View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10026_low_9 (Length: 305)
Name: NF10026_low_9
Description: NF10026
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10026_low_9 |
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Alignment Details
Target: chr1 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 16 - 193
Target Start/End: Complemental strand, 28495611 - 28495431
Alignment:
| Q |
16 |
caaaggccaagtttatcactttggttaaaccaagggaatcatgaaatgggacaaagttctaattccctttatggttcttctggtttatctgagatagttc |
115 |
Q |
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| T |
28495611 |
caaaggccaagtttatcactttggttaaaccaagggaatcatgaaatgggacaaagttctaattccctttttggttcttctggtttatctgagatagttc |
28495512 |
T |
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| Q |
116 |
aaatgggaaatgctactactaataataataa---taatgccttgatttgttcttcttcatcatcaatatttggtatacctg |
193 |
Q |
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|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
28495511 |
aaatgggaaatgctgctactaataataataataataatgccttgatttgttcttcttcatcatcaatgtttggtatacctg |
28495431 |
T |
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