View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1002-Insertion-8 (Length: 773)

Name: NF1002-Insertion-8
Description: NF1002
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1002-Insertion-8
NF1002-Insertion-8
[»] chr2 (83 HSPs)
chr2 (219-773)||(42658751-42659305)
chr2 (7-162)||(42658539-42658694)
chr2 (680-760)||(41812151-41812231)
chr2 (610-683)||(449913-449986)
chr2 (596-683)||(31744364-31744451)
chr2 (684-773)||(12464538-12464627)
chr2 (590-679)||(15305744-15305833)
chr2 (589-682)||(30331818-30331911)
chr2 (684-773)||(41241197-41241286)
chr2 (598-683)||(41812011-41812096)
chr2 (598-682)||(15757577-15757661)
chr2 (596-683)||(4606991-4607078)
chr2 (596-679)||(7928215-7928298)
chr2 (609-683)||(13325636-13325710)
chr2 (692-773)||(42868534-42868615)
chr2 (600-683)||(33319737-33319818)
chr2 (609-672)||(21828039-21828102)
chr2 (596-679)||(27317449-27317532)
chr2 (600-683)||(42419859-42419942)
chr2 (598-660)||(3312166-3312228)
chr2 (699-773)||(32592503-32592577)
chr2 (684-773)||(41407217-41407307)
chr2 (590-683)||(11863967-11864059)
chr2 (599-683)||(40682312-40682399)
chr2 (684-772)||(15305574-15305662)
chr2 (598-682)||(23974412-23974496)
chr2 (606-678)||(36534839-36534911)
chr2 (597-672)||(2142731-2142806)
chr2 (684-762)||(15757723-15757802)
chr2 (698-773)||(31561832-31561907)
chr2 (590-672)||(41241043-41241126)
chr2 (618-682)||(43279466-43279532)
chr2 (684-762)||(2227093-2227171)
chr2 (596-657)||(15370240-15370302)
chr2 (596-682)||(39659426-39659512)
chr2 (684-773)||(10490545-10490634)
chr2 (608-677)||(38916238-38916307)
chr2 (591-660)||(42868393-42868462)
chr2 (691-772)||(45229429-45229510)
chr2 (596-679)||(26143559-26143640)
chr2 (590-682)||(26202095-26202187)
chr2 (601-681)||(31561664-31561744)
chr2 (600-683)||(40158783-40158867)
chr2 (608-683)||(750736-750811)
chr2 (698-773)||(10258592-10258667)
chr2 (734-773)||(11863847-11863886)
chr2 (596-683)||(45229577-45229664)
chr2 (598-683)||(787397-787483)
chr2 (699-773)||(13325486-13325560)
chr2 (597-647)||(18179051-18179101)
chr2 (592-638)||(33942017-33942063)
chr2 (597-683)||(43036622-43036708)
chr2 (684-773)||(43279594-43279681)
chr2 (600-657)||(12464394-12464451)
chr2 (618-683)||(18066194-18066259)
chr2 (598-679)||(20952425-20952506)
chr2 (710-771)||(22971609-22971669)
chr2 (610-647)||(29628673-29628710)
chr2 (684-773)||(41851451-41851540)
chr2 (595-660)||(44119871-44119936)
chr2 (597-680)||(8017502-8017586)
chr2 (610-654)||(9174910-9174954)
chr2 (591-679)||(10619132-10619220)
chr2 (596-679)||(12313090-12313174)
chr2 (610-682)||(24100995-24101067)
chr2 (592-683)||(28677572-28677664)
chr2 (611-683)||(41293095-41293167)
chr2 (614-682)||(41851602-41851670)
chr2 (600-676)||(44590097-44590173)
chr2 (640-683)||(1801733-1801776)
chr2 (730-773)||(26201944-26201987)
chr2 (610-672)||(1633431-1633493)
chr2 (613-683)||(19608567-19608637)
chr2 (591-637)||(29936140-29936186)
chr2 (596-683)||(33503072-33503151)
chr2 (598-652)||(36125456-36125510)
chr2 (598-636)||(40837356-40837394)
chr2 (684-773)||(3311960-3312049)
chr2 (684-773)||(12795708-12795797)
chr2 (724-769)||(23974595-23974640)
chr2 (610-647)||(28330241-28330278)
chr2 (596-682)||(32592653-32592741)
chr2 (619-683)||(32837388-32837453)
[»] chr7 (56 HSPs)
chr7 (580-773)||(46078063-46078267)
chr7 (590-682)||(19302474-19302566)
chr7 (596-683)||(5947307-5947394)
chr7 (596-679)||(48470114-48470197)
chr7 (618-682)||(19022524-19022588)
chr7 (608-676)||(27863654-27863722)
chr7 (684-772)||(30570996-30571084)
chr7 (684-773)||(45264009-45264100)
chr7 (596-679)||(4970709-4970792)
chr7 (611-682)||(33601342-33601413)
chr7 (606-682)||(420427-420503)
chr7 (592-683)||(3836596-3836688)
chr7 (684-772)||(4970858-4970941)
chr7 (589-676)||(36517650-36517737)
chr7 (684-766)||(420283-420365)
chr7 (596-682)||(17944260-17944346)
chr7 (620-674)||(19214347-19214401)
chr7 (606-660)||(20234549-20234603)
chr7 (590-676)||(48140276-48140361)
chr7 (611-660)||(18765373-18765422)
chr7 (606-683)||(33678846-33678923)
chr7 (618-683)||(44776918-44776983)
chr7 (596-653)||(44822054-44822111)
chr7 (600-660)||(9210910-9210970)
chr7 (598-682)||(11619077-11619161)
chr7 (598-666)||(22283565-22283633)
chr7 (600-660)||(45338542-45338602)
chr7 (596-683)||(45593594-45593682)
chr7 (590-637)||(1418531-1418578)
chr7 (591-682)||(3927922-3928013)
chr7 (710-773)||(20428383-20428446)
chr7 (730-773)||(21568739-21568782)
chr7 (615-682)||(33601963-33602030)
chr7 (596-682)||(25596099-25596185)
chr7 (596-682)||(33128819-33128904)
chr7 (598-660)||(33266405-33266467)
chr7 (730-768)||(48140137-48140175)
chr7 (724-773)||(9210544-9210593)
chr7 (733-766)||(17983715-17983748)
chr7 (591-640)||(40252035-40252084)
chr7 (611-675)||(21196342-21196406)
chr7 (596-660)||(39907890-39907954)
chr7 (596-679)||(40687464-40687547)
chr7 (698-773)||(45806556-45806631)
chr7 (609-660)||(46280210-46280261)
chr7 (597-672)||(46407310-46407385)
chr7 (610-683)||(8094371-8094445)
chr7 (598-672)||(11782962-11783036)
chr7 (591-669)||(18962495-18962573)
chr7 (597-683)||(34035983-34036069)
chr7 (592-682)||(34744095-34744185)
chr7 (597-671)||(37064386-37064460)
chr7 (599-680)||(49019937-49020019)
chr7 (601-677)||(32410611-32410688)
chr7 (704-773)||(33128673-33128742)
chr7 (684-749)||(40252172-40252237)
[»] chr5 (70 HSPs)
chr5 (588-682)||(16937792-16937886)
chr5 (596-683)||(10640019-10640106)
chr5 (596-683)||(12433090-12433177)
chr5 (598-683)||(41419385-41419470)
chr5 (596-668)||(19460243-19460315)
chr5 (598-681)||(41534506-41534589)
chr5 (598-689)||(43300938-43301029)
chr5 (685-768)||(35445975-35446059)
chr5 (596-682)||(7705915-7706001)
chr5 (598-683)||(34736446-34736531)
chr5 (598-675)||(39594881-39594958)
chr5 (606-670)||(15015922-15015986)
chr5 (596-684)||(15246898-15246986)
chr5 (606-681)||(3520645-3520720)
chr5 (599-682)||(9107157-9107240)
chr5 (596-683)||(42100377-42100464)
chr5 (610-660)||(12425662-12425712)
chr5 (606-672)||(32372689-32372755)
chr5 (598-683)||(11700228-11700313)
chr5 (597-676)||(1773024-1773101)
chr5 (611-683)||(11064732-11064804)
chr5 (596-671)||(6521156-6521231)
chr5 (713-768)||(7999127-7999182)
chr5 (611-682)||(29925908-29925978)
chr5 (596-683)||(32942660-32942747)
chr5 (596-679)||(40426835-40426918)
chr5 (699-773)||(7319091-7319165)
chr5 (589-683)||(7674713-7674807)
chr5 (684-770)||(16458044-16458129)
chr5 (684-773)||(32372540-32372629)
chr5 (610-683)||(35445775-35445848)
chr5 (599-683)||(39105530-39105615)
chr5 (697-766)||(42500303-42500372)
chr5 (697-773)||(3735569-3735645)
chr5 (610-682)||(34102244-34102316)
chr5 (596-681)||(39248166-39248247)
chr5 (606-681)||(7985037-7985112)
chr5 (600-654)||(10771809-10771864)
chr5 (635-682)||(16457935-16457982)
chr5 (600-683)||(40438875-40438958)
chr5 (596-683)||(41535447-41535534)
chr5 (597-679)||(1464938-1465020)
chr5 (597-683)||(9202666-9202752)
chr5 (622-680)||(19460330-19460388)
chr5 (601-647)||(22209746-22209792)
chr5 (606-660)||(27298189-27298243)
chr5 (620-674)||(41981644-41981698)
chr5 (613-683)||(42228105-42228175)
chr5 (598-683)||(14932363-14932447)
chr5 (597-673)||(32941545-32941622)
chr5 (635-680)||(39154960-39155005)
chr5 (598-682)||(12857257-12857341)
chr5 (598-682)||(12857624-12857708)
chr5 (615-683)||(31038350-31038418)
chr5 (615-683)||(31047574-31047642)
chr5 (684-771)||(1130887-1130973)
chr5 (600-682)||(2973464-2973547)
chr5 (612-647)||(6096649-6096684)
chr5 (593-636)||(37954800-37954843)
chr5 (684-766)||(6521028-6521109)
chr5 (704-754)||(12554398-12554448)
chr5 (700-762)||(15015778-15015840)
chr5 (598-640)||(40848850-40848892)
chr5 (590-679)||(25461559-25461647)
chr5 (684-773)||(29925757-29925846)
chr5 (724-773)||(32009906-32009955)
chr5 (722-771)||(34667815-34667864)
chr5 (611-683)||(37611147-37611220)
chr5 (611-683)||(37787877-37787950)
chr5 (597-630)||(42647009-42647042)
[»] chr1 (88 HSPs)
chr1 (596-682)||(2295163-2295249)
chr1 (590-679)||(38247397-38247486)
chr1 (594-682)||(5720992-5721080)
chr1 (596-682)||(14576571-14576657)
chr1 (684-773)||(27976511-27976600)
chr1 (590-683)||(37473469-37473566)
chr1 (609-681)||(38001663-38001735)
chr1 (596-676)||(43230689-43230769)
chr1 (684-752)||(47432033-47432101)
chr1 (610-682)||(49938814-49938886)
chr1 (608-679)||(29904821-29904892)
chr1 (594-682)||(5741673-5741761)
chr1 (598-682)||(50644174-50644258)
chr1 (597-660)||(34952291-34952354)
chr1 (686-773)||(37473315-37473402)
chr1 (610-680)||(6102223-6102292)
chr1 (598-683)||(6292558-6292643)
chr1 (610-660)||(33204325-33204375)
chr1 (600-681)||(2777959-2778040)
chr1 (597-678)||(3233933-3234014)
chr1 (596-660)||(2295280-2295344)
chr1 (697-773)||(14331705-14331781)
chr1 (596-660)||(14385710-14385774)
chr1 (596-676)||(34795363-34795443)
chr1 (598-682)||(37617384-37617468)
chr1 (600-683)||(1432581-1432664)
chr1 (730-773)||(5741578-5741621)
chr1 (596-647)||(15477655-15477706)
chr1 (596-678)||(473234-473316)
chr1 (597-683)||(7941672-7941758)
chr1 (596-682)||(33186373-33186459)
chr1 (610-683)||(10233579-10233652)
chr1 (593-682)||(14332048-14332137)
chr1 (610-682)||(6557039-6557111)
chr1 (594-682)||(13810065-13810153)
chr1 (685-773)||(14576719-14576807)
chr1 (688-752)||(30582017-30582081)
chr1 (685-761)||(43990179-43990255)
chr1 (596-680)||(47498757-47498840)
chr1 (730-773)||(5720897-5720940)
chr1 (710-773)||(17830070-17830133)
chr1 (734-773)||(24552455-24552494)
chr1 (684-747)||(30581744-30581807)
chr1 (684-771)||(41505605-41505691)
chr1 (598-680)||(41638227-41638310)
chr1 (599-682)||(42575389-42575472)
chr1 (597-683)||(3887550-3887636)
chr1 (600-638)||(22416832-22416870)
chr1 (589-647)||(28287901-28287959)
chr1 (697-771)||(37631637-37631711)
chr1 (606-683)||(41195123-41195198)
chr1 (724-773)||(2295020-2295069)
chr1 (598-647)||(27146174-27146223)
chr1 (607-683)||(31517668-31517745)
chr1 (610-683)||(39976141-39976214)
chr1 (598-639)||(41505784-41505825)
chr1 (589-638)||(48282233-48282282)
chr1 (684-773)||(51688621-51688710)
chr1 (618-683)||(52863290-52863355)
chr1 (600-659)||(4549462-4549522)
chr1 (618-686)||(7119877-7119945)
chr1 (684-768)||(7861999-7862083)
chr1 (614-682)||(37517101-37517169)
chr1 (619-683)||(38018304-38018368)
chr1 (608-660)||(39658438-39658490)
chr1 (687-770)||(41195261-41195345)
chr1 (611-683)||(43990323-43990395)
chr1 (627-678)||(9572049-9572100)
chr1 (598-637)||(21002267-21002306)
chr1 (730-773)||(33541819-33541862)
chr1 (609-660)||(38116188-38116239)
chr1 (610-656)||(15784410-15784456)
chr1 (684-750)||(24915116-24915182)
chr1 (589-671)||(36872806-36872888)
chr1 (613-683)||(37769606-37769676)
chr1 (610-660)||(38116008-38116058)
chr1 (611-652)||(7028399-7028440)
chr1 (615-660)||(7107448-7107493)
chr1 (610-683)||(11941328-11941401)
chr1 (684-773)||(14385828-14385917)
chr1 (600-637)||(18327067-18327104)
chr1 (598-683)||(27976670-27976752)
chr1 (592-637)||(30815567-30815612)
chr1 (596-645)||(37631476-37631525)
chr1 (606-683)||(37842283-37842360)
chr1 (730-771)||(42174775-42174816)
chr1 (686-773)||(44932002-44932086)
chr1 (641-682)||(51929501-51929542)
[»] chr4 (71 HSPs)
chr4 (596-682)||(54426110-54426196)
chr4 (596-678)||(21731573-21731655)
chr4 (597-678)||(35571549-35571630)
chr4 (594-681)||(55437144-55437231)
chr4 (596-682)||(26782-26868)
chr4 (593-682)||(15173217-15173306)
chr4 (598-683)||(24169329-24169414)
chr4 (684-773)||(50681154-50681243)
chr4 (598-682)||(39603090-39603173)
chr4 (597-684)||(27043748-27043835)
chr4 (593-660)||(44862898-44862965)
chr4 (597-683)||(13126494-13126580)
chr4 (699-773)||(24169177-24169250)
chr4 (596-682)||(29388681-29388767)
chr4 (684-773)||(22030120-22030208)
chr4 (680-772)||(18425730-18425821)
chr4 (596-660)||(18815112-18815176)
chr4 (596-683)||(17822782-17822869)
chr4 (596-678)||(23319924-23320004)
chr4 (596-679)||(25904140-25904223)
chr4 (698-773)||(43505872-43505947)
chr4 (596-678)||(39691066-39691148)
chr4 (685-771)||(41336679-41336764)
chr4 (596-682)||(42403940-42404025)
chr4 (606-683)||(52172790-52172868)
chr4 (684-773)||(16200046-16200135)
chr4 (688-769)||(17204058-17204139)
chr4 (684-773)||(19494830-19494919)
chr4 (605-682)||(29657451-29657528)
chr4 (593-682)||(41336827-41336916)
chr4 (596-657)||(44797972-44798033)
chr4 (606-683)||(49939878-49939955)
chr4 (597-673)||(8705017-8705093)
chr4 (610-682)||(22030270-22030342)
chr4 (599-683)||(23459693-23459777)
chr4 (597-677)||(49940085-49940165)
chr4 (600-683)||(52315118-52315201)
chr4 (596-682)||(27329993-27330079)
chr4 (597-682)||(1374494-1374579)
chr4 (614-679)||(1706692-1706757)
chr4 (621-682)||(2244118-2244179)
chr4 (587-680)||(25571328-25571421)
chr4 (685-766)||(54069483-54069564)
chr4 (697-773)||(4306227-4306303)
chr4 (600-683)||(19304991-19305075)
chr4 (684-760)||(25904275-25904351)
chr4 (610-682)||(39011059-39011131)
chr4 (596-682)||(40830947-40831033)
chr4 (685-772)||(55414486-55414573)
chr4 (684-754)||(9760375-9760445)
chr4 (611-673)||(40174633-40174695)
chr4 (610-683)||(22662076-22662149)
chr4 (610-683)||(22666555-22666628)
chr4 (685-762)||(31076452-31076529)
chr4 (704-773)||(31851370-31851439)
chr4 (596-637)||(38478824-38478865)
chr4 (609-670)||(49003972-49004033)
chr4 (598-682)||(21043155-21043239)
chr4 (730-766)||(33587065-33587101)
chr4 (611-683)||(56249589-56249661)
chr4 (599-682)||(2386524-2386607)
chr4 (597-683)||(7367972-7368059)
chr4 (598-637)||(29126182-29126221)
chr4 (606-636)||(1075571-1075601)
chr4 (621-683)||(20719769-20719831)
chr4 (596-646)||(55302352-55302402)
chr4 (596-670)||(55414330-55414404)
chr4 (684-773)||(15177267-15177356)
chr4 (610-683)||(34430629-34430702)
chr4 (610-683)||(49003806-49003879)
chr4 (596-657)||(53294031-53294092)
[»] chr8 (64 HSPs)
chr8 (607-683)||(1058005-1058081)
chr8 (684-771)||(1058139-1058226)
chr8 (596-678)||(30251371-30251453)
chr8 (597-682)||(36963272-36963357)
chr8 (611-682)||(26771332-26771403)
chr8 (610-683)||(27028897-27028970)
chr8 (610-682)||(35534544-35534616)
chr8 (591-682)||(35643900-35643991)
chr8 (590-673)||(43717845-43717928)
chr8 (609-683)||(31716157-31716231)
chr8 (596-682)||(38648418-38648504)
chr8 (589-682)||(15180607-15180699)
chr8 (596-677)||(43045642-43045723)
chr8 (668-760)||(12497280-12497372)
chr8 (596-683)||(13958003-13958088)
chr8 (596-660)||(38602416-38602480)
chr8 (598-657)||(9130238-9130297)
chr8 (679-773)||(10758316-10758410)
chr8 (589-683)||(40981170-40981264)
chr8 (693-773)||(14956369-14956449)
chr8 (606-678)||(18133727-18133799)
chr8 (620-683)||(1930101-1930164)
chr8 (601-676)||(12976285-12976360)
chr8 (597-683)||(14280339-14280426)
chr8 (730-773)||(38750274-38750317)
chr8 (599-682)||(40859703-40859785)
chr8 (606-683)||(11376768-11376846)
chr8 (611-673)||(12497004-12497066)
chr8 (598-660)||(29818863-29818925)
chr8 (598-660)||(44792745-44792807)
chr8 (704-773)||(12976129-12976198)
chr8 (610-683)||(32840917-32840990)
chr8 (724-773)||(38353266-38353315)
chr8 (684-769)||(42043410-42043495)
chr8 (590-682)||(900622-900713)
chr8 (610-682)||(10758188-10758260)
chr8 (596-680)||(33808372-33808455)
chr8 (697-773)||(35534689-35534763)
chr8 (619-678)||(28763439-28763498)
chr8 (597-680)||(42893408-42893491)
chr8 (598-660)||(1096579-1096641)
chr8 (598-683)||(2487927-2488013)
chr8 (596-681)||(16162827-16162913)
chr8 (596-678)||(44843358-44843440)
chr8 (697-766)||(16825615-16825684)
chr8 (596-649)||(32213219-32213272)
chr8 (611-680)||(38750426-38750495)
chr8 (689-761)||(25930624-25930696)
chr8 (596-672)||(27493014-27493090)
chr8 (606-678)||(41589657-41589729)
chr8 (606-653)||(5404686-5404733)
chr8 (596-678)||(6526169-6526252)
chr8 (642-685)||(10722687-10722730)
chr8 (597-660)||(18591894-18591957)
chr8 (730-773)||(27028755-27028798)
chr8 (632-683)||(27754469-27754520)
chr8 (610-644)||(3536876-3536910)
chr8 (610-659)||(6950411-6950461)
chr8 (625-683)||(16210828-16210886)
chr8 (607-680)||(24326099-24326173)
chr8 (713-771)||(32975978-32976036)
chr8 (610-676)||(35749501-35749567)
chr8 (598-660)||(42052132-42052194)
chr8 (615-680)||(42043291-42043356)
[»] chr3 (75 HSPs)
chr3 (606-682)||(31365115-31365191)
chr3 (606-677)||(22893-22964)
chr3 (599-679)||(24085258-24085338)
chr3 (597-681)||(39980797-39980881)
chr3 (600-683)||(21367733-21367816)
chr3 (684-773)||(24684888-24684977)
chr3 (684-773)||(35959521-35959610)
chr3 (685-773)||(20880393-20880480)
chr3 (684-770)||(583965-584051)
chr3 (599-677)||(584118-584196)
chr3 (593-679)||(9832669-9832755)
chr3 (684-773)||(20170439-20170528)
chr3 (593-682)||(20880543-20880632)
chr3 (684-773)||(30956691-30956780)
chr3 (684-773)||(30972503-30972592)
chr3 (606-682)||(31365236-31365312)
chr3 (592-682)||(20257603-20257694)
chr3 (596-670)||(47132397-47132469)
chr3 (600-673)||(18405752-18405825)
chr3 (613-682)||(30443960-30444029)
chr3 (590-683)||(16072952-16073047)
chr3 (596-683)||(402459-402546)
chr3 (592-683)||(38902132-38902222)
chr3 (608-683)||(46778120-46778195)
chr3 (599-682)||(51929277-51929360)
chr3 (608-682)||(13715501-13715575)
chr3 (596-654)||(20170631-20170689)
chr3 (597-683)||(26878266-26878352)
chr3 (699-773)||(46778307-46778381)
chr3 (590-683)||(53762305-53762399)
chr3 (614-683)||(3845498-3845567)
chr3 (606-683)||(5436138-5436215)
chr3 (597-654)||(25447163-25447220)
chr3 (610-683)||(34610737-34610810)
chr3 (606-683)||(39602138-39602215)
chr3 (596-672)||(42799883-42799960)
chr3 (614-681)||(3776325-3776393)
chr3 (610-682)||(24684753-24684825)
chr3 (686-773)||(37689149-37689234)
chr3 (688-771)||(19983698-19983780)
chr3 (597-681)||(36507010-36507096)
chr3 (596-679)||(46886609-46886692)
chr3 (598-660)||(26990144-26990206)
chr3 (596-681)||(44014715-44014801)
chr3 (699-771)||(466120-466192)
chr3 (732-773)||(1508694-1508735)
chr3 (611-680)||(28881691-28881760)
chr3 (638-683)||(34637944-34637989)
chr3 (590-647)||(49556966-49557023)
chr3 (684-773)||(53789526-53789615)
chr3 (607-643)||(5448550-5448586)
chr3 (685-752)||(849599-849666)
chr3 (606-677)||(4495105-4495176)
chr3 (684-766)||(18405896-18405979)
chr3 (612-683)||(22203496-22203566)
chr3 (596-646)||(1820049-1820098)
chr3 (699-773)||(2719385-2719459)
chr3 (589-647)||(36630961-36631018)
chr3 (621-683)||(37389249-37389311)
chr3 (606-680)||(42545325-42545399)
chr3 (610-676)||(43046738-43046803)
chr3 (740-773)||(139794-139827)
chr3 (606-682)||(4401111-4401185)
chr3 (685-754)||(10704639-10704708)
chr3 (587-628)||(32663759-32663800)
chr3 (606-643)||(33046725-33046762)
chr3 (610-683)||(34235024-34235097)
chr3 (684-773)||(36631116-36631205)
chr3 (609-682)||(37689296-37689369)
chr3 (606-670)||(41057233-41057298)
chr3 (736-773)||(43046675-43046712)
chr3 (597-642)||(43062780-43062825)
chr3 (606-683)||(46031056-46031133)
chr3 (591-659)||(51130839-51130908)
chr3 (622-682)||(53789406-53789464)
[»] chr6 (46 HSPs)
chr6 (593-682)||(34430782-34430870)
chr6 (589-683)||(848055-848148)
chr6 (684-773)||(6909937-6910027)
chr6 (596-682)||(30926586-30926672)
chr6 (593-683)||(34910323-34910413)
chr6 (598-682)||(4163220-4163304)
chr6 (598-682)||(4224841-4224925)
chr6 (615-677)||(9559358-9559420)
chr6 (684-762)||(24626222-24626300)
chr6 (680-773)||(8147619-8147711)
chr6 (589-681)||(24626355-24626450)
chr6 (591-679)||(6538584-6538672)
chr6 (618-682)||(30536570-30536634)
chr6 (596-683)||(103496-103583)
chr6 (598-681)||(10645304-10645387)
chr6 (597-683)||(31624323-31624412)
chr6 (699-773)||(35070710-35070785)
chr6 (597-683)||(24982771-24982857)
chr6 (598-683)||(33089571-33089657)
chr6 (606-671)||(2455066-2455131)
chr6 (692-773)||(30536394-30536475)
chr6 (597-682)||(31623617-31623702)
chr6 (588-644)||(835171-835226)
chr6 (596-652)||(35069529-35069585)
chr6 (597-656)||(21405072-21405131)
chr6 (596-647)||(35070571-35070622)
chr6 (597-683)||(34404644-34404730)
chr6 (621-682)||(19411491-19411552)
chr6 (619-680)||(31813230-31813291)
chr6 (600-683)||(13907651-13907732)
chr6 (733-773)||(29754193-29754233)
chr6 (698-762)||(30536637-30536701)
chr6 (698-773)||(18076112-18076187)
chr6 (736-771)||(26550320-26550355)
chr6 (610-680)||(26559170-26559241)
chr6 (684-746)||(4163118-4163180)
chr6 (684-746)||(4224739-4224801)
chr6 (597-635)||(9202903-9202941)
chr6 (625-683)||(20368127-20368185)
chr6 (598-683)||(20861617-20861703)
chr6 (684-762)||(31623487-31623565)
chr6 (598-683)||(33080497-33080583)
chr6 (596-657)||(6909786-6909847)
chr6 (592-637)||(27924516-27924561)
chr6 (736-773)||(34430632-34430669)
chr6 (598-683)||(35099102-35099187)
[»] scaffold0057 (2 HSPs)
scaffold0057 (611-683)||(24687-24759)
scaffold0057 (606-660)||(44122-44176)
[»] scaffold0528 (1 HSPs)
scaffold0528 (615-683)||(918-986)
[»] scaffold0012 (1 HSPs)
scaffold0012 (733-773)||(207695-207735)
[»] scaffold0221 (1 HSPs)
scaffold0221 (596-646)||(22334-22384)
[»] scaffold0020 (1 HSPs)
scaffold0020 (596-629)||(159890-159923)


Alignment Details
Target: chr2 (Bit Score: 502; Significance: 0; HSPs: 83)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 502; E-Value: 0
Query Start/End: Original strand, 219 - 773
Target Start/End: Original strand, 42658751 - 42659305
Alignment:
Q  219 gcactaaaacgtttggctttgttgtcatgttgttgcagatgttgaagatttctaccgacaatgtgatcctggttagtttaatttcaatgctttctctcnn 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  42658751 gcactaaaacgtttggctttgttgtcatgttgttgcagatgttgaagatttctaccgacaatgtgatcctggttagtttaatttcaatgctttctctcaa 42658850  T
Q  319 nnnnnttatgaatttcattttgttgcttacatttgaatgctcttttatgttccaccaattttagggttcacatatttattttatgtatttgcaattggta 418  Q
         ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42658851 aaaaattatgaatttcattttgttgcttacatttgaatgctcttttatattccaccaattttagggttcacatatttattttatgtatttgcaattggta 42658950  T
Q  419 tcactgatttgtgtaatttagatgtgttgcgtatgttaattgataattcttgttctttatagctttacttgtagctttgaattctgatgtaggagatttt 518  Q
    |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  42658951 tcactgatttctgtaatttagatgtattgcgtatgttaattgataattcttgttctttatagttttacttgtagctttgaattctgatgtaggagatttt 42659050  T
Q  519 tcagccgccttttatttatcagtcaatgcggctataagcctataatgcaaaatttgtagcgtttctatgttttaggacctgtttgggttggcttatttga 618  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42659051 tcagccgccttttatttatcagtcaatgcggctataagcctataatgcaaaatttgtcgcgtttctatgttttaggacctgtttgggttggcttatttga 42659150  T
Q  619 gcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacatcttatagcatatgcaaaaacaatttcactttattt 718  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  42659151 gcttatttactggcataagttttgtgagactgtttgggagaagttttgaaaacagcttatgacatcttatagcatatacaaaaacaatttcactttattt 42659250  T
Q  719 taccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42659251 taccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 42659305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 144; E-Value: 3e-75
Query Start/End: Original strand, 7 - 162
Target Start/End: Original strand, 42658539 - 42658694
Alignment:
Q  7 acaatggaaggtcgaagtcacaccgttgagcaaatttttgatgatttcaagagccgaagaactggaatcatcaaagccctaactgccggtataatttctt 106  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  42658539 acaatggaaggtcgaagtcgcaccgttgagcaaatttttgatgatttcaagagccgaagaactggaatcatcaaagccctaaccgtcggtataatttctt 42658638  T
Q  107 gttcaatctttttgaattttggcaaaagggtttttcatttccttgcctgatctaca 162  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42658639 gttcaatctttttgaattttggcaaaagggtttttcatttccttgcctgatctaca 42658694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 680 - 760
Target Start/End: Original strand, 41812151 - 41812231
Alignment:
Q  680 acatcttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataa 760  Q
    ||||||| |||||||| |||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  41812151 acatcttgtagcatatacaaaaacaatttaacttcattttaccatttgccataaaaatagcttatgtaagcttatacataa 41812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 449986 - 449913
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||| | ||||||||||||||||||||||    
T  449986 cttatttgagcttatctactagcataagttttatgagattgtttgggaggacttttgaaaacagcttatgacat 449913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 31744451 - 31744364
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| |||||||||||| |||||||||| | |||||||||| ||||| |||||| ||||| |||||||||||||||| |||||    
T  31744451 cctgtttggattggcttatttgggcttatctaccgacataagttttctgagactgtttgagagaacttttgaaaacagcttaagacat 31744364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 12464538 - 12464627
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||| ||||||||||| | ||||| | | ||||||||||||||||||| |||||| || ||||||||||    
T  12464538 cttatagcatatacaaaaacaatttaactttattttatctttttctacagaaatagcttatgtaagcttctacatatgcacttatcatga 12464627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 590 - 679
Target Start/End: Complemental strand, 15305833 - 15305744
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||| ||||||||| |||||||||||||||||||||| || |||||||||||||| | ||||||| |||| |||||| |||| ||||||    
T  15305833 ttagggcctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatg 15305744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 589 - 682
Target Start/End: Complemental strand, 30331911 - 30331818
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||| | ||||||| ||| ||||||| ||||||||||||| |||||||||||||||| |||||||||||| || |||||| | |||||||||    
T  30331911 tttagggcttgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgaca 30331818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 41241197 - 41241286
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||| |||| |||||| | ||| | ||| ||||||||||||||||||||| ||||||||| ||||||||    
T  41241197 cttatagcatatacaaaaacaatttaacttcattttatcttttcctatagaaatagcttatgtaagcttatccataagcgcatatcatga 41241286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 683
Target Start/End: Original strand, 41812011 - 41812096
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||||||||||||||||||||| | | || |||||| |||||  |||||||||||| ||||||||||||||||||||||    
T  41812011 tgtttggattggcttatttgagcttatctgcagtcaaaagtttagtgaggctgtttgggagaacttttgaaaacagcttatgacat 41812096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 15757577 - 15757661
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||  ||| |||||||||||||| |||||||||||||||||||||| || ||||||||| || ||||||| ||||||||||    
T  15757577 tgtttggaatggtttatttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgaca 15757661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 4607078 - 4606991
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| |||||||||||||||||||||||    ||||||||||||||| | |||||||||| || |||||||| ||||||||||    
T  4607078 cctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacat 4606991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 596 - 679
Target Start/End: Original strand, 7928215 - 7928298
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||||| |||||||||||||||||||||| || |||||||| ||||||| |||| |  |||| ||||||||||||||||||    
T  7928215 cctgtttggattggcttatttgagcttatctattgacataagttgtgtgagactgttagaaagaacttttgaaaacagcttatg 7928298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 609 - 683
Target Start/End: Complemental strand, 13325710 - 13325636
Alignment:
Q  609 gcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||||| | ||  ||||||||| |||||||||| ||||||| ||||||||||||||||||||||    
T  13325710 gcttatttgagcttatcaattgatataagttttatgagattgttcgggagaacttttgaaaacagcttatgacat 13325636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 692 - 773
Target Start/End: Original strand, 42868534 - 42868615
Alignment:
Q  692 atatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||| |||||||||||| ||||||||||| | ||||| || |||||||||||||||| ||||| ||||||||| ||||||||    
T  42868534 atatacaaaaacaatttaactttattttatctttttctatgaaaatagcttatgtaaacttatgcataagcgcctatcatga 42868615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 600 - 683
Target Start/End: Original strand, 33319737 - 33319818
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||||||||||||||||| ||||||||||||||  |||||||| |||||||||||| ||||  ||| ||||||||||||    
T  33319737 tttggattggcttatttgagcttgtctactggcataag--ttgtgagactgtttgggagaacttttataaatagcttatgacat 33319818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 609 - 672
Target Start/End: Complemental strand, 21828102 - 21828039
Alignment:
Q  609 gcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    |||||||||| |||||||||||||||||||||||||||| ||||| | |||| |||||||||||    
T  21828102 gcttatttgaccttatctactggcataagttttgtgagactgtttagaagaacttttgaaaaca 21828039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 679
Target Start/End: Complemental strand, 27317532 - 27317449
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||||| ||| ||||||||||||||||||| | |||||||||| ||||| |||||| ||||| || |||||||| ||||||    
T  27317532 cctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 683
Target Start/End: Complemental strand, 42419942 - 42419859
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||| |||||||||| |||||| ||| |||||||||| ||||| |||||||||||| ||  ||||||||||||||||||    
T  42419942 tttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacat 42419859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 598 - 660
Target Start/End: Complemental strand, 3312228 - 3312166
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||||||| |||| |||||||    
T  3312228 tgtttggattggcttatttgagcttatctactgacgtaagttttgtgagactgttggggagaa 3312166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 699 - 773
Target Start/End: Complemental strand, 32592577 - 32592503
Alignment:
Q  699 aaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| || |||||||| | ||||| |||||||||| ||||| |||||||||||||||||||||| ||||    
T  32592577 aaaacaatttaacattattttatctttttctataaaaatagtttatgcaagcttatacataagcgcttataatga 32592503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 41407307 - 41407217
Alignment:
Q  684 cttatagcatatgcaaaaa-caatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||| |||||| ||||||||||| | |||   | | |||||||||||||||||||||||||||| |||||||||||    
T  41407307 cttatagcatatacaaaaaacaatttaactttattttatcttttggtacagaaatagcttatgtaagcttatacataagtgcttatcatga 41407217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 590 - 683
Target Start/End: Complemental strand, 11864059 - 11863967
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||||||||| ||||||||||||  ||||| ||||||| |||| | ||||||| ||||||||||||  |||||||||| ||||||||||    
T  11864059 ttagggcctgtttggattggcttatttggtcttatttactggc-taaggtctgtgagactgtttgggagaacatttgaaaacaacttatgacat 11863967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 599 - 683
Target Start/End: Original strand, 40682312 - 40682399
Alignment:
Q  599 gtttgggttggcttatttgagcttatctact---ggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| |||||||||||||| || ||||||   | ||||||||||||||||||||||||||||| || | |||| ||||||||||||    
T  40682312 gtttggattggcttatttgagtttgtctactactgacataagttttgtgagattgtttgggagaacttgttaaaatagcttatgacat 40682399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 684 - 772
Target Start/End: Complemental strand, 15305662 - 15305574
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatg 772  Q
    ||||||||| || |||||| ||||| || |||||||| ||||| | |||||||||||||||| ||||||||||| |||| |||| ||||    
T  15305662 cttatagcaaatacaaaaataatttaacattattttatcatttgctataaaaatagcttatgcaagcttatacacaagcacttaccatg 15305574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 23974412 - 23974496
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||| |||||||| | |||||||||| ||| || || |||||||||||| |||||| || ||||||||||||||||||    
T  23974412 tgtttggattgacttatttgggtttatctactgacatgagattagtgagattgttttggagaacttatgaaaacagcttatgaca 23974496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 606 - 678
Target Start/End: Complemental strand, 36534911 - 36534839
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||||||||||||| | ||  |||||||||||||||| ||||||||| || || ||||||||||||||    
T  36534911 ttggcttatttgagcttatatgctttcataagttttgtgagactgtttgggataacttatgaaaacagcttat 36534839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 672
Target Start/End: Complemental strand, 2142806 - 2142731
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    |||||||| ||| |||||||||| ||||||||  ||||||||||| ||||| |||||||||||| || ||||||||    
T  2142806 ctgtttggtttgacttatttgagtttatctacatgcataagttttatgagactgtttgggagaacttatgaaaaca 2142731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 684 - 762
Target Start/End: Original strand, 15757723 - 15757802
Alignment:
Q  684 cttatagcatatgcaaaa-acaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagc 762  Q
    |||||||||||| ||||| ||||||| ||||||||||| |||||||  || | ||||||||||| |||||||||||||||    
T  15757723 cttatagcatatacaaaaaacaatttaactttattttatcattttctttagatatagcttatgtgagcttatacataagc 15757802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 698 - 773
Target Start/End: Original strand, 31561832 - 31561907
Alignment:
Q  698 aaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||| ||||||||||| |||||   ||| | ||||||||||||||||||||  ||||||||||||||||    
T  31561832 aaaaacaatttaactttattttatcatttattatagatatagcttatgtaagcttatatgtaagcgcttatcatga 31561907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 590 - 672
Target Start/End: Original strand, 41241043 - 41241126
Alignment:
Q  590 ttaggacctgtttgggtt-ggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    ||||| ||||||||| || || |||||||||||||| |||| |||| |||||||||||||||||||| |||| || ||||||||    
T  41241043 ttagggcctgtttggttttggattatttgagcttatttactcgcatgagttttgtgagattgtttggtagaacttgtgaaaaca 41241126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 618 - 682
Target Start/End: Original strand, 43279466 - 43279532
Alignment:
Q  618 agcttatctactggcataagttttgtgagattgtttgg--gagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||| ||||||||||||||||| |||||||  ||||| || ||||||||||||||||||    
T  43279466 agcttatctactagcataagttttgtgagactgtttgggagagaatttatgaaaacagcttatgaca 43279532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 684 - 762
Target Start/End: Complemental strand, 2227171 - 2227093
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagc 762  Q
    |||||| ||||  |||||||||||| | ||||||||| | ||| ||||| |||||||||||||||||| ||||||||||    
T  2227171 cttataacatacacaaaaacaattttattttattttatcttttaccatagaaatagcttatgtaagctcatacataagc 2227093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 657
Target Start/End: Original strand, 15370240 - 15370302
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttggga 657  Q
    ||||||||| ||| ||||||||||||||||||||||||||||  ||||||||| |||||||||    
T  15370240 cctgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttggga 15370302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 39659426 - 39659512
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| |||||||  |||||||||||||||| ||||||||| |||||  ||| || ||||| ||  |||||||||||||||||    
T  39659426 cctgtttggattggcttgcttgagcttatctactgacataagtttcgtgaggctgtctgagagaacttacgaaaacagcttatgaca 39659512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 10490634 - 10490545
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| || ||||||||| || |||||||||||||| | || ||||| ||||||  || |||  |||||||||||||||||||    
T  10490634 cttatagcatatacagaaacaatttaacgttattttaccatttgctatcaaaattgcttatcaaaacttccacataagcgcttatcatga 10490545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 608 - 677
Target Start/End: Original strand, 38916238 - 38916307
Alignment:
Q  608 ggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctta 677  Q
    |||||||||||||||||||||  ||||| |||||||||| |||||| |||||| || |||||| ||||||    
T  38916238 ggcttatttgagcttatctaccagcataggttttgtgaggttgtttaggagaacttatgaaaaaagctta 38916307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 591 - 660
Target Start/End: Original strand, 42868393 - 42868462
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    |||| ||||||||| ||| |||||||||||||||||| ||||||| |||| |||| | ||||||||||||    
T  42868393 tagggcctgtttggattgccttatttgagcttatctattggcatacgtttcgtgacactgtttgggagaa 42868462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 691 - 772
Target Start/End: Complemental strand, 45229510 - 45229429
Alignment:
Q  691 catatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatg 772  Q
    ||||| |||||||||||| || | |||||| | ||| | ||| ||||||||||||||| ||||||||||||| |||||||||    
T  45229510 catatacaaaaacaatttaacctcattttatcgtttgctatagaaatagcttatgtaaacttatacataagcacttatcatg 45229429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 679
Target Start/End: Original strand, 26143559 - 26143640
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||||| ||||||| ||||||||||||||||| ||||| |||  ||||| |||||||||||| ||  ||||||| ||||||    
T  26143559 cctgtttggattggcttgtttgagcttatctactgacataaattt--tgagactgtttgggagaacttacgaaaacaacttatg 26143640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 682
Target Start/End: Complemental strand, 26202187 - 26202095
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||| ||||||||| ||  ||||||||| ||||||| ||| |||||||||||||||||| ||||  |||| || ||| |||| |||||||||    
T  26202187 ttagggcctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgaca 26202095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 681
Target Start/End: Original strand, 31561664 - 31561744
Alignment:
Q  601 ttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    |||| ||| |||||||||| |||||||||  |||||||||||| | | ||||||||| || ||||||||||||| ||||||    
T  31561664 ttggattgacttatttgagattatctactaacataagttttgtaaaactgtttgggaaaacttttgaaaacagcatatgac 31561744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 600 - 683
Target Start/End: Complemental strand, 40158867 - 40158783
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||||||||||||||| ||||||||| ||||||   |||||||| || ||||| ||| || |||||||||||||||||||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacat 40158783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 608 - 683
Target Start/End: Complemental strand, 750811 - 750736
Alignment:
Q  608 ggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||| |||||| |||||||| ||||||||||| ||||||  |||| || |||||| |||| |||||||    
T  750811 ggcttatttgagtttatctcctggcatatgttttgtgagagtgtttgcaagaacttatgaaaagagctaatgacat 750736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 698 - 773
Target Start/End: Complemental strand, 10258667 - 10258592
Alignment:
Q  698 aaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||  ||||||||||| ||||| ||| |||| || ||||||||| ||||||||||||| ||| ||||||    
T  10258667 aaaaacaattgaactttattttatcatttcccacaaaactaccttatgtaaccttatacataagcacttgtcatga 10258592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 734 - 773
Target Start/End: Complemental strand, 11863886 - 11863847
Alignment:
Q  734 aaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  11863886 aaatagcttatgtaagcttatgcataagcgcttatcatga 11863847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 45229664 - 45229577
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| |||| | ||||||||||||||||||||||||||| ||  | |  ||||||||||| || |||||| | ||||||||||    
T  45229664 cctgtttggattggttgatttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacat 45229577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 787483 - 787397
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| |||| ||||| |||| ||||||||||||||||   |||||| | |||||| ||||| || |||||||||||||||||||    
T  787483 tgtttggattggattattcgagcatatctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacat 787397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 699 - 773
Target Start/End: Complemental strand, 13325560 - 13325486
Alignment:
Q  699 aaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||| ||||| ||||||||||| ||||||| |||||| |||||||||| | || ||||||||| ||||| |||||    
T  13325560 aaaataatttaactttattttatcattttctataaaactagcttatgttacctcatacataagtgcttaacatga 13325486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 647
Target Start/End: Complemental strand, 18179101 - 18179051
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgaga 647  Q
    |||||||| ||| ||||||||||||||||||||  ||||||||||||||||    
T  18179101 ctgtttggattgacttatttgagcttatctactaacataagttttgtgaga 18179051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 592 - 638
Target Start/End: Complemental strand, 33942063 - 33942017
Alignment:
Q  592 aggacctgtttgggttggcttatttgagcttatctactggcataagt 638  Q
    |||| |||||||| |||||||||||||| ||||||||||||||||||    
T  33942063 aggatctgtttggattggcttatttgaggttatctactggcataagt 33942017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 683
Target Start/End: Complemental strand, 43036708 - 43036622
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||  |||| ||||||||||||||||| |  |||||||||||||||| | ||||||| || || ||| |||| ||||||||||    
T  43036708 ctgtttgtattggattatttgagcttatctagttacataagttttgtgagagtatttgggaaaacttatgagaacatcttatgacat 43036622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 43279594 - 43279681
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||  ||||||||||||||| |||||||| | |||   |||||||||||||||| ||||||| | || |||||||| |||||    
T  43279594 cttatagcata--caaaaacaatttcacattattttatcttttgatataaaaatagcttatgcaagcttagaaattagcgcttaacatga 43279681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 657
Target Start/End: Original strand, 12464394 - 12464451
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttggga 657  Q
    ||||| ||||||||||||||  ||||||||  |||||||||||||||| |||||||||    
T  12464394 tttggtttggcttatttgagtgtatctactaacataagttttgtgagaatgtttggga 12464451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 683
Target Start/End: Complemental strand, 18066259 - 18066194
Alignment:
Q  618 agcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||| |||||||||||||| | ||||| | | || || |||||||||||||||||||    
T  18066259 agcttatctactgacataagttttgtgaaactgttttgtacaacttatgaaaacagcttatgacat 18066194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 679
Target Start/End: Complemental strand, 20952506 - 20952425
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||| ||| ||||||||||||||| |||||||| ||||||||| ||| | |||  ||||| || ||||||||| |||||    
T  20952506 tgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatg 20952425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 771
Target Start/End: Original strand, 22971609 - 22971669
Alignment:
Q  710 actttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    ||||||||||| | ||||| ||| ||||||||||| |||||||||||| |||||||||||||    
T  22971609 actttattttatc-ttttctatagaaatagcttatataagcttatacacaagcgcttatcat 22971669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 647
Target Start/End: Original strand, 29628673 - 29628710
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgaga 647  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  29628673 cttatttgagcttatctactgtcataagttttgtgaga 29628710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 41851540 - 41851451
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||| |||||||| || | ||| | ||| ||||| ||  |||||||||||| ||||||| ||| |||||    
T  41851540 cttatagcatatacaaaaacaatttaactttattgtatcttttcctatataaatatctcgtgtaagcttatatataagcgtttagcatga 41851451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 595 - 660
Target Start/End: Complemental strand, 44119936 - 44119871
Alignment:
Q  595 acctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    |||||||||| ||||||||||||||||||  | ||| |||||||||||||| | |||||| |||||    
T  44119936 acctgtttggattggcttatttgagcttacatgctgacataagttttgtgaaactgtttgagagaa 44119871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 597 - 680
Target Start/End: Complemental strand, 8017586 - 8017502
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    |||||||| ||| |||||||||| ||||||| || ||||||   ||||| |||| |||||||||| || ||||||||||||||||    
T  8017586 ctgtttggattgacttatttgaggttatctattgacataagcacttgtgcgattatttgggagaacttatgaaaacagcttatga 8017502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 610 - 654
Target Start/End: Complemental strand, 9174954 - 9174910
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttg 654  Q
    |||||||||||||||||| ||||||||||| ||||||| ||||||    
T  9174954 cttatttgagcttatctattggcataagttatgtgagactgtttg 9174910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 591 - 679
Target Start/End: Original strand, 10619132 - 10619220
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||| ||||||||| ||| || ||||||| |||||||||| || |||||||||||||    ||||||||| |  |||||||||||||||    
T  10619132 tagggcctgtttggattgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatg 10619220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 679
Target Start/End: Original strand, 12313090 - 12313174
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||||  || |||||||||| |||| | ||| |||||||   ||||||||||||||||||||| || |||||||||||||||    
T  12313090 cctgtttgtattagcttatttgatcttacccactagcataagcacttgtgagattgtttgggagaatttatgaaaacagcttatg 12313174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 610 - 682
Target Start/End: Complemental strand, 24101067 - 24100995
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||||| || |  |||||||||||||||| |||||||||||| || || ||||| |||||||||    
T  24101067 cttatttgaacttatatattatcataagttttgtgagactgtttgggagaacttatggaaacaccttatgaca 24100995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 592 - 683
Target Start/End: Original strand, 28677572 - 28677664
Alignment:
Q  592 aggacctgtttgggttggcttatttgagcttatctactggcataagttttg-tgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||| |||||||| |||  || ||||||||||| |||| ||||||||  || | ||| |||||||||||| || |||||||||||||||||||    
T  28677572 aggatctgtttggattgatttttttgagcttatttacttgcataagtactgctaagactgtttgggagaacttatgaaaacagcttatgacat 28677664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 683
Target Start/End: Original strand, 41293095 - 41293167
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| |||||  ||||| || |||||||||||| | |||||||||| || | |||||||||||||||||    
T  41293095 ttatttgaccttataaactggtattagttttgtgagactatttgggagaacttataaaaacagcttatgacat 41293167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 614 - 682
Target Start/End: Complemental strand, 41851670 - 41851602
Alignment:
Q  614 tttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||| || || ||||||||||||| || ||||||||| || || ||||| |||||||||    
T  41851670 tttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgaca 41851602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 600 - 676
Target Start/End: Complemental strand, 44590173 - 44590097
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    ||||| |||||||||||||| |||||||  | ||||||||||||||||  |||||  |||| || ||||||||||||    
T  44590173 tttggattggcttatttgagtttatctatagacataagttttgtgagaccgtttgaaagaacttatgaaaacagctt 44590097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 640 - 683
Target Start/End: Complemental strand, 1801776 - 1801733
Alignment:
Q  640 ttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  1801776 ttgtgatattgtttgggagaacttatgaaaacagcttatgacat 1801733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 730 - 773
Target Start/End: Complemental strand, 26201987 - 26201944
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||||||| ||||||||| ||||| |||||||||||    
T  26201987 ataaaaatagcttatgcaagcttatatataagggcttatcatga 26201944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 672
Target Start/End: Original strand, 1633431 - 1633493
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    |||||||||| ||||||||| ||||||||||||| | | |||| ||||||| || ||||||||    
T  1633431 cttatttgagtttatctactagcataagttttgttatactgttagggagaacttatgaaaaca 1633493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 613 - 683
Target Start/End: Original strand, 19608567 - 19608637
Alignment:
Q  613 atttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| |||||||||| |||| ||||| ||||| |||||| ||||| || | || ||||||||||||||    
T  19608567 atttgagtttatctactgacataggttttatgagactgtttgcgagaacttataaacacagcttatgacat 19608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 637
Target Start/End: Complemental strand, 29936186 - 29936140
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataag 637  Q
    |||| ||||||||| |||||||||||||||| |||| ||||||||||    
T  29936186 tagggcctgtttggattggcttatttgagctcatcttctggcataag 29936140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 33503151 - 33503072
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||  |||||||||||||||||||||||| |||||||         |||||||||||||| || ||||| |||||||||||||    
T  33503151 cctgtttgtattggcttatttgagcttatctactagcataag--------cattgtttgggagaatttatgaaatcagcttatgacat 33503072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 652
Target Start/End: Complemental strand, 36125510 - 36125456
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtt 652  Q
    ||||||| || | ||||||||| ||||||||||||||||||| ||||||| ||||    
T  36125510 tgtttggattcgtttatttgagtttatctactggcataagttctgtgagagtgtt 36125456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 636
Target Start/End: Original strand, 40837356 - 40837394
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataa 636  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  40837356 tgtttggattggcttatttgagcttatctactgacataa 40837394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 3312049 - 3311960
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||  ||||| |||||  ||||||||||| |  || |  |||||| |||||||||| |||||||||||||| ||| ||||||    
T  3312049 cttatagcatacacaaaaccaattcaactttattttatcccttgctgtaaaaacagcttatgtatgcttatacataagcacttttcatga 3311960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 12795797 - 12795708
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| ||| |||||||  | |||| || | | ||||| || ||||||||||||||||||||||  | ||| |||||||||||    
T  12795797 cttatagcatatacaagaacaattaaaatttacttaatccttttctatcaaaatagcttatgtaagcttatgaaaaagtgcttatcatga 12795708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 769
Target Start/End: Original strand, 23974595 - 23974640
Alignment:
Q  724 ttttccataaaaatagcttatgtaagcttatacataagcgcttatc 769  Q
    ||||| |||||||||||||| |||||||||| |||||| |||||||    
T  23974595 ttttctataaaaatagcttaagtaagcttatgcataagtgcttatc 23974640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 647
Target Start/End: Original strand, 28330241 - 28330278
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgaga 647  Q
    |||||| |||||||||||||||| ||||||||||||||    
T  28330241 cttattagagcttatctactggcgtaagttttgtgaga 28330278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 32592741 - 32592653
Alignment:
Q  596 cctgtttgggttggcttat--ttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| |||||||||  || |||||||||  |||||||||||||| |||  | |||||||||| || |||||| |||||| ||||    
T  32592741 cctgtttggattggcttatatttaagcttatctgatggcataagttttgggagtctatttgggagaacttatgaaaatagcttacgaca 32592653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 619 - 683
Target Start/End: Complemental strand, 32837453 - 32837388
Alignment:
Q  619 gcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| ||| ||||||  |||||||| |||||||||||| || |||||||||||||| ||||    
T  32837453 gcttatctagtggtataagtacttgtgagactgtttgggagaacttatgaaaacagcttataacat 32837388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 1e-34; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 580 - 773
Target Start/End: Complemental strand, 46078267 - 46078063
Alignment:
Q  580 tttctatgttttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||||||| ||| |||| |||| ||||||||||| |||||||||| || ||||||||||||| | ||||| |||||||||| ||||||||||||||     
T  46078267 tttctatgttt-agggcctggttggattggcttattttagcttatctattgacataagttttgtgggtttgttcgggagaagttatgaaaacagcttata 46078169  T
Q  680 acat----------cttatagcatatg--caaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgctta 767  Q
    || |          ||||||||||||   |||||||||||| ||||| ||||| | ||||| ||||||||| ||||||||||||||||||||||||||||    
T  46078168 acttatgtaaacaacttatagcatatatacaaaaacaatttaactttgttttatctttttctataaaaataacttatgtaagcttatacataagcgctta 46078069  T
Q  768 tcatga 773  Q
    ||||||    
T  46078068 tcatga 46078063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 590 - 682
Target Start/End: Original strand, 19302474 - 19302566
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||| |||||||||  ||| ||||||||||||||||||||| |||||||||||||||| | |||||||||| || ||||||||||||||||||    
T  19302474 ttagaacctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgaca 19302566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 5947394 - 5947307
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| |||||||||||||||||||||| ||| ||||||||| ||||| ||||||| |||| |||||||| |||||||||||||    
T  5947394 cctgtttggattggcttatttgagcttatctattggtataagttttatgagactgtttggaagaacttttgaaaccagcttatgacat 5947307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 596 - 679
Target Start/End: Complemental strand, 48470197 - 48470114
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||||| || ||||||||||||||||||||||  | |||||||||| |||||||||||||||||| || |||||||||||||||    
T  48470197 cctgttaggattggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatg 48470114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 618 - 682
Target Start/End: Original strand, 19022524 - 19022588
Alignment:
Q  618 agcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| || |||||||| |||||||||    
T  19022524 agcttatctactgacatgagttttgtgagattgtttgggagaatttatgaaaacaacttatgaca 19022588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 608 - 676
Target Start/End: Original strand, 27863654 - 27863722
Alignment:
Q  608 ggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    |||||||||||||||||| ||||||||||||||||||||| | |||| ||||| || ||||||||||||    
T  27863654 ggcttatttgagcttatccactggcataagttttgtgagactatttgagagaacttatgaaaacagctt 27863722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 684 - 772
Target Start/End: Original strand, 30570996 - 30571084
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatg 772  Q
    |||||||||||| |||||| ||||| ||||||||||||| ||  | ||| || ||||||||||||||||||||||| || |||||||||    
T  30570996 cttatagcatatacaaaaataatttaactttattttacctttcgctatataagtagcttatgtaagcttatacatatgcacttatcatg 30571084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 45264100 - 45264009
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaa--tagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||| ||||||||| | | ||||| |||||||  |||||||||||||||||| | ||||||||| ||||||    
T  45264100 cttatagcatatacaaaaacaatttaactttatttcatctttttctataaaaaaatagcttatgtaagcttatgcgtaagcgcttttcatga 45264009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 679
Target Start/End: Original strand, 4970709 - 4970792
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||||| ||| |||||||||||||||||  || ||||||| |||||||| |||||||||||| || |||||||| ||||||    
T  4970709 cctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatg 4970792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 611 - 682
Target Start/End: Original strand, 33601342 - 33601413
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||||||| ||||||||||||||||||| | |||  ||||| || ||||||||||||||||||    
T  33601342 ttatttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgaca 33601413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 606 - 682
Target Start/End: Complemental strand, 420503 - 420427
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||||||||| ||||||||| |||| ||||||||| |||||||||||| || ||||||||  ||||||||    
T  420503 ttggcttctttgagcttgtctactggcttaagctttgtgagactgtttgggagaacttatgaaaacaatttatgaca 420427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 592 - 683
Target Start/End: Original strand, 3836596 - 3836688
Alignment:
Q  592 aggacctgtttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||||| ||| ||||||||||||||||||||||| ||||   |||||| | |||||||||||| || |||||| ||||||||||||    
T  3836596 aggacctatttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat 3836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 684 - 772
Target Start/End: Original strand, 4970858 - 4970941
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatg 772  Q
    |||||||||||| ||||||||||||     ||||||| | ||| | ||| ||||||||||||||||||||||||||| |||||||||||    
T  4970858 cttatagcatatacaaaaacaattt-----tattttatcttttgctatagaaatagcttatgtaagcttatacataaccgcttatcatg 4970941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 676
Target Start/End: Complemental strand, 36517737 - 36517650
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    |||||| ||||||||| ||   ||||||||||||| ||||||||||||||||| | ||| |||||||||||| || | ||||||||||    
T  36517737 tttagggcctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagctt 36517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 684 - 766
Target Start/End: Complemental strand, 420365 - 420283
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgctt 766  Q
    |||||||||||| |||||||||||  || |||||||| | ||| | ||||| |||||||||| |||||||||||||| |||||    
T  420365 cttatagcatatacaaaaacaattgaacattattttatcttttgctataaacatagcttatgcaagcttatacataaacgctt 420283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 17944260 - 17944346
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||  || ||||||| |||||||||||||||||||| ||||||||| |||||  || || || | ||||||||||||||||    
T  17944260 cctgtttggagtgacttatttaagcttatctactggcataagctttgtgagactgtttcagacaacttataaaaacagcttatgaca 17944346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 620 - 674
Target Start/End: Original strand, 19214347 - 19214401
Alignment:
Q  620 cttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagc 674  Q
    |||||||||  |||||||||||||||||||||||||||||| || ||||||||||    
T  19214347 cttatctacatgcataagttttgtgagattgtttgggagaacttatgaaaacagc 19214401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 20234603 - 20234549
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||||||||||||| |||| ||||||||||||||||| | ||||||||||    
T  20234603 ttggcttatttgagcttatatacttgcataagttttgtgagactttttgggagaa 20234549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 590 - 676
Target Start/End: Complemental strand, 48140361 - 48140276
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    ||||| ||||||||| |||||||||  ||| ||||||| ||||||||||| ||||||| ||||||||||||  | ||||||||||||    
T  48140361 ttagggcctgtttggattggcttata-gagtttatctattggcataagttatgtgagactgtttgggagaatgtatgaaaacagctt 48140276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 611 - 660
Target Start/End: Complemental strand, 18765422 - 18765373
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||||||    
T  18765422 ttatttgagcttatctattgacataagttttgtgagactgtttgggagaa 18765373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 683
Target Start/End: Complemental strand, 33678923 - 33678846
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||| | |||||||||| |||||||||||||||||   |||||||||| || |||||||| ||||| ||||    
T  33678923 ttggcttatttaaacttatctacttgcataagttttgtgagacaatttgggagaacttatgaaaacaacttataacat 33678846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 618 - 683
Target Start/End: Original strand, 44776918 - 44776983
Alignment:
Q  618 agcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||  |||||||||||||||||| |||||||||| || | |||||||| ||||||||    
T  44776918 agcttatctactaccataagttttgtgagattatttgggagaacttgttaaaacagcatatgacat 44776983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 596 - 653
Target Start/End: Complemental strand, 44822111 - 44822054
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgttt 653  Q
    ||||||||| ||| |||||||||| |||||| ||| ||||||||||||||||||||||    
T  44822111 cctgtttggattgacttatttgagtttatctgctgacataagttttgtgagattgttt 44822054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 600 - 660
Target Start/End: Complemental strand, 9210970 - 9210910
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||| ||| |||||||||||||||||||||  ||||||||| ||||| ||||||||||||    
T  9210970 tttggattgacttatttgagcttatctactgatataagttttctgagactgtttgggagaa 9210910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 11619077 - 11619161
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||  ||| |  | ||||||||| || |||||||| |||||||||    
T  11619077 tgtttggattggcttatttgagcttatctactgacataagcttcatgaaacagattgggagaatttatgaaaacaacttatgaca 11619161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 598 - 666
Target Start/End: Original strand, 22283565 - 22283633
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttg 666  Q
    ||||||| ||| ||||||||| ||||||||||| ||||| |||||||||| ||||| |||||| |||||    
T  22283565 tgtttggattgacttatttgaacttatctactgtcataaattttgtgagactgtttaggagaacttttg 22283633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 600 - 660
Target Start/End: Complemental strand, 45338602 - 45338542
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||| |||||||||||||| ||||| ||| ||||||||||| ||||| ||||||||||||    
T  45338602 tttggattggcttatttgagtttatccactagcataagttttttgagactgtttgggagaa 45338542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 45593682 - 45593594
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatct-actggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| |||||||||||||| |||| | |||| |||||| ||||||||| |||||||||||| || | |||||| || |||||||    
T  45593682 cctgtttggattggcttatttgagtttatattactgacataagctttgtgagactgtttgggagaacttataaaaacatctgatgacat 45593594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 590 - 637
Target Start/End: Complemental strand, 1418578 - 1418531
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataag 637  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||||||||    
T  1418578 ttaggacttgtttggattgacttatttgagcttatctactggcataag 1418531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 591 - 682
Target Start/End: Original strand, 3927922 - 3928013
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||| ||| ||||| | ||||||||||||  |||||||| ||||||||||||||||| | |||| ||||| |||| ||||||  ||||||||    
T  3927922 tagggcctatttggatcggcttatttgaggctatctactagcataagttttgtgagactatttgagagaattttttaaaacaatttatgaca 3928013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 710 - 773
Target Start/End: Complemental strand, 20428446 - 20428383
Alignment:
Q  710 actttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||| ||||| | ||||||  | ||||||||| ||||||||||||||||||||||||    
T  20428446 actttattttatcatttccaataaaaccaccttatgtaaccttatacataagcgcttatcatga 20428383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 730 - 773
Target Start/End: Original strand, 21568739 - 21568782
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||||||| ||||||||||||||| |||||||||||    
T  21568739 ataaaaatagcttatgcaagcttatacataagtgcttatcatga 21568782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 615 - 682
Target Start/End: Original strand, 33601963 - 33602030
Alignment:
Q  615 ttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||||||||||||||||| ||||| | |||  || || || ||||||||||||||||||    
T  33601963 ttgagcttatctactggcataagttttatgagactcttttcgaaaacttatgaaaacagcttatgaca 33602030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 25596185 - 25596099
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||  || |||||||||||||||||||  |||||||  ||||||||||||| |||| ||  | | ||||||||||||||||    
T  25596185 cctgtttggactgacttatttgagcttatctaccagcataagcattgtgagattgttagggaaaacctataaaaacagcttatgaca 25596099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 33128904 - 33128819
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||| ||||||||||||||| | ||  | |||||||||| ||||||||||||| ||||| ||||||| ||| ||||||    
T  33128904 cctgtttggattgacttatttgagcttatatgctaacttaagttttgtaagattgtttggga-aagttatgaaaactgctgatgaca 33128819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 33266405 - 33266467
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||| ||| ||||||||||||||||||| | |||||||||||||| | | ||||||||||    
T  33266405 tgtttggattgacttatttgagcttatctaccgacataagttttgtgaaactatttgggagaa 33266467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 730 - 768
Target Start/End: Complemental strand, 48140175 - 48140137
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttat 768  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  48140175 ataaaaatagcttatgcaagcttatacataagcgcttat 48140137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 773
Target Start/End: Complemental strand, 9210593 - 9210544
Alignment:
Q  724 ttttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||| |||||| ||||||||| ||||||||||||||||| |||||||||    
T  9210593 ttttctataaaagtagcttatgcaagcttatacataagcgattatcatga 9210544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 733 - 766
Target Start/End: Original strand, 17983715 - 17983748
Alignment:
Q  733 aaaatagcttatgtaagcttatacataagcgctt 766  Q
    ||||||||||||||||||||||||||||||||||    
T  17983715 aaaatagcttatgtaagcttatacataagcgctt 17983748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 640
Target Start/End: Original strand, 40252035 - 40252084
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataagttt 640  Q
    |||| ||||||||  |||||||||||||||||||||||| ||||||||||    
T  40252035 tagggcctgtttgaattggcttatttgagcttatctactagcataagttt 40252084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 675
Target Start/End: Complemental strand, 21196406 - 21196342
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagct 675  Q
    |||||||||||||| |||| ||||||||||||||||| ||||| | |||| || || ||||||||    
T  21196406 ttatttgagcttatatactagcataagttttgtgagactgtttagaagaatttatgcaaacagct 21196342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 660
Target Start/End: Complemental strand, 39907954 - 39907890
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||| |||| | |||||||||||| ||| || ||||||||||||||| |||||| |||||    
T  39907954 cctgtttggattggttcatttgagcttatatacagggataagttttgtgagactgtttgagagaa 39907890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 596 - 679
Target Start/End: Original strand, 40687464 - 40687547
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||| | ||||||||||| ||||||| |||| ||||||  ||||||||| |||||| ||||| || |||||| | ||||||    
T  40687464 cctgttttgattggcttattttagcttatatactagcataatgtttgtgagactgtttgagagaacttatgaaaaaatcttatg 40687547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 773
Target Start/End: Original strand, 45806556 - 45806631
Alignment:
Q  698 aaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||| || |||||||  | ||| | ||||| |||||||||| ||||||||||||||| |||||| ||||    
T  45806556 aaaaacaatttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataagtgcttattatga 45806631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 660
Target Start/End: Original strand, 46280210 - 46280261
Alignment:
Q  609 gcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||||| |||||| ||| |||| ||||||||||| ||||||||||||    
T  46280210 gcttatttgagtttatctgctgacatatgttttgtgagactgtttgggagaa 46280261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 672
Target Start/End: Complemental strand, 46407385 - 46407310
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    ||||| || |||||||| |||||||||||||||| ||||||||||| || | |  ||||||||| || ||||||||    
T  46407385 ctgttaggattggcttaattgagcttatctactgccataagttttgggaaactacttgggagaacttatgaaaaca 46407310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 8094445 - 8094371
Alignment:
Q  610 cttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||||| |||||||   |||||||| | |||| ||||  || |||||||||||||||||||    
T  8094445 cttatttgagcttatctactagcataagcacttgtgagactatttgagagattttatgaaaacagcttatgacat 8094371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 672
Target Start/End: Original strand, 11782962 - 11783036
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    ||||||| ||| |||||||||| ||||||||||   ||||||| |||||| || || |||||| |||||||||||    
T  11782962 tgtttggattgacttatttgagattatctactgatgtaagtttagtgagactgattaggagaacttttgaaaaca 11783036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 591 - 669
Target Start/End: Original strand, 18962495 - 18962573
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaa 669  Q
    |||| ||||||||| |||  ||||| || ||||||||||| |||||||||||| ||| ||||| |||||| || |||||    
T  18962495 tagggcctgtttggattgagttattcgatcttatctactgacataagttttgttagactgttttggagaacttatgaaa 18962573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 683
Target Start/End: Complemental strand, 34036069 - 34035983
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||  ||| ||||||||||||||||||||| |||| || |||||||| |  |||| |||| || |||||| | ||||||||||    
T  34036069 ctgtttgaattgacttatttgagcttatctactgacatatgtattgtgagactacttggaagaacttatgaaaataacttatgacat 34035983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 592 - 682
Target Start/End: Complemental strand, 34744185 - 34744095
Alignment:
Q  592 aggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||  |||  | |||||||||||||||||  |||||| ||||||||| ||||||| |||| |  |||||| | |||||||||    
T  34744185 aggacctgtttgaattgaataatttgagcttatctactaacataagatttgtgagactgtttggaagaactaatgaaaagaacttatgaca 34744095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 671
Target Start/End: Original strand, 37064386 - 37064460
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaac 671  Q
    |||||||| ||| ||||||||| |||||||||||  ||||||| ||| |||||||| ||||| | || |||||||    
T  37064386 ctgtttggattgacttatttgatcttatctactgatataagttctgttagattgttcgggagcacttatgaaaac 37064460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 599 - 680
Target Start/End: Complemental strand, 49020019 - 49019937
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagtt-ttgaaaacagcttatga 680  Q
    |||||| ||| ||||||  ||||||||| ||| |||| ||||||||||| |||||||||||| || | ||||| |||||||||    
T  49020019 gtttggattgacttattgtagcttatctgctgacatatgttttgtgagactgtttgggagaacttgtggaaaaaagcttatga 49019937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 601 - 677
Target Start/End: Complemental strand, 32410688 - 32410611
Alignment:
Q  601 ttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagctta 677  Q
    |||| |||||||||||||||||||||| |||||||||  ||||||| | ||||| | | || || |||||||||||||    
T  32410688 ttggattggcttatttgagcttatctattggcataagcatttgtgaaactgttttgaataacttatgaaaacagctta 32410611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 704 - 773
Target Start/End: Complemental strand, 33128742 - 33128673
Alignment:
Q  704 aatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||| ||||||||||| |  |||| ||||||||| | || |||||||||| ||||||| ||||||||||    
T  33128742 aatttaactttattttatctctttctataaaaataacgtaagtaagcttatgcataagcacttatcatga 33128673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 749
Target Start/End: Original strand, 40252172 - 40252237
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaag 749  Q
    |||||| ||||| ||||||| |||| ||||| ||||| ||||| | |||||| |||||||||||||    
T  40252172 cttataacatatacaaaaacgatttaactttgttttatcatttgcaataaaactagcttatgtaag 40252237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 70)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 588 - 682
Target Start/End: Original strand, 16937792 - 16937886
Alignment:
Q  588 ttttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||| ||||||| |||| || ||||||||||||||||||    
T  16937792 tttttggacctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgaca 16937886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 10640106 - 10640019
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| || ||||||||||| |||||||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  10640106 cctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacat 10640019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 596 - 683
Target Start/End: Original strand, 12433090 - 12433177
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||| |||||| |||||| |||||    
T  12433090 cctgtttggattggcttatttgaacttatttactggcataggttttgtgagattgtttgggagaagttatgaaaatagcttacgacat 12433177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 41419470 - 41419385
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||| |||||||||||| |||||||| ||||| |||||||||||||||||||| || || |||||||||||||||||||    
T  41419470 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgacat 41419385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 596 - 668
Target Start/End: Original strand, 19460243 - 19460315
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaa 668  Q
    ||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  19460243 cctgtttaggttggctcatttgagtttatctactggcataagtttagtgagattgtttgggagaacttttgaa 19460315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 681
Target Start/End: Complemental strand, 41534589 - 41534506
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    ||||||| ||| |||||||||||| |||||||| ||||| |||||||||||||||||||| || || |||||||||||||||||    
T  41534589 tgtttggattgacttatttgagctaatctactgacataaattttgtgagattgtttgggataacttgtgaaaacagcttatgac 41534506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 598 - 689
Target Start/End: Complemental strand, 43301029 - 43300938
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacatcttata 689  Q
    ||||||| ||||||||||||||||||| || ||||||||||||| ||||| |||| |||||||||| | |||||||| |||||||| |||||    
T  43301029 tgtttggattggcttatttgagcttatataatggcataagttttatgagactgttggggagaagttataaaaacagcctatgacattttata 43300938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 685 - 768
Target Start/End: Complemental strand, 35446059 - 35445975
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagc-ttatacataagcgcttat 768  Q
    ||||||| ||| |||||||||||| ||||||||||| ||||| | ||||||||||||||||||||| |||||||| |||||||||    
T  35446059 ttatagcgtatacaaaaacaatttaactttattttatcatttgctataaaaatagcttatgtaagctttatacattagcgcttat 35445975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 7705915 - 7706001
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||| ||||||||||| |||||||| |||||||||||||||   | |||||||||| || ||||||||||||||||||    
T  7705915 cctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgaca 7706001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 683
Target Start/End: Original strand, 34736446 - 34736531
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||| |||||||||||||||||  || ||||||||||||||||  ||||||||||| ||||||| |||||| |||||||    
T  34736446 tgtttggattgacttatttgagcttatctggtgacataagttttgtgagacagtttgggagaacttttgaacacagctaatgacat 34736531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 598 - 675
Target Start/End: Complemental strand, 39594958 - 39594881
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagct 675  Q
    ||||||| ||| ||||||||||||||||||| | |||||||||||| ||||||||||||| || || |||||||||||    
T  39594958 tgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagct 39594881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 606 - 670
Target Start/End: Complemental strand, 15015986 - 15015922
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaa 670  Q
    ||||||||||||||||||||||||| |||||| ||||||||| |||||||||||| || ||||||    
T  15015986 ttggcttatttgagcttatctactgacataagctttgtgagactgtttgggagaacttatgaaaa 15015922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 684
Target Start/End: Complemental strand, 15246986 - 15246898
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacatc 684  Q
    ||||||||| || | |||||||||||||||||||| |||||||||| | ||| |||||||||||| || ||||| || |||||||||||    
T  15246986 cctgtttggatttgtttatttgagcttatctactgacataagttttattagaatgtttgggagaacttatgaaagcaacttatgacatc 15246898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 606 - 681
Target Start/End: Complemental strand, 3520720 - 3520645
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    |||||||||||||||| ||||||| | ||||||| ||||||| |||||||||||| || |||||||| ||||||||    
T  3520720 ttggcttatttgagctcatctactagtataagttgtgtgagactgtttgggagaacttatgaaaacatcttatgac 3520645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 599 - 682
Target Start/End: Complemental strand, 9107240 - 9107157
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||| ||| |||||||||| ||||||| || |||||||||||||||| |||||||||||| |  ||||||||||||| ||||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggaca 9107157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 42100464 - 42100377
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| | |||||||||||||||||||| |||||||| ||||||| || ||| || ||||| || |||||| ||||||||||||    
T  42100464 cctgtttggatgggcttatttgagcttatctattggcataaattttgtgtgactgtgtgagagaacttgtgaaaatagcttatgacat 42100377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 610 - 660
Target Start/End: Complemental strand, 12425712 - 12425662
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  12425712 cttatttgagcttatctactgtcataagttttgtgagactgtttgggagaa 12425662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 606 - 672
Target Start/End: Complemental strand, 32372755 - 32372689
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    ||||||||||||  |||||||||||||||||||||||||||| ||||||| |||| |||| ||||||    
T  32372755 ttggcttatttggccttatctactggcataagttttgtgagactgtttggaagaactttttaaaaca 32372689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 11700313 - 11700228
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| || ||||||||||||||||| ||||||||||||||||||||| |||||   |||| || || ||||| ||||||||||    
T  11700313 tgtttggatttgcttatttgagcttatccactggcataagttttgtgagactgtttcacagaacttatggaaacaacttatgacat 11700228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 597 - 676
Target Start/End: Original strand, 1773024 - 1773101
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    |||||||| ||||||||||| ||||||||||||  |||||||||||||||| ||  |||||||| || ||||||||||||    
T  1773024 ctgtttggattggcttattttagcttatctacttccataagttttgtgagactg--tgggagaacttatgaaaacagctt 1773101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 611 - 683
Target Start/End: Complemental strand, 11064804 - 11064732
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| ||||||||   ||||||||||||||||||||||| ||||| || |||||| ||||||||||||    
T  11064804 ttatttgagtttatctaccaacataagttttgtgagattgtttgagagaacttatgaaaatagcttatgacat 11064732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 671
Target Start/End: Complemental strand, 6521231 - 6521156
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaac 671  Q
    ||||||||| ||| |||||| ||||| | |||||| |||| |||||||||||||||||||||||| || |||||||    
T  6521231 cctgtttggattgacttattagagctgaactactgacatatgttttgtgagattgtttgggagaacttatgaaaac 6521156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 713 - 768
Target Start/End: Complemental strand, 7999182 - 7999127
Alignment:
Q  713 ttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttat 768  Q
    |||||||||| ||| ||||||||||| |||||| ||||||||||||||||||||||    
T  7999182 ttattttaccttttgccataaaaataacttatgcaagcttatacataagcgcttat 7999127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 611 - 682
Target Start/End: Complemental strand, 29925978 - 29925908
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||||||||||| ||| |||||||||||||  ||||||||||| || ||||||||||||||||||    
T  29925978 ttatttgggcttatctactagca-aagttttgtgagaccgtttgggagaacttatgaaaacagcttatgaca 29925908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 32942747 - 32942660
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| ||| |||||  |||||| ||||||| ||||||||||||  || |||||||||||| || |||| ||||||||||||||    
T  32942747 cctgtttggattgacttatacgagcttttctactgacataagttttgtttgactgtttgggagaatttatgaatacagcttatgacat 32942660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 679
Target Start/End: Complemental strand, 40426918 - 40426835
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||| ||||| |||||||||||||||||| || ||||| |||||||||| |||||||| |   || |||||||||||||||    
T  40426918 cctgttttggttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatg 40426835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 773
Target Start/End: Original strand, 7319091 - 7319165
Alignment:
Q  699 aaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||||||||||||||   ||| |  || ||||||||||||||||||||| |||||| |||||||||||    
T  7319091 aaaacaatttcactttattttatattttgcgttagaaatagcttatgtaagcttatgcataagtgcttatcatga 7319165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 589 - 683
Target Start/End: Complemental strand, 7674807 - 7674713
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| |||| ||||| |||||||||||||||||||||||   | |||||||||||||| || |||| |||| || || ||||| ||||||||||    
T  7674807 tttagaacctatttggattggcttatttgagcttatctacctacttaagttttgtgagactgcttggaagaacttatggaaacaacttatgacat 7674713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 684 - 770
Target Start/End: Original strand, 16458044 - 16458129
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatca 770  Q
    |||||||||||| |||||||||||| | || |||||| | ||| | |||||||||||||||| ||||||||| |||||| |||||||    
T  16458044 cttatagcatatacaaaaacaatttaagtt-attttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatca 16458129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 32372629 - 32372540
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||  ||||||||||| ||  | | |||| ||||| |||||||||  |||||||||| |||||||||||    
T  32372629 cttatagcatatacaaaaacaattcaactttattttatcaggtgctataataatagtttatgtaagtgtatacataagggcttatcatga 32372540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 35445775 - 35445848
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||| |||||||||| |||||||||||||||| | ||||  |||| || |||||||||||||| ||||    
T  35445775 cttatttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttataacat 35445848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 599 - 683
Target Start/End: Complemental strand, 39105615 - 39105530
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgaga-ttgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| ||| |||||||||| |||||||  || ||||||||| ||||| || |||||||||| || |||||||||||||||||||    
T  39105615 gtttggattgacttatttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacat 39105530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 697 - 766
Target Start/End: Original strand, 42500303 - 42500372
Alignment:
Q  697 caaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgctt 766  Q
    |||||||||||| ||||||||||| | |||   |||||||||||||||| |||||||||||| |||||||    
T  42500303 caaaaacaatttaactttattttatcttttgatataaaaatagcttatgcaagcttatacattagcgctt 42500372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 697 - 773
Target Start/End: Original strand, 3735569 - 3735645
Alignment:
Q  697 caaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||| || || ||||||||| | | ||| | ||| ||||||||||||||||||||| ||||||||||||||||||    
T  3735569 caaaaaaaaattaactttatttcatcttttgctatagaaatagcttatgtaagcttatccataagcgcttatcatga 3735645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 682
Target Start/End: Original strand, 34102244 - 34102316
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||| ||| ||||||||||||||||| | |||||||| ||| || |||||| |||||| ||||    
T  34102244 cttatttgagcttaactattggcataagttttgtgacactgtttgggggaatttatgaaaatagcttaagaca 34102316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 681
Target Start/End: Complemental strand, 39248247 - 39248166
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    ||||||||| | | |||||||||||||||    | ||||||||||||||||| |||||||||||| || | |||||||||||||||    
T  39248247 cctgtttggatcgacttatttgagcttat----tagcataagttttgtgagactgtttgggagaacttataaaaacagcttatgac 39248166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 606 - 681
Target Start/End: Complemental strand, 7985112 - 7985037
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    |||||| ||||||| ||||||||||||||||| ||||||||| | |||||||||  ||  ||||||||||| ||||    
T  7985112 ttggctaatttgagattatctactggcataagctttgtgagactatttgggagagcttaagaaaacagcttgtgac 7985037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 600 - 654
Target Start/End: Original strand, 10771809 - 10771864
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttg 654  Q
    ||||| ||||||||||||||||||||||||||||||||   |||||||||||||||    
T  10771809 tttggattggcttatttgagcttatctactggcataagcacttgtgagattgtttg 10771864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 635 - 682
Target Start/End: Original strand, 16457935 - 16457982
Alignment:
Q  635 aagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||| |||||||||||| || ||||||||||||||||||    
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgaca 16457982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 600 - 683
Target Start/End: Original strand, 40438875 - 40438958
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||| |    |||||||||||  |||||||||| ||| ||||||    
T  40438875 tttggattggcttatttgggctcatctactggcataagttttgtaaagacgtttgggagaacatttgaaaacaacttgtgacat 40438958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 41535534 - 41535447
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| || ||||||||||| ||||||||||||   || |||||||||| |  ||||||||||| || |||||||| ||||||||||    
T  41535534 cctgttcggattggcttatttaagcttatctacttatatcagttttgtgaaacagtttgggagaacttatgaaaacaacttatgacat 41535447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 679
Target Start/End: Original strand, 1464938 - 1465020
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||||||  ||| |||||||||||||| || || ||||||||| || |||| |||| ||||||| || |||||||||||||||    
T  1464938 ctgtttgaattgacttatttgagcttagcttctagcataagttctgcgagactgttcgggagaacttatgaaaacagcttatg 1465020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 683
Target Start/End: Original strand, 9202666 - 9202752
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||| ||| ||| ||||||||||||||||| |||||||||||||||| ||| | ||| ||| || |  || ||||||||||||||||    
T  9202666 ctgtatggattgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacat 9202752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 622 - 680
Target Start/End: Original strand, 19460330 - 19460388
Alignment:
Q  622 tatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    ||||||||||||||||||| |||||| ||||| |||||| ||||| ||||| |||||||    
T  19460330 tatctactggcataagtttagtgagactgtttaggagaacttttggaaacaacttatga 19460388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 647
Target Start/End: Original strand, 22209746 - 22209792
Alignment:
Q  601 ttgggttggcttatttgagcttatctactggcataagttttgtgaga 647  Q
    |||| ||| |||||||||||||||||||||||||||||||| |||||    
T  22209746 ttggattgacttatttgagcttatctactggcataagttttctgaga 22209792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 27298243 - 27298189
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    |||||||||||||||||||||| |   |||||||||||||||||||||| |||||    
T  27298243 ttggcttatttgagcttatctatttctataagttttgtgagattgtttgagagaa 27298189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 620 - 674
Target Start/End: Original strand, 41981644 - 41981698
Alignment:
Q  620 cttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagc 674  Q
    |||||||||| |||| |||||||||||| |||||||||||| || ||||||||||    
T  41981644 cttatctactagcattagttttgtgagactgtttgggagaacttatgaaaacagc 41981698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 613 - 683
Target Start/End: Complemental strand, 42228175 - 42228105
Alignment:
Q  613 atttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||||| |||  ||||||||| ||||||||||||||||||| || || |||||||||| |||||    
T  42228175 atttgaggttatccactctcataagtttcgtgagattgtttgggagaacttatggaaacagcttaagacat 42228105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 14932447 - 14932363
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||| ||||||||||||||||||||| | || ||| | | |||||||||||||||| || | |||||| ||||||||||    
T  14932447 tgtttggattgacttatttgagcttatctactgacctacgttgt-taagattgtttgggagaacttgtcaaaacaacttatgacat 14932363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 597 - 673
Target Start/End: Complemental strand, 32941622 - 32941545
Alignment:
Q  597 ctgtttgggttggcttatttgagctt-atctactggcataagttttgtgagattgtttgggagaagttttgaaaacag 673  Q
    |||||||| ||| |||||| |||||| |||||||| |||||||| |||||||  ||||||||||| || |||||||||    
T  32941622 ctgtttggattgacttattagagctttatctactgacataagttctgtgagaccgtttgggagaacttatgaaaacag 32941545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 635 - 680
Target Start/End: Original strand, 39154960 - 39155005
Alignment:
Q  635 aagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    |||||||||||||  |||||||||||||| ||||||||||||||||    
T  39154960 aagttttgtgagacagtttgggagaagttatgaaaacagcttatga 39155005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 12857257 - 12857341
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| |||| ||||||||||||||||| || | |||||||||||| | | ||  |||||| || |||||||| |||||||||    
T  12857257 tgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgaca 12857341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 12857624 - 12857708
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| |||| ||||||||||| ||||| || | |||||||||||| | ||||  |||||| || |||||||| |||||||||    
T  12857624 tgtttggattggtttatttgagctcatctattgacgtaagttttgtgaaactgttccggagaacttatgaaaacaacttatgaca 12857708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 615 - 683
Target Start/End: Complemental strand, 31038418 - 31038350
Alignment:
Q  615 ttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||| |||||||||||||||| | ||||| ||| || || | |||| ||||||||||||    
T  31038418 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacat 31038350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 615 - 683
Target Start/End: Complemental strand, 31047642 - 31047574
Alignment:
Q  615 ttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||| |||||||||||||||| | ||||| ||| || || | |||| ||||||||||||    
T  31047642 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacat 31047574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 771
Target Start/End: Complemental strand, 1130973 - 1130887
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    |||||||| |||  |||||||  || |||||||||||  |||||| ||| |||| |||||| |||||||||||| |||||||||||||    
T  1130973 cttatagcctatataaaaacagattaactttattttat-attttctatagaaatggcttatataagcttatacacaagcgcttatcat 1130887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 682
Target Start/End: Original strand, 2973464 - 2973547
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||| ||||||||||| |||||||||| || |||||| ||||||||   || || |||||| || ||||||||||||||||||    
T  2973464 tttggattggcttatttaagcttatctagtgacataagtttttgtgaacctgcttaggagaacttatgaaaacagcttatgaca 2973547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 647
Target Start/End: Complemental strand, 6096684 - 6096649
Alignment:
Q  612 tatttgagcttatctactggcataagttttgtgaga 647  Q
    ||||||| ||||||||||||||||||||||||||||    
T  6096684 tatttgaacttatctactggcataagttttgtgaga 6096649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 636
Target Start/End: Complemental strand, 37954843 - 37954800
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataa 636  Q
    ||||| |||||| ||||||||||||||||||||||| |||||||    
T  37954843 ggaccagtttggattggcttatttgagcttatctacaggcataa 37954800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 766
Target Start/End: Complemental strand, 6521109 - 6521028
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgctt 766  Q
    |||| ||||||| |||||| |||||  |||||||| || |||||| |||||| ||| ||||| |||||||| |||||||||||    
T  6521109 cttacagcatatacaaaaataatttatctttatttaac-attttctataaaagtagtttatgaaagcttatgcataagcgctt 6521028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 704 - 754
Target Start/End: Complemental strand, 12554448 - 12554398
Alignment:
Q  704 aatttcactttattttaccattttccataaaaatagcttatgtaagcttat 754  Q
    ||||| ||||||||||| ||||| | |||||||||||||||| ||||||||    
T  12554448 aatttaactttattttatcatttactataaaaatagcttatggaagcttat 12554398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 700 - 762
Target Start/End: Complemental strand, 15015840 - 15015778
Alignment:
Q  700 aaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagc 762  Q
    ||||||||| || |||||| ||| ||| | | |||||||||||||| ||||||||||||||||    
T  15015840 aaacaatttaacgttatttcaccttttgctacaaaaatagcttatgcaagcttatacataagc 15015778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 640
Target Start/End: Complemental strand, 40848892 - 40848850
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttt 640  Q
    ||||||| ||||||||||||| |||||| ||||||||||||||    
T  40848892 tgtttggattggcttatttgaacttatccactggcataagttt 40848850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 590 - 679
Target Start/End: Original strand, 25461559 - 25461647
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||| || |||||| ||||||||||||||||||||||   ||||||| ||||||| | ||||||| |||| | ||| ||| ||||||||    
T  25461559 ttagggcccgtttggattggcttatttgagcttatctatcagcataag-tttgtgatactgtttggtagaattcttggaaatagcttatg 25461647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 29925846 - 29925757
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||| || || ||||||||| ||  ||||||| | ||| | |||||||||||||||| |||| ||||| |||||| |||| ||||    
T  29925846 cttatagcacatacagaaacaatttaacgctattttatcttttgctataaaaatagcttatgcaagcatatacttaagcgtttattatga 29925757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 773
Target Start/End: Complemental strand, 32009955 - 32009906
Alignment:
Q  724 ttttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||| |||||||||||||| |||||||||| ||||| ||| ||||||||    
T  32009955 ttttctataaaaatagcttacgtaagcttatgcataatcgcatatcatga 32009906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 722 - 771
Target Start/End: Original strand, 34667815 - 34667864
Alignment:
Q  722 cattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    ||||||| | ||||||||||||||||| ||||||||||| | ||||||||    
T  34667815 cattttctacaaaaatagcttatgtaatcttatacataaacacttatcat 34667864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 683
Target Start/End: Original strand, 37611147 - 37611220
Alignment:
Q  611 ttatttgagcttatctactggcataagt-tttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| |||||||||||||| ||||  ||||||||||||||| ||||  || |||||||| ||| ||||||    
T  37611147 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacat 37611220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 683
Target Start/End: Original strand, 37787877 - 37787950
Alignment:
Q  611 ttatttgagcttatctactggcataagt-tttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| |||||||||||||| ||||  ||||||||||||||| ||||  || |||||||| ||| ||||||    
T  37787877 ttatttgaacttatctactggcacaagtacttgtgagattgtttgagagagcttatgaaaacaacttgtgacat 37787950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 630
Target Start/End: Complemental strand, 42647042 - 42647009
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactg 630  Q
    |||||||| |||||||||||||||||||||||||    
T  42647042 ctgtttggattggcttatttgagcttatctactg 42647009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 2e-29; HSPs: 88)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 2295249 - 2295163
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  2295249 cctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgaca 2295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 590 - 679
Target Start/End: Complemental strand, 38247486 - 38247397
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||| ||||||||| |||| |||||||| |||||||||||||||||||||||||  | |||||||||||| || |||||||||||||||    
T  38247486 ttagggcctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatg 38247397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 594 - 682
Target Start/End: Complemental strand, 5721080 - 5720992
Alignment:
Q  594 gacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||| ||||| |||||||||||||||||| ||||| |||||||||||||  || |||||||||||| || ||||||||||||||||||    
T  5721080 gacctctttggattggcttatttgagcttaactacttgcataagttttgttggactgtttgggagaacttatgaaaacagcttatgaca 5720992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 14576571 - 14576657
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||||||  | ||||||||| || || ||||||||||||||||||    
T  14576571 cctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgaca 14576657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 27976600 - 27976511
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||| ||||| ||  | ||||| | ||||||||||||||||||||||||||||||||  ||||||||||    
T  27976600 cttatagcatatacaaaaacaatttaactttgttcaatcatttgctataaaaatagcttatgtaagcttatacataaggacttatcatga 27976511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 590 - 683
Target Start/End: Complemental strand, 37473566 - 37473469
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgaga----ttgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||||||||| |||||||||||||| |||||||| ||||||||||| | ||||    ||||||||||||| ||||||||||| ||||||||||    
T  37473566 ttagggcctgtttggattggcttatttgagattatctacgggcataagtttcgagagaatgtttgtttgggagaacttttgaaaacaacttatgacat 37473469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 609 - 681
Target Start/End: Complemental strand, 38001735 - 38001663
Alignment:
Q  609 gcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    ||||||||||| ||||| |||| |||||||||||||||| |||||||||||| || |||||||||||||||||    
T  38001735 gcttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatgac 38001663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 596 - 676
Target Start/End: Original strand, 43230689 - 43230769
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||||||  |||||||||| |||||| || ||||||||||||    
T  43230689 cctgtttggattggcatatttgagcttctctactggcataagttttacgagattgtttaggagaatttatgaaaacagctt 43230769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 684 - 752
Target Start/End: Complemental strand, 47432101 - 47432033
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagctt 752  Q
    |||||||||||| |||||||||||| ||||||||||| | ||||| |||||||||||||||||||||||    
T  47432101 cttatagcatattcaaaaacaatttaactttattttatctttttctataaaaatagcttatgtaagctt 47432033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 610 - 682
Target Start/End: Complemental strand, 49938886 - 49938814
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||| |||| |  |||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  49938886 cttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgaca 49938814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 608 - 679
Target Start/End: Complemental strand, 29904892 - 29904821
Alignment:
Q  608 ggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| ||||| || | |||||||||||||    
T  29904892 ggcttatttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatg 29904821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 594 - 682
Target Start/End: Complemental strand, 5741761 - 5741673
Alignment:
Q  594 gacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||| ||||| |||||||||||||||||| ||||| |||||||||||||   | |||||||||||| || |||||||| |||||||||    
T  5741761 gacctctttggattggcttatttgagcttaactacttgcataagttttgttgaactgtttgggagaacttatgaaaacaacttatgaca 5741673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 50644174 - 50644258
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||| ||||||||||||||||||||  |||| ||||||||||| |||||||||||| || |||||||| |||| ||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaacttacgaca 50644258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 597 - 660
Target Start/End: Complemental strand, 34952354 - 34952291
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    |||||||| |||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||    
T  34952354 ctgtttggattggcttatttgagcttatctattgggataagatttgtgagattatttgggagaa 34952291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 686 - 773
Target Start/End: Complemental strand, 37473402 - 37473315
Alignment:
Q  686 tatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| || |||| | || ||||| ||||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||    
T  37473402 tatagcatatacataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatga 37473315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 610 - 680
Target Start/End: Complemental strand, 6102292 - 6102223
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    |||||||||| |||||||| ||||||| |||||||||||||||||||||||  | ||||||||||||||||    
T  6102292 cttatttgagtttatctaccggcataaattttgtgagattgtttgggagaa-ctatgaaaacagcttatga 6102223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 6292643 - 6292558
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||| ||||||||||||||||||||| ||||||   || |||||||||||||||||| |||| |||||||||||||||||    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagcacttttgagattgtttgggagaa-tttttaaaacagcttatgacat 6292558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 610 - 660
Target Start/End: Original strand, 33204325 - 33204375
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  33204325 cttatttgagcttatctactgacataagttttgtgagactgtttgggagaa 33204375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 600 - 681
Target Start/End: Complemental strand, 2778040 - 2777959
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    ||||| ||||||||||| |||||||||| | ||||||||||||||||| ||||| |||||| || ||||| || ||||||||    
T  2778040 tttggattggcttattttagcttatctatttgcataagttttgtgagactgtttaggagaacttatgaaaccaacttatgac 2777959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 678
Target Start/End: Original strand, 3233933 - 3234014
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    |||||||| ||| |||||||||||||||||| || | |||||||||||||| |||| ||||||| || |||||||| |||||    
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttat 3234014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 596 - 660
Target Start/End: Complemental strand, 2295344 - 2295280
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||| ||||| | ||||||||||    
T  2295344 cctgtttggattggcttatttgagcttatctactgacttaagttttctgagactatttgggagaa 2295280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 697 - 773
Target Start/End: Complemental strand, 14331781 - 14331705
Alignment:
Q  697 caaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| ||||||||||| | | |||  || ||||||||||||| |||||||||||||| |||||||||||    
T  14331781 caaaaacaatttaactttattttatcttgttctgtagaaatagcttatgttagcttatacataagtgcttatcatga 14331705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 596 - 660
Target Start/End: Original strand, 14385710 - 14385774
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    |||||| || ||||||||||||||||||||||||||||||||||| |||||| | ||| ||||||    
T  14385710 cctgttcggattggcttatttgagcttatctactggcataagtttcgtgagactattttggagaa 14385774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 596 - 676
Target Start/End: Original strand, 34795363 - 34795443
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    ||||||||| |||| |||||||||||   |||||||||||| ||||| |||| |||||||||||| || ||||||||||||    
T  34795363 cctgtttggattgggttatttgagctagcctactggcataaattttgcgagactgtttgggagaacttatgaaaacagctt 34795443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 37617384 - 37617468
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||| |||||||||| ||||||| || | |||||||||||||| |||||| ||||| || |||||||||||| |||||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagcttttgaca 37617468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 683
Target Start/End: Complemental strand, 1432664 - 1432581
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| |||||||||||||||||||| || | ||||| |||||||||| ||||||| |||| || |||||| ||| ||||||||    
T  1432664 tttggattggcttatttgagcttatccaccgacataaattttgtgagactgtttggaagaacttatgaaaatagcgtatgacat 1432581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 730 - 773
Target Start/End: Complemental strand, 5741621 - 5741578
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  5741621 ataaaaatagcttatgtaaacttatacataagcgcttatcatga 5741578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 647
Target Start/End: Complemental strand, 15477706 - 15477655
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgaga 647  Q
    ||||||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  15477706 cctgtttggattggcttattagagcttatctacttgcataagttttgtgaga 15477655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 678
Target Start/End: Complemental strand, 473316 - 473234
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||| | ||||||||||||||| |||||||||||||||||| ||||| |   |||||||||| || |||||| |||||||    
T  473316 cctgtttagattggcttatttgagcctatctactggcataagttctgtgaaacattttgggagaacttatgaaaaaagcttat 473234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 683
Target Start/End: Complemental strand, 7941758 - 7941672
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| |||| ||||||||| |||||| ||  | | |||||||||||| ||||||| |||| || |||||||||||||||||||    
T  7941758 ctgtttggattggtttatttgagtttatctgctaacgtgagttttgtgagactgtttggaagaatttatgaaaacagcttatgacat 7941672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 33186459 - 33186373
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| |||||||||||||| |||||   ||||||||||||||||||| ||| | |||||| || ||||||| | ||||||||    
T  33186459 cctgtttggattggcttatttgagtttatccgttggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgaca 33186373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 10233579 - 10233652
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| ||||||||| |||| |||| ||||||| ||| ||||||| |||| || |||||||||||||||||||    
T  10233579 cttattagagcttatccactgacatatgttttgtaagactgtttggaagaacttatgaaaacagcttatgacat 10233652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 593 - 682
Target Start/End: Complemental strand, 14332137 - 14332048
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||| ||||| ||||  ||||||||||||| |||| ||||||||||| |||| ||| ||| || ||||||||  ||||||||    
T  14332137 ggacctgtttggattggcatattcaagcttatctactgtcatatgttttgtgagactgttcgggtgaacttatgaaaacaaattatgaca 14332048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 682
Target Start/End: Complemental strand, 6557111 - 6557039
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||||||||||  |||||||||||||||| | |||| ||||| || |||||| |||||||||||    
T  6557111 cttatttgaacttatctactaacataagttttgtgagactatttgagagaacttatgaaaatagcttatgaca 6557039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 594 - 682
Target Start/End: Complemental strand, 13810153 - 13810065
Alignment:
Q  594 gacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||| |||||||||||| |||||||||||| | |||||||||||||| | |||  ||||| || |||| |||| ||||||||    
T  13810153 gacctgtatggattggcttatttgtgcttatctactgacgtaagttttgtgagactcttttagagaacttatgaatacagtttatgaca 13810065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 773
Target Start/End: Original strand, 14576719 - 14576807
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||| |||||||||||| ||||||||||| | ||| | ||  ||||||||||  | |||||||| ||||| |||||||||||    
T  14576719 ttatagcatatacaaaaacaatttaactttattttatcctttactatggaaatagcttacatgagcttataaataagtgcttatcatga 14576807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 688 - 752
Target Start/End: Original strand, 30582017 - 30582081
Alignment:
Q  688 tagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagctt 752  Q
    |||||||| ||||||||| || ||||||||||| | ||||| ||||||||| |||||||||||||    
T  30582017 tagcatatacaaaaacaagttaactttattttatctttttctataaaaataccttatgtaagctt 30582081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 685 - 761
Target Start/End: Complemental strand, 43990255 - 43990179
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataag 761  Q
    |||||| |||| || ||||||||| ||||| ||||| || || |||||||||||| |||||| ||||||||||||||    
T  43990255 ttataggatatacataaacaatttaactttgttttatcacttgccataaaaatagtttatgtgagcttatacataag 43990179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 680
Target Start/End: Original strand, 47498757 - 47498840
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    ||||||||| ||| |||||| |||||||| || |||| |||||||| || ||||||||||||||| || |||||| |||||||||    
T  47498757 cctgtttggattgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatga 47498840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 730 - 773
Target Start/End: Complemental strand, 5720940 - 5720897
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  5720940 ataaaaatagcttacgtaaacttatacataagcgcttatcatga 5720897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 710 - 773
Target Start/End: Complemental strand, 17830133 - 17830070
Alignment:
Q  710 actttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||| ||||| | ||||||||||||||||||| | |||| ||||| |||||||||||    
T  17830133 actttattttatcatttgctataaaaatagcttatgtaatcgtatagataagtgcttatcatga 17830070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 734 - 773
Target Start/End: Original strand, 24552455 - 24552494
Alignment:
Q  734 aaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  24552455 aaatagcttatgtaagcttgtacataagcgcttatcatga 24552494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 684 - 747
Target Start/End: Complemental strand, 30581807 - 30581744
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgta 747  Q
    ||||||||||||  ||||||||||| ||||||||| | | ||||| ||||||||||||||||||    
T  30581807 cttatagcatataaaaaaacaatttaactttatttcatcgttttctataaaaatagcttatgta 30581744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 684 - 771
Target Start/End: Complemental strand, 41505691 - 41505605
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    |||||| ||||| | |||||||||| |||||| |||||  ||||| |||||||||||||||||||||  || ||||||| ||||||||    
T  41505691 cttataacatatacgaaaacaatttaactttaatttacg-ttttctataaaaatagcttatgtaagccaatgcataagcacttatcat 41505605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 598 - 680
Target Start/End: Original strand, 41638227 - 41638310
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    ||||||| ||| |||| |||||| ||||||||||||||||  ||||||||| |||||||||||  || ||||||||| ||||||    
T  41638227 tgtttggattgtcttaattgagcctatctactggcataagcatttgtgagactgtttgggagagattatgaaaacagtttatga 41638310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 599 - 682
Target Start/End: Original strand, 42575389 - 42575472
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||| ||| |||||||||||||||||||| |||||| |||||||||  |||||| || || || | |||||| |||||||||    
T  42575389 gtttggattgccttatttgagcttatctactagcataaattttgtgaggctgtttgagaaaatttataaaaacaacttatgaca 42575472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 683
Target Start/End: Original strand, 3887550 - 3887636
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| ||| |||||||||||||  ||| ||| ||||||||||| ||  ||||||| |||| || |||||||| ||||||||||    
T  3887550 ctgtttggattgacttatttgagctttactattggtataagttttgtaaggctgtttggaagaacttatgaaaacatcttatgacat 3887636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 600 - 638
Target Start/End: Original strand, 22416832 - 22416870
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagt 638  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  22416832 tttggattggcttatttgagcttatctactggcataagt 22416870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 28287959 - 28287901
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgaga 647  Q
    |||||||||||||||| |||||||||| ||| |||| || ||||||||| |||||||||    
T  28287959 tttaggacctgtttggattggcttattagagtttatatattggcataagctttgtgaga 28287901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 697 - 771
Target Start/End: Original strand, 37631637 - 37631711
Alignment:
Q  697 caaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    ||||||||||||  ||| |||||| | || || ||||| |||||||||||||||||||  |||||||||||||||    
T  37631637 caaaaacaatttagcttcattttatctttctctataaagatagcttatgtaagcttatgtataagcgcttatcat 37631711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 683
Target Start/End: Original strand, 41195123 - 41195198
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||||||||||| ||||||||||||||  |||||| | |||||||||||| ||||  ||| ||||||||||||    
T  41195123 ttggcgtatttgagcttgtctactggcataag--ttgtgatactgtttgggagaacttttataaatagcttatgacat 41195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 724 - 773
Target Start/End: Complemental strand, 2295069 - 2295020
Alignment:
Q  724 ttttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||| ||| ||||||||||||||||||||| ||||||| ||||||||||    
T  2295069 ttttctatagaaatagcttatgtaagcttatgcataagcacttatcatga 2295020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 647
Target Start/End: Original strand, 27146174 - 27146223
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgaga 647  Q
    ||||||| ||| || ||||||||||||||| |||||||||||||||||||    
T  27146174 tgtttggattgactgatttgagcttatctattggcataagttttgtgaga 27146223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 683
Target Start/End: Original strand, 31517668 - 31517745
Alignment:
Q  607 tggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||| ||||||||||||   |||||||| |||||||||||| || | |||||| || |||||||    
T  31517668 tggcttatttgagcttatttactggcataagcacttgtgagactgtttgggagaacttatcaaaacaactcatgacat 31517745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 39976141 - 39976214
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||| |||||||||| |||||||||||||| | |||||| ||||| || |||||| |  |||||||||    
T  39976141 cttatttgagattatctactgacataagttttgtgaaactgtttgagagaacttatgaaaataatttatgacat 39976214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 598 - 639
Target Start/End: Complemental strand, 41505825 - 41505784
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagtt 639  Q
    ||||||| ||||||||||||||||||||||||| ||||||||    
T  41505825 tgtttggattggcttatttgagcttatctactgacataagtt 41505784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 589 - 638
Target Start/End: Complemental strand, 48282282 - 48282233
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagt 638  Q
    |||| ||||||||||||||| || ||||||||||| ||||||||||||||    
T  48282282 tttaagacctgtttgggttgactaatttgagcttacctactggcataagt 48282233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 51688710 - 51688621
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| | ||||||||||||  |||||||||| | ||| | | | |||||||| ||||||||||||| |||| | ||||||||||    
T  51688710 cttatagcatgtacaaaaacaatttatctttattttatcttttcctacataaatagctcatgtaagcttatatataaacacttatcatga 51688621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 618 - 683
Target Start/End: Original strand, 52863290 - 52863355
Alignment:
Q  618 agcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||||||| ||||||| || ||||| |||||| || || ||| ||||||||||||    
T  52863290 agcttatctactggcataatttttgtgtgactgtttcggagaacttatggaaaaagcttatgacat 52863355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 600 - 659
Target Start/End: Original strand, 4549462 - 4549522
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggaga 659  Q
    ||||| |||||||||||||| |||||||||||||||||  ||| ||||| |||||||||||    
T  4549462 tttggattggcttatttgagattatctactggcataagcatttctgagactgtttgggaga 4549522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 618 - 686
Target Start/End: Original strand, 7119877 - 7119945
Alignment:
Q  618 agcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacatctt 686  Q
    ||||||| |||| ||||||||||||||||| ||||||  |||| || |||||||| ||||||| |||||    
T  7119877 agcttatatactagcataagttttgtgagactgtttgcaagaatttatgaaaacaacttatgatatctt 7119945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 684 - 768
Target Start/End: Complemental strand, 7862083 - 7861999
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttat 768  Q
    |||||||||||  ||||||||||||  | | |||||| | ||||| |||||||||||||||  |||||||| |||||| ||||||    
T  7862083 cttatagcatagacaaaaacaatttaccatcattttatctttttctataaaaatagcttatcaaagcttatgcataagagcttat 7861999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 614 - 682
Target Start/End: Original strand, 37517101 - 37517169
Alignment:
Q  614 tttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||| |||| ||||||||||||||||| ||| ||  |||| ||  |||||||||||||||||    
T  37517101 tttgagcttatatacttgcataagttttgtgagactgtatgaaagaacttacgaaaacagcttatgaca 37517169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 619 - 683
Target Start/End: Original strand, 38018304 - 38018368
Alignment:
Q  619 gcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||||||||||||||||| || |||||| || || ||||| ||| ||| |||||    
T  38018304 gcttatctactggcataagttttgtgagactggttgggaaaacttatgaaagcagattaggacat 38018368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 39658438 - 39658490
Alignment:
Q  608 ggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||| |||||||||||| || | ||||||||||||||||||| |||||||||    
T  39658438 ggcttgtttgagcttatccaccgacataagttttgtgagattgattgggagaa 39658490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 687 - 770
Target Start/End: Original strand, 41195261 - 41195345
Alignment:
Q  687 atagcatatgcaaaaacaatttcacttt-attttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatca 770  Q
    |||| |||| |||||||| ||| ||||| || ||| ||||| | |||||||||| |||||||| |||||||||||||| ||||||    
T  41195261 atagtatatacaaaaacagtttaacttttatgttatcatttactataaaaatagtttatgtaaacttatacataagcgattatca 41195345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 683
Target Start/End: Complemental strand, 43990395 - 43990323
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| | ||||||||  |||| |||||||||  | ||||||||||  |||||||||||||||||||||    
T  43990395 ttatttgagttcatctactgatataaattttgtgaggctatttgggagaacgtttgaaaacagcttatgacat 43990323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 9572049 - 9572100
Alignment:
Q  627 actggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    |||| |||||| ||||||||| |||||||||||| || ||||||||||||||    
T  9572049 actgacataagatttgtgagactgtttgggagaacttatgaaaacagcttat 9572100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 637
Target Start/End: Complemental strand, 21002306 - 21002267
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataag 637  Q
    ||||||| |||||||||||||||||||||||| |||||||    
T  21002306 tgtttggattggcttatttgagcttatctacttgcataag 21002267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 730 - 773
Target Start/End: Original strand, 33541819 - 33541862
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||| |||||  |||||||||||||||||||||||||||    
T  33541819 ataaaaatatcttattcaagcttatacataagcgcttatcatga 33541862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 660
Target Start/End: Original strand, 38116188 - 38116239
Alignment:
Q  609 gcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||||||||||||||| ||||| ||||||||||| | |||| |||||    
T  38116188 gcttatttgagcttatctactagcataggttttgtgagactatttgagagaa 38116239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 656
Target Start/End: Complemental strand, 15784456 - 15784410
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttggg 656  Q
    ||||||||||||||||||||  |||||||||||| ||| ||||||||    
T  15784456 cttatttgagcttatctactaacataagttttgtaagactgtttggg 15784410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 750
Target Start/End: Original strand, 24915116 - 24915182
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagc 750  Q
    |||||||||||| |||||||||||| ||||||||||| | | | | ||| |||||| ||||||||||    
T  24915116 cttatagcatatacaaaaacaatttaactttattttatcttctgctatagaaatagtttatgtaagc 24915182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 589 - 671
Target Start/End: Complemental strand, 36872888 - 36872806
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaac 671  Q
    |||||| ||||||||| ||||||||||| |||||| |||    ||||||||||| |||| ||||| |||||| || |||||||    
T  36872888 tttagggcctgtttggattggcttatttaagcttaactaacaacataagttttgcgagactgttttggagaatttatgaaaac 36872806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 613 - 683
Target Start/End: Original strand, 37769606 - 37769676
Alignment:
Q  613 atttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||| |||  | ||| |||||||||| ||||||| | ||  |||||||||||||||||||||    
T  37769606 atttgagcttatccactaccgtaaattttgtgagactgtttggcaaaacctttgaaaacagcttatgacat 37769676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 660
Target Start/End: Original strand, 38116008 - 38116058
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||||||||||||||| | ||||||||||||||  |||| ||||||    
T  38116008 cttatttgagcttatctactgacgtaagttttgtgagacggttttggagaa 38116058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 652
Target Start/End: Complemental strand, 7028440 - 7028399
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtt 652  Q
    |||||||||||||||| | | |||||||||||||||||||||    
T  7028440 ttatttgagcttatctgccgacataagttttgtgagattgtt 7028399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 660
Target Start/End: Original strand, 7107448 - 7107493
Alignment:
Q  615 ttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    |||||||||||||||| |||||||||||||| | | ||||||||||    
T  7107448 ttgagcttatctactgacataagttttgtgatactatttgggagaa 7107493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 11941401 - 11941328
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| ||| |||||| ||||| ||| ||||||| |||||||||||  || |||||| ||||||| ||||    
T  11941401 cttatttgaacttttctactagcatatgttatgtgagactgtttgggagagcttatgaaaatagcttataacat 11941328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 14385828 - 14385917
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||| || || |||||||||||| || ||||| || | ||| | |||||||||| || ||  ||||||||||||||| ||||||||||    
T  14385828 cttataacagatacaaaaacaatttaacattattctatcttttgctataaaaatagtttctgccagcttatacataagctcttatcatga 14385917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 637
Target Start/End: Original strand, 18327067 - 18327104
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataag 637  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataag 18327104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 27976752 - 27976670
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||||||||||||||| |||  |||| |||||||||||| ||| ||||| ||| || ||||||||| ||||||||||||    
T  27976752 tgtttggattggcttatttgagc-tat-aactgacataagttttgttagactgttt-ggaaaacttttgaaaatagcttatgacat 27976670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 637
Target Start/End: Original strand, 30815567 - 30815612
Alignment:
Q  592 aggacctgtttgggttggcttatttgagcttatctactggcataag 637  Q
    |||||||||||||  ||||||||||||| ||||||||| |||||||    
T  30815567 aggacctgtttggaatggcttatttgaggttatctactagcataag 30815612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 645
Target Start/End: Original strand, 37631476 - 37631525
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtga 645  Q
    ||||||||| |||||||||||||||| ||||| | |||||||||| ||||    
T  37631476 cctgtttggattggcttatttgagctcatctattagcataagtttagtga 37631525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 683
Target Start/End: Original strand, 37842283 - 37842360
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||||||||||  |||||||| |||| | ||||  | |||| || |||||||| || |||||||    
T  37842283 ttggcttatttgagcttatctactgatataagtttggtgacactgttcagtagaacttatgaaaacatctaatgacat 37842360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 730 - 771
Target Start/End: Complemental strand, 42174816 - 42174775
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    ||||||||||| |||| |||||||||||||||| ||||||||    
T  42174816 ataaaaatagcctatgcaagcttatacataagcccttatcat 42174775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 686 - 773
Target Start/End: Original strand, 44932002 - 44932086
Alignment:
Q  686 tatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| |||||||||||| |||||   ||| | ||| | ||||| |||| ||||| |||||||||| |||| |||||||||||    
T  44932002 tatagcatatacaaaaacaatttaacttt---ttatcttttgctataaatatagtttatgcaagcttatacctaagtgcttatcatga 44932086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 641 - 682
Target Start/End: Original strand, 51929501 - 51929542
Alignment:
Q  641 tgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||||||||| |  ||||||||||||||||||    
T  51929501 tgtgagattgtttgggagaattcatgaaaacagcttatgaca 51929542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 6e-27; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 54426196 - 54426110
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||  |||||||||||||||||    
T  54426196 cctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgaca 54426110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 596 - 678
Target Start/End: Original strand, 21731573 - 21731655
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||| |||| |||||||||| ||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||    
T  21731573 cctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttat 21731655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 597 - 678
Target Start/End: Original strand, 35571549 - 35571630
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| |||| ||||||||||||    
T  35571549 ctgtttggattggcttatttgagcttatctactagcataagttttgtgggatagtttgggagaacttttaaaaacagcttat 35571630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 594 - 681
Target Start/End: Complemental strand, 55437231 - 55437144
Alignment:
Q  594 gacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    ||||||||||| |||||||||||||| |||||||||| |||||||||||||| ||||||||  |||| || |||||||| ||||||||    
T  55437231 gacctgtttggattggcttatttgagtttatctactgccataagttttgtgaaattgtttgaaagaacttatgaaaacaacttatgac 55437144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 26782 - 26868
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| |||||||||||||||||||| ||||||||||| ||||| ||| |||||  ||||| || ||||||||||||||||||    
T  26782 cctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgaca 26868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 593 - 682
Target Start/End: Original strand, 15173217 - 15173306
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||| |||||| ||| ||||||||| ||||||||||| |||||||||||||||| |||||||||||  || |||||| |||||||||||    
T  15173217 ggaccagtttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgaca 15173306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 24169414 - 24169329
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| |||||||||| ||| ||||||||||||||||||||||||||| | |||| ||||| |||| |||| ||||||||||||    
T  24169414 tgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacat 24169329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 50681154 - 50681243
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||| || |||||||| | | | | ||||||||||||| ||||||||||||||||| ||||||||||||    
T  50681154 cttatagcatatacaaaaacaatttaacattattttatcttatcctataaaaatagcttttgtaagcttatacataaacgcttatcatga 50681243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 39603090 - 39603173
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||||||||||||||||| |||| ||| ||||||||||||||| |||||||||||| ||  |||||||||||||||||    
T  39603090 tgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgaca 39603173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 597 - 684
Target Start/End: Original strand, 27043748 - 27043835
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacatc 684  Q
    |||||||| ||| ||||||||||||||||||||| |||||||||||||| | ||||||| ||||||| || ||| |||||||| ||||    
T  27043748 ctgtttggattgacttatttgagcttatctactgacataagttttgtgaaactgtttggaagaagttatgcaaatagcttatggcatc 27043835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 593 - 660
Target Start/End: Original strand, 44862898 - 44862965
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    |||| ||||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  44862898 ggacttgtttggattggcatatttgagcttgtctactggcaaaagttttgtgagattgtttgggagaa 44862965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 597 - 683
Target Start/End: Original strand, 13126494 - 13126580
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| ||||||||||| |||||| |||||  |||||||||||||||| ||||||| |||| || | |||||||||||||||||    
T  13126494 ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacat 13126580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 699 - 773
Target Start/End: Complemental strand, 24169250 - 24169177
Alignment:
Q  699 aaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| ||||| |||||||||||  ||||||||||||||||||||||| ||||||||||||| |||||||    
T  24169250 aaaacaattt-acttttttttaccatttgtcataaaaatagcttatgtaagctcatacataagcgctaatcatga 24169177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 29388767 - 29388681
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||| ||||||||| ||||||||||  |||||||||||| |||||||||||||||| ||  |||| ||| ||||||||    
T  29388767 cctgtttgggttgacttatttgaccttatctactaacataagttttgtaagattgtttgggagaacttacgaaagcagtttatgaca 29388681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 22030208 - 22030120
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||| ||| | ||||||||||| | ||| | ||| ||||||||||||| ||||||||||||||||||||||||||    
T  22030208 cttatagcatatacaaaaataatataactttattttatccttt-ctatagaaatagcttatgtgagcttatacataagcgcttatcatga 22030120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 680 - 772
Target Start/End: Complemental strand, 18425821 - 18425730
Alignment:
Q  680 acatcttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatg 772  Q
    |||| ||||| ||| | |||||||||||| ||||||||||||||||| |||| ||||||||| |||||| ||||||||||| | |||||||||    
T  18425821 acattttataacatgtacaaaaacaatttaactttattttaccatttgccat-aaaatagctcatgtaatcttatacataatcacttatcatg 18425730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 660
Target Start/End: Complemental strand, 18815176 - 18815112
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||| |||||||||||||||||| ||||| ||||||||||||||||| |||||| |||||    
T  18815176 cctgtttggattggcttatttgagcttacctactagcataagttttgtgagactgtttgagagaa 18815112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 683
Target Start/End: Original strand, 17822782 - 17822869
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| ||  ||||||||||||||||||||| |||||||| ||||||| | ||| ||||||  | |||||||||||||||||||    
T  17822782 cctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacat 17822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 678
Target Start/End: Complemental strand, 23320004 - 23319924
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||| |||||||||||||| ||||||||| |||||  |||||  ||| ||||||||||||||| ||||||||||||||    
T  23320004 cctgtttggattggcttatttgagattatctactagcatacattttg--agactgtttgggagaagttatgaaaacagcttat 23319924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 679
Target Start/End: Original strand, 25904140 - 25904223
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    ||||||| ||||| |||||||||||||||| | || ||||| |||||||||| |||||||||||  || |||||||||||||||    
T  25904140 cctgttttggttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatg 25904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 698 - 773
Target Start/End: Complemental strand, 43505947 - 43505872
Alignment:
Q  698 aaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||| || |||||||| | ||| | |||||||||||||||| ||||||||||||||| |||||||||||    
T  43505947 aaaaacaatttaacgttattttatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatga 43505872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 596 - 678
Target Start/End: Original strand, 39691066 - 39691148
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||  ||| |||||||||||||||||||| ||||||||||||||||| |||||| ||||| || ||  ||||||||||    
T  39691066 cctgtttgaattgacttatttgagcttatctactagcataagttttgtgagactgtttgagagaatttatgggaacagcttat 39691148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 685 - 771
Target Start/End: Complemental strand, 41336764 - 41336679
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    ||||| ||||| |||||||||||| ||||||||||| | ||| | |||||||||||||||| |||| |||||||||| |||||||||    
T  41336764 ttataacatatacaaaaacaatttaactttattttatc-tttgctataaaaatagcttatgcaagcctatacataagtgcttatcat 41336679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 42403940 - 42404025
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||| |||||||||||||||| |||| ||||||||||||| |  | |||||||||| || ||||||||||||||||||    
T  42403940 cctgtttggattgacttatttgagcttatcaactgacataagttttgtgtg-ctatttgggagaatttctgaaaacagcttatgaca 42404025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 606 - 683
Target Start/End: Complemental strand, 52172868 - 52172790
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagt-tttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||||||  ||||||||||||| ||||||||| |||| |||| || || |||||||||||||||||||    
T  52172868 ttggcttatttgagcttacatactggcataagtatttgtgagactgttggggaaaacttatgaaaacagcttatgacat 52172790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 16200046 - 16200135
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||| ||| | ||| ||||||||| ||| ||||||||||||||||||| |||| || |||| |||||| ||||    
T  16200046 cttatagcatatacaaaaacagtttgattttcttttaccatcttctataaaaatagcttatgtaatcttacacgtaagtgcttattatga 16200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 688 - 769
Target Start/End: Complemental strand, 17204139 - 17204058
Alignment:
Q  688 tagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatc 769  Q
    |||||||| |||||||||| | ||||||||||| ||||| | ||||||| |||||||||||||| | ||||||||| |||||    
T  17204139 tagcatatacaaaaacaatataactttattttaacatttgctataaaaacagcttatgtaagctaacacataagcggttatc 17204058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 19494919 - 19494830
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||| ||||||| ||||||||||||  |||||||||| ||||| | ||| || |||||||||||| |||||||||| | |||||||||||    
T  19494919 cttagagcatatacaaaaacaatttagctttattttatcatttgctatagaactagcttatgtaaccttatacataggtgcttatcatga 19494830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 605 - 682
Target Start/End: Complemental strand, 29657528 - 29657451
Alignment:
Q  605 gttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||| |||||||||||||||||||   || |||||||||||||||| ||| ||||| || ||||||||||||||||||    
T  29657528 gttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatgaca 29657451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 593 - 682
Target Start/End: Complemental strand, 41336916 - 41336827
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||| ||||||| ||| |||||||||| |||||||||  ||||||||||||||||| ||| || |||| ||  |||||||||||||||||    
T  41336916 ggacttgtttggattgacttatttgagtttatctactcacataagttttgtgagatagttaggaagaacttaagaaaacagcttatgaca 41336827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 596 - 657
Target Start/End: Complemental strand, 44798033 - 44797972
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttggga 657  Q
    ||||||||| |||||| |||| ||||||||||||| |||||||||||||||| |||||||||    
T  44798033 cctgtttggattggctgatttaagcttatctactgacataagttttgtgagactgtttggga 44797972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 606 - 683
Target Start/End: Original strand, 49939878 - 49939955
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||| |||||||||||| ||||||| ||||||||| | ||||| |||| || |||||| ||||||||||||    
T  49939878 ttggcttatttaagcttatctactagcataagctttgtgagactatttggaagaacttatgaaaagagcttatgacat 49939955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 597 - 673
Target Start/End: Complemental strand, 8705093 - 8705017
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacag 673  Q
    |||||||| |||||| ||||||||||||||| || |||||||||||||||| || ||||||||| || | |||||||    
T  8705093 ctgtttggattggctcatttgagcttatctattgacataagttttgtgagactgattgggagaacttataaaaacag 8705017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 610 - 682
Target Start/End: Complemental strand, 22030342 - 22030270
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||| |||| | ||||||||||||||||  | |||||||||| || ||||||||||||||||||    
T  22030342 cttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgaca 22030270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 599 - 683
Target Start/End: Complemental strand, 23459777 - 23459693
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| ||||| |||||||||||||||||| |||||||| | || ||| ||||| |||||| || |||||| ||||||||||||    
T  23459777 gtttggattggcatatttgagcttatctactagcataagtatggtaagactgtttcggagaacttatgaaaaaagcttatgacat 23459693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 597 - 677
Target Start/End: Original strand, 49940085 - 49940165
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctta 677  Q
    |||||||| ||| |||||||||||||| || ||  |||||||||||||||| |||||| ||||| || |||||||||||||    
T  49940085 ctgtttggattgacttatttgagcttacctgctaacataagttttgtgagactgtttgagagaacttatgaaaacagctta 49940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 683
Target Start/End: Original strand, 52315118 - 52315201
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||| |||||||||| |||||||||| | |||||||||||||||||||||| |||| || | |||||| ||||| ||||    
T  52315118 tttggattgacttatttgagtttatctactgacgtaagttttgtgagattgtttggaagaacttatcaaaacaacttatcacat 52315201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 27329993 - 27330079
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||  ||||||||||| ||||||||||||  |||||||||  |||||||||||| ||| | || |||||||| |||||||||    
T  27329993 cctgtttgaattggcttatttaagcttatctacttacataagtttaatgagattgtttgagaggatttatgaaaacaacttatgaca 27330079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 682
Target Start/End: Original strand, 1374494 - 1374579
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||| || |||||||| ||||||||||||||| |||||| ||||||||   ||||||||||||  | |||||||| |||||||||    
T  1374494 ctgttaggattggcttaattgagcttatctactagcataaattttgtgattctgtttgggagaatatatgaaaacaacttatgaca 1374579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 614 - 679
Target Start/End: Complemental strand, 1706757 - 1706692
Alignment:
Q  614 tttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||||| |||||||||| ||||||||||||||||  ||||| ||||| || |||||||||||||||    
T  1706757 tttgagtttatctactgacataagttttgtgagacggtttgagagaaattatgaaaacagcttatg 1706692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 621 - 682
Target Start/End: Complemental strand, 2244179 - 2244118
Alignment:
Q  621 ttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||| |||||||||| ||| | |||||||||||| |||| ||||||||||||||||    
T  2244179 ttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgaca 2244118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 587 - 680
Target Start/End: Complemental strand, 25571421 - 25571328
Alignment:
Q  587 gttttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    |||||||| ||||||||| |||||||||||||| |||||||||| ||||||||   ||| | ||||| |||||| || || |||||| ||||||    
T  25571421 gttttagggcctgtttggattggcttatttgagtttatctactgacataagttacatgaaactgtttaggagaacttatggaaacagtttatga 25571328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 685 - 766
Target Start/End: Original strand, 54069483 - 54069564
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgctt 766  Q
    ||||||||||| |||||||||||| || |||||||| | |||   ||||||||||| |||| ||||||||||||||| ||||    
T  54069483 ttatagcatatacaaaaacaatttaacattattttatcttttgatataaaaatagcatatgcaagcttatacataagtgctt 54069564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 697 - 773
Target Start/End: Original strand, 4306227 - 4306303
Alignment:
Q  697 caaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| ||||||||| ||| |||  |||| ||||| ||||||| || ||||| |||||||||||||||||    
T  4306227 caaaaacaatttaactttatttgaccctttgtcatagaaataacttatgtcagtttatatataagcgcttatcatga 4306303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 600 - 683
Target Start/End: Complemental strand, 19305075 - 19304991
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagt-tttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||| |||||||||| ||||||| || ||||||  ||||||||||||| |||||||| || || ||||||||||||||||    
T  19305075 tttggattgacttatttgagattatctattgacataagcatttgtgagattgtgtgggagaatttgtggaaacagcttatgacat 19304991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 684 - 760
Target Start/End: Original strand, 25904275 - 25904351
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataa 760  Q
    ||||||||| || ||||| |||||| ||||||||||| | ||| |  ||||||||||||||||||||||||| ||||    
T  25904275 cttatagcaaatacaaaatcaatttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataa 25904351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 682
Target Start/End: Original strand, 39011059 - 39011131
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||||||| | ||||||||| | ||||||  |||||||||||  | ||||||||||||||||||    
T  39011059 cttatttgagcttatcttcgggcataagtatcgtgagacagtttgggagaacatatgaaaacagcttatgaca 39011131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 682
Target Start/End: Original strand, 40830947 - 40831033
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttga-aaacagcttatgaca 682  Q
    ||||||||| |||||| ||||||||||||||| | ||||||||||||||||| |||| || |||| || ||| |||||||||| ||||    
T  40830947 cctgtttggattggctaatttgagcttatcta-ttgcataagttttgtgagactgttcggaagaaattatgagaaacagcttacgaca 40831033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 685 - 772
Target Start/End: Original strand, 55414486 - 55414573
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatg 772  Q
    |||||||||||||||||| || || ||||||||||| | ||| | ||| |||||||||||| | ||||||| |||||  |||||||||    
T  55414486 ttatagcatatgcaaaaaaaaattaactttattttatcttttccaatagaaatagcttatgcacgcttataaataagaacttatcatg 55414573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 684 - 754
Target Start/End: Complemental strand, 9760445 - 9760375
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttat 754  Q
    ||||||||||||  ||||| ||||| ||||||||||| | ||||| ||||||||| |||||| ||||||||    
T  9760445 cttatagcatattaaaaaagaatttaactttattttatctttttcaataaaaataacttatgaaagcttat 9760375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 611 - 673
Target Start/End: Complemental strand, 40174695 - 40174633
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacag 673  Q
    ||||||||| |||||||||  |||||||||||||||| ||||||||| || || |||||||||    
T  40174695 ttatttgagtttatctactaacataagttttgtgagactgtttgggataacttatgaaaacag 40174633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 22662149 - 22662076
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||||||||||||||| | ||||||| |||||| |||||||| ||| || ||||| ||| |||||||||    
T  22662149 cttatctgagcttatctactgacgtaagtttagtgagactgtttgggggaacttatgaaatcagtttatgacat 22662076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 22666628 - 22666555
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| ||||||||||||||| | ||||||| |||||| |||||||| ||| || ||||| ||| |||||||||    
T  22666628 cttatctgagcttatctactgacgtaagtttagtgagactgtttgggggaacttatgaaatcagtttatgacat 22666555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 685 - 762
Target Start/End: Original strand, 31076452 - 31076529
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagc 762  Q
    ||||||||||| |||||||| ||| |  |||||||| | ||| |  ||||||||||||||| ||||||||||||||||    
T  31076452 ttatagcatatacaaaaacagtttaaacttattttatcttttgctctaaaaatagcttatgcaagcttatacataagc 31076529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 704 - 773
Target Start/End: Complemental strand, 31851439 - 31851370
Alignment:
Q  704 aatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||| ||||||||||| |||||   ||||||||||||||||| ||||| |||||||  |||||||||||    
T  31851439 aatttaactttattttatcatttgttataaaaatagcttatgtgagcttctacataaatgcttatcatga 31851370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 637
Target Start/End: Complemental strand, 38478865 - 38478824
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataag 637  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  38478865 cctgtttggattggcttatttgagcatatctactggcataag 38478824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 670
Target Start/End: Original strand, 49003972 - 49004033
Alignment:
Q  609 gcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaa 670  Q
    ||||||||||||||||||||| || |||||||||||||| | |||| ||||| || ||||||    
T  49003972 gcttatttgagcttatctactagcttaagttttgtgagactatttgagagaacttatgaaaa 49004033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 598 - 682
Target Start/End: Original strand, 21043155 - 21043239
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||| |||||||||| ||| |||| ||||| |   |||||||| ||||||||||| ||| || |||||||||||||||    
T  21043155 tgtttggattgacttatttgagtttacctacaggcatgaaacttgtgagactgtttgggagaggttatggaaacagcttatgaca 21043239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 730 - 766
Target Start/End: Original strand, 33587065 - 33587101
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgctt 766  Q
    |||||||||||||||| ||||||||||||||||||||    
T  33587065 ataaaaatagcttatgcaagcttatacataagcgctt 33587101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 611 - 683
Target Start/End: Complemental strand, 56249661 - 56249589
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| | |||||||  || |||||||||||||||||||||||| | || || | |||||||||||||||||    
T  56249661 ttatttcatcttatcttatgccataagttttgtgagattgtttggaacaacttatcaaaacagcttatgacat 56249589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 682
Target Start/End: Complemental strand, 2386607 - 2386524
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||| ||| ||| |||||||||| |||||||||||| |||||||  |   |||| |||||||| |||||||| |||||||||    
T  2386607 gtttggattgacttgtttgagcttagctactggcataaattttgtgctacaatttgtgagaagttatgaaaacaacttatgaca 2386524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 683
Target Start/End: Original strand, 7367972 - 7368059
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| ||| |||||||||| |||||||| |||||||    |||||||| |||||||||||  |  |||||||||||||||||||    
T  7367972 ctgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacat 7368059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 637
Target Start/End: Original strand, 29126182 - 29126221
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataag 637  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  29126182 tgtttggattggcttatttgagcttatctaccggcataag 29126221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 636
Target Start/End: Complemental strand, 1075601 - 1075571
Alignment:
Q  606 ttggcttatttgagcttatctactggcataa 636  Q
    |||||||||||||||||||||||||||||||    
T  1075601 ttggcttatttgagcttatctactggcataa 1075571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 621 - 683
Target Start/End: Complemental strand, 20719831 - 20719769
Alignment:
Q  621 ttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| |||||||||||||| || | ||||| |||| ||  ||||||||||||||||||    
T  20719831 ttatctactagcataagttttgtgcgactatttggaagaacttaagaaaacagcttatgacat 20719769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 55302402 - 55302352
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgag 646  Q
    |||||| || || |||||||| |||||||||| ||||||||||||||||||    
T  55302402 cctgttaggatttgcttattttagcttatctaatggcataagttttgtgag 55302352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 670
Target Start/End: Original strand, 55414330 - 55414404
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaa 670  Q
    ||||||||| ||| ||||||||||  ||||||||||||||| ||||||||   ||||| |||||| || ||||||    
T  55414330 cctgtttggattgacttatttgagagtatctactggcataatttttgtgatgctgtttaggagaatttatgaaaa 55414404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 15177267 - 15177356
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||| ||  || |||||||| || |||||||| | ||  | || ||||||||||||| ||||||||||||| | |||||||||||    
T  15177267 cttatagcacatagaagaacaatttaacgttattttatctttagctattaaaatagcttatgcaagcttatacatacgtgcttatcatga 15177356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 34430629 - 34430702
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||| |||| ||||||||||||||  | |||| || |||| || | ||||||||||| |||||    
T  34430629 cttatttgagcttatttactagcataagttttgtgcaactgttcggaagaacttataaaaacagcttaagacat 34430702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 49003806 - 49003879
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||| |||| | |||||||||||| |  |||||||||||  | |||||| ||| ||||||||    
T  49003806 cttatttgagcttatccactgacgtaagttttgtgaaacggtttgggagaaaatatgaaaagagcgtatgacat 49003879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 657
Target Start/End: Original strand, 53294031 - 53294092
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttggga 657  Q
    ||||||||| ||| || ||||| |||||||||||| ||| |||||||| ||| |||||||||    
T  53294031 cctgtttggattgactaatttgtgcttatctactgacatgagttttgtaagactgtttggga 53294092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 607 - 683
Target Start/End: Original strand, 1058005 - 1058081
Alignment:
Q  607 tggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||||||||  |||||||||||||||| |||||||||||| |||||||||| |||||||||||    
T  1058005 tggcttatttgagcttatctacttacataagttttgtgagactgtttgggagaacttttgaaaactgcttatgacat 1058081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 684 - 771
Target Start/End: Original strand, 1058139 - 1058226
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    |||||||||||| ||||||||  || |||||||||||  |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  1058139 cttatagcatatacaaaaacagattaactttattttatgatttgctataaaaatagcttatgtaagcttatacataagcgcttatcat 1058226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 596 - 678
Target Start/End: Original strand, 30251371 - 30251453
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||  |||||||||||||    
T  30251371 cctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttat 30251453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 682
Target Start/End: Original strand, 36963272 - 36963357
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||   |||||||||| |||||    
T  36963272 ctgtttggattggcttatttgagctaatctactggcataagttttgtgagactgtttgggagaacttacaaaaacagcttttgaca 36963357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 611 - 682
Target Start/End: Complemental strand, 26771403 - 26771332
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||||||| || ||||||||||||||||||    
T  26771403 ttatctgagcttatctacgggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgaca 26771332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 610 - 683
Target Start/End: Complemental strand, 27028970 - 27028897
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||||||| || ||||||||||||| |||||    
T  27028970 cttatttgagtttatccactggcataagtttagtgagattgtttgggagaaattctgaaaacagcttaggacat 27028897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 610 - 682
Target Start/End: Original strand, 35534544 - 35534616
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||||||||||  |||||||||||||||| |||||| ||||| || ||||||||||||||||||    
T  35534544 cttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgaca 35534616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 591 - 682
Target Start/End: Original strand, 35643900 - 35643991
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||| |||||| || |||||||||||| |||||||||||||||||| |||||||||| ||||||||| || || |||||| || ||||||||    
T  35643900 tagggcctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgaca 35643991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 590 - 673
Target Start/End: Original strand, 43717845 - 43717928
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacag 673  Q
    ||||| ||| ||||| |||||||||||||||||||||| || |||||||||||||||| | |||||||||| || |||||||||    
T  43717845 ttagggcctatttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacag 43717928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 609 - 683
Target Start/End: Original strand, 31716157 - 31716231
Alignment:
Q  609 gcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||||||| |||||||  |||| ||||| ||||| |||||| ||||||||||||||||||||||    
T  31716157 gcttatttgagcttatctattggcatattttttttgagactgtttcggagaacttttgaaaacagcttatgacat 31716231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 38648504 - 38648418
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||| || ||||||||||| || |||||||||| |||||||||||||||| |||||||||||  || ||||||||||| ||||||    
T  38648504 cctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgaca 38648418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 589 - 682
Target Start/End: Complemental strand, 15180699 - 15180607
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||||| |||||||||||||| |||||||||| |||||||||| ||||| | ||| |||||| || ||||||||| || |||||    
T  15180699 tttaggacctgtttggattggcttatttgagtttatctactgccataagttttatgagact-ttttggagaatttctgaaaacaggttttgaca 15180607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 596 - 677
Target Start/End: Original strand, 43045642 - 43045723
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctta 677  Q
    ||||||||| ||||||||||| |||||||||||| ||||||| ||||||||| ||||| |||||  || |||||||||||||    
T  43045642 cctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagctta 43045723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 668 - 760
Target Start/End: Original strand, 12497280 - 12497372
Alignment:
Q  668 aaacagcttatgacatcttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataa 760  Q
    |||||| | |||||| |||||||||||| ||||||||| || ||||||||||| | ||| | |||||||| ||||||| ||||||||||||||    
T  12497280 aaacagttaatgacagcttatagcatatacaaaaacaagttaactttattttatcttttgctataaaaatggcttatgcaagcttatacataa 12497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 683
Target Start/End: Original strand, 13958003 - 13958088
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| |||||||| ||||| ||||||| ||||||||||||  |||| ||||||||||||| |||||||||||  |||||||||    
T  13958003 cctgtttggattggcttacttgagtttatctattggcataagttt--tgaggttgtttgggagaacttttgaaaacaaattatgacat 13958088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 596 - 660
Target Start/End: Complemental strand, 38602480 - 38602416
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||| ||| ||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  38602480 cctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaa 38602416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 598 - 657
Target Start/End: Original strand, 9130238 - 9130297
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttggga 657  Q
    ||||||| || ||||||||||||||||||||||||||||||||||||||| | |||||||    
T  9130238 tgtttggattagcttatttgagcttatctactggcataagttttgtgagactatttggga 9130297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 679 - 773
Target Start/End: Original strand, 10758316 - 10758410
Alignment:
Q  679 gacatcttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||| |||||||||||| |||||||||||| |||||||||||  |||| | ||| |||||| ||| || ||||||||||||| | ||||||||||    
T  10758316 gacaacttatagcatatacaaaaacaatttaactttattttatgatttgctatagaaatagtttacgtgagcttatacataatcacttatcatga 10758410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 589 - 683
Target Start/End: Complemental strand, 40981264 - 40981170
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| || |||| | |||||||||||| ||||||||||||| ||| |||||| |||  ||||||||||||  |||||||||| ||||||||||    
T  40981264 tttagggcccgtttagattggcttatttgggcttatctactggtatatgttttgcgaggctgtttgggagaacatttgaaaacaacttatgacat 40981170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 693 - 773
Target Start/End: Original strand, 14956369 - 14956449
Alignment:
Q  693 tatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||||||| |  |||||| | | ||| | |||||||||||||||| ||||||||||||||| |||||||||||    
T  14956369 tatgcaaaaacaatttaatgttatttcatcttttacaataaaaatagcttatgcaagcttatacataagtgcttatcatga 14956449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 606 - 678
Target Start/End: Complemental strand, 18133799 - 18133727
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||||| |||||||||||| | ||||||||||||||| |||||||||||  || ||||| ||||||||    
T  18133799 ttggcttatttaagcttatctactagtataagttttgtgagactgtttgggagagcttgtgaaatcagcttat 18133727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 620 - 683
Target Start/End: Complemental strand, 1930164 - 1930101
Alignment:
Q  620 cttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||| |||||||||||||| ||| |||||||||| || ||||||||| |||||||||    
T  1930164 cttatctactgacataagttttgtgacattatttgggagaacttgtgaaaacagtttatgacat 1930101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 676
Target Start/End: Complemental strand, 12976360 - 12976285
Alignment:
Q  601 ttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    |||| |||||||||||||||||||||||| ||||||| ||||||||| ||||| | |||| || ||| ||||||||    
T  12976360 ttggtttggcttatttgagcttatctactagcataaggtttgtgagactgtttagtagaacttatgagaacagctt 12976285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 683
Target Start/End: Original strand, 14280339 - 14280426
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| ||| |||||||||  ||||||||||||||||| ||||||| ||||||||||| ||| || ||||||||  |||||||||    
T  14280339 ctgtttggattgacttatttgattttatctactggcataagtttttgtgtgattgtttgggtgaatttatgaaaacaatttatgacat 14280426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 730 - 773
Target Start/End: Complemental strand, 38750317 - 38750274
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  38750317 ataaaaatagcttatgcaagcttatacataagcgcttatcatga 38750274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 599 - 682
Target Start/End: Original strand, 40859703 - 40859785
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||| ||||||||||||||||||||| ||  |||||||||||||||  ||||| |||| | || ||||||||||||||||||    
T  40859703 gtttggattggcttatttgagcttatctgctaacataagttttgtgaggctgttttggag-acttatgaaaacagcttatgaca 40859785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 683
Target Start/End: Complemental strand, 11376846 - 11376768
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||||||||||  ||||||| |||||||| | |||||||||| || |||||| ||||| ||||||    
T  11376846 ttggcttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgacat 11376768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 611 - 673
Target Start/End: Original strand, 12497004 - 12497066
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacag 673  Q
    |||||||||||||||| |||||||||||||||||||| |||||| ||||| || | |||||||    
T  12497004 ttatttgagcttatctcctggcataagttttgtgagactgtttgagagaacttctaaaaacag 12497066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 29818863 - 29818925
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||| ||||| ||||||||||||||||||  |||||||||||||||| ||||| ||||||    
T  29818863 tgtttggattggcatatttgagcttatctactatcataagttttgtgagactgtttcggagaa 29818925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 660
Target Start/End: Complemental strand, 44792807 - 44792745
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||| |||||||||||||||||||||||||| |||| || ||||||| ||||| ||||||    
T  44792807 tgtttggattggcttatttgagcttatctactgggataaattatgtgagactgttttggagaa 44792745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 704 - 773
Target Start/End: Complemental strand, 12976198 - 12976129
Alignment:
Q  704 aatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||| |||||||||||   ||| | ||| ||||||||||||| ||||||||||||||||||||||||||    
T  12976198 aatttaactttattttatattttgctatagaaatagcttatgtgagcttatacataagcgcttatcatga 12976129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 32840917 - 32840990
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||| |||||||||||||||  || |||||||| |||| |||||||||||| || |||||||| ||||||||||    
T  32840917 cttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatgacat 32840990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 724 - 773
Target Start/End: Complemental strand, 38353315 - 38353266
Alignment:
Q  724 ttttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  38353315 ttttgcataaaaatagcttatgcaagcttatacataagcgattatcatga 38353266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 684 - 769
Target Start/End: Original strand, 42043410 - 42043495
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatc 769  Q
    |||||| ||||| |||||||||||| |||  |||||| | ||| | ||| ||||||| |||||||||||||||||||| |||||||    
T  42043410 cttatatcatatccaaaaacaatttaactgcattttatcttttgctatagaaatagcatatgtaagcttatacataagtgcttatc 42043495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 590 - 682
Target Start/End: Original strand, 900622 - 900713
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||||  |||| |||||||||||||| ||||| |||| ||||||||||| || || ||||||  ||  ||||||||||||||||    
T  900622 ttaggacctgtttgaattggtttatttgagcttatatactgacatatgttttgtgagactgattaggagaa-cttgaaaaacagcttatgaca 900713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 682
Target Start/End: Original strand, 10758188 - 10758260
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||||||| ||  |||||||||||||||| ||||||  |||| || ||||||||||||||||||    
T  10758188 cttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgaca 10758260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 680
Target Start/End: Complemental strand, 33808455 - 33808372
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    ||||||||| ||| |||||| |||||||| || |||| |||||||| || ||||||||||||||| || |||||| |||||||||    
T  33808455 cctgtttggattgacttattcgagcttatgtagtggc-taagttttttgtgattgtttgggagaacttatgaaaatagcttatga 33808372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 697 - 773
Target Start/End: Original strand, 35534689 - 35534763
Alignment:
Q  697 caaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| ||||||||||| | ||||| ||||||||| ||||||||||||||| ||| ||||||||| ||||    
T  35534689 caaaaacaatttaactttattttatc-ttttctataaaaatatcttatgtaagcttatgcat-agcgcttataatga 35534763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 619 - 678
Target Start/End: Complemental strand, 28763498 - 28763439
Alignment:
Q  619 gcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||| |  |||||||||||||||| |||||||||||| || ||||||||||||||    
T  28763498 gcttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttat 28763439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 597 - 680
Target Start/End: Original strand, 42893408 - 42893491
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    |||||||| ||  |||||||||| |||||||| ||||||| |||||||  | |||||||||||| || | ||||||||||||||    
T  42893408 ctgtttggattaacttatttgagtttatctaccggcataatttttgtgctagtgtttgggagaacttataaaaacagcttatga 42893491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 660
Target Start/End: Complemental strand, 1096641 - 1096579
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||| ||| |||||||||| |||| || || |||||||||||||||||| ||||||||||    
T  1096641 tgtttggattgacttatttgagtttatttagtgacataagttttgtgagattttttgggagaa 1096579  T

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Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 683
Target Start/End: Original strand, 2487927 - 2488013
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| |||||||||||||| | |||||||| ||||||   |||||||| |||||||||||| || |||||||| ||||| ||||    
T  2487927 tgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataacat 2488013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 681
Target Start/End: Complemental strand, 16162913 - 16162827
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    ||||||||| |||||||||||||| ||||||||| ||||||    |||||||| |||||| || || || |||||||||||||||||    
T  16162913 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgac 16162827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 678
Target Start/End: Complemental strand, 44843440 - 44843358
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||| ||| |||||| ||| ||||| ||| ||||||||||||||||| |  |||||| ||||  ||||||||||||||    
T  44843440 cctgtttggattgacttattggagtttatccacttgcataagttttgtgagacttattgggataagtaatgaaaacagcttat 44843358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 697 - 766
Target Start/End: Original strand, 16825615 - 16825684
Alignment:
Q  697 caaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgctt 766  Q
    |||||||||||| || |||||||| | ||| | |||| ||||||||||| ||| ||||||||||||||||    
T  16825615 caaaaacaatttaacattattttatcctttactataagaatagcttatgcaaggttatacataagcgctt 16825684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 649
Target Start/End: Complemental strand, 32213272 - 32213219
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagatt 649  Q
    ||||||||| ||| ||||||||||||||| |||||  |||||||||||||||||    
T  32213272 cctgtttggattgtcttatttgagcttatatactgatataagttttgtgagatt 32213219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 680
Target Start/End: Complemental strand, 38750495 - 38750426
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||  |||| || ||| |||| |||||||    
T  38750495 ttatttgagtttatctacttgcataagttttgtgagattatttgaaagaacttatgagaacaccttatga 38750426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 689 - 761
Target Start/End: Original strand, 25930624 - 25930696
Alignment:
Q  689 agcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataag 761  Q
    ||||||| |||||||| ||| | ||||||| | | ||| | ||| ||||||||||||||||||||||||||||    
T  25930624 agcatatacaaaaacattttaattttatttcatcctttcctatagaaatagcttatgtaagcttatacataag 25930696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 672
Target Start/End: Complemental strand, 27493090 - 27493014
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    ||||||||| ||  ||||||||||||||||| |||| ||||||||||| | ||| |||||||||  || ||||||||    
T  27493090 cctgtttggattaacttatttgagcttatctgctggtataagttttgtcatattatttgggagagcttatgaaaaca 27493014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 606 - 678
Target Start/End: Complemental strand, 41589729 - 41589657
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    |||| |||||||||||| ||||||| |||||| ||| ||||| ||||| |||||| || |||||||| |||||    
T  41589729 ttggtttatttgagcttgtctactgacataagctttttgagactgttttggagaacttatgaaaacaacttat 41589657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 653
Target Start/End: Complemental strand, 5404733 - 5404686
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgttt 653  Q
    |||| ||||| ||||||| ||||| |||||||||||||||||||||||    
T  5404733 ttggattattagagcttaactactagcataagttttgtgagattgttt 5404686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 596 - 678
Target Start/End: Original strand, 6526169 - 6526252
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttat 678  Q
    ||||||||| ||| |||||| |||| ||||||||||||||||   ||||||||||||||| ||||| ||  ||||||| |||||    
T  6526169 cctgtttggattgacttattcgagcctatctactggcataagcccttgtgagattgtttgagagaacttaggaaaacaacttat 6526252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 642 - 685
Target Start/End: Complemental strand, 10722730 - 10722687
Alignment:
Q  642 gtgagattgtttgggagaagttttgaaaacagcttatgacatct 685  Q
    ||||||||||||||||||| || || ||||||||||||||||||    
T  10722730 gtgagattgtttgggagaatttatggaaacagcttatgacatct 10722687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 597 - 660
Target Start/End: Original strand, 18591894 - 18591957
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    |||||||  |||| ||| ||||||||||||| ||| ||||||||| ||||| ||||||||||||    
T  18591894 ctgtttgaattggtttaattgagcttatctattggtataagttttatgagactgtttgggagaa 18591957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 730 - 773
Target Start/End: Complemental strand, 27028798 - 27028755
Alignment:
Q  730 ataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||| |||||||||||||||||| |||| ||||||||||    
T  27028798 ataaaaataacttatgtaagcttatacaaaagcacttatcatga 27028755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 632 - 683
Target Start/End: Complemental strand, 27754520 - 27754469
Alignment:
Q  632 cataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||| | |||||||||| || ||||||||| |||||||||    
T  27754520 cataagttttgtgagactatttgggagaacttatgaaaacagtttatgacat 27754469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 644
Target Start/End: Original strand, 3536876 - 3536910
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtg 644  Q
    |||||||||||||||||||||||||||| ||||||    
T  3536876 cttatttgagcttatctactggcataagctttgtg 3536910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 659
Target Start/End: Complemental strand, 6950461 - 6950411
Alignment:
Q  610 cttatttgagcttatctactggcat-aagttttgtgagattgtttgggaga 659  Q
    |||||||||| |||||||||||||| ||  |||||||||||||||||||||    
T  6950461 cttatttgagtttatctactggcataaacatttgtgagattgtttgggaga 6950411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 625 - 683
Target Start/End: Original strand, 16210828 - 16210886
Alignment:
Q  625 ctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||||||| |||| |||||||| ||  ||||||| || |||||||    
T  16210828 ctactggcataagttttgtgaggttgtctgggagaaattaagaaaacaactcatgacat 16210886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 607 - 680
Target Start/End: Complemental strand, 24326173 - 24326099
Alignment:
Q  607 tggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    ||||| |||||||||||||||||||||||||   |||||||| |||||||||||  || || |||||| ||||||    
T  24326173 tggctaatttgagcttatctactggcataagcacttgtgagactgtttgggagagcttatggaaacagtttatga 24326099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 713 - 771
Target Start/End: Complemental strand, 32976036 - 32975978
Alignment:
Q  713 ttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    |||||||| | ||| | |||||||||||||||| ||||||||| |||||| ||||||||    
T  32976036 ttattttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcat 32975978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 676
Target Start/End: Original strand, 35749501 - 35749567
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    |||| ||||||||||||| || ||||||||||| |||  |||||| ||||| || ||||||||||||    
T  35749501 cttaattgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagctt 35749567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 660
Target Start/End: Complemental strand, 42052194 - 42052132
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||| ||| ||||| | | ||||||||||||||||||||||||  || ||||||||||||    
T  42052194 tgtttggattgacttatctaaacttatctactggcataagttttgtcggactgtttgggagaa 42052132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 680
Target Start/End: Original strand, 42043291 - 42043356
Alignment:
Q  615 ttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    |||||||||| ||||| |||||||||| ||||| |||| |||||||  | || |||||||||||||    
T  42043291 ttgagcttatttactgtcataagttttatgagactgttcgggagaacatatggaaacagcttatga 42043356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 606 - 682
Target Start/End: Original strand, 31365115 - 31365191
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||| || ||||| ||||||||||||    
T  31365115 ttggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgaca 31365191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 606 - 677
Target Start/End: Original strand, 22893 - 22964
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctta 677  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  22893 ttggcttatttgaacttgtctactggcataagttttgtgagattgtttaggagaagttatgaaaacagctta 22964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 599 - 679
Target Start/End: Original strand, 24085258 - 24085338
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||| || || |||||| || |||||||||||||||    
T  24085258 gtttggattggcttatttgagcttatctaccggcataagttttgtgagactggtttggagaacttatgaaaacagcttatg 24085338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 597 - 681
Target Start/End: Complemental strand, 39980881 - 39980797
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    |||||||| ||||||| |||||||||||||||| ||||||||||||||||| |||||  ||||| || |||||||||||||||||    
T  39980881 ctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgac 39980797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 600 - 683
Target Start/End: Complemental strand, 21367816 - 21367733
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| |||||||||||||| ||||||||  |||||||||||||| || |||||||||||| || |||||||||||||||||||    
T  21367816 tttggattggcttatttgagattatctaccagcataagttttgtgggactgtttgggagaacttatgaaaacagcttatgacat 21367733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 24684888 - 24684977
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||  | ||||||||| | ||||| ||||||||||||||||||| ||||| || |||||||||||||||    
T  24684888 cttatagcatatacaaaaacaattaaaatttattttatctttttctataaaaatagcttatgtaaacttatgcaaaagcgcttatcatga 24684977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 35959521 - 35959610
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||| ||||||| |||||| ||||| ||||||||||| | ||||| ||| ||||||||||||| ||||||||||||||| ||||||||||    
T  35959521 cttacagcatatacaaaaataatttaactttattttatccttttctatagaaatagcttatgtgagcttatacataagctcttatcatga 35959610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 685 - 773
Target Start/End: Complemental strand, 20880480 - 20880393
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||| |||||||||||| ||||  ||||| ||||| | ||||||||||||||||||||||||||||||||| ||||| ||||    
T  20880480 ttatagcatatacaaaaacaatttaacttg-ttttatcatttgctataaaaatagcttatgtaagcttatacataagcacttattatga 20880393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 684 - 770
Target Start/End: Complemental strand, 584051 - 583965
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatca 770  Q
    ||||||||||   |||||||||||| ||||||||||| ||||||| ||| ||||| ||||||||||||||||| ||||| |||||||    
T  584051 cttatagcatgaacaaaaacaatttaactttattttatcattttctatagaaataacttatgtaagcttatacgtaagcacttatca 583965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 599 - 677
Target Start/End: Complemental strand, 584196 - 584118
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctta 677  Q
    |||||| ||| |||||||||||||||||||| ||||||||| ||||||| ||||| |||||| || |||||||||||||    
T  584196 gtttggattgacttatttgagcttatctactagcataagttctgtgagactgttttggagaatttatgaaaacagctta 584118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 593 - 679
Target Start/End: Original strand, 9832669 - 9832755
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||||||||| | ||| ||||||||||||||| || || |||||||||||| | | |||||||||||| ||||||||||||||||||    
T  9832669 ggacctgtttagattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatg 9832755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 684 - 773
Target Start/End: Complemental strand, 20170528 - 20170439
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||| || |||||||| | ||| |  |||||||||||| || ||||| |||||||||||||||||||||    
T  20170528 cttatagcatatacaaaaacaatttaacattattttatcttttgcagtaaaaatagcttgtgcaagctgatacataagcgcttatcatga 20170439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 593 - 682
Target Start/End: Complemental strand, 20880632 - 20880543
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||| ||||||| |||||||||||||||||||||||| ||||||||||  | ||| | ||||||||||  | ||||||||||||||||||    
T  20880632 ggacatgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgaca 20880543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 30956691 - 30956780
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||| ||| |||||||||||| ||||||||||| | ||| | ||| ||||||||||||||||||||| |||||  |||||||||||    
T  30956691 cttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatga 30956780  T

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Target: chr3; HSP #15
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 30972503 - 30972592
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||| ||| |||||||||||| ||||||||||| | ||| | ||| ||||||||||||||||||||| |||||  |||||||||||    
T  30972503 cttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatga 30972592  T

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Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 606 - 682
Target Start/End: Original strand, 31365236 - 31365312
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||| ||||||| |||||||| |||||||| | |||||||||||| || |||| |||||||||||||    
T  31365236 ttggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgaca 31365312  T

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Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 592 - 682
Target Start/End: Complemental strand, 20257694 - 20257603
Alignment:
Q  592 aggacctgtttgggttggcttatttgagctt-atctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||| |||||||||||||| || |||||| | ||||| |||||||||| |||||||||||| || ||||| ||||| ||||||    
T  20257694 aggacctgtttggattggcttatttgagttttatctacagccataaattttgtgagactgtttgggagaacttatgaaagcagctaatgaca 20257603  T

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Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 596 - 670
Target Start/End: Complemental strand, 47132469 - 47132397
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaa 670  Q
    ||||||||| |||||||||||||||||||||||||||  ||||||||||||| ||||| |||||| || ||||||    
T  47132469 cctgtttggattggcttatttgagcttatctactggc--aagttttgtgagactgttttggagaacttatgaaaa 47132397  T

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Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 600 - 673
Target Start/End: Original strand, 18405752 - 18405825
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacag 673  Q
    ||||| |||| |||||||||||||||||||| |||||||||||||||| ||||||  |||| || |||||||||    
T  18405752 tttggattggtttatttgagcttatctactgacataagttttgtgagactgtttgcaagaacttatgaaaacag 18405825  T

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Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 613 - 682
Target Start/End: Complemental strand, 30444029 - 30443960
Alignment:
Q  613 atttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||||||||||||| ||| |||||| ||||||| |||  || ||||||||||||||||||    
T  30444029 atttgagcttatctactggcataaatttggtgagactgtttggtagagcttatgaaaacagcttatgaca 30443960  T

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Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 590 - 683
Target Start/End: Original strand, 16072952 - 16073047
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgaga--ttgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||| ||| |||||||||||||||||| || |||||||||||||| |  || |||| ||||| || | ||||||| |||||||||    
T  16072952 ttaggacctgtttggattgacttatttgagcttatctaatgacataagttttgtgatactttttttgagagaacttgtaaaaacagtttatgacat 16073047  T

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Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 683
Target Start/End: Original strand, 402459 - 402546
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||| | |||||||| ||||| |||  |||||||||||  ||| ||||||||||||  | |||||||||||||||||||    
T  402459 cctgtttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacat 402546  T

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Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 592 - 683
Target Start/End: Complemental strand, 38902222 - 38902132
Alignment:
Q  592 aggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||  ||| || ||||||||||||||||||||||||||||||  | | ||||||| |||| || |||||||||| ||||||||    
T  38902222 aggacctgtttgaattgcctcatttgagcttatctactggcataagttttg-caaactgtttggaagaatttatgaaaacagcatatgacat 38902132  T

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Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 608 - 683
Target Start/End: Original strand, 46778120 - 46778195
Alignment:
Q  608 ggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||||| || |||||||| |||||||| |  ||||||||||| || |||||||| ||||||||||    
T  46778120 ggcttatttgagcttatttagtggcataaattttgtgaaaccgtttgggagaacttatgaaaacaacttatgacat 46778195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 599 - 682
Target Start/End: Original strand, 51929277 - 51929360
Alignment:
Q  599 gtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||| ||| ||||||||| ||||| |||||||||||||||||||| | | |||| ||||| || ||||||||| ||||||||    
T  51929277 gtttggattgacttatttgaccttatttactggcataagttttgtgatactatttgagagaatttctgaaaacagattatgaca 51929360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 682
Target Start/End: Original strand, 13715501 - 13715575
Alignment:
Q  608 ggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||| |||||||||| ||||| ||||||||||| ||||||| |||| ||   ||||||||||||||||    
T  13715501 ggcttatttgatcttatctactagcatatgttttgtgagactgtttggtagaacttcctaaaacagcttatgaca 13715575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 596 - 654
Target Start/End: Original strand, 20170631 - 20170689
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttg 654  Q
    ||||||||| |||||||||||||||||||||| || ||||||||| |||||| ||||||    
T  20170631 cctgtttggattggcttatttgagcttatctagtgacataagtttagtgagactgtttg 20170689  T

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Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 683
Target Start/End: Complemental strand, 26878352 - 26878266
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||  |||||||||| |||||||||||||| ||||||||  |||| | |||||| ||||| || |||||| ||||||||||||    
T  26878352 ctgtttgaattggcttattcgagcttatctactgacataagttgcgtgaaactgtttgagagaacttgtgaaaatagcttatgacat 26878266  T

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Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 699 - 773
Target Start/End: Original strand, 46778307 - 46778381
Alignment:
Q  699 aaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| ||||||||||| |  || | ||| ||||||||||| |||||| |||||||||||||||||||||    
T  46778307 aaaacaatttaactttattttatctcttgctatagaaatagcttatataagctgatacataagcgcttatcatga 46778381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 590 - 683
Target Start/End: Original strand, 53762305 - 53762399
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagt-tttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| |||| |||| |||| ||||||||||||||||||| |||||| |   ||| ||| |||| ||||||| ||||||||||||||||||||||    
T  53762305 ttagggcctgcttggattggtttatttgagcttatctactagcataaatgcctgtaagactgttagggagaaattttgaaaacagcttatgacat 53762399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 614 - 683
Target Start/End: Original strand, 3845498 - 3845567
Alignment:
Q  614 tttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||||||||||||||||||| ||||||  ||||  | |||| |||| |||||||||    
T  3845498 tttgagcttatctactggcataagttttgtgagactgtttgatagaacatctgaagacagattatgacat 3845567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 683
Target Start/End: Complemental strand, 5436215 - 5436138
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||| ||||| |||| |||||||||||||| | ||||| | |||| || |||||||| ||||||||||    
T  5436215 ttggcttatttgagtttatcaactgtcataagttttgtgacactgttttgaagaacttctgaaaacaacttatgacat 5436138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 654
Target Start/End: Original strand, 25447163 - 25447220
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttg 654  Q
    |||||||| ||| |||||||||| |||||||||| |||||||||||||||| ||||||    
T  25447163 ctgtttggattgacttatttgagtttatctactgacataagttttgtgagactgtttg 25447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 34610737 - 34610810
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||||||||| ||||||||||||   | | |||||||||| || ||||||| |||||||||||    
T  34610737 cttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatgacat 34610810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 683
Target Start/End: Original strand, 39602138 - 39602215
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||||||| |||||||||| |||||||||||  | ||||| |||  || |||| ||||||||||||||    
T  39602138 ttggcttatttgagcttagctactggcatcagttttgtgaggctatttggaagagcttatgaagacagcttatgacat 39602215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 596 - 672
Target Start/End: Original strand, 42799883 - 42799960
Alignment:
Q  596 cctgtttgggttggcttatttgagc-ttatctactggcataagttttgtgagattgtttgggagaagttttgaaaaca 672  Q
    ||||||||| ||||||||||||||| |||||||||| |||| ||||||||| | | |||||||||| || ||||||||    
T  42799883 cctgtttggattggcttatttgagctttatctactgacatatgttttgtgaaactctttgggagaacttatgaaaaca 42799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 614 - 681
Target Start/End: Original strand, 3776325 - 3776393
Alignment:
Q  614 tttgagcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    |||||| ||||||||||||||||||  |||||||| |||||| ||||| || |||||||||||||||||    
T  3776325 tttgagtttatctactggcataagtaattgtgagaatgtttgagagaacttatgaaaacagcttatgac 3776393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 682
Target Start/End: Original strand, 24684753 - 24684825
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||||||||||||||||||||| |||||   |||||  ||| || |||||||| |||||||||    
T  24684753 cttatttgagcttatctactggcataagttttttgagacattttggttgaacttatgaaaacaacttatgaca 24684825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 686 - 773
Target Start/End: Complemental strand, 37689234 - 37689149
Alignment:
Q  686 tatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| |||||||||||||  ||||||||| | ||| | ||| ||||||||||||| | ||||||| ||||| ||||||||||    
T  37689234 tatagcatatacaaaaacaatttc--tttattttatcttttgctatagaaatagcttatgtgaacttatacgtaagcacttatcatga 37689149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 688 - 771
Target Start/End: Complemental strand, 19983780 - 19983698
Alignment:
Q  688 tagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    ||||||||| ||||| ||||  ||||||||| | | ||||| ||| ||||| ||||||||||||||||||||| ||||||||||    
T  19983780 tagcatatgtaaaaataattaaactttattt-atctttttctatagaaataacttatgtaagcttatacataaacgcttatcat 19983698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 597 - 681
Target Start/End: Original strand, 36507010 - 36507096
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcata--agttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    |||||||| |||||||||||||| ||||||||||  |||  || ||||||||| |||||||||| | || |||||| ||||||||||    
T  36507010 ctgtttggattggcttatttgagtttatctactgatataagagctttgtgagactgtttgggaggacttctgaaaatagcttatgac 36507096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 679
Target Start/End: Original strand, 46886609 - 46886692
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||| |||| |||| |||||||||||||||| ||||||||| ||||| |||| |||||||| ||  |  |||||||||||||||    
T  46886609 cctgcttggattggtttatttgagcttatctgctggcataaattttgagagactgtttgggtgagctgatgaaaacagcttatg 46886692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 598 - 660
Target Start/End: Original strand, 26990144 - 26990206
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||| ||| ||||||||||||||||||||| |||| | |||| || ||||||||||||||    
T  26990144 tgtttggattgacttatttgagcttatctactgacataggctttgcgatattgtttgggagaa 26990206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 596 - 681
Target Start/End: Original strand, 44014715 - 44014801
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagtt-ttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    ||||||||| |||||||||||||| ||||||||| ||||||    |||||||| |||||| || || || |||||||||||||||||    
T  44014715 cctgtttggattggcttatttgagtttatctactagcataaacacttgtgagactgtttgagaaaacttatgaaaacagcttatgac 44014801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 699 - 771
Target Start/End: Complemental strand, 466192 - 466120
Alignment:
Q  699 aaaacaatttcactttattttaccattttccataa-aaatagcttatgtaagcttatacataagcgcttatcat 771  Q
    |||||||||| |||||||||||| ||||| | ||| |||||| |||||||||||||| |||||| |||||||||    
T  466192 aaaacaatttaactttattttac-attttgcttaagaaatagattatgtaagcttatgcataagagcttatcat 466120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 732 - 773
Target Start/End: Original strand, 1508694 - 1508735
Alignment:
Q  732 aaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  1508694 aaaaatagtttatgcaagcttatacataagcgcttatcatga 1508735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 680
Target Start/End: Original strand, 28881691 - 28881760
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    ||||||||||||||||||||  |||   ||||||||||| |||||||||  || ||||||||||||||||    
T  28881691 ttatttgagcttatctactgatatagcatttgtgagattatttgggagagcttatgaaaacagcttatga 28881760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 638 - 683
Target Start/End: Original strand, 34637944 - 34637989
Alignment:
Q  638 ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||||||||||||| || |||||||||||||| ||||    
T  34637944 ttttgtgagattgtttgggagaacttatgaaaacagcttataacat 34637989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 49557023 - 49556966
Alignment:
Q  590 ttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgaga 647  Q
    ||||| ||| ||||| ||||||||| |||||||||| | |||||||||||||||||||    
T  49557023 ttagggcctatttggattggcttatctgagcttatcaagtggcataagttttgtgaga 49556966  T

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Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 53789526 - 53789615
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| | |||||| ||| | |||| || | | ||| | ||| |||||||||||||||||||| ||||||| |||||||||||    
T  53789526 cttatagcatataccaaaacattttaattttagttcatcttttcctatagaaatagcttatgtaagcttacacataagtgcttatcatga 53789615  T

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Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 607 - 643
Target Start/End: Complemental strand, 5448586 - 5448550
Alignment:
Q  607 tggcttatttgagcttatctactggcataagttttgt 643  Q
    |||||||||||||||||||||||| ||||||||||||    
T  5448586 tggcttatttgagcttatctactgacataagttttgt 5448550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 685 - 752
Target Start/End: Complemental strand, 849666 - 849599
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagctt 752  Q
    ||||||||||| |||||||||||| ||||||||||| | ||| | ||| ||||  |||||||||||||    
T  849666 ttatagcatattcaaaaacaatttaactttattttatcttttccgatagaaatgacttatgtaagctt 849599  T

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Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 677
Target Start/End: Original strand, 4495105 - 4495176
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctta 677  Q
    |||||| |||||||||| || | |||||||||||||||| | |||||||| | || ||| ||||||||||||    
T  4495105 ttggctcatttgagcttgtccagtggcataagttttgtggggttgtttggtataattttggaaaacagctta 4495176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 684 - 766
Target Start/End: Original strand, 18405896 - 18405979
Alignment:
Q  684 cttatagcatatgcaaaaacaatttca-ctttattttaccattttccataaaaatagcttatgtaagcttatacataagcgctt 766  Q
    |||||||||||| |||||| || |||| |  ||||||| | ||| | ||| ||||| |||||||||||||||||||||||||||    
T  18405896 cttatagcatatacaaaaaaaaattcaacgatattttatcttttcctatataaataacttatgtaagcttatacataagcgctt 18405979  T

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Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 683
Target Start/End: Complemental strand, 22203566 - 22203496
Alignment:
Q  612 tatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||| |||||||||||| | ||| | |||||||||| ||||||| |||| || |||||||||||||||||||    
T  22203566 tattcgagcttatctaccgacattaattttgtgagactgtttgg-agaacttatgaaaacagcttatgacat 22203496  T

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Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 646
Target Start/End: Original strand, 1820049 - 1820098
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgag 646  Q
    ||||||||| |||||||||||||||||||||  |||||||| |||||||||    
T  1820049 cctgtttggattggcttatttgagcttatcttatggcataa-ttttgtgag 1820098  T

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Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 699 - 773
Target Start/End: Complemental strand, 2719459 - 2719385
Alignment:
Q  699 aaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||||||||||||||   ||| |  || ||||||||| ||||||||||| | |||| |||||||||||    
T  2719459 aaaacaatttcactttattttatattttgctttagaaatagcttgtgtaagcttatgcgtaagtgcttatcatga 2719385  T

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Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 36630961 - 36631018
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgaga 647  Q
    |||||||||||||||  |||||||||||||||||||  |||||||| ||||| ||||||    
T  36630961 tttaggacctgtttgaattggcttatttgagcttat-aactggcattagtttcgtgaga 36631018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 621 - 683
Target Start/End: Complemental strand, 37389311 - 37389249
Alignment:
Q  621 ttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| | |||||||||||||||| | || ||||||| || |||||||| ||||||||||    
T  37389311 ttatctacagacataagttttgtgagactcttcgggagaacttatgaaaacaacttatgacat 37389249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 606 - 680
Target Start/End: Original strand, 42545325 - 42545399
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    ||||||||||||| || ||||| || ||| |||||||| ||| | |||||||||| |  ||||||||||||||||    
T  42545325 ttggcttatttgaactcatctagtgacattagttttgttagactatttgggagaactcatgaaaacagcttatga 42545399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 610 - 676
Target Start/End: Complemental strand, 43046803 - 43046738
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctt 676  Q
    ||||||||| |||||||| |  |||| ||||||||||| |||||||||||| || ||||||||||||    
T  43046803 cttatttgaacttatctatta-catatgttttgtgagactgtttgggagaacttatgaaaacagctt 43046738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 740 - 773
Target Start/End: Original strand, 139794 - 139827
Alignment:
Q  740 cttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||||||| ||||||||||||||||||    
T  139794 cttatgtaagcttatgcataagcgcttatcatga 139827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 682
Target Start/End: Complemental strand, 4401185 - 4401111
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||||||| | || || |||  |||||||| |||| ||||| |||| ||| |||||||||||||||||    
T  4401185 ttggcttatttgagcttgtttattgacat--gttttgtgggattctttggtagaattttggaaaacagcttatgaca 4401111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 685 - 754
Target Start/End: Original strand, 10704639 - 10704708
Alignment:
Q  685 ttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttat 754  Q
    |||||||| || |||||||||||| || | |||||| | ||| | |||||| ||||||||||||||||||    
T  10704639 ttatagcaaatacaaaaacaatttaacatcattttatcttttgctataaaagtagcttatgtaagcttat 10704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 587 - 628
Target Start/End: Complemental strand, 32663800 - 32663759
Alignment:
Q  587 gttttaggacctgtttgggttggcttatttgagcttatctac 628  Q
    ||||||||  |||||||| |||||||||||||||||||||||    
T  32663800 gttttagggtctgtttggattggcttatttgagcttatctac 32663759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 643
Target Start/End: Original strand, 33046725 - 33046762
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgt 643  Q
    ||||||||||| || |||||||||||||||||||||||    
T  33046725 ttggcttattttagtttatctactggcataagttttgt 33046762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 683
Target Start/End: Original strand, 34235024 - 34235097
Alignment:
Q  610 cttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| |||||||||||||  ||||||||||| | ||  ||||| ||||| || |||| ||||||||||||||    
T  34235024 cttattcgagcttatctactaacataagttttgcgtgaccgtttgagagaacttatgaatacagcttatgacat 34235097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 36631116 - 36631205
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| | |||||||||||| |||||| |||| | ||| | ||| |||||||||| |  || ||||||||||  |||||||||||    
T  36631116 cttatagcatgtacaaaaacaatttaactttactttatcctttactatagaaatagcttaagcgagtttatacataattgcttatcatga 36631205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 682
Target Start/End: Complemental strand, 37689369 - 37689296
Alignment:
Q  609 gcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||||||| |||||  ||| ||| ||||| | ||| |||||||| ||  |||||||||||||||||    
T  37689369 gcttatttgagcttatttactgaaataggttctgtgatactgtatgggagaacttaagaaaacagcttatgaca 37689296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 670
Target Start/End: Complemental strand, 41057298 - 41057233
Alignment:
Q  606 ttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaa 670  Q
    |||||||||||||||||||||||  |||||||   |||||||| |||||||||||| || ||||||    
T  41057298 ttggcttatttgagcttatctacatgcataagcacttgtgagactgtttgggagaatttgtgaaaa 41057233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 773
Target Start/End: Complemental strand, 43046712 - 43046675
Alignment:
Q  736 atagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  43046712 atagcttatgtaagtttatacataagcccttatcatga 43046675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 597 - 642
Target Start/End: Complemental strand, 43062825 - 43062780
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttg 642  Q
    |||||||| ||||||||||||||| |||| |||||| |||||||||    
T  43062825 ctgtttggattggcttatttgagcatatcaactggcttaagttttg 43062780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 683
Target Start/End: Complemental strand, 46031133 - 46031056
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||| ||||||| ||  ||||||||| ||||| |||||  ||||| ||  ||||||||| ||||||||    
T  46031133 ttggcttatttgagtttatctattgttataagttttatgagactgtttcagagaacttacgaaaacagcctatgacat 46031056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 591 - 659
Target Start/End: Complemental strand, 51130908 - 51130839
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataagt-tttgtgagattgtttgggaga 659  Q
    |||||||| ||||| ||| |||||||||||| |||| |||||||||||  ||| || |||||||||||||    
T  51130908 taggacctatttggattgacttatttgagctcatctgctggcataagtagttgcgaaattgtttgggaga 51130839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 622 - 682
Target Start/End: Original strand, 53789406 - 53789464
Alignment:
Q  622 tatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||||||||||||||||   |||| ||||| ||||| |||||||||||||||    
T  53789406 tatctactgacataagttttgtgaga--ctttgagagaacttttggaaacagcttatgaca 53789464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 3e-19; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 593 - 682
Target Start/End: Complemental strand, 34430870 - 34430782
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||||||| |||||||||||||||||||| ||||  ||||||||||| ||||||||||||| || || |||||||| |||||||||    
T  34430870 ggacctgtttggattggcttatttgagcttatcaactga-ataagttttgtaagattgtttgggataatttatgaaaacaacttatgaca 34430782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 589 - 683
Target Start/End: Complemental strand, 848148 - 848055
Alignment:
Q  589 tttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| ||||||||| ||| |||||||||||||||||| | ||||||||||||||||| ||||||| |||| || | ||||| |||||||||||    
T  848148 tttagggcctgtttggattgccttatttgagcttatcta-tagcataagttttgtgagactgtttggaagaacttataaaaactgcttatgacat 848055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 684 - 773
Target Start/End: Original strand, 6909937 - 6910027
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttcc-ataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||||| |||||||||||| ||||||||||    |||||| ||| |||||||||||||||| |||||||||||| ||||||||||    
T  6909937 cttatagcatatacaaaaacaatttaactttatttttttcttttcctatagaaatagcttatgtaagtttatacataagcacttatcatga 6910027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 596 - 682
Target Start/End: Complemental strand, 30926672 - 30926586
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||||||||||||||||||| | ||||||||| |||  ||||| ||||||| |||| || ||||||||||||||||||    
T  30926672 cctgtttggtttggcttatttgagcttattttctggcataaatttgatgagactgtttggaagaacttatgaaaacagcttatgaca 30926586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 593 - 683
Target Start/End: Original strand, 34910323 - 34910413
Alignment:
Q  593 ggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||||  ||||||||||||| ||||||||||  || ||||||| |||||||||||| ||||  | |||||||||||||||||||    
T  34910323 ggacctgtttggactggcttatttgagtttatctactgatatcagttttgggagattgtttggaagaaactatgaaaacagcttatgacat 34910413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 682
Target Start/End: Complemental strand, 4163304 - 4163220
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  |||| |||| | |||||  | |||||||| |||||||||    
T  4163304 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgaca 4163220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 598 - 682
Target Start/End: Complemental strand, 4224925 - 4224841
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  |||| |||| | |||||  | |||||||| |||||||||    
T  4224925 tgtttggattggcttatttgagcttatctactggcataagttttacgagactgttcgtgagaacctatgaaaacaacttatgaca 4224841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 615 - 677
Target Start/End: Original strand, 9559358 - 9559420
Alignment:
Q  615 ttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagctta 677  Q
    ||||| ||||||| ||||||||||||||||||| ||||| ||||||||| |||||||||||||    
T  9559358 ttgagattatctattggcataagttttgtgagactgtttaggagaagttatgaaaacagctta 9559420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 684 - 762
Target Start/End: Complemental strand, 24626300 - 24626222
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagc 762  Q
    ||||||| |||| |||||||||||| ||||| ||||| | ||| | ||| |||||||||||||||||||||||||||||    
T  24626300 cttatagaatatacaaaaacaatttaactttgttttatcctttcctatagaaatagcttatgtaagcttatacataagc 24626222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 680 - 773
Target Start/End: Complemental strand, 8147711 - 8147619
Alignment:
Q  680 acatcttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||| ||| |||| |||||||||||  ||||||||||| | ||| | ||||||||||||||||| ||||||| | ||||||||||||||||    
T  8147711 acatcttttagaatatacaaaaacaattcaactttattttatcttttgctataaaaatagcttatgt-agcttatgcttaagcgcttatcatga 8147619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 589 - 681
Target Start/End: Complemental strand, 24626450 - 24626355
Alignment:
Q  589 tttaggacctgtttgggttggcttatt---tgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    |||||||||||||||| |||| |||||   |||||||||||| |  ||| || ||||||||| ||||||||| || ||||||||||||||||||||    
T  24626450 tttaggacctgtttggattggattattaattgagcttatctagtaacatcagctttgtgagaatgtttgggaaaacttttgaaaacagcttatgac 24626355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 591 - 679
Target Start/End: Complemental strand, 6538672 - 6538584
Alignment:
Q  591 taggacctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatg 679  Q
    |||| ||||||||| ||| |||||||||| |||| || |||||||||||| |||||| |||| ||||||| |  |||||||||||||||    
T  6538672 tagggcctgtttggattgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttatg 6538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 618 - 682
Target Start/End: Complemental strand, 30536634 - 30536570
Alignment:
Q  618 agcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||||||||| |||||||||||||| |||||||||| | || |||||| |||||||||||    
T  30536634 agcttatctactggcgtaagttttgtgagactgtttgggaggacttatgaaaatagcttatgaca 30536570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 596 - 683
Target Start/End: Complemental strand, 103583 - 103496
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||| ||| ||||||||||||||| || | |||||||||||||| ||||||| | ||||| ||   |||||||||||||||||    
T  103583 cctgtttggattgacttatttgagcttatatattagcataagttttgtgtgattgttcgagagaacttacaaaaacagcttatgacat 103496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 598 - 681
Target Start/End: Original strand, 10645304 - 10645387
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgac 681  Q
    ||||||| |||||| ||||||| ||||||| || |||||||||||| ||| |||||||||||| || |||||||| ||| ||||    
T  10645304 tgtttggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaacaacttttgac 10645387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 597 - 683
Target Start/End: Complemental strand, 31624412 - 31624323
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataa---gttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| ||||||||||||||||||| ||||| |||||   |||||| |||| ||||||| |||| || ||||||||||| |||||||    
T  31624412 ctgtttggattggcttatttgagcttatatactgacataagctgttttgagagactgtttggtagaatttatgaaaacagctcatgacat 31624323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 699 - 773
Target Start/End: Original strand, 35070710 - 35070785
Alignment:
Q  699 aaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttata-cataagcgcttatcatga 773  Q
    |||||||||| | ||||||||| | ||||| |||||||||||||||||||||||||| ||| || |||||||||||    
T  35070710 aaaacaattttattttattttatctttttctataaaaatagcttatgtaagcttatagcattagtgcttatcatga 35070785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 597 - 683
Target Start/End: Complemental strand, 24982857 - 24982771
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| ||| || ||| || ||||||||||  |||||||||||||||| ||||| ||||||  ||||| |||||||||||||||    
T  24982857 ctgtttggattgactaattagatcttatctactaacataagttttgtgagactgttttggagaacatttgagaacagcttatgacat 24982771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 33089657 - 33089571
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagt-tttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||||||| ||||||||||||||||||||| |||| || ||||||||| | |||  ||||| || ||||||||||||| |||||    
T  33089657 tgtttgggttgacttatttgagcttatctactgacatatgtatttgtgagactatttcagagaacttatgaaaacagcttaggacat 33089571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 606 - 671
Target Start/End: Complemental strand, 2455131 - 2455066
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaac 671  Q
    |||| |||||||| ||||||||||  |||||||||||||||| |||||||||||| || |||||||    
T  2455131 ttggtttatttgaacttatctactaacataagttttgtgagactgtttgggagaacttctgaaaac 2455066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 692 - 773
Target Start/End: Complemental strand, 30536475 - 30536394
Alignment:
Q  692 atatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||| |||||||||||| || |||||||| ||||| | |||| ||||||||||| || |||||||||||||  |||||||||    
T  30536475 atatacaaaaacaatttaacattattttatcatttgctataataatagcttatgcaaacttatacataagcttttatcatga 30536394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 597 - 682
Target Start/End: Complemental strand, 31623702 - 31623617
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    |||||||  ||| |||||||||  |||||||||||| |||||||| |||| | ||||||||||| || |||||| |||||||||||    
T  31623702 ctgtttgaattgacttatttgaatttatctactggcctaagttttttgaggtggtttgggagaacttctgaaaatagcttatgaca 31623617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 644
Target Start/End: Original strand, 835171 - 835226
Alignment:
Q  588 ttttaggacctgtttgggttggcttatttgagcttatctactggcataagttttgtg 644  Q
    ||||||||| ||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  835171 ttttaggac-tgtttggattgccttatttgagcttatctactagcataagttttgtg 835226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 596 - 652
Target Start/End: Original strand, 35069529 - 35069585
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtt 652  Q
    ||||||||  ||||||||||||||||||||||||| |||||||||||| ||| ||||    
T  35069529 cctgtttgtattggcttatttgagcttatctactgacataagttttgtaagactgtt 35069585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 597 - 656
Target Start/End: Original strand, 21405072 - 21405131
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttggg 656  Q
    |||||||| ||| ||||||||||||||| ||||| |||||||||||||||| | ||||||    
T  21405072 ctgtttggattgacttatttgagcttatatactgacataagttttgtgagaatatttggg 21405131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 596 - 647
Target Start/End: Original strand, 35070571 - 35070622
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgaga 647  Q
    ||||||||| |||||||||||||||||| ||||||||| |||| ||||||||    
T  35070571 cctgtttggattggcttatttgagcttacctactggcacaagtcttgtgaga 35070622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 683
Target Start/End: Original strand, 34404644 - 34404730
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||| ||  |||||||||| ||||| |||| ||||||||||||| || | |||||||||| || |||||| | ||||||||||    
T  34404644 ctgtttggatttacttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatgaaaatatcttatgacat 34404730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 621 - 682
Target Start/End: Original strand, 19411491 - 19411552
Alignment:
Q  621 ttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgaca 682  Q
    ||||||||| ||||||||||| |  || |||||||||||| ||||| |||||||||||||||    
T  19411491 ttatctacttgcataagttttatatgaatgtttgggagaacttttgtaaacagcttatgaca 19411552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 619 - 680
Target Start/End: Complemental strand, 31813291 - 31813230
Alignment:
Q  619 gcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    |||||| |||||||||||||||||||||| | |||||||||| || ||||||  ||||||||    
T  31813291 gcttatttactggcataagttttgtgagactatttgggagaacttatgaaaattgcttatga 31813230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 600 - 683
Target Start/End: Complemental strand, 13907732 - 13907651
Alignment:
Q  600 tttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||| || ||||||||||| ||||||| ||||||||||||  |||||  ||||| ||||| || |||||||||||| ||||||    
T  13907732 tttggattcgcttatttgagtttatctagtggcataagttt--tgagacggtttgagagaatttatgaaaacagcttctgacat 13907651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 733 - 773
Target Start/End: Original strand, 29754193 - 29754233
Alignment:
Q  733 aaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  29754193 aaaatagcttatgcaagctaatacataagcgcttatcatga 29754233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 698 - 762
Target Start/End: Original strand, 30536637 - 30536701
Alignment:
Q  698 aaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagc 762  Q
    ||||||||||| || |||| ||| | ||| | |||||||||||||||| ||||||||||||||||    
T  30536637 aaaaacaatttaacgttatcttatcttttgctataaaaatagcttatgcaagcttatacataagc 30536701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 698 - 773
Target Start/End: Complemental strand, 18076187 - 18076112
Alignment:
Q  698 aaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||| || |||||||  | ||| | ||||||||| |||||| ||||||||||||||| |||||| ||||    
T  18076187 aaaaacaatttaaccttattttctcttttgctataaaaataacttatgcaagcttatacataagtgcttattatga 18076112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 736 - 771
Target Start/End: Original strand, 26550320 - 26550355
Alignment:
Q  736 atagcttatgtaagcttatacataagcgcttatcat 771  Q
    |||||||||||||||||||||||||| |||||||||    
T  26550320 atagcttatgtaagcttatacataagtgcttatcat 26550355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 680
Target Start/End: Original strand, 26559170 - 26559241
Alignment:
Q  610 cttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatga 680  Q
    |||||||||| ||| |||||||||||||  ||||||||| ||||||| |||| || |||||||| |||||||    
T  26559170 cttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatga 26559241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 746
Target Start/End: Complemental strand, 4163180 - 4163118
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgt 746  Q
    |||||| ||||| || ||||||||| ||||||||||| |  |||| |||||||||||||||||    
T  4163180 cttataacatatacacaaacaatttaactttattttatctatttctataaaaatagcttatgt 4163118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 746
Target Start/End: Complemental strand, 4224801 - 4224739
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgt 746  Q
    |||||| ||||| || ||||||||| ||||||||||| |  |||| |||||||||||||||||    
T  4224801 cttataacatatacacaaacaatttaactttattttatctatttctataaaaatagcttatgt 4224739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 597 - 635
Target Start/End: Original strand, 9202903 - 9202941
Alignment:
Q  597 ctgtttgggttggcttatttgagcttatctactggcata 635  Q
    |||||||| ||| ||||||||||||||||||||||||||    
T  9202903 ctgtttggattgacttatttgagcttatctactggcata 9202941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 625 - 683
Target Start/End: Original strand, 20368127 - 20368185
Alignment:
Q  625 ctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||| |||||||||||| ||| | |||||||||| || |||||||| ||||||||||    
T  20368127 ctactgacataagttttgtaagactatttgggagaacttatgaaaacaacttatgacat 20368185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 683
Target Start/End: Original strand, 20861617 - 20861703
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagt-tttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||| |||||||||||||| |||||||||||||| | || |||| | |||||||||  || |||||||| ||||| ||||    
T  20861617 tgtttggattgtcttatttgagcttacctactggcataagtatatgcgagactttttgggagagcttatgaaaacatcttattacat 20861703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 684 - 762
Target Start/End: Complemental strand, 31623565 - 31623487
Alignment:
Q  684 cttatagcatatgcaaaaacaatttcactttattttaccattttccataaaaatagcttatgtaagcttatacataagc 762  Q
    |||||||||||  ||| | |||||| || | |||||| | ||||| |||||||||||| |||||||||||| |||||||    
T  31623565 cttatagcatacacaagagcaatttaacgtcattttatctttttctataaaaatagctaatgtaagcttatgcataagc 31623487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 598 - 683
Target Start/End: Original strand, 33080497 - 33080583
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataag-ttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| | ||||||||||||||||| ||||||||||||   ||||||||||||||   |||| || ||||| || ||||||||||    
T  33080497 tgtttggataggcttatttgagcttatttactggcataagcacttgtgagattgtttaatagaatttctgaaaccaacttatgacat 33080583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 657
Target Start/End: Original strand, 6909786 - 6909847
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttggga 657  Q
    ||||||||| || || ||||| || ||||||||| ||||||| ||||||| |||||||||||    
T  6909786 cctgtttggattagcctatttaagtttatctactagcataagatttgtgacattgtttggga 6909847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 637
Target Start/End: Original strand, 27924516 - 27924561
Alignment:
Q  592 aggacctgtttgggttggcttatttgagcttatctactggcataag 637  Q
    ||||||||||||| || ||| ||||||||||| |||||||||||||    
T  27924516 aggacctgtttggattagctcatttgagcttacctactggcataag 27924561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 736 - 773
Target Start/End: Complemental strand, 34430669 - 34430632
Alignment:
Q  736 atagcttatgtaagcttatacataagcgcttatcatga 773  Q
    |||||||||| |||||||||||||||||| ||||||||    
T  34430669 atagcttatggaagcttatacataagcgcctatcatga 34430632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 598 - 683
Target Start/End: Complemental strand, 35099187 - 35099102
Alignment:
Q  598 tgtttgggttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    ||||||| ||| ||||||||||| |||| |  || ||||||||| ||||  |||||||||||| ||  |||||||||| |||||||    
T  35099187 tgtttggattgacttatttgagcctatccatcggtataagttttctgaggctgtttgggagaatttaggaaaacagctaatgacat 35099102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 611 - 683
Target Start/End: Complemental strand, 24759 - 24687
Alignment:
Q  611 ttatttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||| |||||| ||||||| ||||||||||| |||||||||||| || | |||||||||||||||||    
T  24759 ttatttgagcgtatctattggcatatgttttgtgagactgtttgggagaacttatcaaaacagcttatgacat 24687  T

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Target: scaffold0057; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 660
Target Start/End: Complemental strand, 44176 - 44122
Alignment:
Q  606 ttggcttatttgagcttatctactggcataagttttgtgagattgtttgggagaa 660  Q
    ||||||||||||||| || ||||||||||| ||||||||||| ||||||||||||    
T  44176 ttggcttatttgagcgtacctactggcatatgttttgtgagactgtttgggagaa 44122  T

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Target: scaffold0528 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 615 - 683
Target Start/End: Original strand, 918 - 986
Alignment:
Q  615 ttgagcttatctactggcataagttttgtgagattgtttgggagaagttttgaaaacagcttatgacat 683  Q
    |||||||||||||| |||||||||||||||| | ||||| ||| || || | |||| ||||||||||||    
T  918 ttgagcttatctaccggcataagttttgtgatactgttttggacaacttataaaaatagcttatgacat 986  T

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Target: scaffold0012 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 733 - 773
Target Start/End: Original strand, 207695 - 207735
Alignment:
Q  733 aaaatagcttatgtaagcttatacataagcgcttatcatga 773  Q
    ||||||||||||| ||||||||||||||| |||||||||||    
T  207695 aaaatagcttatgcaagcttatacataagtgcttatcatga 207735  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 596 - 646
Target Start/End: Complemental strand, 22384 - 22334
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctactggcataagttttgtgag 646  Q
    |||||| || || |||||||| |||||||||| ||||||||||||||||||    
T  22384 cctgttaggatttgcttattttagcttatctaatggcataagttttgtgag 22334  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 596 - 629
Target Start/End: Original strand, 159890 - 159923
Alignment:
Q  596 cctgtttgggttggcttatttgagcttatctact 629  Q
    ||||||||| ||||||||||||||||||||||||    
T  159890 cctgtttggattggcttatttgagcttatctact 159923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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