View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10030_high_5 (Length: 366)
Name: NF10030_high_5
Description: NF10030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10030_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 14 - 351
Target Start/End: Original strand, 19765664 - 19766001
Alignment:
| Q |
14 |
agatgataaggaacaatgggtcgaccctaaagttgtcccggaatgtctgtcatcacatttaaaaagttgtgatctttacacattcttaggccttgaagga |
113 |
Q |
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| T |
19765664 |
agatgataaggaacaatgggtcgaccctaaagttgtcccggaatgtctgtcatcacatttaaaaagttgcgatctttacacattcttaggccttgaagga |
19765763 |
T |
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| Q |
114 |
gagcttcatctagcatgctacatattgaagaatgcaagagttttggaagagatgatgatatggaatgttggacacactgaagtaaaaaggtcaatattct |
213 |
Q |
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| T |
19765764 |
gagcttcatctagcatgctacatattgaagaatgcaagagttttggaagagatgatgatatggaatgttggacacactgaagtaaaaaggtcgatattct |
19765863 |
T |
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| Q |
214 |
catgcctgaaggcctctgcaaaatgccgagttattttgaagcatgtatgttattctatccttaatttgtgctaggttcatttgttgtctcaactattctt |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19765864 |
catgcctgaaggcctctgcaaaatgccgagttattttgaagcatgtatgttattctatccttaatttgtgctaggttcatttgttgtctcaactattctt |
19765963 |
T |
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| Q |
314 |
aatttataacatatttctcctgtttacatgttatacat |
351 |
Q |
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| T |
19765964 |
aatttataacatatttctccagtttacatgttatacat |
19766001 |
T |
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