View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10021_low_21 (Length: 238)
Name: NF10021_low_21
Description: NF10021
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10021_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 31364550 - 31364339
Alignment:
| Q |
1 |
aacaaattatttgtaaatgtgacgtcataatactgtattcctcaaatattggctgagtcaaaggacatacatatttatataccaaagtcgaaaggacatg |
100 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31364550 |
aacaaattatatgtaaatgtgacgtcataatactgtattcctcaaatattggctgagtcaaaggacatacatatttatataccaaagtcgaaaggacatg |
31364451 |
T |
|
| Q |
101 |
aattcatatggtagta-taagcacaactaattctggtcgctggccaatatgctttctagaaacatgaaagtgctcatacctgaattgcgtaggacatagc |
199 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
31364450 |
aattcatatggtagtactaagcacaactaattctggtcgctgcccaatatgctttctagaaacatgaaagtgttcatacctgaattgcgtaggacatagc |
31364351 |
T |
|
| Q |
200 |
catgcatgcaat |
211 |
Q |
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|||||||||||| |
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| T |
31364350 |
catgcatgcaat |
31364339 |
T |
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