View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10028_2 (Length: 653)

Name: NF10028_2
Description: NF10028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10028_2
NF10028_2
[»] chr7 (1 HSPs)
chr7 (4-653)||(45954364-45955013)


Alignment Details
Target: chr7 (Bit Score: 626; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 626; E-Value: 0
Query Start/End: Original strand, 4 - 653
Target Start/End: Complemental strand, 45955013 - 45954364
Alignment:
Q  4 tatactctcgaaataattttggttacagttgaaaagaaaaacatggcagccaaaaggttctttaattgtctcagcatcaagcaccaagaaaatcctcata 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45955013 tatactctcgaaataattttggttacagttgaaaagaaaaacatggcagccaaaaggttctttaattgtctcagcatcaagcaccaagaaaatcctcata 45954914  T
Q  104 atgggaggtactagattcattggtgtgtttttgtcaaggcaacttgtcaaagaaggccaccaggtatatatgattttattattactcattatttgactct 203  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45954913 atgggaggtactagattcattggtgtgtttttgtcaaggcaacttgtcaaagaaggccaccaggtatatatgattttattattactcattatttgactct 45954814  T
Q  204 aaccggaaataatatatttttgaattaaggtttaggaaaataacttgtaaatttggtaggtaactttatttacaagaggaaaagcacctatcactcaaca 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  45954813 aaccggaaataatatatttttgaattaaggtttaggaaaataacttgtaaatttggtaggtaactttattcacaagaggaaaagcacctatcactcaaca 45954714  T
Q  304 attgccaggtgaatcagacactgactttgctgatttttcttccaaggtatgctaattgtaaatgtaaacatcaaagctggatcattcactatttttgtaa 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||    
T  45954713 attgccaggtgaatcagacactgactttgctgatttttcttccaaggtatgttaattgtaaatgtaaacatcaaagctgtttcattcactatttttgtaa 45954614  T
Q  404 tgtaatgtaatttatttttatttcatagatcttgcatttgaaaggagacaggaaagactatgattttgtaaaatctagtctctcagcagaaggatttgat 503  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45954613 tgtaatgtaacttatttttatttcatagatcttgcatttgaaaggagacaggaaagactatgattttgtaaaatctagtctctcagcagaaggatttgat 45954514  T
Q  504 gttgtttatgacattaatggtatttagattcttaactctcacaccttctgtgctgaataccatttcttactattcatattaagaattgtgatttttcatg 603  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45954513 gttgtttatgacattaatggtatttagattcttaactttcacaccttctgtgctgaataccatttcttactattcatattaagaattgtgatttttcatg 45954414  T
Q  604 atatgtatctctcttcaaatttaatgattttatttggcatatgttacagg 653  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45954413 atatgtatctctcttcaaatttaatgattttatttggcatatgttacagg 45954364  T

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