View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10025_low_8 (Length: 286)
Name: NF10025_low_8
Description: NF10025
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10025_low_8 |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 24 - 277
Target Start/End: Complemental strand, 40508817 - 40508564
Alignment:
| Q |
24 |
ggagggttactcgtgccaccactaggttgaggagcagaaccatttggtgataactgtggagatatctttggtacttgatgttgtggaggtgatgctgatg |
123 |
Q |
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| T |
40508817 |
ggagggttactcgtgccaccactaggttgaggagcagaaccatttggtgataactgtggagatatctttggtacttgatgttgtggaggtgatgctgatg |
40508718 |
T |
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| Q |
124 |
gtgttggtggattttttgggggaatttgatggatattaataataactttttggcctaaagtacaataatttgagacactacatataaagtagtagacacc |
223 |
Q |
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| T |
40508717 |
gtgttggtggattttgtgggggaatttgatggacattaataataactttttggcctaaagtacaataatttgagacactacatatgaagtagtagatacc |
40508618 |
T |
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| Q |
224 |
tctttcctttaatgggaaatttactgggctactgttgaataccttcacaggttc |
277 |
Q |
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| T |
40508617 |
tctttcctttaatgggaaatttactgggctactgttgaataccttcagaggttc |
40508564 |
T |
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