View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10022_low_2 (Length: 481)
Name: NF10022_low_2
Description: NF10022
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10022_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 447; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 447; E-Value: 0
Query Start/End: Original strand, 1 - 463
Target Start/End: Original strand, 32281573 - 32282035
Alignment:
| Q |
1 |
aatgatacttgcaggaatggaagaagaggccttcagaactgctgagggtatatttctagcaggctggtcagaagaaggatccgggtaacttcttacatcc |
100 |
Q |
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| T |
32281573 |
aatgatacttgcaggaatggaagaagaggccttcacaactgctgagggtatatttctagcaggctggtcagaagaaggatccgggtaacttcttacatcc |
32281672 |
T |
|
| Q |
101 |
cctgccatcagtgattgtttgtgtttcacctgcatttttctttctttcttgtgcatgtgtaggagggactagggaggatttctagatgtcttcaaaaaac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32281673 |
cctgccatcagtgattgtttgtgtttcacctgcatttttctttctttcttgtgcatgtgtaggagggactagggaggatttctagatgtcttcaaaaaac |
32281772 |
T |
|
| Q |
201 |
tactcctacactaatgattatttgtcaatattacaaattatgctattagattagtgtgcctcatgcatattatgcttgtgcccatctgtttctcaaagtc |
300 |
Q |
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||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32281773 |
tactcctacactaatgattatatgtcaatattacaaaatatgctattagattagtgtgcctcatgcatattatgcttgtgcccatctgtttctcaaagtc |
32281872 |
T |
|
| Q |
301 |
aaagctagcatttttctcacccaataaatttcaattatttggttgtaaatttattatagaacactgatgatttttattcaaatgattggattgatgaaaa |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32281873 |
aaagctagcatttttctcacccaataaatttcaattatttggttgcaaatttattatagaacactgatgatttttattcaaatgattggattgatgaaaa |
32281972 |
T |
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| Q |
401 |
tcacattctgcgagttcttactgctgtaattttcaagtctttacattttatgcagttattcct |
463 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32281973 |
tcacattctgcgagttcttactgctgtaattttcaagtctttacattttatgcagttattcct |
32282035 |
T |
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