View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10028_7 (Length: 416)
Name: NF10028_7
Description: NF10028
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10028_7 |
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Alignment Details
Target: chr7 (Bit Score: 295; Significance: 1e-165; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 10 - 373
Target Start/End: Original strand, 6709101 - 6709463
Alignment:
| Q |
10 |
aagaatataactaatttaagtgggagggcatgatgacctacggatgtcgaagaatatgtaacatagaaatatagaaagacaaataggtatactataataa |
109 |
Q |
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| T |
6709101 |
aagaatataactaatttaagtgggagggcatgatgacctacc--tgtc-aagaatatgtaacatagaaatatagaaagacaaataggtatactataataa |
6709197 |
T |
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| Q |
110 |
aaggacattgtcattaaattgattataagaggcaattataaagaaataataaataaaatattatatgacnnnnnnnatttggcatgcatgatgatgatgg |
209 |
Q |
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| T |
6709198 |
aaggacattgtcattaaattgattataagaggcaattataaagaaataataaatagaatattatatgactttttttatttggcatgcatgatgatgatgg |
6709297 |
T |
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| Q |
210 |
tgtctcacacacgacccaagaatcgatacactgcgacgtgggcttatattgtaagacattcttgcttaagccatgtgcttcccaccctccttgcatctat |
309 |
Q |
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| T |
6709298 |
tgtctcacacacgacccaagaatcgaaacactgcgacgtgggcttatattgtaagacattcttgcttaagccatgtgcttcccaccctccttgcatctat |
6709397 |
T |
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| Q |
310 |
ttgtacgg--tacctctttgtgttttgtttatgggaagtgatcttgaccttgatcagaagagttgg |
373 |
Q |
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| T |
6709398 |
ttgtacggtatacctctttgtgttatgtttatgggaagtgatcttgaccttaatcagaagagttgg |
6709463 |
T |
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