View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10030_low_7 (Length: 433)
Name: NF10030_low_7
Description: NF10030
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10030_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 415
Target Start/End: Complemental strand, 1266232 - 1265819
Alignment:
| Q |
1 |
gaggaagaaggcgaccaacaatgtcatggcttatagttttcatgtcttgtgaggttgatttggaaacaagggaagccatgtcgaggatgttcccggtgaa |
100 |
Q |
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| T |
1266232 |
gaggaagaaggcgaccgacaatgtcatggcttatagttttcatgtcttgtgaggttgatttggaaacaagggaagccatgtcgaggatgttcccggtgaa |
1266133 |
T |
|
| Q |
101 |
gaagctaggtctcgggccccgaacaccttgcatctccatgattttcttgatgcgtagtggagtgaggaagtaacatgataggttttcatacaagagttta |
200 |
Q |
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| T |
1266132 |
gaagctaggtctcgggccccgaacaccttgcatctccatgattttcttgatgcgcagtggagtgaggaagtaacatgataggttttcatacaagagttta |
1266033 |
T |
|
| Q |
201 |
aatagaaaagtcactagtatgaacaaaagtatattaagaaccaccatcatggagatgannnnnnnnnnngtggtgctaatatatattttgggatgatgag |
300 |
Q |
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| T |
1266032 |
aatagaaaagtcactagtatgaacaaaagtatattaagaaccaccatcatggagatga-ttttttttttgtggtgccaatatatattttgggatgatgag |
1265934 |
T |
|
| Q |
301 |
aagtgaatttgagattataggaagttagagtattgatatgagatgggaatatgatgtgtgactcaacttatatagtgggaatttgatctgtgactattac |
400 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
1265933 |
aagtgaatttgagattataggaagttagagtagtgatatgagatgggaatatgatgtgtgactcaacttatatagtgggaatttgatctgtgactattcc |
1265834 |
T |
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| Q |
401 |
ttcatttttatatac |
415 |
Q |
| |
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| T |
1265833 |
ttcatttttatatac |
1265819 |
T |
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