View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10021_low_2 (Length: 618)

Name: NF10021_low_2
Description: NF10021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10021_low_2
NF10021_low_2
[»] chr4 (5 HSPs)
chr4 (19-602)||(9504258-9504819)
chr4 (346-413)||(8472537-8472604)
chr4 (316-404)||(11271723-11271811)
chr4 (335-403)||(28232807-28232874)
chr4 (458-489)||(51087577-51087608)
[»] chr7 (1 HSPs)
chr7 (316-416)||(32156346-32156447)
[»] chr1 (3 HSPs)
chr1 (375-423)||(39551353-39551401)
chr1 (362-395)||(27728190-27728223)
chr1 (332-376)||(47443520-47443564)
[»] chr6 (6 HSPs)
chr6 (366-423)||(6449331-6449388)
chr6 (362-423)||(31694975-31695036)
chr6 (452-489)||(8424722-8424759)
chr6 (320-403)||(5548833-5548916)
chr6 (355-403)||(5561646-5561694)
chr6 (362-394)||(9075402-9075434)
[»] chr3 (5 HSPs)
chr3 (320-400)||(39553815-39553896)
chr3 (332-403)||(34569991-34570062)
chr3 (335-405)||(23186866-23186936)
chr3 (355-397)||(38692793-38692835)
chr3 (452-488)||(5404869-5404905)
[»] chr5 (3 HSPs)
chr5 (316-423)||(16895317-16895424)
chr5 (332-376)||(11072975-11073019)
chr5 (346-382)||(42160036-42160072)
[»] chr8 (7 HSPs)
chr8 (316-386)||(14458131-14458202)
chr8 (366-423)||(30624017-30624074)
chr8 (363-403)||(5413950-5413990)
chr8 (335-423)||(18165102-18165190)
chr8 (363-411)||(26263055-26263103)
chr8 (366-410)||(27160965-27161009)
chr8 (335-395)||(40705010-40705070)
[»] chr2 (4 HSPs)
chr2 (333-411)||(38192023-38192102)
chr2 (363-403)||(5517946-5517986)
chr2 (363-403)||(6774724-6774764)
chr2 (363-395)||(14408745-14408777)
[»] scaffold0392 (1 HSPs)
scaffold0392 (363-403)||(2052-2092)


Alignment Details
Target: chr4 (Bit Score: 464; Significance: 0; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 19 - 602
Target Start/End: Original strand, 9504258 - 9504819
Alignment:
Q  19 ttcttggtacaaataaatgcaatgtctggcaggtgtttctctgtcccttgaactacatgagctcatttattctttgttcgatctcgattgattgtaattt 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9504258 ttcttggtacaaataaatgcaatgtctggcaggtgtttctctgtcccttgaactacatgagctcatttattctttgttcgatcttgattgattgtaattt 9504357  T
Q  119 aatgattttgtttcctgaagaaaacaaccaaaatgaaatttgttccaacatctaagatctctcgtatttatataatttcaggatttgaagagtggcaggc 218  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9504358 aatgattttgtttcctgatgaaaacaaccaaaatgaaatttgttccaacatctaagatctctcgtatttatataatttcaggatttgaagagtggcagg- 9504456  T
Q  219 tgaaggaaattaaatttctgataagcacctaagcactgccactagtgaaattctcccttaaaagttagcagacaagggcaatgaatcaagccacaagagt 318  Q
                        ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9504457 --------------------ataagcacctaagcactgccactggtgaaattctcccttaaaagttagcagacaagggcaatgagtcaagccacaagagt 9504536  T
Q  319 gtatgtttggatgacggtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaattgtggtggctcactg 418  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  9504537 gtatgtttggatgacggttaatttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaattgcggtggctcactg 9504636  T
Q  419 tgattatgcaaatcccagactacacgaagtactctccatcgagcatcccatactacttgatgtgggacttagaaacccctttaatacccaaattcctata 518  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  9504637 tgattctgccaatcccagactacacgaagtactctccatcgagcatcccatactactcgatgtgggacttagaaacccctttaa-acccaaattcctata 9504735  T
Q  519 atagctacaaccccttactcgacctttttcaagttaacccttctgtaggtagccgtttttgagataccgataatcagctctaat 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  9504736 atagctacaaccccttactcgacctttttcaagttaacccttctgtaggtagccgtttttgagataccaataatcagctctaat 9504819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 346 - 413
Target Start/End: Complemental strand, 8472604 - 8472537
Alignment:
Q  346 aaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaattgtggtggct 413  Q
    ||||||||  ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  8472604 aaaatcatgatggcactgtgattttgttgaagctacaaagtgtagcttttgccaaaattgtggtggct 8472537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 404
Target Start/End: Original strand, 11271723 - 11271811
Alignment:
Q  316 agtgtatgtttggatgacggtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaatt 404  Q
    |||| |||||||||  ||||||||||||  |||||||| ||| ||  ||||||||| | |||||||||||| ||| ||||| |||||||    
T  11271723 agtgcatgtttggaatacggtgagtttgacaaaatcatggtgtcacagtgattttgataaagctccaaagtgtagtttttgtcaaaatt 11271811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 335 - 403
Target Start/End: Complemental strand, 28232874 - 28232807
Alignment:
Q  335 gtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaat 403  Q
    |||||||||  |||||||||||||  |||||||||| | ||||||||||||| ||||||||| ||||||    
T  28232874 gtgagtttgacaaaatcatagtggg-ttgtgattttatggaagctccaaagtgtagcttttggcaaaat 28232807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 458 - 489
Target Start/End: Complemental strand, 51087608 - 51087577
Alignment:
Q  458 cgagcatcccatactacttgatgtgggactta 489  Q
    ||||||||||||||||||||||||||||||||    
T  51087608 cgagcatcccatactacttgatgtgggactta 51087577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 316 - 416
Target Start/End: Original strand, 32156346 - 32156447
Alignment:
Q  316 agtgtatgtttggatgacg-gtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaattgtggtggctc 414  Q
    |||||||||||||||||   ||||||| || ||||||| | |||||||||||||||||||||  |||||| | ||| ||||| |||||||||||| ||||    
T  32156346 agtgtatgtttggatgagtagtgagttaggcaaaatcacattggcattgtgattttgttgaatatccaaaatatagtttttgtcaaaattgtggtagctc 32156445  T
Q  415 ac 416  Q
    ||    
T  32156446 ac 32156447  T

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Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 423
Target Start/End: Complemental strand, 39551401 - 39551353
Alignment:
Q  375 aagctccaaagtctagcttttgccaaaattgtggtggctcactgtgatt 423  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  39551401 aagctccaaagtgtaggttttggcaaaattgtggtggctcactgtgatt 39551353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 395
Target Start/End: Complemental strand, 27728223 - 27728190
Alignment:
Q  362 tgtgattttgttgaagctccaaagtctagctttt 395  Q
    ||||||||||||||||||||||||| ||||||||    
T  27728223 tgtgattttgttgaagctccaaagtgtagctttt 27728190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 47443564 - 47443520
Alignment:
Q  332 acggtgagtttggtaaaatcatagtggcattgtgattttgttgaa 376  Q
    ||||||||||||| | |||||||||| ||| ||||||||||||||    
T  47443564 acggtgagtttggcagaatcatagtgtcatcgtgattttgttgaa 47443520  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000009; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 366 - 423
Target Start/End: Complemental strand, 6449388 - 6449331
Alignment:
Q  366 attttgttgaagctccaaagtctagcttttgccaaaattgtggtggctcactgtgatt 423  Q
    |||||||||||||| |||||| |||||| |||  ||||||||||||||||| ||||||    
T  6449388 attttgttgaagcttcaaagtgtagcttctgcggaaattgtggtggctcacagtgatt 6449331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 362 - 423
Target Start/End: Complemental strand, 31695036 - 31694975
Alignment:
Q  362 tgtgattttgttgaagctccaaagtctagcttttgccaaaattgtggtggctcactgtgatt 423  Q
    |||||||||||| || ||||||||| ||||||||||||||||||  ||| ||||| ||||||    
T  31695036 tgtgattttgtttaatctccaaagtgtagcttttgccaaaattgaagtgactcaccgtgatt 31694975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 452 - 489
Target Start/End: Complemental strand, 8424759 - 8424722
Alignment:
Q  452 ctccatcgagcatcccatactacttgatgtgggactta 489  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  8424759 ctccaccgaacatcccatactacttgatgtgggactta 8424722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 320 - 403
Target Start/End: Complemental strand, 5548916 - 5548833
Alignment:
Q  320 tatgtttggat-gacggtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaat 403  Q
    ||||||||||| || ||||||||  | |||||||||||| || ||||||||||  ||||||| ||||| ||||||| ||||||||    
T  5548916 tatgtttggattgagggtgagttctgcaaaatcatagtgacaatgtgattttg-ggaagctcaaaagtgtagctttagccaaaat 5548833  T

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Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 355 - 403
Target Start/End: Original strand, 5561646 - 5561694
Alignment:
Q  355 gtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaat 403  Q
    |||||| ||||||||||||  ||||||||||| ||| ||||||||||||    
T  5561646 gtggcaatgtgattttgttacagctccaaagtatagtttttgccaaaat 5561694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 362 - 394
Target Start/End: Original strand, 9075402 - 9075434
Alignment:
Q  362 tgtgattttgttgaagctccaaagtctagcttt 394  Q
    ||||||||||||||||||||||||| |||||||    
T  9075402 tgtgattttgttgaagctccaaagtgtagcttt 9075434  T

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Target: chr3 (Bit Score: 34; Significance: 0.0000000009; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 320 - 400
Target Start/End: Complemental strand, 39553896 - 39553815
Alignment:
Q  320 tatgtttggat-gacggtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaa 400  Q
    ||||||||||| ||| ||||||||||||||||||  ||| || |||||||||||||||  |||||| |  ||||||||||||    
T  39553896 tatgtttggattgacagtgagtttggtaaaatcacggtgacactgtgattttgttgaaaatccaaaatgcagcttttgccaa 39553815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 403
Target Start/End: Complemental strand, 34570062 - 34569991
Alignment:
Q  332 acggtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaat 403  Q
    |||| ||||||| |||||||| |||||||||||||||||||| ||  | ||||||  |||||||| ||||||    
T  34570062 acggcgagtttgataaaatcacagtggcattgtgattttgttaaattttcaaagtgcagcttttgtcaaaat 34569991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 335 - 405
Target Start/End: Original strand, 23186866 - 23186936
Alignment:
Q  335 gtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaattg 405  Q
    ||||||| || ||||||| | |||||  |||||||||||||||||| ||||| || |||||| ||||||||    
T  23186866 gtgagttaggcaaaatcacactggcaccgtgattttgttgaagctctaaagtgtaacttttggcaaaattg 23186936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 355 - 397
Target Start/End: Complemental strand, 38692835 - 38692793
Alignment:
Q  355 gtggcattgtgattttgttgaagctccaaagtctagcttttgc 397  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||    
T  38692835 gtggcactgtgattttgttgaagctccaaagtgtagtttttgc 38692793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 452 - 488
Target Start/End: Complemental strand, 5404905 - 5404869
Alignment:
Q  452 ctccatcgagcatcccatactacttgatgtgggactt 488  Q
    |||||||||||||||||| |||||||||| |||||||    
T  5404905 ctccatcgagcatcccattctacttgatgcgggactt 5404869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000004; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 316 - 423
Target Start/End: Original strand, 16895317 - 16895424
Alignment:
Q  316 agtgtatgtttggat-gacggtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaattgtggtggctc 414  Q
    ||||||||||||||| ||  |||| ||||| |||| ||  |||||| ||||||| ||| ||||||||||||| ||| |||||| | |||  |||||||||    
T  16895317 agtgtatgtttggattgatagtgaatttggcaaaaccactgtggcactgtgattctgt-gaagctccaaagtgtagattttgcaataatcatggtggctc 16895415  T
Q  415 actgtgatt 423  Q
    |||||||||    
T  16895416 actgtgatt 16895424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 332 - 376
Target Start/End: Complemental strand, 11073019 - 11072975
Alignment:
Q  332 acggtgagtttggtaaaatcatagtggcattgtgattttgttgaa 376  Q
    |||||||||||||||| ||||| ||||||  ||||||||||||||    
T  11073019 acggtgagtttggtaagatcatggtggcaacgtgattttgttgaa 11072975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 346 - 382
Target Start/End: Original strand, 42160036 - 42160072
Alignment:
Q  346 aaaatcatagtggcattgtgattttgttgaagctcca 382  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  42160036 aaaatcatagtggcactgtgattttgtggaagctcca 42160072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 14458131 - 14458202
Alignment:
Q  316 agtgtatgtttggatgacg-gtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagt 386  Q
    |||||||||||||||||   ||||||||||  ||||| |||||||||||||||||| || ||||| ||||||    
T  14458131 agtgtatgtttggatgagttgtgagtttggcgaaatcttagtggcattgtgattttcttaaagctacaaagt 14458202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 423
Target Start/End: Original strand, 30624017 - 30624074
Alignment:
Q  366 attttgttgaagctccaaagtctagcttttgccaaaattgtggtggctcactgtgatt 423  Q
    ||||||||||||||| |||||  | ||||||||||||| ||||||| ||| |||||||    
T  30624017 attttgttgaagctcgaaagtgcaacttttgccaaaatcgtggtggttcaatgtgatt 30624074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 403
Target Start/End: Original strand, 5413950 - 5413990
Alignment:
Q  363 gtgattttgttgaagctccaaagtctagcttttgccaaaat 403  Q
    |||| ||||||||||||||||||| ||||||||| ||||||    
T  5413950 gtgagtttgttgaagctccaaagtgtagcttttgtcaaaat 5413990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 423
Target Start/End: Original strand, 18165102 - 18165190
Alignment:
Q  335 gtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaattgtggtggctcactgtgatt 423  Q
    |||||||||| ||||| |  ||| |||||||||||||||||| |  |||| | ||||||||| |||||| | ||| |||||| ||||||    
T  18165102 gtgagtttggcaaaattacggtgccattgtgattttgttgaaccatcaaattttagcttttgtcaaaatcgaggtagctcaccgtgatt 18165190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 411
Target Start/End: Original strand, 26263055 - 26263103
Alignment:
Q  363 gtgattttgttgaagctccaaagtctagcttttgccaaaattgtggtgg 411  Q
    ||||||||||||||| | |||||| ||| |||||| |||||||||||||    
T  26263055 gtgattttgttgaagtttcaaagtatagtttttgcaaaaattgtggtgg 26263103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 27160965 - 27161009
Alignment:
Q  366 attttgttgaagctccaaagtctagcttttgccaaaattgtggtg 410  Q
    |||||||||||||| |||||| || ||||||||||||| ||||||    
T  27160965 attttgttgaagcttcaaagtataacttttgccaaaatcgtggtg 27161009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 335 - 395
Target Start/End: Original strand, 40705010 - 40705070
Alignment:
Q  335 gtgagtttggtaaaatcatagtggcattgtgattttgttgaagctccaaagtctagctttt 395  Q
    ||||||||||  ||||||  |||| | |||||||||||||||||||||| || ||||||||    
T  40705010 gtgagtttggcgaaatcactgtgggactgtgattttgttgaagctccaacgtgtagctttt 40705070  T

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Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 333 - 411
Target Start/End: Complemental strand, 38192102 - 38192023
Alignment:
Q  333 cggtgagtttgg-taaaatcatagtggcattgtgattttgttgaagctccaaagtctagcttttgccaaaattgtggtgg 411  Q
    |||||||||||| |||||| | |||| |||||||||||||||||||||   |||| ||| |||||||| ||| |||||||    
T  38192102 cggtgagtttgggtaaaattacagtgacattgtgattttgttgaagctttgaagtgtagtttttgccagaatcgtggtgg 38192023  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 403
Target Start/End: Complemental strand, 5517986 - 5517946
Alignment:
Q  363 gtgattttgttgaagctccaaagtctagcttttgccaaaat 403  Q
    ||||| ||||| |||||||||||| ||||||||||||||||    
T  5517986 gtgatgttgttcaagctccaaagtgtagcttttgccaaaat 5517946  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 403
Target Start/End: Original strand, 6774724 - 6774764
Alignment:
Q  363 gtgattttgttgaagctccaaagtctagcttttgccaaaat 403  Q
    ||||||||||||||||||| |||| |||||||||| |||||    
T  6774724 gtgattttgttgaagctccgaagtgtagcttttgctaaaat 6774764  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 395
Target Start/End: Complemental strand, 14408777 - 14408745
Alignment:
Q  363 gtgattttgttgaagctccaaagtctagctttt 395  Q
    |||||||||||||||||||||||| ||||||||    
T  14408777 gtgattttgttgaagctccaaagtgtagctttt 14408745  T

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Target: scaffold0392 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0392
Description:

Target: scaffold0392; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 363 - 403
Target Start/End: Original strand, 2052 - 2092
Alignment:
Q  363 gtgattttgttgaagctccaaagtctagcttttgccaaaat 403  Q
    ||||||||||||||||| |||||| |||||||||| |||||    
T  2052 gtgattttgttgaagctacaaagtgtagcttttgcgaaaat 2092  T

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