View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10021_low_13 (Length: 363)
Name: NF10021_low_13
Description: NF10021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10021_low_13 |
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Alignment Details
Target: chr5 (Bit Score: 318; Significance: 1e-179; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 16 - 341
Target Start/End: Complemental strand, 34388303 - 34387978
Alignment:
| Q |
16 |
ttggtgttataggtgcaacaaatttgttagggtatggaggctagggatgccaatatgtcccgattgtgacagcggctttctggaagatgtcgaacaatca |
115 |
Q |
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| T |
34388303 |
ttggtgttataggtgcaacaaatttgttagggtatggaggctagggatgccaatatgtcccgattgtgacagcggctttctggaagatgtcgaacaatca |
34388204 |
T |
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| Q |
116 |
acacattccgccaatactgttggtggccgtcgaatgaggttccctatggcggcggctatgtacatgataggccatcgcaataacaattataatcaaaata |
215 |
Q |
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| T |
34388203 |
acacattccgccaatactgttggtggccgtcgaatgaggttccctatggcggcggctatgtacatgataggccatcgcaataataattataatcaaaata |
34388104 |
T |
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| Q |
216 |
cttttcgacgccgccgtagaaacaatgttaacggtggagacatttctccgtttaacccgattatcatgattcgtggtggtggtggttcctctgaggggac |
315 |
Q |
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| T |
34388103 |
cttttcgacgccaccgtagaaacaatgttaacggtggagacatttctccgtttaacccgattatcatgattcgtggtggtggtggttcctctgaggggac |
34388004 |
T |
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| Q |
316 |
gagccgtgagcgtgaagagaataacg |
341 |
Q |
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| T |
34388003 |
gagccgtgagcgtgaagagaataacg |
34387978 |
T |
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