View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10021_low_15 (Length: 305)
Name: NF10021_low_15
Description: NF10021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10021_low_15 |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 37854811 - 37854542
Alignment:
| Q |
1 |
tttttcgttcaatggtgcacatttgttgaggactttcatttcaatcgcctttgagtttaatggtcaagttatttttagtactgtttctttgtgtttttct |
100 |
Q |
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| T |
37854811 |
tttttcgttcaatggtgcacatttgttgaggactttcatttcaatcgcctctgagtttaatggtcaagttatttttagtactgtttctttgtgtttttct |
37854712 |
T |
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| Q |
101 |
ttaattattataaggaacattttactgtttaagaatgaatttttgtgcattttaaactagacagcgcatatcagatttgatttataactaattgagttta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37854711 |
ttaattattataaggaacattttactgtttaagaatgaatttgtgtgcattttaaactagacagcgcatatcagatttgatttataactaattgagttta |
37854612 |
T |
|
| Q |
201 |
ggcaaatcaaattctccttctttcttatacttattcattcctttgctaattaagtattggcagctgttac |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37854611 |
ggcaaatcaaattctccttctttcttatacttattcattcctttgctaattaagtattggcagctgttac |
37854542 |
T |
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