttaaa 43114977  T
Q  582 accatattttctctctcc 599  Q
     | |||||||||||||||    
T  43114976 tctatattttctctctcc 43114959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 369 - 565
Target Start/End: Complemental strand, 6614488 - 6614293
Alignment:
Q  369 ttaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattt 468  Q
    ||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  6614488 ttaaaggcccgtttgttacagattaaaataaaagtgattttgacataaaataatttaaagattatattttagaaattttatgaaaaatcagaatctattt 6614389  T
Q  469 tacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaatta 565  Q
    |||  |||||||||||| ||| ||||||       |||||||||||||||||| |||  ||||||   |||||||| || ||||||||||||||||||    
T  6614388 tacaattgtttaccgtaataa-aatcac-ctttttaaacaaataatttagtttatttaaatacaactatataaaagggatttttttgttacaaaatta 6614293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 47795651 - 47795466
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  |||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||  |||||||    
T  47795651 gtttgttacatattaaaattaaagtgattt-gacataaaataatttagagaatatattttagagattttatgaaaaatcagaatctattttgtgtttgtt 47795553  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||| ||| |||||        ||||||||||| |||||||||| ||||| |   |||||||| ||||||||||||||||||||    
T  47795552 taccgtaataaaaatcattttttttaaacaaataatctagtttgttttgatacgactatataaaagggattttttgttacaaaatta 47795466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 381 - 528
Target Start/End: Original strand, 10065983 - 10066131
Alignment:
Q  381 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  10065983 ttgttacagattaaaataaaagtgattttgacataaaataatttagaaattatattttagaaattttatgaaaaatcagaatctattttgcgtttgttta 10066082  T
Q  481 ccgtact-aagaatcacnnnnnnnaaacaaataatttagtttgtttgga 528  Q
    ||||| | || ||| ||       |||||||||||||||||||||||||    
T  10066083 ccgtagtaaaaaattactttttttaaacaaataatttagtttgtttgga 10066131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 366 - 565
Target Start/End: Original strand, 47795796 - 47795995
Alignment:
Q  366 agattaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatcta 465  Q
    ||||||| |||  ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  47795796 agattaagggcccgtttgttacggattaaaataaaagtgattttgatataaaataatttatagattatattttagagattatatgaaaaatcagaatcta 47795895  T
Q  466 ttttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||  |||||||||| ||| ||| ||||          |||||||||| |||||||||| ||||| |   ||||||||  |||||||||||||||||||    
T  47795896 ttttgtgtttgtttactgtaataaaaatcttttttttttaacaaataatctagtttgttttgatacgactatataaaaggaattttttgttacaaaatta 47795995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 392 - 596
Target Start/End: Original strand, 6318792 - 6318997
Alignment:
Q  392 taaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaaga 491  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||| ||||||| ||| |    
T  6318792 taaaatagaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtgtaccgtaataaaa 6318891  T
Q  492 atcacnnnnnnnaaacaaataa---tttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatat 588  Q
    || ||       ||||| ||||   |||| ||||||||||| |||   |||||||| ||||||||||||||||||||   || ||| |||||| ||||||    
T  6318892 attacttttttaaaacagataattttttaatttgtttggatgcaactatataaaagggattttttgttacaaaatta--gttcaatcttttaatccatat 6318989  T
Q  589 tttctctc 596  Q
    ||||||||    
T  6318990 tttctctc 6318997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 402 - 599
Target Start/End: Original strand, 48738391 - 48738586
Alignment:
Q  402 gtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnn 501  Q
    ||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||  |||||||||  ||| |||||||||| ||| ||||||         
T  48738391 gtgatttagacataaaataatttagaaattatattttaaagattttatgaaaaatcataatctattttgtgttcgtttaccgtaataaaaatcactcttt 48738490  T
Q  502 nnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
       ||||||||||||||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  48738491 ttgaacaaataatttagtttgtttagatacaactgtataaaagtgattttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 48738586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 379 - 598
Target Start/End: Original strand, 49243654 - 49243869
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||| ||||||||||||||| |||||||||   ||||||    
T  49243654 gtttgttatggattaaaataaaagtgattttgatgtaaaataatttagagattata-tttataga-tttatgaaaaatcagaatctattttgtatttgtt 49243751  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||  ||| ||| ||       ||||||||||| ||||||||||||||||||   |||||||| ||||||||||||||||||||   || ||| |||    
T  49243752 taccgtgataaaaattactttttttaaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatta--gttcaatcttt 49243849  T
Q  579 taaaccatattttctctctc 598  Q
    ||||  ||||||||||||||    
T  49243850 taaaagatattttctctctc 49243869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 33813479 - 33813376
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||||||| |||||||    
T  33813479 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 33813380  T
Q  479 tacc 482  Q
    ||||    
T  33813379 tacc 33813376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 33872949 - 33872846
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||||||| |||||||    
T  33872949 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 33872850  T
Q  479 tacc 482  Q
    ||||    
T  33872849 tacc 33872846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 47793195 - 47793298
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||||||| |||||||    
T  47793195 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 47793294  T
Q  479 tacc 482  Q
    ||||    
T  47793295 tacc 47793298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 379 - 553
Target Start/End: Complemental strand, 52404394 - 52404219
Alignment:
Q  379 gtttgttacggatt-aaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgt 477  Q
    |||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||| |||||||||||||||||    
T  52404394 gtttgttacgtatttaaaataaaaatgattttgacataaaataatttagagattatatattagagattttgtgaagaatcagaatctattttacgtttgt 52404295  T
Q  478 ttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagatttttt 553  Q
    ||| | |  ||| ||||||       ||||||||||| ||||||||| ||||||||   |||||||| ||||||||    
T  52404294 ttagcatgataaaaatcactttttttaaacaaataatctagtttgttgggatacaactatataaaagggatttttt 52404219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 379 - 533
Target Start/End: Complemental strand, 47794812 - 47794658
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| || ||||||  |||||||    
T  47794812 gtttgttacggattaaaataaaagtgattttgacataaaataaattagagattatattttaaagattttatgaaaaatcagaatttattttgtgtttgtt 47794713  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 533  Q
    |   ||  ||| | ||||        |||||||||||||||||||||||||||||    
T  47794712 tgttgtgataaaagtcacttttttttaacaaataatttagtttgtttggatacaa 47794658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 385 - 562
Target Start/End: Original strand, 42429472 - 42429651
Alignment:
Q  385 tacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgt 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||| || |||||| ||||||||||  ||    
T  42429472 tacggattaaaataaaagtgattttgacataaaataatttagagattattttttatagattatataaaaaatcagaatttattttgcgtttgtttattgt 42429571  T
Q  485 actaagaatcac-nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaa 562  Q
    | ||| ||||||        ||| |||||||||||||||||||||||||    |||||||| || |||||||||||||||    
T  42429572 agtaaaaatcactttttattaaataaataatttagtttgtttggatacatctatataaaagggatttttttgttacaaaa 42429651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 379 - 598
Target Start/End: Original strand, 45807860 - 45808072
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||       || || ||| ||||||||    
T  45807860 gtttgttatggattaaaataaaagtaattttgatataaaataatttagagattatattttagagattttatgaaa------tatttactttgcgtttgtt 45807953  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatatt 577  Q
    ||||||| ||| |||||        ||||||||||| |||||||||||||||||    ||||||||||| |||||| |||||||||||   || ||  ||    
T  45807954 taccgtaataaaaatcattttttttaaacaaataatctagtttgtttggatacacctatataaaagagatttttttattacaaaatta--gttcaacctt 45808051  T
Q  578 ttaaaccatattttctctctc 598  Q
    |||||| ||||||||||||||    
T  45808052 ttaaacaatattttctctctc 45808072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 379 - 496
Target Start/End: Original strand, 39842667 - 39842783
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||| || |||||||||  |||||||    
T  39842667 gtttgttacg-attaaaataaaaatgattttgacataaaataatttagagattctattttagagattttataaaaaataagaatctattttgtgtttgtt 39842765  T
Q  479 taccgtactaagaatcac 496  Q
    ||| ||| ||| ||||||    
T  39842766 tacagtaataaaaatcac 39842783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 383 - 565
Target Start/End: Complemental strand, 46675909 - 46675732
Alignment:
Q  383 gttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttacc 482  Q
    |||| |||||||||| |||||||||||||| ||||||||| || ||||||| ||||||||||||||||||||||||| |||||||||  |||| ||||||    
T  46675909 gttaaggattaaaattaaagtgattttgacgtaaaataatatatagattattttttagagattttatgaaaaatcagaatctattttgtgtttatttacc 46675810  T
Q  483 gtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
     || ||| |||||            ||||||||||||||||| |||||||    | |||||||||||||||||||||||||||    
T  46675809 ttaataaaaatcattttttt-----aaataatttagtttgttaggatacacctatgtaaaagagattttttgttacaaaatta 46675732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 379 - 448
Target Start/End: Complemental strand, 10338376 - 10338307
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttta 448  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10338376 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttta 10338307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 375 - 482
Target Start/End: Original strand, 47882181 - 47882289
Alignment:
Q  375 gctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatatttt-agagattttatgaaaaatcaggatctattttacgt 473  Q
    |||||||||||| | ||||||  |||||||| |||||| |||||||||||||||||| | |||| |||||||||||||||||| || |||||||||||||    
T  47882181 gctggtttgttatgaattaaatcaaaagtgactttgacgtaaaataatttagagattgtttttttagagattttatgaaaaattagaatctattttacgt 47882280  T
Q  474 ttgtttacc 482  Q
    |||||||||    
T  47882281 ttgtttacc 47882289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 427 - 599
Target Start/End: Complemental strand, 47795226 - 47795057
Alignment:
Q  427 agattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttg 526  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||| || |||||||||||| ||| ||| |        |||||||||||||| ||| ||||    
T  47795226 agattatatttgagagattttataaaaaatcagaatctattttgcgcttgtttaccgtaataaaaatta-tttgtttaaacaaataatttattttttttg 47795128  T
Q  527 gatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||  |||||||  ||||||||||||||||||||   || ||  ||||||| ||||||||||||||||    
T  47795127 gatacaaatatataaaatggattttttgttacaaaatta--gttcaaacttttaaatcatattttctctctcc 47795057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 42834817 - 42834765
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42834817 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 42834765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 382 - 561
Target Start/End: Complemental strand, 6941809 - 6941636
Alignment:
Q  382 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttac 481  Q
    ||||||||||||||||||||||||||||      ||||  |||| ||||||||||||||||||||||||||||||||| ||| |||||  |||| |||||    
T  6941809 tgttacggattaaaataaaagtgatttt------aaat--tttaaagattatattttagagattttatgaaaaatcagaatcaattttctgtttatttac 6941718  T
Q  482 cgtactaagaatc-acnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaa 561  Q
    |||| ||| |||| |        ||||||||||| ||||||||||||||||||   || ||||||||  |||||||||||||    
T  6941717 cgtaataaaaatcaattttttttaaacaaataatctagtttgtttggatacaactatacaaaagagagctttttgttacaaa 6941636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 43114633 - 43114685
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  43114633 gtttgatacggattaaaataaaagtgattttgacataaaataatttagagatt 43114685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 380 - 432
Target Start/End: Original strand, 47795749 - 47795801
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagatta 432  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47795749 tttgttacggattaaaataaaagtgattttaacataaaataatttagagatta 47795801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 379 - 433
Target Start/End: Complemental strand, 47795712 - 47795658
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 433  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  47795712 gtttgttacggattaaaataaaaatgattttcacataaaataatttagagattat 47795658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 434 - 598
Target Start/End: Original strand, 47796215 - 47796378
Alignment:
Q  434 attttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatca-cnnnnnnnaaacaaataatttagtttgtttggataca 532  Q
    |||||||||||||||||||||||||| || |||||| |||||| |||||||| ||| |||||         ||||||||||| | |||||||| ||||||    
T  47796215 attttagagattttatgaaaaatcagaatatattttgcgtttgcttaccgtaataaaaatcattttttttaaaacaaataatctcgtttgtttagataca 47796314  T
Q  533 aacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 598  Q
    |   ||||||||| ||||||| ||||||||||| || |  || |||||||  ||||||||||||||    
T  47796315 actatataaaagaaattttttattacaaaattagttct--atcttttaaagaatattttctctctc 47796378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 379 - 427
Target Start/End: Original strand, 6941241 - 6941289
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttaga 427  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6941241 gtttgttacggattaaaataaaagtgattttgacgtaaaataatttaga 6941289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 49480444 - 49480392
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  49480444 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagatt 49480392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 599
Target Start/End: Original strand, 42834839 - 42834998
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    |||||||||| ||||||||||||   | ||||||  ||||||||| | || ||| ||||||       ||||||||||||||||||||||||||   |||    
T  42834839 tttagagattgtatgaaaaatcaaattatattttgtgtttgtttatcataataaaaatcacttttttaaaacaaataatttagtttgtttggat---aac 42834935  T
Q  536 t-tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    | |||||||| ||||||||||||||||||||   || ||| |||||| | |||||||||||||||    
T  42834936 tatataaaagggattttttgttacaaaatta--gttcaatcttttaatctatattttctctctcc 42834998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 6319238 - 6319170
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 447  Q
    |||||||| |||||||||||||| | |||||||||  |||||||||||||||||| || ||||||||||    
T  6319238 gtttgttatggattaaaataaaaataattttgacacgaaataatttagagattattttctagagatttt 6319170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 11335868 - 11335820
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttaga 427  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  11335868 gtttgttacgtattaaaataaaagtgattttgatataaaataatttaga 11335820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 427
Target Start/End: Complemental strand, 11493887 - 11493839
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttaga 427  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||    
T  11493887 gtttgttacgtattaaaataaaagtgattttgatataaaataatttaga 11493839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 381 - 599
Target Start/End: Complemental strand, 45296973 - 45296770
Alignment:
Q  381 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    ||||||| |||||||||||||||||||| || |||||||||||||||              |||||||||||||| ||| || ||||||  |||||||||    
T  45296973 ttgttacagattaaaataaaagtgatttcgatataaaataatttaga--------------gattttatgaaaaaccagaatgtattttgtgtttgttta 45296888  T
Q  481 ccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaactta-taaaagagattttttgttacaaaattaatttttaatatttt 579  Q
    || ||  || |||||        ||||||||| ||||||||||||| ||||||  |||  |||||||||||||| |||||||||||   || ||| ||||    
T  45296887 ccataacaaaaatcattttttttaaacaaatagtttagtttgtttgaatacaactttacaaaaagagattttttattacaaaatta--gttcaatctttt 45296790  T
Q  580 aaaccatattttctctctcc 599  Q
    |||| |||||||||||||||    
T  45296789 aaactatattttctctctcc 45296770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 47796695 - 47796643
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||||||||||    
T  47796695 gtttgttacgaattaaaataaaagttatttttacataaaataatttagagatt 47796643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 384 - 431
Target Start/End: Original strand, 26271825 - 26271872
Alignment:
Q  384 ttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||    
T  26271825 ttacggattaaaataaaagcaattttgacataaaataatttagagatt 26271872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 475
Target Start/End: Original strand, 35187751 - 35187837
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgttt 475  Q
    |||||||||| |||||||||| |||| |||||||||||||||  | ||||| ||||||||| |||||| || |||| |||| |||||    
T  35187751 gattaaaatataagtgattttaacattaaataatttagagatatttttttatagattttataaaaaattagaatcttttttgcgttt 35187837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 431
Target Start/End: Complemental strand, 7562060 - 7562023
Alignment:
Q  394 aaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7562060 aaataaaagtgattttgacataaaataatttagagatt 7562023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 381 - 446
Target Start/End: Original strand, 8298421 - 8298486
Alignment:
Q  381 ttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattt 446  Q
    |||||||| ||||||||| ||||||||||||| |  ||||||||||||||||| || |||||||||    
T  8298421 ttgttacgaattaaaatataagtgattttgaccttcaataatttagagattattttatagagattt 8298486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 390 - 565
Target Start/End: Complemental strand, 8795583 - 8795409
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaaatcaggatctattttacgtttgtttaccgtacta 488  Q
    |||||| ||||||||||||||| ||  |||||||||||   ||| |||||||||||||||  |||||| || || |||||| |||||||||| || | ||    
T  8795583 attaaattaaaagtgattttgatattgaataatttaga---tattttttagagattttataaaaaaattagaatatattttgcgtttgtttatcgcaata 8795487  T
Q  489 agaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac--ttataaaagagattttttgttacaaaatta 565  Q
    | |||||         || ||||||||||||||||||||||| || |  | || |||||||||||||||||||||||||    
T  8795486 aaaatcatttttttttaataaataatttagtttgtttggata-aatctataattaaagagattttttgttacaaaatta 8795409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 437 - 496
Target Start/End: Complemental strand, 11982152 - 11982093
Alignment:
Q  437 ttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcac 496  Q
    ||||||||||||||||||||||| |||||||||| |||||||| || || ||| ||||||    
T  11982152 ttagagattttatgaaaaatcagaatctattttatgtttgttttccctaataaaaatcac 11982093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 439
Target Start/End: Original strand, 29300848 - 29300882
Alignment:
Q  405 attttgacataaaataatttagagattatatttta 439  Q
    |||||||||||||||||||||||||||||||||||    
T  29300848 attttgacataaaataatttagagattatatttta 29300882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 7562032 - 7561987
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttac 481  Q
    |||||||||||||||||||||||  |||||||||| ||||||||||    
T  7562032 tttagagattttatgaaaaatcataatctattttatgtttgtttac 7561987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 481
Target Start/End: Complemental strand, 24705392 - 24705347
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttac 481  Q
    |||||||||||||||||||||||| |||||||||  ||||||||||    
T  24705392 tttagagattttatgaaaaatcagaatctattttgtgtttgtttac 24705347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 591
Target Start/End: Original strand, 26271931 - 26272017
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatattttaaaccatatttt 591  Q
    ||||||||||||||||||||||  ||||||   ||||||||||| |||||| |||||||||||   || ||| ||||||||||||||||    
T  26271931 aaacaaataatttagtttgtttcaatacaactatataaaagagatttttttattacaaaatta--gttcaatcttttaaaccatatttt 26272017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 436 - 496
Target Start/End: Complemental strand, 47796652 - 47796592
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcac 496  Q
    |||||||||||||| |||| |||| ||||||||| ||||||||||||| | ||| ||||||    
T  47796652 tttagagattttataaaaagtcagaatctattttgcgtttgtttaccgcaataaaaatcac 47796592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 47796769 - 47796702
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 447  Q
    ||||||||| ||||||||||||||||| |||||| |  ||| ||||||| ||||| |||||||||||||    
T  47796769 gtttgttacagattaaaataaaagtgactttgaccttgaatgatttagatattat-ttttagagatttt 47796702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 9626180 - 9626239
Alignment:
Q  507 caaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaa 566  Q
    |||||||||| ||||||||||| ||||   ||||||||||||||| |||||| |||||||    
T  9626180 caaataatttcgtttgtttggaaacaactatataaaagagattttatgttacgaaattaa 9626239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 410
Target Start/End: Original strand, 12016775 - 12016806
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttg 410  Q
    ||||||||||||||||||||||||||||||||    
T  12016775 gtttgttacggattaaaataaaagtgattttg 12016806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 469
Target Start/End: Original strand, 45378251 - 45378298
Alignment:
Q  422 tttagagattatattttagagattttatgaaaaatcaggatctatttt 469  Q
    |||| ||||||||||||||||||||||| ||||||||| || ||||||    
T  45378251 tttaaagattatattttagagattttataaaaaatcagaatttatttt 45378298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 389 - 480
Target Start/End: Original strand, 214457 - 214550
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaa--tcaggatctattttacgtttgttta 480  Q
    |||| ||||||||||  |||||||||  ||||||||  ||| ||| ||||| ||||||||| |||||  |||  ||||||||||||||||||||    
T  214457 gattcaaataaaagtagttttgacattgaataattttaagaatattttttaaagattttataaaaaaaatcacaatctattttacgtttgttta 214550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 504 - 565
Target Start/End: Complemental strand, 6318756 - 6318694
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttat-aaaagagattttttgttacaaaatta 565  Q
    |||||||||||||||||||||| ||||||| | ||| |||||| ||||| |||||| ||||||    
T  6318756 aaacaaataatttagtttgttttgatacaaccgtataaaaagaaattttatgttacgaaatta 6318694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 508 - 565
Target Start/End: Original strand, 43114747 - 43114805
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaatta 565  Q
    ||||||||||||||||||||||| ||   ||||||||||| ||||||||| ||||||||    
T  43114747 aaataatttagtttgtttggatataactatataaaagagatttttttgttgcaaaatta 43114805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 484
Target Start/End: Original strand, 6941291 - 6941332
Alignment:
Q  443 attttatgaaaaatcaggatctattttacgtttgtttaccgt 484  Q
    ||||||||||||||||| |||||||||  |||||||||||||    
T  6941291 attttatgaaaaatcagaatctattttgtgtttgtttaccgt 6941332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 678
Target Start/End: Original strand, 42429756 - 42429793
Alignment:
Q  641 tttttagattctgattttattaaaaagcagtaacaaac 678  Q
    |||||||||||||||||| ||||||||| |||||||||    
T  42429756 tttttagattctgatttttttaaaaagctgtaacaaac 42429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 537 - 593
Target Start/End: Complemental strand, 47794871 - 47794817
Alignment:
Q  537 tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttct 593  Q
    |||||||| ||||||||||||||||||||   || ||| ||||||||||||||||||    
T  47794871 tataaaagggattttttgttacaaaatta--gttcaatcttttaaaccatattttct 47794817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 565
Target Start/End: Complemental strand, 49480334 - 49480273
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||||||| |||||||||| |||||||   | ||||||  |||||||||||||||||||    
T  49480334 aaacaaataatctagtttgttttgatacaactatgtaaaaggaattttttgttacaaaatta 49480273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 59)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 54175710 - 54175927
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||| ||||| ||    
T  54175710 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattataatttacagattttatgaaaaatcagaatctattttgcgtttttt 54175809  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||||||| ||||||       ||| ||||||| ||||||||||||||||||   |||||||| ||||||||||||||||||||   || ||| |||    
T  54175810 taccgtactaaaaatcac-tttttaaaataaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatta--gttcaatcttt 54175906  T
Q  579 taaaccatattttctctctcc 599  Q
    |||||||||||||||||||||    
T  54175907 taaaccatattttctctctcc 54175927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 7239109 - 7238891
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||    
T  7239109 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttgcatttgtt 7239010  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| |||||        ||||||||||| ||||||||||||||||||   |||||||| || |||||||||||||||||   || ||| |||    
T  7239009 taccgtaataaaaatcattttttttaaacaaataatctagtttgtttggatacaactatataaaagggaatttttgttacaaaatta--gttcaatcttt 7238912  T
Q  579 taaaccatattttctctctcc 599  Q
    ||||| |||||||||||||||    
T  7238911 taaacaatattttctctctcc 7238891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 9518898 - 9519112
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  9518898 gtttgttacggattaaaataaaagtgatttagacataaaataatttagagattatattttagagattttgtgaaaaatcagaatctattttgcgtttgtt 9518997  T
Q  479 taccgt-actaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatt 577  Q
    |||||| |  || || |||       |||||||||||||||||||||||||||| ||||    |||||||||||||||||||||||||   || ||| ||    
T  9518998 taccgtgataaaaaaacactttttttaaacaaataatttagtttgtttggatac-aact----aaagagattttttgttacaaaatta--gttcaatctt 9519090  T
Q  578 ttaaaccatattttctctctcc 599  Q
    ||||| ||||||||| ||||||    
T  9519091 ttaaatcatattttccctctcc 9519112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 19298736 - 19298516
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  19298736 gtttgttacggattaaaataaaagtgatttttgcataaaagaatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 19298637  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga--ttttttgttacaaaattaatttttaatat 576  Q
    ||||    ||| ||||||       ||||||||||||||||||||||| ||||||   |||||||| ||  ||||||||||||||||||   || ||| |    
T  19298636 taccacgataaaaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaagggattttttttgttacaaaatta--gttcaatct 19298539  T
Q  577 tttaaaccatattttctctctcc 599  Q
    |||||| ||||||||||||||||    
T  19298538 tttaaatcatattttctctctcc 19298516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 2494297 - 2494078
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||  ||| |||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  2494297 gtttgttacgggttaaaataaaattgattttgacataaaataat--agatattatattttagagattttatgaaaaataagaatctattttgcgtttgtt 2494200  T
Q  479 taccgtactaagaatcac---nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaata 575  Q
    ||||||| ||| ||||||           |||||||||  ||||||||||||||||||   ||||||||||||||||||||||||||||||  || ||||    
T  2494199 taccgtagtaaaaatcactttttttttttaacaaataacctagtttgtttggatacaactatataaaagagattttttgttacaaaattaa--ttcaata 2494102  T
Q  576 ttttaaaccatattttctctctcc 599  Q
    ||||||| ||||||||||||||||    
T  2494101 ttttaaatcatattttctctctcc 2494078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 27839182 - 27838995
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||| ||||||||    
T  27839182 gtttgttacagattaaaataaaagagattttgacataaaataatttagagattgtattttagagattttatgaaaaatcagaatttattttgcgtttgtt 27839083  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaatta 565  Q
    ||||||| ||| ||||||       ||||||||||| ||||||||||||||||||   || ||||| || ||||||||||||||||||    
T  27839082 taccgtaataaaaatcactttttttaaacaaataatctagtttgtttggatacaactatacaaaagggatttttttgttacaaaatta 27838995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 41692308 - 41692526
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||| |  || |||||| ||||| ||    
T  41692308 gtttgttacagattaaaataaaagtgattttgacataaaatactttaaagattatattttagtaattttatgaaaaattaaaatttattttgcgtttttt 41692407  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| |||||        |||| |||||||||||||||||||||||||   |||||||  |||||||||||||||||||||  || ||| |||    
T  41692408 taccgtaataaaaatcattttttttaaactaataatttagtttgtttggatacaattatataaaaaggattttttgttacaaaattaa--ttcaatcttt 41692505  T
Q  579 taaaccatattttctctctcc 599  Q
    |||| ||||||||||||||||    
T  41692506 taaatcatattttctctctcc 41692526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 43495700 - 43495925
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||  |||||||| ||||||||    
T  43495700 gtttgttaaggattaaaataaaagtgattttcacataaaataatttagatattatattttagagattgtatgaaaaatcagattctattttgcgtttgtt 43495799  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-------ttttttgttacaaaattaattttt 571  Q
    ||||  | ||| ||||||       |||||||||||||| |||||||| ||||||   |||||||| ||       |||||| |||||||||||   |||    
T  43495800 taccacaataaaaatcactttttttaaacaaataatttaatttgtttgtatacaactatataaaagggatgagattttttttattacaaaatta--gttt 43495897  T
Q  572 aatattttaaaccatattttctctctcc 599  Q
    ||| ||||||| ||||||||||||||||    
T  43495898 aatcttttaaaacatattttctctctcc 43495925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 49897570 - 49897354
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||| |||| |||||| |||||||  |||||||||||||||||| |||||||||||||||||||| || ||||||   ||||||    
T  49897570 gtttgttacggattaaaatagaagttattttgccataaaa--atttagagattatattttcgagattttatgaaaaatcagaatttattttgtatttgtt 49897473  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||||||       ||| ||||||| ||||||||||||||||||   |||||||| |||| |||||||||||||||   || ||| |||    
T  49897472 taccgtaataaaaatcactttttaaaaataaataatctagtttgtttggatacaactatataaaagggattatttgttacaaaatta--gttcaatcttt 49897375  T
Q  579 taaaccatattttctctctcc 599  Q
    ||||| |||||||||| ||||    
T  49897374 taaacaatattttctccctcc 49897354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 660043 - 660260
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| | |||||||||||||||||||||||||||| || ||||||||| ||||||||    
T  660043 gtttgttacggattaaaataaaagtgattttcacgtaaaataatttaaaaattatattttagagattttatgaaaaattagaatctattttgcgtttgtt 660142  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    |||  || ||| |||||        ||||||||||| ||||||||||| ||||||    ||||||| |||||| | |||||||||||   |||||| |||    
T  660143 tacgttaataaaaatcattttttttaaacaaataatctagtttgtttgaatacaactacataaaagggattttat-ttacaaaatta--gtttaatcttt 660239  T
Q  579 taaaccatattttctctctcc 599  Q
    ||||  |||||||||||||||    
T  660240 taaaaaatattttctctctcc 660260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 12928425 - 12928611
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| || ||||||||| || ||||||  |||||||    
T  12928425 gtttgttacggattaaaataaaagtgattttgacgtaaaataatttagagattattttgtagagatttaataaaaaatcagaatttattttgtgtttgtt 12928524  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    || |||| ||| ||| ||       ||| |||||||||||||||||||||||||    || ||||  ||||||||||||||||||||    
T  12928525 tatcgtagtaaaaattactttttttaaataaataatttagtttgtttggatacatctataaaaaaatgattttttgttacaaaatta 12928611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 366 - 496
Target Start/End: Complemental strand, 54807079 - 54806949
Alignment:
Q  366 agattaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatcta 465  Q
    |||||||  ||| |||||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  54807079 agattaagagctcgtttgttacaaattaaaataaaagtgattttgacataaaataagttagagattatattttagagattttgtgaaaaatcagaatcta 54806980  T
Q  466 ttttacgtttgtttaccgtactaagaatcac 496  Q
    ||||   ||||||||||||| ||| ||||||    
T  54806979 ttttgtatttgtttaccgtaataaaaatcac 54806949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 379 - 484
Target Start/End: Original strand, 32500136 - 32500241
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||| |||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  32500136 gtttattacagattaaaataaaagtgattttaatataaaataatttagagattattttttagagattttatgaaaaatcataatctattttacgtttgtt 32500235  T
Q  479 taccgt 484  Q
    ||||||    
T  32500236 taccgt 32500241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 379 - 480
Target Start/End: Complemental strand, 39136251 - 39136150
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||||||    
T  39136251 gtttgttacgaattaaaataaaagtgattttgagataaaataatttagagattatattttagagattttttaaaaaatcagaatctattttgcgtttgtt 39136152  T
Q  479 ta 480  Q
    ||    
T  39136151 ta 39136150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 379 - 484
Target Start/End: Complemental strand, 5029193 - 5029088
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||| |||||     
T  5029193 gtttgttaaagattaaaataaaagtgattttgacgtaaaataatttagagattatattttagagattttttgaaaaatcaaaatctattttacatttgta 5029094  T
Q  479 taccgt 484  Q
    ||||||    
T  5029093 taccgt 5029088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 36889891 - 36889705
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  ||||||||||||| |||||||| || |||| ||||||||||||| ||||| | ||||||||||||||||  ||||||| |  |||||||    
T  36889891 gtttgttacaaattaaaataaaagcgattttgatattaaattatttagagattattttttaaaaattttatgaaaaatcataatctattgtgtgtttgtt 36889792  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||| ||| ||||||        || ||||||||||||||||||||||||||   |||||||  ||||||||||||||||||||    
T  36889791 taccgtaataaaaatcactattttttaaaaaataatttagtttgtttggatacaacggtataaaaatgattttttgttacaaaatta 36889705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 379 - 479
Target Start/End: Complemental strand, 36638793 - 36638694
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||    
T  36638793 gtttgttacagattaaaataaaaatgattttcacataaaataatttagagattatattttagagattttatgaaatatca-gatctaatttacgtttgtt 36638695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 379 - 484
Target Start/End: Original strand, 49866980 - 49867085
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||| |||| || |||||| ||||||||    
T  49866980 gtttgtcacggattagaataaaagtgattttgacataaaataatttagatattacattttagagattttataaaaagtcagaatttattttgcgtttgtt 49867079  T
Q  479 taccgt 484  Q
    ||||||    
T  49867080 taccgt 49867085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 390 - 482
Target Start/End: Complemental strand, 45032412 - 45032320
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttacc 482  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||||||| |||||||||||    
T  45032412 attaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtttacc 45032320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 379 - 458
Target Start/End: Original strand, 16877054 - 16877133
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatca 458  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  16877054 gtttgttacggattaaaataaaagtgattataacataaaataatttagagattattttttagagattttatgaaaaatca 16877133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 379 - 475
Target Start/End: Complemental strand, 7070697 - 7070601
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgttt 475  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||| |||||||||||||||| |  ||||||||| |||||    
T  7070697 gtttgttacggattaaaataaaagtgattttgacataaaataatttaaagattcttttttaaagattttatgaaaaattaaaatctattttgcgttt 7070601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 385 - 485
Target Start/End: Original strand, 39476299 - 39476397
Alignment:
Q  385 tacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgt 484  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| |||||| |||||||    
T  39476299 tacggattaaaataa--gtgattttgacattgaataatttagagattattttttagagattttataaaaaatcagaatctattttgcgtttgcttaccgt 39476396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 380 - 481
Target Start/End: Original strand, 53140136 - 53140236
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttt 479  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| || |||||||||||||||  ||||| ||||||  ||||||||    
T  53140136 tttgttacggattaaaataaaactgattttgacataaaataattt-gagattatattataaagattttatgaaaaaataggatatattttgtgtttgttt 53140234  T
Q  480 ac 481  Q
    ||    
T  53140235 ac 53140236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 44886061 - 44886265
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||| ||||||||||||| ||||| ||||||||||||||||| |||||||              |||||||||| || |||||| ||||||||    
T  44886061 gtttgttacggcttaaaataaaagtaattttaacataaaataatttagaaattatat--------------gaaaaatcagaatttattttgcgtttgtt 44886146  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatatt 577  Q
    ||||||  ||| ||| ||       |||||||||||||||||| |||||||||||   |||||||| || ||||||||||||||||||   || ||| ||    
T  44886147 taccgtgataaaaattactttttt-aaacaaataatttagtttttttggatacaactatataaaagggatttttttgttacaaaatta--gttcaatctt 44886243  T
Q  578 ttaaaccatattttctctctcc 599  Q
    ||||| ||||||||||||||||    
T  44886244 ttaaatcatattttctctctcc 44886265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 660466 - 660518
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  660466 gtttgttacggatttaaataaaagtgattttgacataaaataatttagagatt 660518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 13222071 - 13222123
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13222071 gtttgttacggattaaaataaaagtgattttgatataaaataatttagagatt 13222123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 24739271 - 24739219
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  24739271 gtttgttacggattaaaataaaagtgattttgatataaaataatttagagatt 24739219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 29100711 - 29100767
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 435  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  29100711 gtttgttacggattaaaataaaagtgattttgatataaaataatttaaagattatat 29100767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 379 - 447
Target Start/End: Complemental strand, 42746968 - 42746904
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 447  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||    
T  42746968 gtttgttacggattaaaataaaagtgattttgacat----taatttagagattattttttagagatttt 42746904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 380 - 431
Target Start/End: Complemental strand, 42816179 - 42816128
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42816179 tttgttacggattaaaataaaagtgattttgacgtaaaataatttagagatt 42816128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 508 - 565
Target Start/End: Complemental strand, 53130944 - 53130887
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  53130944 aaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaatta 53130887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 16435943 - 16435995
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  16435943 gtttgttacggactaaaataaaagtgattttgaaataaaataatttagagatt 16435995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 41103892 - 41103940
Alignment:
Q  383 gttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41103892 gttacggattaaaataaaagtgattttcacataaaataatttagagatt 41103940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 396 - 533
Target Start/End: Complemental strand, 42314626 - 42314487
Alignment:
Q  396 ataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaa--tcaggatctattttacgtttgtttaccgtactaagaat 493  Q
    ||||||||||||||||||| |||||||||||| ||||| || |||||||| ||  |||||  |||  |||||||||  ||||||||||| |  ||| |||    
T  42314626 ataaaagtgattttgacattaaataatttagaaattattttgtagagattctaaaaaaaaattcataatctattttgtgtttgtttaccttgataaaaat 42314527  T
Q  494 cacnnnnnnnaaacaaataatttagtttgtttggatacaa 533  Q
    |||       ||| ||||||||||||||||||||||||||    
T  42314526 cacttattttaaaaaaataatttagtttgtttggatacaa 42314487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 388 - 565
Target Start/End: Original strand, 50715573 - 50715737
Alignment:
Q  388 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtact 487  Q
    |||||||||||||||||||||| |||||||||||              |||||||||||| ||||||||||| ||||||||| |||||| ||||| ||      
T  50715573 ggattaaaataaaagtgattttcacataaaataa--------------tttagagattttgtgaaaaatcagaatctattttgcgtttgcttaccataag 50715658  T
Q  488 aagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaatta 565  Q
    || ||||||       |||||||||||||| ||||||||||||||    |||||||| || ||||||||||||||||||    
T  50715659 aaaaatcactttttctaaacaaataatttaatttgtttggatacacctatataaaagggatttttttgttacaaaatta 50715737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 469
Target Start/End: Complemental strand, 40796305 - 40796224
Alignment:
Q  388 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctatttt 469  Q
    |||||||||||||||| |||||||||  ||||| |||| ||| ||| || |||||||||||||||||||||| || ||||||    
T  40796305 ggattaaaataaaagtaattttgacaacaaatattttaaagactattttatagagattttatgaaaaatcagaatttatttt 40796224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 436 - 595
Target Start/End: Original strand, 41103931 - 41104087
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    |||||||||||||||||||||||  |||||||||  |||||||||| |||  || ||||||       |||||||||||  ||||| ||| |||||||      
T  41103931 tttagagattttatgaaaaatcaaaatctattttgtgtttgtttacggtaacaaaaatcactttttttaaacaaataatccagtttatttcgatacaact 41104030  T
Q  536 ttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 595  Q
     |||||||| || |||||||||||||||||   || ||| ||||||| ||||||||||||    
T  41104031 atataaaag-gactttttgttacaaaatta--gttcaatcttttaaatcatattttctct 41104087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 409 - 447
Target Start/End: Complemental strand, 31837805 - 31837767
Alignment:
Q  409 tgacataaaataatttagagattatattttagagatttt 447  Q
    |||||||||||||||||||||||||||||||||||||||    
T  31837805 tgacataaaataatttagagattatattttagagatttt 31837767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 378 - 435
Target Start/End: Original strand, 46255090 - 46255145
Alignment:
Q  378 ggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 435  Q
    ||||| |||||||||||||||||||| |||||  ||||||||||||||||||||||||    
T  46255090 ggttttttacggattaaaataaaagtaatttt--cataaaataatttagagattatat 46255145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 42881922 - 42881979
Alignment:
Q  379 gtttgttacggattaaaataaaagtga-ttttgacataaaataatttagagattatat 435  Q
    |||||||| |||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  42881922 gtttgttatggattaaaataaaagtgatttttttcataaaataatttagagattatat 42881979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 422 - 482
Target Start/End: Complemental strand, 37243624 - 37243565
Alignment:
Q  422 tttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttacc 482  Q
    |||||||||||| ||||||||||||||| ||||||||| ||||||||| ||||| ||||||    
T  37243624 tttagagattat-ttttagagattttataaaaaatcagaatctattttgcgtttatttacc 37243565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 382 - 441
Target Start/End: Complemental strand, 2494785 - 2494726
Alignment:
Q  382 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttaga 441  Q
    |||||| ||||||||||||||| ||||||| || |||||||||||  |||||||||||||    
T  2494785 tgttactgattaaaataaaagtaattttgatattaaataatttaggcattatattttaga 2494726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 379 - 432
Target Start/End: Complemental strand, 27271726 - 27271672
Alignment:
Q  379 gtttgttacggattaaaataaaag-tgattttgacataaaataatttagagatta 432  Q
    |||||||||||||||||||||||  ||||||| ||| ||||||||||||||||||    
T  27271726 gtttgttacggattaaaataaaaaatgatttttacaaaaaataatttagagatta 27271672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 385 - 469
Target Start/End: Complemental strand, 53131054 - 53130968
Alignment:
Q  385 tacggattaaaataaaagtgattttgacataaaataatttagagatta-tattttagagattttat-gaaaaatcaggatctatttt 469  Q
    ||||||||||||||||| |||||||||| |  |||| ||||||||| | | |||||||||||||||  ||||||||| |||||||||    
T  53131054 tacggattaaaataaaattgattttgactttgaatattttagagatgatttttttagagattttataaaaaaatcagaatctatttt 53130968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 516 - 565
Target Start/End: Complemental strand, 4780735 - 4780686
Alignment:
Q  516 tagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||||||||||||||   ||||||||||||||||| |||||||||||    
T  4780735 tagtttgtttggatacaactatataaaagagattttttattacaaaatta 4780686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 11125146 - 11125187
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  11125146 attaaaataaaagtaattttgacattaaataatttagagatt 11125187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 17554964 - 17554896
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat 449  Q
    ||||||||  |||||||||||||||||||||| ||  ||||||||| ||||||| ||||| |||||||||    
T  17554964 tttgttacatattaaaataaaagtgattttgatattgaataatttaaagattat-ttttaaagattttat 17554896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 24739214 - 24739112
Alignment:
Q  451 aaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnn-aaacaaataatttagtttgtttggatacaaacttataaaagagatt 549  Q
    ||||||||| ||| ||||| |||||||||||| || ||| ||||||        ||||||||||||||||||||||||||||||   |||||||| ||||    
T  24739214 aaaaatcagaatccattttgcgtttgtttaccataataaaaatcacttttttataaacaaataatttagtttgtttggatacaattatataaaagggatt 24739115  T
Q  550 ttt 552  Q
    |||    
T  24739114 ttt 24739112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 533
Target Start/End: Original strand, 29100765 - 29100851
Alignment:
Q  447 tatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 533  Q
    ||||||||||||| |||  |||| ||||||||||| ||| ||| | ||||       ||||||||||||||||||||||||||||||    
T  29100765 tatgaaaaatcagaatcatttttgcgtttgtttactgtaataaaactcacttttttaaaacaaataatttagtttgtttggatacaa 29100851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 455
Target Start/End: Complemental strand, 37813244 - 37813188
Alignment:
Q  398 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaa 455  Q
    |||| ||||||||||||  ||||||||||||||||| ||||||| |||||||||||||    
T  37813244 aaaaatgattttgacattcaataatttagagattat-ttttagatattttatgaaaaa 37813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 436 - 496
Target Start/End: Original strand, 46255132 - 46255192
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcac 496  Q
    |||||||||| ||||||||||||| |||||||||  |||||||||| ||| ||| ||||||    
T  46255132 tttagagattatatgaaaaatcagaatctattttgtgtttgtttacggtaataaaaatcac 46255192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 379 - 480
Target Start/End: Complemental strand, 1184452 - 1184350
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatta-tattttagagattttatgaaaaatcaggatctattttacgtttgt 477  Q
    ||||||||||||||||||||||| |  | |||||||  ||||||||| | |||| | ||||||| ||||||| ||||||||  ||||||| |  ||||||    
T  1184452 gtttgttacggattaaaataaaaatattattgacatttaataatttaaatattatttttttagacattttataaaaaatcaaaatctattgtgtgtttgt 1184353  T
Q  478 tta 480  Q
    |||    
T  1184352 tta 1184350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 641 - 679
Target Start/End: Complemental strand, 7238823 - 7238785
Alignment:
Q  641 tttttagattctgattttattaaaaagcagtaacaaacg 679  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  7238823 tttttagattctgatttttttaaaaagctgtaacaaacg 7238785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 227
Target Start/End: Complemental strand, 4145328 - 4145259
Alignment:
Q  158 ctatagtatagcagaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtca 227  Q
    |||||| ||||||||||||||| |||| | ||||||||||  ||| |||||| | |||||||| ||||||    
T  4145328 ctatagcatagcagaatttgaacaaattgttattgttccaccatacgctattcagtacaaaatgttgtca 4145259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 557
Target Start/End: Complemental strand, 7070563 - 7070518
Alignment:
Q  512 aatttagtttgtttggatacaaacttataaaagagattttttgtta 557  Q
    ||||||||||||||||||||||   ||||| |||||||||||||||    
T  7070563 aatttagtttgtttggatacaacaatataagagagattttttgtta 7070518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 398 - 455
Target Start/End: Original strand, 10117967 - 10118024
Alignment:
Q  398 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaa 455  Q
    |||| ||||||||||||  ||||||| ||||||||| |||||||||||| || |||||    
T  10117967 aaaaatgattttgacattcaataattcagagattattttttagagatttaatcaaaaa 10118024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 381 - 414
Target Start/End: Original strand, 28450674 - 28450707
Alignment:
Q  381 ttgttacggattaaaataaaagtgattttgacat 414  Q
    |||||||| |||||||||||||||||||||||||    
T  28450674 ttgttacgaattaaaataaaagtgattttgacat 28450707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 508 - 565
Target Start/End: Original strand, 29618243 - 29618300
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||||||||||||||||| |||||||   ||||||| |||||| || |||||||||||    
T  29618243 aaataatttagtttgtttagatacaactatataaaaaagatttgttattacaaaatta 29618300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 512 - 565
Target Start/End: Complemental strand, 32640811 - 32640758
Alignment:
Q  512 aatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||||||||||||||||||||||  ||||||| |  |||||| |||||||||||    
T  32640811 aatttagtttgtttggatacaaatatataaaataatttttttattacaaaatta 32640758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 123; Significance: 8e-63; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 380 - 599
Target Start/End: Complemental strand, 35308355 - 35308136
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttt 479  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  35308355 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttgcgtttgttt 35308256  T
Q  480 accgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga--ttttttgttacaaaattaatttttaatatt 577  Q
    |||||  ||| ||||||       ||||||||||||||||||||||||||||||   |||||||| ||  ||||||||||||||||||   || ||| ||    
T  35308255 accgtgataaaaatcactttttttaaacaaataatttagtttgtttggatacaactatataaaagggattttttttgttacaaaatta--gttcaatctt 35308158  T
Q  578 ttaaaccatattttctctctcc 599  Q
    ||||| ||||||||||||||||    
T  35308157 ttaaatcatattttctctctcc 35308136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 6007546 - 6007764
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| ||||||||    
T  6007546 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcagaatgtattttgcgtttgtt 6007645  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||||||       ||||||||||| ||||||||||| ||||||   |||||||| ||||||||||| ||||||||   || ||| |||    
T  6007646 taccgtaataaaaatcactttttttaaacaaataatctagtttgtttgaatacaactatataaaagggattttttgttgcaaaatta--gttcaatcttt 6007743  T
Q  579 taaaccatattttctctctcc 599  Q
    |||| ||||||||||||||||    
T  6007744 taaatcatattttctctctcc 6007764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 5764755 - 5764973
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  5764755 gtttgttacaaattaaaataaaagtgattttgacataaaataatttagcgattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 5764854  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||||||       ||||||||||| |  |||||||||||||||   |||||||| |||||||||||||||| |||   || |||||||    
T  5764855 taccgtaataaaaatcactttttttaaacaaataatctgatttgtttggatacaactatataaaagggattttttgttacaaagtta--cttcaatattt 5764952  T
Q  579 taaaccatattttctctctcc 599  Q
    ||| | |||||||||||||||    
T  5764953 taagcaatattttctctctcc 5764973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 379 - 598
Target Start/End: Original strand, 15199604 - 15199821
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||    
T  15199604 gtttattacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaaactattttatgtttgtt 15199703  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||| ||| ||| ||||||       ||||||||||||||||||||||| ||||||   ||||||||   |||||| |||||||||||   || ||| |||    
T  15199704 tactgtaataaaaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaaggagttttttattacaaaatta--gttcaatcttt 15199801  T
Q  579 taaaccatattttctctctc 598  Q
    ||||  ||||||||||||||    
T  15199802 taaataatattttctctctc 15199821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 13916412 - 13916593
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||     |||||||||||||||||||| ||||||||||||||||||||||||| |||  ||||||||| ||||||||    
T  13916412 gtttgttacggattaaaataaaagt-----tgacataaaataatttagagtttatattttagagattttatgaaaagtcaaaatctattttgcgtttgtt 13916506  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||| || ||| ||||||       ||||||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||    
T  13916507 taccataataaaaatcacgttttttaaacaaataatttagtttgtttggatacaactatataaaagggattttttgttacaaaatta 13916593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 379 - 495
Target Start/End: Complemental strand, 1153882 - 1153766
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  1153882 gtttgttacagattaaaataaaagtgattttgatataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 1153783  T
Q  479 taccgtactaagaatca 495  Q
    ||||||| ||| |||||    
T  1153782 taccgtaataaaaatca 1153766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 379 - 595
Target Start/End: Complemental strand, 17073198 - 17072983
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||||||||| |||||||    
T  17073198 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatatattatagattttgtgaaaaatcagaatctattttatgtttgtt 17073099  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatatt 577  Q
    || | |  ||| ||| ||       ||||| ||||| || |||||||||||||||   ||||||||||| |||||| |||||||||||   || ||| ||    
T  17073098 tagcatgataaaaattactttttttaaacatataatataatttgtttggatacaactatataaaagagatttttttattacaaaatta--gttcaatctt 17073001  T
Q  578 ttaaaccatattttctct 595  Q
    ||||| ||||||||||||    
T  17073000 ttaaatcatattttctct 17072983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 379 - 595
Target Start/End: Original strand, 17575072 - 17575287
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||||||||| |||||||    
T  17575072 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatatattatagattttgtgaaaaatcagaatctattttatgtttgtt 17575171  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatatt 577  Q
    || | |  ||| ||| ||       ||||| ||||| || |||||||||||||||   ||||||||||| |||||| |||||||||||   || ||| ||    
T  17575172 tagcatgataaaaattactttttttaaacatataatataatttgtttggatacaactatataaaagagatttttttattacaaaatta--gttcaatctt 17575269  T
Q  578 ttaaaccatattttctct 595  Q
    ||||| ||||||||||||    
T  17575270 ttaaatcatattttctct 17575287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 27882667 - 27882481
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||  ||||||||| ||||||||    
T  27882667 gtttgttacggattaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaaatcaaaatctattttgcgtttgtt 27882568  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagatttt-ttgttacaaaatta 565  Q
    || |||| ||| |||||        ||| ||||||||||||||||||||| |||    |||||||| |||||| ||||||||||||||    
T  27882567 tagcgtagtaaaaatca-tttttttaaaaaaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaatta 27882481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 28022847 - 28022661
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||||||  ||||||||| ||||||||    
T  28022847 gtttgttacggattaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaaatcaaaatctattttgcgtttgtt 28022748  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagatttt-ttgttacaaaatta 565  Q
    || |||| ||| |||||        ||| ||||||||||||||||||||| |||    |||||||| |||||| ||||||||||||||    
T  28022747 tagcgtagtaaaaatca-tttttttaaaaaaataatttagtttgtttggaaacagctatataaaagcgattttattgttacaaaatta 28022661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 380 - 565
Target Start/End: Complemental strand, 342897 - 342712
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttt 479  Q
    ||||||||  |||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||||  | | |||| ||||||||| | |||||||    
T  342897 tttgttacttattaaattaaaagtgattttcacaatgaataatttagagattatattttagagattttattcatattcagaatctattttgcatttgttt 342798  T
Q  480 accgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||||| ||| |||||        ||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||    
T  342797 accgtaataaaaatcattttttttaaataaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaatta 342712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 40737293 - 40737486
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttga-------cataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttac 471  Q
    ||||||||||||||||||||||||||||||||        |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |    
T  40737293 gtttgttacggattaaaataaaagtgattttggattttgccatataataatttagagattatattttagagattttatgaaaaatcagaatctattttgc 40737392  T
Q  472 gtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
     ||| |||||| |  ||| |||||         |||||||||| ||||||||||||||||||   ||||||||| |||||||||||||||||||    
T  40737393 atttttttaccttgataaaaatcaattcttttgaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaatta 40737486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 414 - 599
Target Start/End: Complemental strand, 28828215 - 28828030
Alignment:
Q  414 taaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataa 513  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||||||||| ||| ||||||       ||||||||||    
T  28828215 taaaataatttagagattatagtttagagattttataaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcactttttttaaacaaataa 28828116  T
Q  514 tttagtttgtttggatacaaacttataaaagagatttttt--gttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||| |||||||||||||||   |||||||| ||||||||  |||||||| |||   || ||| ||||||| ||||||||| ||||||    
T  28828115 tttaatttgtttggatacaactatataaaagggatttttttcgttacaaagtta--gttcaatcttttaaatcatattttcactctcc 28828030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 384 - 568
Target Start/End: Original strand, 24981386 - 24981571
Alignment:
Q  384 ttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccg 483  Q
    ||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||   |||||||||| |||| |||||||    
T  24981386 ttacgtattaaaataaaattgattttgtcataaaataatatagagattatattttagagattttatgaaaaatcgaaatctattttatgtttttttaccg 24981485  T
Q  484 tactaagaatca-cnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatt 568  Q
    || ||| |||||         | | ||||||||||||||||||| |||| |   | |||||| |||||||||||||||||||||||    
T  24981486 taataaaaatcatttttttttatataaataatttagtttgtttgaatacgactatgtaaaagggattttttgttacaaaattaatt 24981571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 390 - 562
Target Start/End: Original strand, 27964698 - 27964872
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataattt--agagattatattttagagattttatgaaaaatcaggatcta-ttttacgtttgtttaccgtac 486  Q
    |||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||||||||||| |||||| ||||| |||| ||||| |||| ||||     
T  27964698 attaaaataaaagtgattttgacagaaaataatttagagagattgtattttagagattttatgaataatcagaatctattttttcgttt-tttatcgtaa 27964796  T
Q  487 taagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaa 562  Q
    | | ||||||       |||||||||||| |||||||||||||||||   |||||||| |||||||||||||||||    
T  27964797 tcaaaatcacttttttaaaacaaataattgagtttgtttggatacaactatataaaagggattttttgttacaaaa 27964872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 418 - 565
Target Start/End: Original strand, 1030294 - 1030441
Alignment:
Q  418 ataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataattta 517  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||| | ||||||||||||| ||| |||||        ||| |||| ||||     
T  1030294 ataatttagagattatattttagagattttatgaaaaatcaaaatctattttgcatttgtttaccgtagtaaaaatcaattttttaaaaaaaattatttg 1030393  T
Q  518 gtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||||||||||||   |||||||| ||||||||||||||||||||    
T  1030394 gtttgtttggatacaactatataaaagtgattttttgttacaaaatta 1030441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 379 - 480
Target Start/End: Original strand, 4443849 - 4443951
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagaga-ttttatgaaaaatcaggatctattttacgtttgt 477  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||  |||||||||  ||||||    
T  4443849 gtttgttacggattaaaataaaagtgattttgacataaaataatttatagattatattttaaagatttttatgaaaaatcaaaatctattttgggtttgt 4443948  T
Q  478 tta 480  Q
    |||    
T  4443949 tta 4443951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 389 - 568
Target Start/End: Original strand, 28022256 - 28022423
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtacta 488  Q
    |||||||||||||||||||||||||||||||||||||||||            |||||||||||||| ||| |||||||||    |||||||||||| ||    
T  28022256 gattaaaataaaagtgattttgacataaaataatttagaga------------gattttatgaaaaaccagaatctattttttcgttgtttaccgtaata 28022343  T
Q  489 agaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatt 568  Q
    | ||||||       ||||||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||    
T  28022344 aaaatcactttttaaaaacaaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaactaatt 28022423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 339730 - 339830
Alignment:
Q  382 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttac 481  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||| |||||||||  ||||||||| |||||||||||    
T  339730 tgttatggattaaaataaaagtgattttgacatcgaataatttagagattattttttagagattttacgaaaaatcaaaatctattttgcgtttgtttac 339829  T
Q  482 c 482  Q
    |    
T  339830 c 339830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 389 - 568
Target Start/End: Original strand, 27882075 - 27882243
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtacta 488  Q
    |||||||||||||||||||||||||||||||||||||||||            |||||||||||||| ||| |||||||||    |||||||||||| ||    
T  27882075 gattaaaataaaagtgattttgacataaaataatttagaga------------gattttatgaaaaaccagaatctattttttcgttgtttaccgtaata 27882162  T
Q  489 agaatcacnnnnnnnaaac-aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatt 568  Q
    | ||||||       |||| ||||||||||||||||||||||||||   |||||||||||||||||||||||||| |||||    
T  27882163 aaaatcactttttaaaaacaaaataatttagtttgtttggatacaactatataaaagagattttttgttacaaaactaatt 27882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 431 - 599
Target Start/End: Original strand, 5424697 - 5424864
Alignment:
Q  431 tatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggata 530  Q
    ||||||||||||||||||||||||||||| ||||||||| | ||||||||  ||| ||| ||| ||       |||||||||||||||||||||||||||    
T  5424697 tatattttagagattttatgaaaaatcagaatctattttgcctttgtttagtgtaataaaaataactttttttaaacaaataatttagtttgtttggata 5424796  T
Q  531 caaacttataaaagaga-ttttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||   |||||||| || ||||||||||||||||||   || ||| ||||||| ||||||||| ||||||    
T  5424797 caactatataaaagggatttttttgttacaaaatta--gttcaatcttttaaagcatattttcactctcc 5424864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 380 - 595
Target Start/End: Complemental strand, 5424689 - 5424492
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttt 479  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||              ||||||| |||||| ||| ||||||||| |||||||||    
T  5424689 tttgttacggattaaaataaaagtgattttaacataaaataatttaga--------------gattttaggaaaaagcagaatctattttgcgtttgttt 5424604  T
Q  480 accgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatttt 579  Q
    ||| || ||| |||||        |||||||||| |||||||||||||||||||   ||||||||||| ||||||||||||||||  | || ||| ||||    
T  5424603 accttaataaaaatca-tctttttaaacaaataa-ttagtttgtttggatacaactatataaaagagactttttgttacaaaatt--tgttcaatctttt 5424508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 431 - 565
Target Start/End: Original strand, 6007955 - 6008089
Alignment:
Q  431 tatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggata 530  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||| ||| |||| ||| ||||||       |||||||| || ||||||||||| |||    
T  6007955 tatattttagagattttgtgaaaaatcagaatctattttgcgtttgcttatcgtaataaaaatcacattttttaaacaaattatctagtttgtttgcata 6008054  T
Q  531 caaacttataaaagagattttttgttacaaaatta 565  Q
    |||   |||||||| ||||||||||||||||||||    
T  6008055 caattatataaaagggattttttgttacaaaatta 6008089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 379 - 480
Target Start/End: Complemental strand, 11464707 - 11464606
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||||| |||||||||||| ||||   || |||||| ||||||||    
T  11464707 gtttgttacagattaaaataaaaatgattttgacgaaaaataatttagagattatattttaaagattttatgaataatctaaatttattttgcgtttgtt 11464608  T
Q  479 ta 480  Q
    ||    
T  11464607 ta 11464606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 32795259 - 32795475
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  |||||| ||||| | ||||||||||||||||||||||| ||||| ||||| ||||||||| |||||| |  |||||||||  |||||||    
T  32795259 gtttgttacatattaaattaaaaataattttgacataaaataatttagatattat-ttttatagattttattaaaaattaaaatctattttgtgtttgtt 32795357  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| || |||       ||| ||||||||||||||||||| ||||||   |||||||  |||||||    |||||||||  ||| |||||||    
T  32795358 taccgtagtaaaaaacac-ttttttaaataaataatttagtttgtttgaatacaactatataaaatggatttttctcaacaaaatta--tttcaatattt 32795454  T
Q  579 taaaccatattttctctctcc 599  Q
    | || ||||||||||||||||    
T  32795455 tgaatcatattttctctctcc 32795475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 454
Target Start/End: Complemental strand, 27965885 - 27965810
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 454  Q
    |||| |||| |||||||||||||||||||||||||||||||||| |||||||||| |||| ||||| |||||||||    
T  27965885 gtttattactgattaaaataaaagtgattttgacataaaataatatagagattattttttggagatattatgaaaa 27965810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 27917424 - 27917596
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||              ||||||||||||   | ||||||   ||||||    
T  27917424 gtttgttacgaattaaaataaaagtgattttgatataaaataatttaaagatta--------------tatgaaaaatcacattatattttgtatttgtt 27917509  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||| ||| ||| ||||||       ||||||||||| ||||||||||||||||||   ||||||||| |||||||||||||||||||    
T  27917510 tactgtaataaaaatcactttttttaaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaatta 27917596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 27963843 - 27964015
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||| ||||||              ||||||||||||   | ||||||   ||||||    
T  27963843 gtttgttacgaattaaaataaaagtgattttgatataaaataatttaaagatta--------------tatgaaaaatcacattatattttgtatttgtt 27963928  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||| ||| ||| ||||||       ||||||||||| ||||||||||||||||||   ||||||||| |||||||||||||||||||    
T  27963929 tactgtaataaaaatcactttttttaaacaaataatctagtttgtttggatacaactatataaaagaaattttttgttacaaaatta 27964015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 599
Target Start/End: Original strand, 17073204 - 17073379
Alignment:
Q  423 ttagagattatattttagaga-ttttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagttt 521  Q
    ||||||||||||||||||| | |||||| ||||||||| ||||||||| ||||| ||||||||  ||| | | ||       ||||||| ||| ||||||    
T  17073204 ttagagattatattttagaaatttttattaaaaatcagaatctattttgcgtttttttaccgttataaaatttactttttttaaacaaacaatctagttt 17073303  T
Q  522 gtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||| || | | |||||   |||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  17073304 gtttggatataaccgtgtaaaatgaattttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 17073379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 423 - 599
Target Start/End: Complemental strand, 17575066 - 17574891
Alignment:
Q  423 ttagagattatattttagaga-ttttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagttt 521  Q
    ||||||||||||||||||| | |||||| ||||||||| ||||||||| ||||| ||||||||  ||| | | ||       ||||||| ||| ||||||    
T  17575066 ttagagattatattttagaaatttttattaaaaatcagaatctattttgcgtttttttaccgttataaaatttactttttttaaacaaacaatctagttt 17574967  T
Q  522 gtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||| || | | |||||   |||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  17574966 gtttggatataaccgtgtaaaatgaattttttgttacaaaatta--gttcaatcttttaaacaatattttctctctcc 17574891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 27881244 - 27881373
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    |||||||||| ||| ||||||||   | |||||| ||||||||||| | | ||| ||||||       ||||||||||| ||||||||||||||||||      
T  27881244 tttagagattatataaaaaatcacattatattttgcgtttgtttactgcaataaaaatcactttttttaaacaaataatctagtttgtttggatacaact 27881343  T
Q  536 ttataaaagagattttttgttacaaaatta 565  Q
     ||||||||| |||||||||||||||||||    
T  27881344 atataaaagaaattttttgttacaaaatta 27881373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 436 - 565
Target Start/End: Original strand, 28021425 - 28021554
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    |||||||||| ||| ||||||||   | |||||| ||||||||||| | | ||| ||||||       ||||||||||| ||||||||||||||||||      
T  28021425 tttagagattatataaaaaatcacattatattttgcgtttgtttactgcaataaaaatcactttttttaaacaaataatctagtttgtttggatacaact 28021524  T
Q  536 ttataaaagagattttttgttacaaaatta 565  Q
     ||||||||| |||||||||||||||||||    
T  28021525 atataaaagaaattttttgttacaaaatta 28021554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 389 - 484
Target Start/End: Complemental strand, 7285033 - 7284934
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat----gaaaaatcaggatctattttacgtttgtttaccgt 484  Q
    |||||| |||||||||||||| ||||  ||||||||| | ||||| |||||||||||||||     ||||||||| || |||||||||||||||||||||    
T  7285033 gattaagataaaagtgatttttacattgaataatttaaaaattattttttagagattttataaagaaaaaatcagaatttattttacgtttgtttaccgt 7284934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 379 - 433
Target Start/End: Complemental strand, 35102789 - 35102735
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 433  Q
    |||||||||  |||||||||||||||||||||| |||||||||||||||||||||    
T  35102789 gtttgttacatattaaaataaaagtgattttgatataaaataatttagagattat 35102735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 599
Target Start/End: Complemental strand, 40796342 - 40796179
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    |||||||||||||||||||||||| ||||||||  |||||||||||  |  ||| |||||        ||||||||||| |||||||||||||||||       
T  40796342 tttagagattttatgaaaaatcagaatctatttagcgtttgtttactatgataaaaatcatttttttaaaacaaataatctagtttgtttggatacagct 40796243  T
Q  536 ttataaaa--gagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
     |||||||  ||  |||||| |||||||||||   || ||| ||||||||||||||||||||||||    
T  40796242 atataaaaatgaattttttttttacaaaatta--gttcaatcttttaaaccatattttctctctcc 40796179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 27881201 - 27881257
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 435  Q
    |||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  27881201 gtttgttacgaattaaaatgaaattgattttgatataaaataatttagagattatat 27881257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 28021382 - 28021438
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 435  Q
    |||||||||| |||||||| ||| ||||||||| |||||||||||||||||||||||    
T  28021382 gtttgttacgaattaaaatgaaattgattttgatataaaataatttagagattatat 28021438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 391 - 474
Target Start/End: Original strand, 28152350 - 28152434
Alignment:
Q  391 ttaaaataaaagtgattttgacataaaataa-tttagagattatattttagagattttatgaaaaatcaggatctattttacgtt 474  Q
    |||||||||||||||||||||||| |||||| |||| |||||  ||||| ||||||| || ||||||||| ||||||||| ||||    
T  28152350 ttaaaataaaagtgattttgacatcaaataattttatagattcaatttttgagatttgataaaaaatcagaatctattttgcgtt 28152434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 33489545 - 33489493
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  33489545 gtttgttacgaattaaaataaaagtgattttgacattcaataatttagagatt 33489493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 391 - 434
Target Start/End: Original strand, 5424259 - 5424302
Alignment:
Q  391 ttaaaataaaagtgattttgacataaaataatttagagattata 434  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  5424259 ttaaaataaaagtgattttgacataaaataatttaaagattata 5424302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 398 - 453
Target Start/End: Original strand, 18969454 - 18969509
Alignment:
Q  398 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaa 453  Q
    |||| ||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  18969454 aaaaatgattttgacattcaataatttagagattattttttagagattttatgaaa 18969509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 431 - 530
Target Start/End: Complemental strand, 5765537 - 5765438
Alignment:
Q  431 tatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggata 530  Q
    ||||||||||||||||| ||||||||||  |||||||||  |||||||||| ||| ||| ||||||       ||||||||||| |||||||||| ||||    
T  5765537 tatattttagagattttgtgaaaaatcaaaatctattttgtgtttgtttactgtaataaaaatcacattttttaaacaaataatctagtttgtttagata 5765438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 398 - 480
Target Start/End: Complemental strand, 18947085 - 18947003
Alignment:
Q  398 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    |||| ||||||||||||  |||||||||||| |||| ||||||||||||||||||||| ||  ||| |||||  |||||||||    
T  18947085 aaaaatgattttgacattcaataatttagaggttattttttagagattttatgaaaaagcataatcgattttgtgtttgttta 18947003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 171 - 237
Target Start/End: Original strand, 41931049 - 41931115
Alignment:
Q  171 gaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggct 237  Q
    ||||||||| |||| | |||||||||| ||||||||||||| |||||||| |||||||||| |||||    
T  41931049 gaatttgaataaattgttattgttccacgataagctatttagtacaaaatattgtcaaacaacggct 41931115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 386 - 422
Target Start/End: Complemental strand, 28828567 - 28828531
Alignment:
Q  386 acggattaaaataaaagtgattttgacataaaataat 422  Q
    |||||||||||||||||||||||||||||||||||||    
T  28828567 acggattaaaataaaagtgattttgacataaaataat 28828531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 431
Target Start/End: Complemental strand, 40796381 - 40796333
Alignment:
Q  383 gttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||| ||||||||||||||||||| |||||||| |||||||||||||||    
T  40796381 gttatggattaaaataaaagtgatcttgacatataataatttagagatt 40796333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 380 - 427
Target Start/End: Complemental strand, 45045587 - 45045540
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttaga 427  Q
    |||||||||||||||||||||||| ||||||||||||| | |||||||    
T  45045587 tttgttacggattaaaataaaagtaattttgacataaattgatttaga 45045540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 379 - 417
Target Start/End: Original strand, 5765544 - 5765582
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaa 417  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  5765544 gtttgttacgaattaaaataaaagtgattttgacataaa 5765582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 6007489 - 6007539
Alignment:
Q  383 gttacggattaaaataaaagtgattttgacataaaataatttagagattat 433  Q
    ||||||||||||||| ||||| |||||| | ||||||||||||||||||||    
T  6007489 gttacggattaaaattaaagtaattttgtcttaaaataatttagagattat 6007539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 429
Target Start/End: Original strand, 17072756 - 17072798
Alignment:
Q  387 cggattaaaataaaagtgattttgacataaaataatttagaga 429  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  17072756 cggattaaaataaaggtgattttgatataaaataatttagaga 17072798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 429
Target Start/End: Complemental strand, 17575515 - 17575473
Alignment:
Q  387 cggattaaaataaaagtgattttgacataaaataatttagaga 429  Q
    |||||||||||||| |||||||||| |||||||||||||||||    
T  17575515 cggattaaaataaaggtgattttgatataaaataatttagaga 17575473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 240
Target Start/End: Original strand, 1310124 - 1310198
Alignment:
Q  166 tagcagaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggctata 240  Q
    |||||||||||||| |||| | ||||||||| |||||  ||||||| ||||| || |||| ||| ||||||||||    
T  1310124 tagcagaatttgaacaaattgctattgttccttgatacactatttagtacaatatattgtgaaatagcggctata 1310198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 533
Target Start/End: Original strand, 4443963 - 4443992
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaa 533  Q
    ||||||||||||||||||||||||||||||    
T  4443963 aaacaaataatttagtttgtttggatacaa 4443992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 433
Target Start/End: Complemental strand, 44964293 - 44964241
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 433  Q
    |||||||  ||||||||||||||||| ||||| || ||||||||||||||||||    
T  44964293 tttgttatagattaaaataaaagtgaatttgatat-aaataatttagagattat 44964241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 5e-61; HSPs: 57)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 380 - 599
Target Start/End: Complemental strand, 21388631 - 21388414
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttt 479  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  21388631 tttgttacggattaaaatcaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcataatctattttacatttgttt 21388532  T
Q  480 accgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatttt 579  Q
    ||| || ||| ||||||       ||||||||||| ||||||||||||||||||   |||||||| |||||||||||| |||||||   || ||| ||||    
T  21388531 accataataataatcactttttttaaacaaataatctagtttgtttggatacaactatataaaagggattttttgttataaaatta--gttcaatctttt 21388434  T
Q  580 aaaccatattttctctctcc 599  Q
    |||| |||||||||||||||    
T  21388433 aaacaatattttctctctcc 21388414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 54356143 - 54356362
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||  |||||||    
T  54356143 gtttgttacggattaaagtaaaagtgattttgacattaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgtgtttgtt 54356242  T
Q  479 taccgtactaagaatcac-nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatt 577  Q
    |||| || ||| ||||||        ||||||||||||||||||||||||||| ||   |||||||| ||||||||||||||||||||   || ||| ||    
T  54356243 taccataataaaaatcacttttttttaaacaaataatttagtttgtttggatataactatataaaagggattttttgttacaaaatta--gttcaatctt 54356340  T
Q  578 ttaaaccatattttctctctcc 599  Q
    ||||| ||||||||||||||||    
T  54356341 ttaaatcatattttctctctcc 54356362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 10332975 - 10333194
Alignment:
Q  379 gtttgttacggattaaaataaaagt-gattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgt 477  Q
    |||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||    
T  10332975 gtttgttacatattaaaataaaagttgattttgacataaaataatttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgt 10333074  T
Q  478 ttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatt 577  Q
    ||| |||| ||| ||||||       |||||| |||| |||||||||| |||||||   |||||||| ||||||||||||||||||||   || ||| ||    
T  10333075 ttagcgtaataaaaatcactttttttaaacaagtaatctagtttgtttagatacaactatataaaagggattttttgttacaaaatta--gttcaatctt 10333172  T
Q  578 ttaaaccatattttctctctcc 599  Q
    |||||| |||||||||||||||    
T  10333173 ttaaacaatattttctctctcc 10333194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 379 - 595
Target Start/End: Complemental strand, 7433812 - 7433598
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||||||||    
T  7433812 gtttgttacggattaaaataaaagtaattttgacataaaataatttagagattatatcgtagagattttgtgaaaaatcagaatctattttacgtttgtt 7433713  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||| ||| ||| |||||        ||||||||||| ||| ||||||||||||||   |||||||   |||||||||||||||||||   |||||| |||    
T  7433712 tactgtaataaaaatcaattttttaaaacaaataatctagcttgtttggatacaactatataaaatgaattttttgttacaaaatta--gtttaatcttt 7433615  T
Q  579 taaaccatattttctct 595  Q
    |||| ||||||||||||    
T  7433614 taaatcatattttctct 7433598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 8707893 - 8708111
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| ||||||||    
T  8707893 gtttgttacaaattaaaaaaaaagtgattttcacataaaataatttagagattatattttatagattttgtgaaaaatcagaatctattttgcgtttgtt 8707992  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||||||       ||||||||||| | |||||||| |||||||   ||||||||| |||||||||||||||||||   || ||| |||    
T  8707993 taccgtaataaaaatcaccttttttaaacaaataatcttgtttgttttgatacaactatataaaagaaattttttgttacaaaatta--gttcaatcttt 8708090  T
Q  579 taaaccatattttctctctcc 599  Q
    |||| ||||||||||||||||    
T  8708091 taaatcatattttctctctcc 8708111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 9059780 - 9059998
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||| ||||||||    
T  9059780 gtttgttacaaattaaaaaaaaagtgattttcacataaaataatttagagattatattttatagattttgtgaaaaatcagaatctattttgcgtttgtt 9059879  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||||||       ||||||||||| | |||||||| |||||||   ||||||||| |||||||||||||||||||   || ||| |||    
T  9059880 taccgtaataaaaatcaccttttttaaacaaataatcttgtttgttttgatacaactatataaaagaaattttttgttacaaaatta--gttcaatcttt 9059977  T
Q  579 taaaccatattttctctctcc 599  Q
    |||| ||||||||||||||||    
T  9059978 taaatcatattttctctctcc 9059998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 40285254 - 40285037
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||||    
T  40285254 gtttgttacggtttaaaataaaagtgattttgatataaaataatttagagattatattctagagattttgtgaaaaatcagaatctgttttacgtttgtt 40285155  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| |||||          | ||||||| |||||| |||||||||||   ||||||||  ||||||||||||||||||||  || |||||||    
T  40285154 taccgtaataaaaatca-tttttttttataaataatctagtttatttggatacaactatataaaaggaattttttgttacaaaattaa--ttcaatattt 40285058  T
Q  579 taaaccatattttctctctcc 599  Q
    |||| ||||||||||||||||    
T  40285057 taaatcatattttctctctcc 40285037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 379 - 562
Target Start/End: Complemental strand, 24485807 - 24485623
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatga-aaaatcaggatctattttacgtttgt 477  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||||||| |||||||||  ||||||    
T  24485807 gtttgttacagattaatataaaagtgattttgacataaaataatttttagattatattttagagattttatgaaaaaatcagaatctattttgtgtttgt 24485708  T
Q  478 ttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaa 562  Q
    |||||||| ||| ||| ||       ||||||||||||||||||||||||||||||   ||||||| || |||||||||||||||    
T  24485707 ttaccgtaataaaaattacttttttaaaacaaataatttagtttgtttggatacaactatataaaataggttttttgttacaaaa 24485623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 379 - 596
Target Start/End: Original strand, 11632938 - 11633154
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||| ||||||||||  ||||||||| ||||||||    
T  11632938 gtttgttacggatttaaataaaagtgattttgacataaaataatttagagattatattttaagaattttgtgaaaaatcaaaatctattttgcgtttgtt 11633037  T
Q  479 taccgtactaagaatca-cnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatt 577  Q
    ||||||| ||| |||||         ||| ||||||| ||||||||||||||||||   ||||||||||||||||| |||||||||||   || ||| ||    
T  11633038 taccgtaataaaaatcatttttttttaaataaataatctagtttgtttggatacaactatataaaagagattttttattacaaaatta--gttcaatctt 11633135  T
Q  578 ttaaaccatattttctctc 596  Q
    ||||| |||||||||||||    
T  11633136 ttaaatcatattttctctc 11633154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 379 - 533
Target Start/End: Complemental strand, 34795252 - 34795099
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34795252 gtttgttacggattaaaataaaagtaattttgacgtaaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgtt 34795153  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 533  Q
    ||| ||| ||| |||||        ||||||||||| |||||||||| |||||||    
T  34795152 tacggtaataaaaatca-tttttttaaacaaataatctagtttgtttcgatacaa 34795099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 3942787 - 3942604
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| || ||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||  |||||||    
T  3942787 gtttgttatgggttaaaatgaaagtgattttgacttaaaataatttagagattatattttagaga-tttatgaaaaatcagaatctattttgtgtttgtt 3942689  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||||   ||| ||||||       ||||||||||| ||||||||||| ||||||   |||||||| ||||||||||||||||||||    
T  3942688 taccg--ataaaaatcactttttttaaacaaataatctagtttgtttgaatacaactatataaaagggattttttgttacaaaatta 3942604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 379 - 597
Target Start/End: Original strand, 12100937 - 12101152
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||||| || |||||||||||||||    
T  12100937 gtttgttacggattaaaataaaagtgattttgacataaaataatttaaaaattatattttagtaattttatgaaaaatcagaatttattttacgtttgtt 12101036  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
     | |||| ||| ||| |        ||| ||||||| || |||||||||||| ||   |||||||||||| ||||||||||||||||   || ||| |||    
T  12101037 aatcgtaataaaaatta-tttttttaaataaataatctaatttgtttggatataactatataaaagagatgttttgttacaaaatta--gttcaatcttt 12101133  T
Q  579 taaaccatattttctctct 597  Q
    ||||| |||||||||||||    
T  12101134 taaacaatattttctctct 12101152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 379 - 530
Target Start/End: Complemental strand, 26863239 - 26863088
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||| || ||||| ||| ||||||||    
T  26863239 gtttgttacggattaaaataaaagtgattttgacatcaaataatttagagattatattttagagattttgtgtaaaattagaatctactttgcgtttgtt 26863140  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggata 530  Q
    ||| ||| ||| ||||||       ||||||||||| |||||||||||||||    
T  26863139 tactgtaataaaaatcactttttttaaacaaataatctagtttgtttggata 26863088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 391 - 565
Target Start/End: Complemental strand, 26168088 - 26167913
Alignment:
Q  391 ttaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaag 490  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||   || |||| ||||||||||| |||  ||     
T  26168088 ttaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcag--actcttttgcgtttgtttacagtaacaaa 26167991  T
Q  491 aatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga---ttttttgttacaaaatta 565  Q
    ||||||       ||| ||||||||||||||||||||||||||   |||||||||||   ||||||||||||||||||    
T  26167990 aatcactttttttaaataaataatttagtttgtttggatacaactatataaaagagatttttttttgttacaaaatta 26167913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 384 - 599
Target Start/End: Original strand, 26760446 - 26760658
Alignment:
Q  384 ttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccg 483  Q
    |||||||||||| ||||||| |||||||  ||||||||||||||||||||||||||||||||||||  ||||| || ||||||||| |||||||||||||    
T  26760446 ttacggattaaattaaaagttattttgatgtaaaataatttagagattatattttagagattttatataaaattagaatctattttgcgtttgtttaccg 26760545  T
Q  484 tactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaac 583  Q
    |  ||| ||| |        ||||||||||||||||||||||| ||||||   ||||||||| || |||||||| ||||||||  || | | ||||||||    
T  26760546 tggtaaaaatta-tttttttaaacaaataatttagtttgtttgaatacaactatataaaagaaatattttgttaaaaaattaa--ttcattcttttaaac 26760642  T
Q  584 catattttctctctcc 599  Q
    |||||||| |||||||    
T  26760643 catattttttctctcc 26760658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 23027649 - 23027752
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||||||| |||||||    
T  23027649 gtttgttacgaattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 23027748  T
Q  479 tacc 482  Q
    ||||    
T  23027749 tacc 23027752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 374 - 595
Target Start/End: Original strand, 21459481 - 21459703
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatga--aaaat-caggatctatttta 470  Q
    |||| |||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||  |  || ||  |||||||||     
T  21459481 ggctcgtttgttacatattaaaataaaagtgatttttacatcaaataatttagagattatattttagagattttatgattatgatgcataatctattttg 21459580  T
Q  471 cgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttt 570  Q
    | ||||||||||||  ||| ||||||       |||||||||||||||||||| | | |||||   ||||||||  |||||||||||||||||||   ||    
T  21459581 catttgtttaccgtgataaaaatcactttttttaaacaaataatttagtttgtgtaggtacaactatataaaaggaattttttgttacaaaatta--gtt 21459678  T
Q  571 taatattttaaaccatattttctct 595  Q
    |||| ||||||| ||||||||||||    
T  21459679 taatcttttaaaacatattttctct 21459703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 396 - 561
Target Start/End: Complemental strand, 47567954 - 47567788
Alignment:
Q  396 ataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatc- 494  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||| ||| ||||     
T  47567954 ataaaagtgagtttgacatcaaataatttagaaattatattttagagattttatgaaaaatcagaatctattttgcgtttgtttgccgtaataataatca 47567855  T
Q  495 acnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaa 561  Q
    |        ||||||||||| || ||||||||||||| |   |||||||| ||||||||||||||||    
T  47567854 atttttttaaaacaaataatctaatttgtttggatactactatataaaagggattttttgttacaaa 47567788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 379 - 495
Target Start/End: Complemental strand, 16106238 - 16106122
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| ||||||||||||||||||||||  |||||||||||||||| ||||| || |||||||||||||||||||||| ||||||||| ||||||||    
T  16106238 gtttgttatggattaaaataaaagtgatttttccataaaataatttagatattattttatagagattttatgaaaaatcagaatctattttgcgtttgtt 16106139  T
Q  479 taccgtactaagaatca 495  Q
    |||| || ||| |||||    
T  16106138 taccctaataaaaatca 16106122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 44869174 - 44869071
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||||||| |||||||    
T  44869174 gtttgttatggagtaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttaaaaaatcagaatctattttatgtttgtt 44869075  T
Q  479 tacc 482  Q
    ||||    
T  44869074 tacc 44869071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 391 - 599
Target Start/End: Original strand, 45585980 - 45586193
Alignment:
Q  391 ttaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttac-------cg 483  Q
    ||||||||||||||||||| ||||||||||||||||||||||  || ||||||||||||||||||| || || ||||||  ||||||||||        |    
T  45585980 ttaaaataaaagtgatttttacataaaataatttagagattactttatagagattttatgaaaaattagaatttattttgtgtttgtttacattttatag 45586079  T
Q  484 tactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaac 583  Q
    || ||| ||||||       ||||||||||||||||||||||| ||||||   ||||||||| |||||||||||||||||||   || ||| |||| |||    
T  45586080 taataaaaatcacctttttaaaacaaataatttagtttgtttgaatacaacaatataaaagatattttttgttacaaaatta--gttcaatcttttgaac 45586177  T
Q  584 catattttctctctcc 599  Q
    ||||||||| ||||||    
T  45586178 catattttcactctcc 45586193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 435 - 599
Target Start/End: Original strand, 54981819 - 54981980
Alignment:
Q  435 ttttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaa 534  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||| ||| ||| ||||||       ||||||||||| |||||||||| |||||||     
T  54981819 ttttagagattttatgaaaaatcagaatctattttgcgtttgtttacagtaataa-aatcaccttttttaaacaaataatctagtttgttttgatacaac 54981917  T
Q  535 cttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
      |||||||  ||||||||||||||||||||   || ||| |||||||  |||||||||||||||    
T  54981918 tatataaaacggattttttgttacaaaatta--gttcaatcttttaaaatatattttctctctcc 54981980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 431 - 533
Target Start/End: Complemental strand, 54981766 - 54981664
Alignment:
Q  431 tatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggata 530  Q
    |||| |||||||| ||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||       |||||||||||||||||||||| ||||    
T  54981766 tataatttagagactttatgaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcactttttttaaacaaataatttagtttgttttgata 54981667  T
Q  531 caa 533  Q
    |||    
T  54981666 caa 54981664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 396 - 480
Target Start/End: Original strand, 30917638 - 30917722
Alignment:
Q  396 ataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    ||||||||||||||| |||||||||||||| ||||||| || ||||||||||||||||||| |  ||||||||| ||||||||||    
T  30917638 ataaaagtgattttgtcataaaataatttatagattattttatagagattttatgaaaaattaaaatctattttccgtttgttta 30917722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 458
Target Start/End: Complemental strand, 10332923 - 10332845
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatca 458  Q
    ||||||||||||||||||||| |||||||||||| | ||| ||||||||||||||| |||||||| ||||||||||||||    
T  10332923 gtttgttacggattaaaataacagtgattttgacctgaaacaatttagagattataatttagaga-tttatgaaaaatca 10332845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 494
Target Start/End: Complemental strand, 23027990 - 23027884
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||| |||||||||||||||         |||||||||||||||||||||||| ||||||| ||||||||||  |||||||||| |||||||    
T  23027990 gtttgttacggactaaaataaaagtgat---------aaataatttagagattatattttaaagattttgtgaaaaatcaaaatctattttatgtttgtt 23027900  T
Q  479 taccgtactaagaatc 494  Q
    ||||||| ||| ||||    
T  23027899 taccgtaataaaaatc 23027884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 454
Target Start/End: Complemental strand, 44077962 - 44077887
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaa 454  Q
    ||||||||||||||||||||||| |||||| ||||||||||| |||||||||||| | ||||||||||| ||||||    
T  44077962 gtttgttacggattaaaataaaaatgatttagacataaaatattttagagattatttattagagattttgtgaaaa 44077887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 10296972 - 10297034
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttaga 441  Q
    |||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||    
T  10296972 gtttgttacggattaaaataaaagagatttttacatataataatttagagattatattttaga 10297034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 504 - 599
Target Start/End: Complemental strand, 24842568 - 24842476
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||||||||||||||||||||||||   |||||||||| ||||||||||||||||||   || ||||||||||| ||||||||||| ||||    
T  24842568 aaacaaataatttagtttgtttggatacaactatataaaagag-ttttttgttacaaaatta--gttcaatattttaaatcatattttctccctcc 24842476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 54142889 - 54142941
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  54142889 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt 54142941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 379 - 456
Target Start/End: Complemental strand, 25250518 - 25250441
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaat 456  Q
    ||||||||| ||| |||||| |  ||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||    
T  25250518 gtttgttaccgataaaaatatagctgattttgatataaaataatttagagattattttttagagattatatgaaaaat 25250441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 512 - 599
Target Start/End: Original strand, 46515033 - 46515118
Alignment:
Q  512 aatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||||||||||||  |||||||   |||||||||||||||||| ||||||||||   || ||||||||||||||||||||||||||||    
T  46515033 aatttagtttgttcagatacaacaatataaaagagattttttgatacaaaatta--gttcaatattttaaaccatattttctctctcc 46515118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 514 - 596
Target Start/End: Original strand, 10297423 - 10297503
Alignment:
Q  514 tttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 596  Q
    |||||||||||| ||||||||  |||||||||||||||||||||||||||||   || ||| ||| |||||||||||||||||    
T  10297423 tttagtttgttttgatacaaatatataaaagagattttttgttacaaaatta--gttcaatttttaaaaccatattttctctc 10297503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 379 - 441
Target Start/End: Original strand, 10309608 - 10309670
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttaga 441  Q
    |||||||||| |||||||||||||  ||||| ||||| |||||||||||||||||||||||||    
T  10309608 gtttgttacgaattaaaataaaaggaatttttacatataataatttagagattatattttaga 10309670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 380 - 425
Target Start/End: Original strand, 33832703 - 33832748
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataattta 425  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||    
T  33832703 tttgttacgaattaaaataaaagtgaatttgacataaaataattta 33832748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 515 - 568
Target Start/End: Original strand, 33832809 - 33832862
Alignment:
Q  515 ttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatt 568  Q
    |||||||||||||||||||   ||||||||||||||||||| ||||||||||||    
T  33832809 ttagtttgtttggatacaactatataaaagagattttttgtcacaaaattaatt 33832862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 562
Target Start/End: Original strand, 42583594 - 42583651
Alignment:
Q  505 aacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaa 562  Q
    |||||||||||||||||||||| ||||||   ||||||||||||||||||||| ||||    
T  42583594 aacaaataatttagtttgtttgaatacaactatataaaagagattttttgttataaaa 42583651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 568
Target Start/End: Original strand, 3789734 - 3789794
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatt 568  Q
    |||| |||||||||||||||||||||   ||||||||  ||||||||||||||||||||||    
T  3789734 aaattatttagtttgtttggatacaattatataaaagttattttttgttacaaaattaatt 3789794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 448 - 565
Target Start/End: Complemental strand, 10332825 - 10332711
Alignment:
Q  448 atgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga 547  Q
    |||||||||||| |||||||||  ||||||||||| || ||| |||||        |||||||||||| |||||||||||||||||   |||||||| ||    
T  10332825 atgaaaaatcagaatctattttgtgtttgtttaccataataaaaatca--ttttttaaacaaataattcagtttgtttggatacaactatataaaaggga 10332728  T
Q  548 ttttttgttacaaaatta 565  Q
     |||||||||||||||||    
T  10332727 -tttttgttacaaaatta 10332711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 639
Target Start/End: Complemental strand, 47567724 - 47567591
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctccactn 603  Q
    ||||||||||| || ||||||||||||| |   |||||||| |||||||||||||||| |||   || ||| |||||| | ||||||||||||||| ||     
T  47567724 aaacaaataatataatttgtttggatactactatataaaagggattttttgttacaaagtta--gttcaatcttttaagcaatattttctctctcctcta 47567627  T
Q  604 nnnnnnntctattttttctagaaactgctcttaaca 639  Q
           |||||||||| ||||| ||||||||||||    
T  47567626 aaaaaaatctattttttttagaagctgctcttaaca 47567591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 448 - 599
Target Start/End: Complemental strand, 10297350 - 10297201
Alignment:
Q  448 atgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa--acttataaaaga 545  Q
    |||||||||||| ||||||||| ||||||| |||| || ||| |||||        ||||||||||||||||||||||||||||||  |  ||||||||     
T  10297350 atgaaaaatcagaatctattttgcgtttgtataccataataaaaatca-tttttttaaacaaataatttagtttgtttggatacaactatatataaaagg 10297252  T
Q  546 gattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    || ||| |||||||||||||   || ||| |||||||  |||||||||||||||    
T  10297251 ga-tttctgttacaaaatta--gttcaatcttttaaataatattttctctctcc 10297201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 379 - 468
Target Start/End: Original strand, 42583484 - 42583567
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattt 468  Q
    |||||||||  |||||||||||||||||||||| || ||||| |||||||       |||||||||||||| ||||||||| ||||||||    
T  42583484 gtttgttacacattaaaataaaagtgattttgatatgaaatagtttagag------gtttagagattttataaaaaatcagaatctattt 42583567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 384 - 422
Target Start/End: Original strand, 46514887 - 46514925
Alignment:
Q  384 ttacggattaaaataaaagtgattttgacataaaataat 422  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  46514887 ttacggattaaaataaaaatgattttgacataaaataat 46514925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 455
Target Start/End: Complemental strand, 14900532 - 14900475
Alignment:
Q  398 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaa 455  Q
    |||| ||||||||||||   |||||||||||||||| ||||||||| |||||||||||    
T  14900532 aaaaatgattttgacattctataatttagagattattttttagagactttatgaaaaa 14900475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 436 - 485
Target Start/End: Complemental strand, 27245953 - 27245904
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgta 485  Q
    |||||||||||||||||||||||  |||||||||  ||||||||||||||    
T  27245953 tttagagattttatgaaaaatcaaaatctattttgtgtttgtttaccgta 27245904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 599
Target Start/End: Complemental strand, 30498521 - 30498432
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||| ||||||||||||| |||||||   ||||||||||||||| ||||| |||||||   || |||||||| | | |||||||||||||||    
T  30498521 aaatgatttagtttgttttgatacaactatataaaagagattttctgttataaaatta--gttcaatattttgatctatattttctctctcc 30498432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 599
Target Start/End: Original strand, 54142993 - 54143086
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||| ||| ||||| |||||||||| |   |||||||  ||||||||||||||||||||   || ||| |||||||| |||||||||||||||    
T  54142993 aaacaaaaaatctagttagtttggatacgactatataaaatggattttttgttacaaaatta--gttcaattttttaaacaatattttctctctcc 54143086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 510 - 565
Target Start/End: Complemental strand, 1476822 - 1476767
Alignment:
Q  510 ataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||||||| ||||||||||| | ||  | |||||||||||||||||||||||||||    
T  1476822 ataatttaatttgtttggatgctaatatgtaaaagagattttttgttacaaaatta 1476767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 379 - 430
Target Start/End: Complemental strand, 23302124 - 23302073
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagat 430  Q
    ||||||||||||||| ||||||| ||||||||| ||  ||||||||||||||    
T  23302124 gtttgttacggattagaataaaaatgattttgagattcaataatttagagat 23302073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 537 - 595
Target Start/End: Original strand, 30917800 - 30917856
Alignment:
Q  537 tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 595  Q
    |||||||| |||||||||||||||| ||||  ||||||||||| | |||||||||||||    
T  30917800 tataaaagcgattttttgttacaaatttaa--tttaatattttgatccatattttctct 30917856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 641 - 679
Target Start/End: Complemental strand, 3942498 - 3942460
Alignment:
Q  641 tttttagattctgattttattaaaaagcagtaacaaacg 679  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  3942498 tttttagattctgatttttttaaaaagctgtaacaaacg 3942460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 519 - 596
Target Start/End: Original strand, 10317246 - 10317321
Alignment:
Q  519 tttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 596  Q
    ||||||| ||||||||  || ||||||||||||| ||||||||||||   || ||| ||| |||||||||||||||||    
T  10317246 tttgttttgatacaaatataaaaaagagatttttcgttacaaaatta--gttcaatttttaaaaccatattttctctc 10317321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 382 - 428
Target Start/End: Complemental strand, 40459909 - 40459863
Alignment:
Q  382 tgttacggattaaaataaaagtgattttgacataaaataatttagag 428  Q
    |||||| ||||||||||||| ||||||||||||  ||||||||||||    
T  40459909 tgttacagattaaaataaaaatgattttgacattgaataatttagag 40459863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 539 - 569
Target Start/End: Original strand, 43185627 - 43185657
Alignment:
Q  539 taaaagagattttttgttacaaaattaattt 569  Q
    |||||||||||||||||||||||||||||||    
T  43185627 taaaagagattttttgttacaaaattaattt 43185657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 508 - 565
Target Start/End: Complemental strand, 54585917 - 54585859
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaatta 565  Q
    |||||||||||||||||||||||||    |||||||| || ||||||||||||||||||    
T  54585917 aaataatttagtttgtttggatacagctatataaaagcgatttttttgttacaaaatta 54585859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 413
Target Start/End: Complemental strand, 30498646 - 30498613
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgaca 413  Q
    ||||||||| ||||||||||||||||||||||||    
T  30498646 tttgttacgaattaaaataaaagtgattttgaca 30498613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 390 - 459
Target Start/End: Original strand, 52573220 - 52573288
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcag 459  Q
    |||||||||||||||||||||| ||  ||||||||| | ||||| ||||| || |||||| |||||||||    
T  52573220 attaaaataaaagtgattttgatattgaataatttaaaaattat-ttttataggttttataaaaaatcag 52573288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 3e-59; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 379 - 678
Target Start/End: Complemental strand, 7205023 - 7204717
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  7205023 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttacgtttgtt 7204924  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttg-------tttggatacaaacttataaaagagattttttgttacaaaattaattttt 571  Q
    ||||||| ||| ||| |        |||||||| |||| |||||       |||||||||||   |||||||||||||||||||||||||||||   ||     
T  7204923 taccgtaataaaaattaatttttttaaacaaatgattttgtttgtttggaatttggatacaactatataaaagagattttttgttacaaaatta--gttc 7204826  T
Q  572 aatattttaaaccatattttctctctccactnnnnnnnntctattttttctagaaactgctcttaaca--gtttttagattctga-ttttattaaaaagc 668  Q
    ||| ||||||| |||||||| ||||||| ||        ||||||||||  |||| ||||||||||||  ||||||||||||||| |||| ||||||||     
T  7204825 aatcttttaaatcatattttttctctcctctaaaaaaaatctatttttt-gagaagctgctcttaacaatgtttttagattctgattttttttaaaaagt 7204727  T
Q  669 agtaacaaac 678  Q
     |||||||||    
T  7204726 tgtaacaaac 7204717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 21980782 - 21981000
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||  |||||||    
T  21980782 gtttgttacagattaaaatataagttattttgacataaaataatttagagattatagtttagagattttatgaaaaatcaagatctattttgtgtttgtt 21980881  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||||| ||| ||||||       ||||||||||| ||||||||||||||||||   ||||||||  |||||||||||||||||||   || ||| |||    
T  21980882 taccgtaataaaaatcactttttttaaacaaataatgtagtttgtttggatacaactatataaaaggaattttttgttacaaaatta--gttcaatcttt 21980979  T
Q  579 taaaccatattttctctctcc 599  Q
    ||||  |||||||||||||||    
T  21980980 taaaaaatattttctctctcc 21981000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 374 - 598
Target Start/End: Original strand, 33438534 - 33438755
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgt 473  Q
    |||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||| || || |||||| |||    
T  33438534 ggctcgtttgtgacggattaaaataaaagtgattttgacacaaaataattttgagattatattttaaagattttatgaaaaattagaatttattttgcgt 33438633  T
Q  474 ttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaa 573  Q
    ||||||||| || ||| ||||||       ||||||||||||||||||||||| ||||||   ||||||||||| ||||||||| |||||||   || ||    
T  33438634 ttgtttaccataataaaaatcactttttttaaacaaataatttagtttgtttgaatacaactatataaaagaga-tttttgttaaaaaatta--gttcaa 33438730  T
Q  574 tattttaaaccatattttctctctc 598  Q
    | |||||||||||||||||||||||    
T  33438731 tcttttaaaccatattttctctctc 33438755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 397 - 599
Target Start/End: Complemental strand, 2258901 - 2258701
Alignment:
Q  397 taaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcac 496  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||| ||||||||||||||| ||| |||||     
T  2258901 taaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatttgaatctattttgcgtttgtttaccgtaataaaaatcat 2258802  T
Q  497 nnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctc 596  Q
           ||||||||||| |||||||||| |||||||   |||||||||||||||||||||||||||||   || ||| ||||||| |||||||||||||    
T  2258801 ttgttttaaacaaataatctagtttgttttgatacaactatataaaagagattttttgttacaaaatta--gttcaatcttttaaatcatattttctctc 2258704  T
Q  597 tcc 599  Q
    |||    
T  2258703 tcc 2258701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 379 - 597
Target Start/End: Complemental strand, 26001463 - 26001251
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||    |||||||||||||||||||||| || || |||||| ||||||||    
T  26001463 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagat----ttttagagattttatgaaaaattagaatttattttgcgtttgtt 26001368  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    || |||| ||| ||||||       |||||||||||||||||| |||||||||||   ||||||||||||||||||||| |||||||   ||||||||||    
T  26001367 tatcgtaataaaaatcacttattttaaacaaataatttagtttatttggatacaactatataaaagagattttttgttaaaaaatta--gtttaatattt 26001270  T
Q  579 taaaccatattttctctct 597  Q
    | ||  ||||||| |||||    
T  26001269 tgaattatattttgtctct 26001251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 387 - 593
Target Start/End: Complemental strand, 14094265 - 14094064
Alignment:
Q  387 cggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtac 486  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||  ||||||||| ||||     
T  14094265 cggattaaaataaaagtgattttgacataaaataatttagagattat-ttttagagattttaagaaaaatcagaatctattttgtgtttgtttatcgtaa 14094167  T
Q  487 taagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccat 586  Q
    ||| ||||||       ||  ||||||||||||||||||||||||||   |||||||| |||||||||||| ||||||||  |||||| |||| | ||||    
T  14094166 taaaaatcacctttttaaa--aaataatttagtttgtttggatacaactatataaaagcgattttttgttataaaattaa--tttaattttttgatccat 14094071  T
Q  587 attttct 593  Q
    |||||||    
T  14094070 attttct 14094064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 418 - 533
Target Start/End: Complemental strand, 3307522 - 3307407
Alignment:
Q  418 ataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataattta 517  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||  ||||||||| |||| ||| ||||||       ||||||||||||||    
T  3307522 ataatttagagattacattttagagattttatgaaaaatcagaatctattttgtgtttgtttatcgtaataaaaatcactttgttaaaacaaataattta 3307423  T
Q  518 gtttgtttggatacaa 533  Q
    ||||||||||||||||    
T  3307422 gtttgtttggatacaa 3307407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 390 - 480
Target Start/End: Original strand, 21091898 - 21091987
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    ||||||||||| ||||||||| | |||| ||||||||||||||| || |||||||||||||||||||||| ||||||||| ||||||||||    
T  21091898 attaaaataaatgtgattttggcttaaa-taatttagagattattttatagagattttatgaaaaatcagaatctattttgcgtttgttta 21091987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 374 - 533
Target Start/End: Complemental strand, 20469532 - 20469387
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggat-ctattttacg 472  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||               ||||||||||||||||||| | || ||||||| ||    
T  20469532 ggctcgtttgttatggattaaaataaaagtgattttgacataaaataatt---------------agagattttatgaaaaatctgaattctattttgcg 20469448  T
Q  473 tttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 533  Q
    ||||||||||||  ||| ||||||       ||||||||||||||||||||||||||||||    
T  20469447 tttgtttaccgtgataaaaatcactttttttaaacaaataatttagtttgtttggatacaa 20469387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 379 - 433
Target Start/End: Original strand, 24007044 - 24007098
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 433  Q
    ||||||||||||||||||||||| |||||| | ||||||||||||||||||||||    
T  24007044 gtttgttacggattaaaataaaaatgatttggccataaaataatttagagattat 24007098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 390 - 487
Target Start/End: Complemental strand, 20609506 - 20609407
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat--gaaaaatcaggatctattttacgtttgtttaccgtact 487  Q
    |||||||||||| | ||||||||||  ||||||||||  ||||| ||||| |||||||||   ||||||||  ||||||||| |||||||||||||||||    
T  20609506 attaaaataaaaataattttgacattgaataatttagttattattttttaaagattttataaaaaaaatcacaatctattttgcgtttgtttaccgtact 20609407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 382 - 425
Target Start/End: Complemental strand, 891192 - 891149
Alignment:
Q  382 tgttacggattaaaataaaagtgattttgacataaaataattta 425  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  891192 tgttacggattaaaataaaagtgattttcacataaaataattta 891149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 383 - 481
Target Start/End: Complemental strand, 22533662 - 22533563
Alignment:
Q  383 gttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatg-aaaaatcaggatctattttacgtttgtttac 481  Q
    |||||||| |||||||||||| | |||| |||||||||||||| ||||||| || |||||||  |||| |||||| || || |||||| |||||||||||    
T  22533662 gttacggaataaaataaaagttactttgccataaaataatttaaagattattttatagagatgctatgaaaaaattagaatatattttgcgtttgtttac 22533563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 432 - 599
Target Start/End: Original strand, 26209049 - 26209215
Alignment:
Q  432 atattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatac 531  Q
    ||||||||||||||||||||||||| |  ||||||||| | |||||||||| |  ||| ||| |        |||||||||||||| ||||||| |||||    
T  26209049 atattttagagattttatgaaaaattaaaatctattttgcatttgtttaccatgataaaaatta-tttttttaaacaaataatttaatttgtttagatac 26209147  T
Q  532 aa--acttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||  |  |||| ||| ||||||||||||||||||||   ||||||||||||||   ||||||||||||||    
T  26209148 aactatatatataagggattttttgttacaaaatta--gtttaatattttaaattctattttctctctcc 26209215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 432 - 591
Target Start/End: Complemental strand, 10780334 - 10780177
Alignment:
Q  432 atattttagagattttatgaaaaa-tcag-gatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggat 529  Q
    |||||||||||||||| ||||||| |||| ||| ||||||||||||||||||||||  || | ||||       ||| ||||||||||||||||||| ||    
T  10780334 atattttagagattttttgaaaaaatcagagat-tattttacgtttgtttaccgtaacaa-attcacttttttaaaataaataatttagtttgtttgtat 10780237  T
Q  530 acaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatatttt 591  Q
    ||||   ||||||| ||||||||||||| |||| ||   || ||| ||||||||||||||||    
T  10780236 acaactatataaaatagattttttgttagaaaacta--gttcaatcttttaaaccatatttt 10780177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 10780374 - 10780321
Alignment:
Q  378 ggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||| |||||||||||||| | |||||||||||||||| ||||||||||    
T  10780374 ggtttgttatggattaaaataaaaataattttgacataaaatattttagagatt 10780321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 389 - 431
Target Start/End: Original strand, 26209020 - 26209062
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||||||||||||||| |||||||||| ||||||||||    
T  26209020 gattaaaataaaagtgattttcacataaaatattttagagatt 26209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 427 - 529
Target Start/End: Complemental strand, 24007036 - 24006934
Alignment:
Q  427 agattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttg 526  Q
    ||||||| ||||||||||||||| ||||||||| ||||||||  | ||||||||| ||| ||| |||||        ||| ||||||||||||||||| |    
T  24007036 agattattttttagagattttataaaaaatcagaatctatttagcatttgtttactgtaataaaaatcatttttttaaaataaataatttagtttgttag 24006937  T
Q  527 gat 529  Q
    |||    
T  24006936 gat 24006934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 5730236 - 5730197
Alignment:
Q  190 ttgttccatgataagctatttattacaaaatcttgtcaaa 229  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  5730236 ttgttccatgatatgctatttagtacaaaatcttgtcaaa 5730197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 455
Target Start/End: Complemental strand, 8116412 - 8116345
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattt-tagagattttatgaaaaa 455  Q
    |||||||| || ||| ||||||||||  ||||||||||||||||| ||| |||||||||||| |||||    
T  8116412 gattaaaaaaatagtaattttgacattcaataatttagagattatttttctagagattttataaaaaa 8116345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 408 - 455
Target Start/End: Complemental strand, 26277634 - 26277587
Alignment:
Q  408 ttgacataaaataatttagagattatattttagagattttatgaaaaa 455  Q
    |||||||  ||||||||| ||||||| |||||||||||||||||||||    
T  26277634 ttgacattcaataatttaaagattattttttagagattttatgaaaaa 26277587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 395 - 428
Target Start/End: Original strand, 5678842 - 5678875
Alignment:
Q  395 aataaaagtgattttgacataaaataatttagag 428  Q
    ||||||||| ||||||||||||||||||||||||    
T  5678842 aataaaagtaattttgacataaaataatttagag 5678875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 2e-57; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 14787075 - 14787294
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||    
T  14787075 gtttgttactaattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttgtgaaaaatcagaatctattttgcgtttgtt 14787174  T
Q  479 taccgtactaagaatca-cnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatt 577  Q
    ||||||| ||| |||||         ||||||||||| || |||||||||||||||   | ||||||||||||||||||||||||||||  || ||| ||    
T  14787175 taccgtaataaaaatcattttcttttaaacaaataatctaatttgtttggatacaactatctaaaagagattttttgttacaaaattaa--ttcaatctt 14787272  T
Q  578 ttaaaccatattttctctctcc 599  Q
    |||||| |||||||||||||||    
T  14787273 ttaaacaatattttctctctcc 14787294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 380 - 595
Target Start/End: Original strand, 42676341 - 42676554
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttt 479  Q
    |||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||    
T  42676341 tttgttacagaataaaataaaagtgattttgacataaaagaatttagagattatatttttgagattttatgaaaaatcagaatctattttgcgtttgttt 42676440  T
Q  480 accgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatttt 579  Q
    | |||| ||| ||||||       ||||||| ||| ||||||||||| ||||||   |||||||| ||||||||||||||||||||   || ||| ||||    
T  42676441 atcgtaataaaaatcactttttttaaacaaaaaatctagtttgtttgcatacaactatataaaagggattttttgttacaaaatta--gttcaatctttt 42676538  T
Q  580 aaaccatattttctct 595  Q
    ||| ||||||||||||    
T  42676539 aaatcatattttctct 42676554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 21479281 - 21479468
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||  | ||||||||| ||||||||    
T  21479281 gtttgttacggattaaaataaaattgattctgacataaaataatttagagattatattttagagattttaagaaaaatgggaatctattttgcgtttgtt 21479380  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagatttttt-gttacaaaatta 565  Q
    ||||||  ||| ||||||       ||||||||||| ||||||||||||||||||   |||||||| |||||||| ||||||||||||    
T  21479381 taccgtggtaaaaatcactttttgtaaacaaataatctagtttgtttggatacaactatataaaagggattttttcgttacaaaatta 21479468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 379 - 595
Target Start/End: Original strand, 15458820 - 15459035
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||  |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||  |||||||    
T  15458820 gtttgttatagattaaaataaaagtgattttgacattaaataatttagagattattttttagagattttatgaaaaatcagaatctattttgagtttgtt 15458919  T
Q  479 taccgtactaagaatc-acnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatt 577  Q
    ||| ||| | | |||| ||       ||||||||||||| ||||||||||||||||   |||||||| ||||||||||||||||||||   || |||| |    
T  15458920 tactgtaatgaaaatctactttttttaaacaaataatttggtttgtttggatacaactatataaaagtgattttttgttacaaaatta--gttcaatact 15459017  T
Q  578 ttaaaccatattttctct 595  Q
    | ||||||||||||||||    
T  15459018 taaaaccatattttctct 15459035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 379 - 525
Target Start/End: Original strand, 31667387 - 31667533
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  31667387 gtttgttaaggattaaaataaaagtgatttcgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 31667486  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgttt 525  Q
    ||||||  ||| ||||||       ||||||||||||||||||||||    
T  31667487 taccgtgataaaaatcactttttttaaacaaataatttagtttgttt 31667533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 374 - 482
Target Start/End: Complemental strand, 24545854 - 24545746
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgt 473  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||    
T  24545854 ggctcgtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcagaatctattttgcgt 24545755  T
Q  474 ttgtttacc 482  Q
    |||||||||    
T  24545754 ttgtttacc 24545746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 379 - 598
Target Start/End: Original strand, 9420132 - 9420350
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattata-ttttagagattttatgaaaaatcaggatctattttacgtttgt 477  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  |||||||| ||||||||||||||||||||||||| ||||||||| ||||| |    
T  9420132 gtttgttacggattaaaataaaagtgattttgacattaaataatttgaagattatatttttagagattttatgaaaaatcagaatctatttttcgttt-t 9420230  T
Q  478 ttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga-ttttttgttacaaaattaatttttaatat 576  Q
    |||||| | ||| ||||||       ||| ||||| |||| |||||||||||||||   |||||||  || ||||||||||||||||||   ||||||||    
T  9420231 ttaccgcaataaaaatcactttttttaaataaatattttaatttgtttggatacaactatataaaatggatttttttgttacaaaatta--gtttaatat 9420328  T
Q  577 tttaaaccatattttctctctc 598  Q
    |||||||||||||| |||||||    
T  9420329 tttaaaccatatttcctctctc 9420350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 379 - 481
Target Start/End: Complemental strand, 34454102 - 34454000
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||    
T  34454102 gtttgttacggattaaaataaaagtgattttaacataaaataatttagagattatattttagagattttatgaaagatcagaatctattttgcatttgtt 34454003  T
Q  479 tac 481  Q
    |||    
T  34454002 tac 34454000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 374 - 591
Target Start/End: Complemental strand, 36950553 - 36950336
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgt 473  Q
    |||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| || || |||||| |||    
T  36950553 ggctcgttagttacagattaaaataaaagtgattttgacataaaataatttagagattatattttaaagattttatgaaaaattagaatttattttgcgt 36950454  T
Q  474 ttgtttaccgtactaagaatc--acnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaattttt 571  Q
    || ||||||||| ||| ||||           ||||||| ||| |||||||||||||| |||   |||||||  ||||||||||||||||||||   |||    
T  36950453 ttttttaccgtaataaaaatctttttttttttaaacaaacaatctagtttgtttggattcaactatataaaatggattttttgttacaaaatta--gttt 36950356  T
Q  572 aatattttaaaccatatttt 591  Q
    ||| |||||||| |||||||    
T  36950355 aattttttaaacaatatttt 36950336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 379 - 532
Target Start/End: Original strand, 37201527 - 37201679
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||  |||||||||  |||||||    
T  37201527 gttttttacggattaaa-taaaagtgattttgacataaaataatttagagattattttttggagattttgtgaaaaatcacaatctattttgtgtttgtt 37201625  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggataca 532  Q
    |||| || ||||||||||       |||  ||||||||||||||||||||||||    
T  37201626 taccttaataagaatcactttttaaaaaataataatttagtttgtttggataca 37201679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 38722726 - 38722908
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    || |    
T  38722726 gtttattacggattaaaataaaaatgattttgatataaaataatttagagattatattttagagattttatgaaaaatcaaaatctattttag---tgat 38722822  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||   ||  |||||||||       ||| ||||||||||||||||||| ||||||   ||||||| ||||||||| |||||||||||    
T  38722823 taaaataa-aagaatcactttttttaaataaataatttagtttgtttgaatacaactatataaaatagattttttattacaaaatta 38722908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 402 - 599
Target Start/End: Original strand, 3255999 - 3256197
Alignment:
Q  402 gtgattttgacataaaataatttagagattatattttagagattttatg-aaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnn 500  Q
    |||||||| ||||| ||||||||| ||||||| |||||||||||||||| ||||||||| |||| ||||  |||||||||||||| ||| ||||||        
T  3255999 gtgattttaacatagaataatttatagattattttttagagattttatgaaaaaatcagaatctcttttttgtttgtttaccgtaataaaaatcactttt 3256098  T
Q  501 nnnaaacaaataatttagtttgtttggatacaaacttataaaagaga--ttttttgttacaaaattaatttttaatattttaaaccatattttctctctc 598  Q
       ||||||||||||||||||||||| ||||||   |||||||||||  |||||||||| ||||||    || ||| ||||||| |||||||||||||||    
T  3256099 tttaaacaaataatttagtttgtttgtatacaactatataaaagagattttttttgttaaaaaatt--ggttcaatcttttaaatcatattttctctctc 3256196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 40662953 - 40662750
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||              |||||||||||||| |||||||||  |||||||    
T  40662953 gtttgttacggattagaataaaagtgattttgacataaaatagtttagagatt--------------ttatgaaaaatcagaatctattttgtgtttgtt 40662868  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||| ||| ||| ||||||       ||| ||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||   || ||| |||    
T  40662867 tacagtaataaaaatcactttttt-aaataaataatttagtttgtttggatacaactatataaaagggattttttgttacaaaatta--gttcaattttt 40662771  T
Q  579 taaaccatattttctctctcc 599  Q
    |||| ||||||||||||||||    
T  40662770 taaatcatattttctctctcc 40662750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 30620480 - 30620566
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatcta 465  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  30620480 gtttgttacagattaaaataaatgtgattttcacataaaataatttagagattatattttagagattttgtgaaaaatcagaatcta 30620566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 379 - 465
Target Start/End: Original strand, 30623101 - 30623187
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatcta 465  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  30623101 gtttgttacagattaaaataaatgtgattttcacataaaataatttagagattatattttagagattttgtgaaaaatcagaatcta 30623187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 379 - 564
Target Start/End: Original strand, 7495474 - 7495644
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||||||||||||||||||||||||||||              |||||| ||||||| ||||||||| |||||||| |||||||||    
T  7495474 gtttgttacggattaaaataaaagtgattttgacataaaataa--------------tttagatattttataaaaaatcagaatctatttaacgtttgtt 7495559  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatt 564  Q
     |||||| ||| ||||||       ||||||||||| ||||||||||||||||||   |||||||| |||||||||||||||||||    
T  7495560 aaccgtaataaaaatcac-ttttttaaacaaataatctagtttgtttggatacaactatataaaagggattttttgttacaaaatt 7495644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 379 - 470
Target Start/End: Original strand, 11667078 - 11667169
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctatttta 470  Q
    |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| || ||| |||||||||||||||||| ||||||||||    
T  11667078 gtttgttacgaattaaaataaaagtgattttgtcataaaataatttagatattattttgtagtgattttatgaaaaatcagaatctatttta 11667169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 43004795 - 43004857
Alignment:
Q  387 cggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  43004795 cggattaaaataaaagtgattttgacataaaataatttagagattatattttagatattttat 43004857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 21479091 - 21479148
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21479091 ggctcgtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 21479148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 43968394 - 43968330
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt 445  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  43968394 tttgttacggattaaaataaaagt-attttgacataaaataatttagagattattttttagagatt 43968330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 379 - 596
Target Start/End: Complemental strand, 43968763 - 43968562
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||              |||||| | ||||||||| ||||||||| ||||||||    
T  43968763 gtttgctacggattaaaataaaagtgattttcacataaaataatttaga--------------gattttgtaaaaaatcagaatctattttgcgtttgtt 43968678  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    |||||   ||| |||||        ||||||||||| |||| || ||||||||||   |||||||| ||||||||||||||||||||   || ||| |||    
T  43968677 taccgcgataaaaatcattttttttaaacaaataatctagtgtgcttggatacaactatataaaagggattttttgttacaaaatta--gttcaatcttt 43968580  T
Q  579 taaaccatattttctctc 596  Q
    |||| |||||||||||||    
T  43968579 taaatcatattttctctc 43968562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 374 - 435
Target Start/End: Complemental strand, 41347511 - 41347450
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatat 435  Q
    |||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  41347511 ggctcgtttgttacggattaaaataaaagtcattttgacattaaataatttagagattatat 41347450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 465
Target Start/End: Original strand, 30632162 - 30632216
Alignment:
Q  411 acataaaataatttagagattatattttagagattttatgaaaaatcaggatcta 465  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  30632162 acataaaataatttagagattatattttagagattttgtgaaaaatcagaatcta 30632216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 508 - 597
Target Start/End: Complemental strand, 43968297 - 43968210
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctct 597  Q
    ||||||||||||||||||||||||||   |||||||||||||||||||||||||||||   || ||| |||||| || ||||||||||||    
T  43968297 aaataatttagtttgtttggatacaacgatataaaagagattttttgttacaaaatta--gttcaatcttttaacccttattttctctct 43968210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 436 - 593
Target Start/End: Complemental strand, 7075052 - 7074897
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    ||||||||||||||||||||| |  || ||||||  |||||||||||||| ||| ||||||       |||||| |||||||||||||| ||||||||      
T  7075052 tttagagattttatgaaaaattataatttattttgagtttgtttaccgtaataaaaatcactttttttaaacaattaatttagtttgttaggatacaact 7074953  T
Q  536 ttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttct 593  Q
     |||||||  ||||||||| ||||||||||   || ||| ||||||| ||||||||||    
T  7074952 atataaaaatgattttttgatacaaaatta--gttaaattttttaaatcatattttct 7074897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 379 - 480
Target Start/End: Original strand, 9977794 - 9977899
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatta----tattttagagattttatgaaaaatcaggatctattttacgtt 474  Q
    ||||||| | |||||||||||||||||||||||| | |||||||||||||||||    | ||||||||||||||  ||||||||  ||||||||| ||||    
T  9977794 gtttgttgcagattaaaataaaagtgattttgacgttaaataatttagagattattttttttttagagattttacaaaaaatcaaaatctattttgcgtt 9977893  T
Q  475 tgttta 480  Q
     |||||    
T  9977894 agttta 9977899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 379 - 458
Target Start/End: Complemental strand, 18297107 - 18297028
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgaca-taaaataatttagagattatattttagagattttatgaaaaatca 458  Q
    |||| |||| ||||||||||||| ||||||| ||| |||||||||||||||||||| || |||||||||||||||||||||    
T  18297107 gtttattacagattaaaataaaaatgatttt-acagtaaaataatttagagattatcttatagagattttatgaaaaatca 18297028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 516 - 595
Target Start/End: Original strand, 30632215 - 30632292
Alignment:
Q  516 tagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctct 595  Q
    ||||||||||||||||||   ||||||||||||||||||||||||||||||  || ||| ||||||| ||||||||||||    
T  30632215 tagtttgtttggatacaactatataaaagagattttttgttacaaaattaa--ttcaatcttttaaatcatattttctct 30632292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 30668785 - 30668837
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||||||    
T  30668785 gttttttacggattaaaataaaagtgattttcacataaaataatttagagatt 30668837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 39844414 - 39844362
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  39844414 gtttgttacggattaaaatataagtggttttgacataaaataatttagagatt 39844362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 30666203 - 30666254
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  30666203 tttgttacagattaaaataaaagtgattttcacataaaataatttagagatt 30666254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 379 - 429
Target Start/End: Complemental strand, 645420 - 645370
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagaga 429  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||    
T  645420 gtttattatggattaaaataaaagtgattttgacataaaataatttagaga 645370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 379 - 424
Target Start/End: Complemental strand, 40663027 - 40662982
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataattt 424  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  40663027 gtttgttacggattagaataaaagtgattttgacataaaataattt 40662982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 447
Target Start/End: Original strand, 34453627 - 34453695
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatttt 447  Q
    |||||||||| ||||||||||||||||||||   ||||||||||||||||| ||| || ||||||||||    
T  34453627 gtttgttacgtattaaaataaaagtgattttattataaaataatttagagactattttatagagatttt 34453695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 516 - 598
Target Start/End: Original strand, 30666273 - 30666353
Alignment:
Q  516 tagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 598  Q
    ||||||||||| |||||||  |||||||| |||||||||||||||||||  | || ||| ||||||| |||||||||||||||    
T  30666273 tagtttgtttgaatacaaatatataaaagggattttttgttacaaaatt--tgttcaatcttttaaatcatattttctctctc 30666353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 379 - 433
Target Start/End: Complemental strand, 27719863 - 27719809
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 433  Q
    |||||| |||||||||||||||||||| |||||||| |||||||||| |||||||    
T  27719863 gtttgtcacggattaaaataaaagtgaatttgacattaaataatttaaagattat 27719809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 431
Target Start/End: Complemental strand, 44833346 - 44833304
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||||||||||||||| ||||||||||||||||    
T  44833346 gattaaaataaaagtgattttgacatgaaataatttagagatt 44833304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 374 - 431
Target Start/End: Complemental strand, 7075100 - 7075043
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||| |||| ||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  7075100 ggctcgtttattatggattaaaataaaaatgattttggcataaaataatttagagatt 7075043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 599
Target Start/End: Complemental strand, 39844302 - 39844212
Alignment:
Q  507 caaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||||||| ||||||||||||||||||   |||||||| |||||| |||||||||||||   || ||| | |||||| |||||||||||||||    
T  39844302 caaataatctagtttgtttggatacaactatataaaagggattttctgttacaaaatta--gttcaatctattaaacaatattttctctctcc 39844212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 516 - 598
Target Start/End: Original strand, 34454177 - 34454257
Alignment:
Q  516 tagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 598  Q
    |||||||||||||||||    |||||||| |||||||| ||||||||||||  ||||||||||| |  |||||||||||||||    
T  34454177 tagtttgtttggatacatctatataaaagcgattttttcttacaaaattaa--tttaatattttgattcatattttctctctc 34454257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 426 - 485
Target Start/End: Complemental strand, 42679591 - 42679532
Alignment:
Q  426 gagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgta 485  Q
    |||||||||||||||||||||| |||||||| |  || ||||||| ||||||||||||||    
T  42679591 gagattatattttagagattttgtgaaaaattaaaatttattttatgtttgtttaccgta 42679532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 422 - 565
Target Start/End: Original strand, 1826675 - 1826817
Alignment:
Q  422 tttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagttt 521  Q
    |||||||||||| ||||| | ||||||||||||||||| || ||||||  |||||||||  ||| ||| ||||||       ||| | |||||||| |||    
T  1826675 tttagagattattttttaaaaattttatgaaaaatcagaatttattttgtgtttgtttaaggtaataaaaatcactttttttaaa-agataatttaattt 1826773  T
Q  522 gtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||||||| ||    |||||||| |||||||| |||||||||||    
T  1826774 gtttggatccagctatataaaagcgattttttattacaaaatta 1826817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 510 - 599
Target Start/End: Original strand, 20612700 - 20612787
Alignment:
Q  510 ataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||| |||||| ||| |||||||   |||||||| ||||||||||| ||||||||   |||||| |||||||||||||||| |||||||    
T  20612700 ataatctagtttatttagatacaactatataaaagggattttttgtttcaaaatta--gtttaatcttttaaaccatattttttctctcc 20612787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 508 - 565
Target Start/End: Original strand, 3196995 - 3197052
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    |||||||||||||||||| ||||||    |||||||| ||||||||||||||||||||    
T  3196995 aaataatttagtttgttttgatacagctatataaaagtgattttttgttacaaaatta 3197052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 565
Target Start/End: Original strand, 21479209 - 21479270
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||||||| ||||||||||||||||||    |||||||  |||||||||||||||||||    
T  21479209 aaacaaataatctagtttgtttggatacaactacataaaaggcattttttgttacaaaatta 21479270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 379 - 424
Target Start/End: Complemental strand, 40663099 - 40663055
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataattt 424  Q
    ||||||||||||| |||||||||||||||||||||| |||||||||    
T  40663099 gtttgttacggat-aaaataaaagtgattttgacattaaataattt 40663055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 447 - 525
Target Start/End: Complemental strand, 41347452 - 41347374
Alignment:
Q  447 tatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgttt 525  Q
    ||||||||||||| ||||||||| ||||||||||||||  ||| ||||||       ||||| ||||||||||||||||    
T  41347452 tatgaaaaatcagaatctattttgcgtttgtttaccgtgataaaaatcacattttttaaacatataatttagtttgttt 41347374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 407 - 455
Target Start/End: Original strand, 559415 - 559463
Alignment:
Q  407 tttgacataaaataatttagagattatattttagagattttatgaaaaa 455  Q
    ||||||||  ||||||||||||||||| ||||||||| |||||||||||    
T  559415 tttgacattcaataatttagagattattttttagagactttatgaaaaa 559463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 516 - 599
Target Start/End: Original strand, 30668856 - 30668937
Alignment:
Q  516 tagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||||||||||||   ||||||   ||||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  30668856 tagtttgtttggatacaattatataaacatgattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 30668937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 240
Target Start/End: Original strand, 28804329 - 28804404
Alignment:
Q  165 atagcagaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggctata 240  Q
    ||||||||||||||| |||| | ||||||| ||  |||||||||||| |||||| | |||||||| | ||||||||    
T  28804329 atagcagaatttgaacaaatcgctattgtttcagaataagctatttagtacaaagtattgtcaaataacggctata 28804404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 379 - 409
Target Start/End: Complemental strand, 932797 - 932767
Alignment:
Q  379 gtttgttacggattaaaataaaagtgatttt 409  Q
    |||||||||||||||||||||||||||||||    
T  932797 gtttgttacggattaaaataaaagtgatttt 932767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 1e-55; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 366 - 599
Target Start/End: Complemental strand, 44434914 - 44434682
Alignment:
Q  366 agattaaaggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatcta 465  Q
    ||||||| |||| |||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||    
T  44434914 agattaagggctagtttgttacatattaaaataaaagtgattttgacataaaataatatagagattatattttagagattttatgaaaaattagaatcta 44434815  T
Q  466 ttttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagat-tttttgttacaaaatt 564  Q
    ||||  |||||||||||||| ||| ||||||       ||||||||||||||||||||||||||||||   |||||||||||| |||||| ||||||| |    
T  44434814 ttttgtgtttgtttaccgtaataaaaatcacttttttaaaacaaataatttagtttgtttggatacaactatataaaagagatatttttgatacaaaact 44434715  T
Q  565 aatttttaatattttaaaccatattttctctctcc 599  Q
    |  ||| ||| ||||||  |||| |||||||||||    
T  44434714 a--tttcaatcttttaattcataatttctctctcc 44434682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 374 - 565
Target Start/End: Original strand, 24689209 - 24689401
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgt 473  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||| |||    
T  24689209 ggcttgtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttctgaaaaatcagaatttattttgcgt 24689308  T
Q  474 ttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga--ttttttgttacaaaatta 565  Q
    ||| ||||| || ||| ||||||       ||||||||||| ||||||||||||||||||   |||||||||||  ||||||||||||||||||    
T  24689309 ttgcttaccctaataaaaatcac-ttttttaaacaaataatctagtttgtttggatacaactatataaaagagattttttttgttacaaaatta 24689401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 379 - 597
Target Start/End: Complemental strand, 33858216 - 33857999
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatta-tattttagagattttatgaaaaatcaggatctattttacgtttgt 477  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| || |||||| | |||||    
T  33858216 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagattatttttttagagattttatgaaaaatcagaatttattttgcctttgt 33858117  T
Q  478 ttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatatt 577  Q
    ||| |||| ||| ||||||       ||||||||||||| |||| |||||||||||   ||||||||||||||||||||| |||||||   |||||| ||    
T  33858116 ttatcgtaataaaaatcacttattttaaacaaataattttgtttatttggatacaactatataaaagagattttttgttaaaaaatta--gtttaatctt 33858019  T
Q  578 ttaaaccatattttctctct 597  Q
    || || |||||||| |||||    
T  33858018 ttgaatcatattttatctct 33857999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 21697010 - 21696825
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||| |||||||||| ||||||| ||||||||| ||| |||||||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  21697010 gtttgttacggactaaaataaaattgattttcacataaaatcattaagagattatattttagagatttaataaaaaatcagaatctattttacgtttgtt 21696911  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||  | ||| ||||||       |||||||||||||| ||||||| |||||||   |||||||||||||||||||||||||||||    
T  21696910 taccacaataaaaatcactttttttaaacaaataatttactttgttt-gatacaactatataaaagagattttttgttacaaaatta 21696825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 418 - 599
Target Start/End: Complemental strand, 26246807 - 26246628
Alignment:
Q  418 ataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataattta 517  Q
    |||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||| || ||| || |||       ||||||||||| ||    
T  26246807 ataatttagagattatattttagagattttataaaaaatcagaatctattttgcgtttgtttaccataataaaaaacactttttgtaaacaaataatcta 26246708  T
Q  518 gtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
     |||||||||||||||  ||||||||||||||||||||||||||||||   |||||| ||||||||| ||||||||||||||    
T  26246707 atttgtttggatacaactttataaaagagattttttgttacaaaatta--gtttaatcttttaaaccctattttctctctcc 26246628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 1644408 - 1644593
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||| ||||||||    
T  1644408 gtttgttacggattaaaataaaagtgattttgacataaaataatttaaagattatattttagagattttatgaaaaatcataatctattttgcgtttgtt 1644507  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    | ||||   || ||||||       ||||||||||| ||||||||||  ||||||   |||||  | ||||||||||||||||||||    
T  1644508 tcccgtgaaaaaaatcac-ctttttaaacaaataatctagtttgttttaatacaactatataattgggattttttgttacaaaatta 1644593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 380 - 599
Target Start/End: Original strand, 26970594 - 26970814
Alignment:
Q  380 tttgttacggattaaaataaaagtgattt-tgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||  |||||||    
T  26970594 tttgttacggattaaaataaaagtgatttattacataaaataatttagagattatattttagagattttatgataaatcagaatctattttgtgtttgtt 26970693  T
Q  479 taccgtact--aagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatat 576  Q
    || |||| |  || || |||       ||||||||||| |||||||  |||||||||   |||||||| || |||||||||||||||||   || ||| |    
T  26970694 tatcgtaataaaaaaaacactttttttaaacaaataatctagtttgcatggatacaattatataaaagggactttttgttacaaaatta--gttcaatct 26970791  T
Q  577 tttaaaccatattttctctctcc 599  Q
    ||||||| |||||||||||||||    
T  26970792 tttaaacaatattttctctctcc 26970814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 379 - 595
Target Start/End: Complemental strand, 23809152 - 23808938
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| |  |||||||    |||||||    
T  23809152 gtttcttacagattaaaataaaagttattttgacataaaataatttatagattatattttagagattttatgaataattataatctattcagtgtttgtt 23809053  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    ||||| | ||| ||||||       ||||||||||||||||||  ||||||||||   |||||||| ||||||| |||||||||||||||    || |||    
T  23809052 taccgcaataaaaatcaccttttttaaacaaataatttagtttagttggatacaactatataaaagggatttttcgttacaaaattaattag--attttt 23808955  T
Q  579 taaaccatattttctct 595  Q
    |||||||||||||||||    
T  23808954 taaaccatattttctct 23808938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 15640242 - 15640345
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| ||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  15640242 gtttgttacagattaaaataaaagtgattttcacgtaaaataaattagagattatattttagagattttatgaaaaatcagaatctattttgcgtttgtt 15640341  T
Q  479 tacc 482  Q
    ||||    
T  15640342 tacc 15640345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 379 - 599
Target Start/End: Original strand, 35526354 - 35526572
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| || |||||    
T  35526354 gtttgtttcggattaaaataaaagtgattta-acataaaataatttagagattatattttagagattttatgaaaaatcagaatctaatttgcgattgtt 35526452  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagaga---ttttttgttacaaaattaatttttaata 575  Q
     || ||  ||| ||  ||       ||||||||||||||||||||||||||||||   |||||||| ||   ||||||||||||||||||   ||||||     
T  35526453 gactgtgataaaaa--acattttttaaacaaataatttagtttgtttggatacaactatataaaagggatttttttttgttacaaaatta--gtttaatc 35526548  T
Q  576 ttttaaaccatattttctctctcc 599  Q
    |||||||  |||||||||| ||||    
T  35526549 ttttaaattatattttctcgctcc 35526572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 379 - 458
Target Start/End: Complemental strand, 47222726 - 47222647
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatca 458  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  47222726 gtttgttacggattaaaataaaagtgattttcacataaaataatttagagattatattttagagattttatgaaaaatca 47222647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 379 - 565
Target Start/End: Original strand, 4399534 - 4399720
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||||||||  |||| |||||||||||||||||||| |||||||||  | |||||    
T  4399534 gtttgttacggattaaaacaaaagtgattttgatataaaataatttagagattaattttttgagattttatgaaaaatcagaatctattttgtg-ttgtt 4399632  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaag-agattttttgttacaaaatta 565  Q
    || | || ||| ||||||       ||| ||||||||||||||||||||||||||   |||||||| |  |||||| |||||||||||    
T  4399633 tatcttaataaaaatcactttttctaaaaaaataatttagtttgtttggatacaactatataaaagcaattttttttttacaaaatta 4399720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 427 - 565
Target Start/End: Complemental strand, 5801215 - 5801076
Alignment:
Q  427 agattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttg 526  Q
    |||||||||||||||||||||||||||||| || |||||||||  |||||||||||||| ||| ||||||       |||||||||||||||||||||||    
T  5801215 agattatattttagagattttatgaaaaattagaatctattttgtgtttgtttaccgtaataaaaatcactttttttaaacaaataatttagtttgtttg 5801116  T
Q  527 gatacaaacttataaaagaga-ttttttgttacaaaatta 565  Q
    |||||||   ||||||||||| ||||||||||||||||||    
T  5801115 gatacaactatataaaagagatttttttgttacaaaatta 5801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 30122122 - 30121918
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||              |||||||||||||| |||||||||  |||||||    
T  30122122 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt--------------ttatgaaaaatcagaatctattttgtgtttgtt 30122037  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    |||| || ||| ||||||       ||||||||||||||||||||||||||||||   |||||||   |||||||||||||||||||   || ||| |||    
T  30122036 taccataataaaaatcactttgttaaaacaaataatttagtttgtttggatacaactatataaaaagaattttttgttacaaaatta--gttcaatcttt 30121939  T
Q  579 taaaccatattttctctctcc 599  Q
    ||| |||||||||||| ||||    
T  30121938 taatccatattttctccctcc 30121918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 379 - 479
Target Start/End: Complemental strand, 15641211 - 15641111
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||  |||||||    
T  15641211 gtttgttacagtttaaaataaaagtgattttgacatcaaataatttagagattattttctagagattttatgaaaaatcagaatctattttgtgtttgtt 15641112  T
Q  479 t 479  Q
    |    
T  15641111 t 15641111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 389 - 553
Target Start/End: Complemental strand, 45447787 - 45447624
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtacta 488  Q
    ||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||  ||| |||||  ||||||||||| |  ||    
T  45447787 gattaaaataaaagtgattttaacataaaataatctagagattatattttagtgattttatgaaaaatcaaaatccattttgtgtttgtttaccattata 45447688  T
Q  489 agaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagatttttt 553  Q
    | |||||        ||||||||||| ||||||||||||||||||    ||||||||||||||||    
T  45447687 aaaatca-tttttttaaacaaataatatagtttgtttggatacaactaaataaaagagatttttt 45447624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 379 - 496
Target Start/End: Original strand, 28974816 - 28974933
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||| | |||||||||||||| |||||||||||||| |||||||||||||||||||||  || |||||||||  |||||||    
T  28974816 gtttgttacggattaaaataaaattcattttgacataaaacaatttagagattattttttagagattttatgaaaaactagaatctattttgtgtttgtt 28974915  T
Q  479 taccgtactaagaatcac 496  Q
    | || || ||| ||||||    
T  28974916 ttccataataaaaatcac 28974933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 431 - 599
Target Start/End: Complemental strand, 24688954 - 24688788
Alignment:
Q  431 tatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggata 530  Q
    ||||||||||||||||||| |||||| || ||||||||| ||||||||||||||  ||| ||||||       ||||||||||||||||||||| | |||    
T  24688954 tatattttagagattttataaaaaattagaatctattttgcgtttgtttaccgtgataaaaatcactttttttaaacaaataatttagtttgttcgaata 24688855  T
Q  531 caaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||   |||||||  ||||||||||||| ||||||   || ||| ||||||||||||||||||||||||    
T  24688854 caactatataaaaatgattttttgttaccaaatta--gttcaatcttttaaaccatattttctctctcc 24688788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 388 - 560
Target Start/End: Complemental strand, 14312667 - 14312497
Alignment:
Q  388 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtact 487  Q
    |||||||||||||||||||||| | ||||| ||||||||||||||| ||||||||||||||| |||||| || ||||||||| ||||||||||||| | |    
T  14312667 ggattaaaataaaagtgatttttatataaa-taatttagagattattttttagagattttattaaaaataagaatctattttgcgtttgtttaccgcaat 14312569  T
Q  488 aagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaa 560  Q
    || ||| |        |||||||||||||| ||||||| |||||||   |||||||  |||||||||||||||    
T  14312568 aaaaatta-ttttttaaaacaaataatttaatttgtttagatacaactatataaaaaggattttttgttacaa 14312497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 379 - 482
Target Start/End: Original strand, 29102551 - 29102654
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||| | | ||||||||  |||||||||  |||||||    
T  29102551 gtttgttacggattaaaataaaattgattttgacataaaataatttagagattatttttcagagattctttaaaaaatcaaaatctattttttgtttgtt 29102650  T
Q  479 tacc 482  Q
    ||||    
T  29102651 tacc 29102654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 10282685 - 10282513
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||              |||||||||||||| ||||||||| ||||||||    
T  10282685 gtttgttacagattaaaataaaagtgattttgacataaaataatttagagatt--------------ttatgaaaaatcagaatctatttttcgtttgtt 10282600  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    || |||| ||| ||||||       ||||||||||| |||||||||||||||| |   ||||||||  ||||||||| |||||||||    
T  10282599 tatcgtaataaaaatcactatttttaaacaaataatctagtttgtttggatactactatataaaaggtattttttgtaacaaaatta 10282513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 379 - 445
Target Start/End: Original strand, 22644703 - 22644769
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagatt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  22644703 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagatt 22644769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 379 - 565
Target Start/End: Complemental strand, 24162379 - 24162207
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||              |||||||||||||| ||||||||| | ||||||    
T  24162379 gtttgttacatattaaaataaaagtgattttgacataaaataatttagagatt--------------ttatgaaaaatcagaatctattttgcatttgtt 24162294  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||| ||| ||| ||       ||||||||||| |||||||||||||| ||    |||||||||||||||||||||||||||||    
T  24162293 taccgtaataaaaataactttttttaaacaaataatctagtttgtttggatgcatctatataaaagagattttttgttacaaaatta 24162207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 385 - 494
Target Start/End: Complemental strand, 37986206 - 37986099
Alignment:
Q  385 tacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgt 484  Q
    |||||||||||||||  |||||||||||||  ||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| |||||| |||||||    
T  37986206 tacggattaaaataa--gtgattttgacattgaataatttagagattattttttagagattttataaaaaatcagaatctattttgcgtttgcttaccgt 37986109  T
Q  485 actaagaatc 494  Q
    | ||| ||||    
T  37986108 aataaaaatc 37986099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 389 - 480
Target Start/End: Complemental strand, 10282888 - 10282797
Alignment:
Q  389 gattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    ||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||  ||||||||  ||||||||| ||||||||||    
T  10282888 gattaaaataaaagtgattttgacattgaataatttagagattattttttagagattttagaaaaaatcacaatctattttgcgtttgttta 10282797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 379 - 458
Target Start/End: Original strand, 30122259 - 30122338
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatca 458  Q
    ||||||||| ||||||||||||||| ||||||||||||||| ||||||| ||||| |||||| |||||||||||||||||    
T  30122259 gtttgttacagattaaaataaaagtaattttgacataaaatcatttagaaattattttttagggattttatgaaaaatca 30122338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 384 - 458
Target Start/End: Original strand, 19611022 - 19611095
Alignment:
Q  384 ttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatca 458  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||| || |||||||||||||||||||||    
T  19611022 ttacggattaaaataaa-gtggttttgacataaaataatttagagattattttatagagattttatgaaaaatca 19611095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 379 - 599
Target Start/End: Complemental strand, 23640960 - 23640757
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||              ||||||||| |||| |||||||||  | |||||    
T  23640960 gtttgttgcagattaaaataaaagtgattttgacataaaataatttagagatt--------------ttatgaaaa-tcagaatctattttgtgcttgtt 23640876  T
Q  479 taccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattt 578  Q
    |||| || ||| ||||||       |||||||||||||| |||| ||||||||||   ||||||||||||||||| |||||||||||   || ||| |||    
T  23640875 taccataataaaaatcacttttttaaaacaaataatttaatttggttggatacaactctataaaagagatttttttttacaaaatta--gttcaatcttt 23640778  T
Q  579 taaaccatattttctctctcc 599  Q
    ||| | |||||||||||||||    
T  23640777 taatctatattttctctctcc 23640757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 35223674 - 35223726
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35223674 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 35223726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 504 - 599
Target Start/End: Original strand, 38319943 - 38320036
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||||| ||||||||||||||||||   |||||||||||||||||||||||||||||   || ||| |||||||||||||||||| |||||    
T  38319943 aaacaaataatctagtttgtttggatacaactatataaaagagattttttgttacaaaatta--gttcaatcttttaaaccatattttctatctcc 38320036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 379 - 466
Target Start/End: Complemental strand, 26178247 - 26178160
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctat 466  Q
    |||||||| |||||||||||||||| ||||| || |||||| ||||| ||||||| |||||||||||||||||||||| || ||||||    
T  26178247 gtttgttatggattaaaataaaagtcattttcacgtaaaattatttatagattattttttagagattttatgaaaaatgagaatctat 26178160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 388 - 480
Target Start/End: Original strand, 12216852 - 12216945
Alignment:
Q  388 ggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttat-gaaaaatcaggatctattttacgtttgttta 480  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| |||||||||||||||  ||||||||| || |||||| | ||||||||    
T  12216852 ggattaaaataaaagtgattttgatattgaataatttagagattatgttttagagattttataaaaaaatcagaatttattttgcatttgttta 12216945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 24689711 - 24689614
Alignment:
Q  421 atttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttag 518  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  ||| ||| ||||||       |||||||||||||||    
T  24689711 attttgagattatattttagagattttatgaaaaatcagaatctattttacgtttatttattgtaataaaaatcacttttttaaaacaaataatttag 24689614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 380 - 480
Target Start/End: Complemental strand, 26127935 - 26127835
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttt 479  Q
    ||||||| |||||||||||||| |  |||| | ||||||| ||||||||||||  ||||||||||||||| ||||||||| |||||||||  ||||||||    
T  26127935 tttgttatggattaaaataaaaatagttttcatataaaattatttagagattaatttttagagattttataaaaaatcagaatctattttgtgtttgttt 26127836  T
Q  480 a 480  Q
    |    
T  26127835 a 26127835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 379 - 433
Target Start/End: Original strand, 15640424 - 15640478
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 433  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    
T  15640424 gtttgttacagattaaaataaaagtgattttgacataaaataatttatagattat 15640478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 387 - 480
Target Start/End: Original strand, 10282986 - 10283079
Alignment:
Q  387 cggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgttta 480  Q
    ||||||||||||||||||||||| ||||  ||||||||| | ||||| ||||||||||| ||| ||||||||  ||||||||| ||||| ||||    
T  10282986 cggattaaaataaaagtgattttcacattgaataatttataaattattttttagagattatataaaaaatcacaatctattttgcgttttttta 10283079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 374 - 431
Target Start/End: Original strand, 11485838 - 11485895
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  11485838 ggctcgtttgttaaggattaaaataaaagtgattttgacataaattaatttagagatt 11485895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 504 - 599
Target Start/End: Complemental strand, 47222633 - 47222539
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaa-gagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||||||||||||| |||||||||||| ||   ||||||| ||||||||||||||||||||||   || ||| ||||||||||||||||||||||||    
T  47222633 aaacaaataatttaatttgtttggatataactatataaaaagagattttttgttacaaaatta--gttcaatcttttaaaccatattttctctctcc 47222539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 504 - 599
Target Start/End: Original strand, 40261908 - 40262001
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||||||||||||||||||||||||   |||||||  | ||||||||||||||||||   || ||||||||||| ||||||||| ||||||    
T  40261908 aaacaaataatttagtttgtttggatacaactatataaaaagggttttttgttacaaaatta--gttcaatattttaaaacatattttccctctcc 40262001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 379 - 434
Target Start/End: Complemental strand, 1644823 - 1644768
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattata 434  Q
    ||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||    
T  1644823 gtttgttacggattaaaataaaattgatttttatataaaataatttagagattata 1644768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 26151391 - 26151289
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    ||||| || |||||||||||| ||||||||| ||||||||| ||||||||||| | |||||| ||||||||| ||||| || |||| |||| ||| ||||    
T  26151391 gtttgatatggattaaaataagagtgattttcacataaaattatttagagatt-ttttttagtgattttatgtaaaattagaatctgttttgcgtatgtt 26151293  T
Q  479 tacc 482  Q
    ||||    
T  26151292 tacc 26151289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 504 - 599
Target Start/End: Complemental strand, 10283394 - 10283301
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||||||||||||||||||||| ||||||    |||||||| ||||||||||||||||||||   || |||  |||||||||||||| ||||||||    
T  10283394 aaacaaataatttagtttgtttcgatacagctatataaaagggattttttgttacaaaatta--gttcaatcgtttaaaccatatttcctctctcc 10283301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 504 - 599
Target Start/End: Complemental strand, 26970509 - 26970416
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    ||||||||||||||||||||||||||||||   ||| |||  ||||||||||||||||||||   || ||| ||||||| |||||||| |||||||    
T  26970509 aaacaaataatttagtttgtttggatacaactatatgaaaatgattttttgttacaaaatta--gttcaatgttttaaatcatattttatctctcc 26970416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 446
Target Start/End: Complemental strand, 35526833 - 35526765
Alignment:
Q  379 gtttgttacgg-attaaaataaaagtgattttgacataaaataatttagagattatattttagagattt 446  Q
    ||||||||||| |||||||||| | ||||||||||||||||||||||| ||||||| || |||||||||    
T  35526833 gtttgttacgggattaaaataatactgattttgacataaaataatttatagattattttatagagattt 35526765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 489
Target Start/End: Original strand, 11749931 - 11750025
Alignment:
Q  394 aaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaa 489  Q
    |||||||||||||||||| || ||| || ||||| ||||  |||||||||||||||| |||||||  ||||||||| | |||||||| ||||||||    
T  11749931 aaataaaagtgattttgatattaaagaacttagatattac-ttttagagattttatgtaaaatcataatctattttgcatttgtttatcgtactaa 11750025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 422 - 465
Target Start/End: Original strand, 40261848 - 40261891
Alignment:
Q  422 tttagagattatattttagagattttatgaaaaatcaggatcta 465  Q
    |||||||||||||||||||||||||||||||||||||| |||||    
T  40261848 tttagagattatattttagagattttatgaaaaatcagaatcta 40261891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 4594710 - 4594660
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagat 430  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  4594710 tttgttatggattaaaataaaagtgattttaacataaaataatttaaagat 4594660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 470
Target Start/End: Original strand, 29834466 - 29834547
Alignment:
Q  391 ttaaaataaaagtgattttgacataaaataatttagagatta--tattttagagattttatgaaaaatcaggatctatttta 470  Q
    ||||||||||||| | |||||  |||||||||||||||||||  | ||||||||||||||| |||||| || ||||||||||    
T  29834466 ttaaaataaaagtaagtttgaggtaaaataatttagagattatttcttttagagattttattaaaaattagaatctatttta 29834547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 381 - 431
Target Start/End: Original strand, 32988467 - 32988517
Alignment:
Q  381 ttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  32988467 ttgttatggattaaaataaaagtgattttgatattaaataatttagagatt 32988517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 240
Target Start/End: Complemental strand, 38622946 - 38622872
Alignment:
Q  166 tagcagaatttgaagaaataggtattgttccatgataagctatttattacaaaatcttgtcaaacagcggctata 240  Q
    |||||||||||||| |||| | |||||||||||||||  |||||||  ||||||| |||||||| ||||||||||    
T  38622946 tagcagaatttgaataaatcgatattgttccatgatacactatttagcacaaaatgttgtcaaatagcggctata 38622872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 390 - 431
Target Start/End: Original strand, 38319868 - 38319909
Alignment:
Q  390 attaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  38319868 attaaaataaaagtgattttcacataaaataatttagagatt 38319909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 383 - 435
Target Start/End: Original strand, 29854560 - 29854612
Alignment:
Q  383 gttacggattaaaataaaagtgattttgacataaaataatttagagattatat 435  Q
    ||||| ||||||||||||||| |||||||| |||||||||||| |||||||||    
T  29854560 gttacagattaaaataaaagtaattttgacgtaaaataatttaaagattatat 29854612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 379 - 431
Target Start/End: Original strand, 31277316 - 31277368
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||| ||| |||||||||||||| |||||||| ||||||||||||||||||||    
T  31277316 gtttattatggattaaaataaaaatgattttggcataaaataatttagagatt 31277368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 508 - 598
Target Start/End: Original strand, 21696475 - 21696562
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctc 598  Q
    ||||| ||||||||||||||||||||   |||||||| ||||||||||||||||||||   || ||| |||| || |||||||||||||||    
T  21696475 aaatagtttagtttgtttggatacaactatataaaag-gattttttgttacaaaatta--gttcaatcttttgaatcatattttctctctc 21696562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 537 - 599
Target Start/End: Original strand, 29854709 - 29854769
Alignment:
Q  537 tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||||||||||||||| ||||||||||||   || |||||||| |||||||||||||||||||    
T  29854709 tataaaagagatttttcgttacaaaatta--gttcaatattttgaaccatattttctctctcc 29854769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 382 - 482
Target Start/End: Original strand, 35527349 - 35527441
Alignment:
Q  382 tgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtttac 481  Q
    |||||| |||||||||||||||||||||| ||||||||| | |        | || | |||||||||||||||||||| ||||||||| |||||||||||    
T  35527349 tgttacagattaaaataaaagtgattttgccataaaatagtct--------ttttatggagattttatgaaaaatcagaatctattttgcgtttgtttac 35527440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 420
Target Start/End: Complemental strand, 1067247 - 1067210
Alignment:
Q  383 gttacggattaaaataaaagtgattttgacataaaata 420  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  1067247 gttacggattaaaataaaagtgattttcacataaaata 1067210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 446 - 495
Target Start/End: Complemental strand, 4594658 - 4594609
Alignment:
Q  446 ttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatca 495  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||| |||||    
T  4594658 ttatgaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatca 4594609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 398 - 455
Target Start/End: Original strand, 16174944 - 16175001
Alignment:
Q  398 aaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaa 455  Q
    |||| ||||||||||||  ||||||||||||||||| ||||||||| |||||| ||||    
T  16174944 aaaaatgattttgacatttaataatttagagattattttttagagactttatgcaaaa 16175001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 504 - 565
Target Start/End: Original strand, 46897939 - 46898000
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaatta 565  Q
    ||||||||||| ||||||||||||||| ||    ||||||| ||||||||||||||||||||    
T  46897939 aaacaaataatctagtttgtttggatataactagataaaagggattttttgttacaaaatta 46898000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 436 - 496
Target Start/End: Original strand, 31277359 - 31277419
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcac 496  Q
    |||||||||||||||||||||||| || |||||| | ||||||||||| | ||| ||||||    
T  31277359 tttagagattttatgaaaaatcagaatttattttgcatttgtttaccgcaataaaaatcac 31277419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 420 - 459
Target Start/End: Original strand, 35525817 - 35525856
Alignment:
Q  420 aatttagagattatattttagagattttatgaaaaatcag 459  Q
    |||||||| ||||||||||||||||||||| |||||||||    
T  35525817 aatttagatattatattttagagattttataaaaaatcag 35525856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 462 - 533
Target Start/End: Original strand, 11485913 - 11485984
Alignment:
Q  462 tctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaa 533  Q
    |||||||| ||||||||||||||  ||| ||| ||       ||||||||||||||||||||||||||||||    
T  11485913 tctattttgcgtttgtttaccgtgataaaaattactttttttaaacaaataatttagtttgtttggatacaa 11485984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 380 - 422
Target Start/End: Complemental strand, 15641701 - 15641659
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataat 422  Q
    |||||||  ||||||||||||| ||||||||||||||||||||    
T  15641701 tttgttattgattaaaataaaaatgattttgacataaaataat 15641659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 512 - 562
Target Start/End: Complemental strand, 18984764 - 18984714
Alignment:
Q  512 aatttagtttgtttggatacaaacttataaaagagattttttgttacaaaa 562  Q
    ||||||||||||||||||||||   ||||||||| |||||| |||||||||    
T  18984764 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18984714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 512 - 562
Target Start/End: Complemental strand, 18989579 - 18989529
Alignment:
Q  512 aatttagtttgtttggatacaaacttataaaagagattttttgttacaaaa 562  Q
    ||||||||||||||||||||||   ||||||||| |||||| |||||||||    
T  18989579 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18989529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 512 - 562
Target Start/End: Complemental strand, 18999393 - 18999343
Alignment:
Q  512 aatttagtttgtttggatacaaacttataaaagagattttttgttacaaaa 562  Q
    ||||||||||||||||||||||   ||||||||| |||||| |||||||||    
T  18999393 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 18999343  T

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Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 482
Target Start/End: Complemental strand, 5373103 - 5373050
Alignment:
Q  429 attatattttagagattttatgaaaaatcaggatctattttacgtttgtttacc 482  Q
    ||||| || |||||||||||||||||||||| ||  ||||| ||||||||||||    
T  5373103 attattttatagagattttatgaaaaatcagaattcattttgcgtttgtttacc 5373050  T

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Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 561
Target Start/End: Original strand, 30122177 - 30122234
Alignment:
Q  504 aaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaa 561  Q
    |||||||||||||||||||||||||| | |   ||||||||  |||||||||||||||    
T  30122177 aaacaaataatttagtttgtttggattctactatataaaaggaattttttgttacaaa 30122234  T

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Target: scaffold0016 (Bit Score: 106; Significance: 1e-52; HSPs: 3)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 374 - 599
Target Start/End: Original strand, 205116 - 205337
Alignment:
Q  374 ggctggtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgt 473  Q
    |||| ||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||| |||    
T  205116 ggcttgtttgttacggattaaaatgatagtgattttgacataaaataatt-agagattatattttagagattttatgaaaaattagaatctattttgcgt 205214  T
Q  474 ttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaa 573  Q
    |||||||||||| ||| |||||        ||||||||||| |||||||||| |||||||   ||||||||| |||||||||||||||||||   || ||    
T  205215 ttgtttaccgtaataaaaatcattttttttaaacaaataatctagtttgtttagatacaactatataaaaga-attttttgttacaaaatta--gttcaa 205311  T
Q  574 tattttaaaccatattttctctctcc 599  Q
    | |||||||| |||||||||||||||    
T  205312 tcttttaaacaatattttctctctcc 205337  T

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Target: scaffold0016; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 436 - 599
Target Start/End: Complemental strand, 106233 - 106072
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||| ||||||       ||||||||||| | ||||||||||||||||      
T  106233 tttagagattttatgaaaaatcagaatctattttgcgtttgtttaccgtaataaaaatcactttttttaaacaaataatcttgtttgtttggatacaact 106134  T
Q  536 ttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
     |||||||  ||||||||||||||||||||   || ||| ||||||| ||||||||||||||||    
T  106133 atataaaaaggattttttgttacaaaatta--gttcaatcttttaaatcatattttctctctcc 106072  T

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Target: scaffold0016; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 106275 - 106224
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  106275 gtttgttacagattaaa-taaaagtgattttgacataaaataatttagagatt 106224  T

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Target: scaffold0006 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 379 - 482
Target Start/End: Complemental strand, 71586 - 71483
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagattatattttagagattttatgaaaaatcaggatctattttacgtttgtt 478  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |  |||||||| |||||||||| |||||||    
T  71586 gtttgttatggattaaaataaaagtgattttgacataaaataatttagagattatgttttagagattctttacaaaatcagaatctattttatgtttgtt 71487  T
Q  479 tacc 482  Q
    ||||    
T  71486 tacc 71483  T

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Target: scaffold0224 (Bit Score: 53; Significance: 5e-21; HSPs: 2)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 379 - 431
Target Start/End: Complemental strand, 21898 - 21846
Alignment:
Q  379 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 431  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21898 gtttgttacggattaaaataaaagtgattttgacataaaataatttagagatt 21846  T

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Target: scaffold0224; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 436 - 599
Target Start/End: Original strand, 21920 - 22079
Alignment:
Q  436 tttagagattttatgaaaaatcaggatctattttacgtttgtttaccgtactaagaatcacnnnnnnnaaacaaataatttagtttgtttggatacaaac 535  Q
    |||||||||| ||||||||||||   | ||||||  ||||||||| | || ||| ||||||       ||||||||||||||||||||||||||   |||    
T  21920 tttagagattgtatgaaaaatcaaattatattttgtgtttgtttatcataataaaaatcacttttttaaaacaaataatttagtttgtttggat---aac 22016  T
Q  536 t-tataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    | |||||||| ||||||||||||||||||||   || ||| |||||| | |||||||||||||||    
T  22017 tatataaaagggattttttgttacaaaatta--gttcaatcttttaatctatattttctctctcc 22079  T

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Target: scaffold0376 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 430 - 482
Target Start/End: Complemental strand, 2110 - 2058
Alignment:
Q  430 ttatattttagagattttatgaaaaatcaggatctattttacgtttgtttacc 482  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2110 ttatattttagagattttatgaaaaatcagaatctattttacgtttgtttacc 2058  T

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Target: scaffold0267 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 517 - 568
Target Start/End: Original strand, 3243 - 3294
Alignment:
Q  517 agtttgtttggatacaaacttataaaagagattttttgttacaaaattaatt 568  Q
    |||||||||||||||||   |||||||| |||||||||||||||||||||||    
T  3243 agtttgtttggatacaactatataaaagtgattttttgttacaaaattaatt 3294  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 508 - 599
Target Start/End: Complemental strand, 150280 - 150191
Alignment:
Q  508 aaataatttagtttgtttggatacaaacttataaaagagattttttgttacaaaattaatttttaatattttaaaccatattttctctctcc 599  Q
    |||||||||  ||||||||||| |||   |||||||| |||||||| | ||||||||| ||   ||| ||||||||||||||||||||||||    
T  150280 aaataatttgatttgtttggatgcaattatataaaagggattttttataacaaaattagttc--aatcttttaaaccatattttctctctcc 150191  T

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Target: scaffold0625 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 512 - 562
Target Start/End: Original strand, 7182 - 7232
Alignment:
Q  512 aatttagtttgtttggatacaaacttataaaagagattttttgttacaaaa 562  Q
    ||||||||||||||||||||||   ||||||||| |||||| |||||||||    
T  7182 aatttagtttgtttggatacaactatataaaagacatttttcgttacaaaa 7232  T

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Target: scaffold0283 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 433
Target Start/End: Complemental strand, 10427 - 10375
Alignment:
Q  380 tttgttacggattaaaataaaagtgattttgacataaaataatttagagattat 433  Q
    |||||||  ||||||||||||||||| ||||| || ||||||||||||||||||    
T  10427 tttgttatagattaaaataaaagtgaatttgatat-aaataatttagagattat 10375  T

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