View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10031_high_6 (Length: 235)

Name: NF10031_high_6
Description: NF10031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10031_high_6
NF10031_high_6
[»] chr1 (4 HSPs)
chr1 (14-167)||(38622243-38622402)
chr1 (159-220)||(38622717-38622778)
chr1 (14-97)||(10136379-10136462)
chr1 (14-62)||(25844810-25844858)
[»] chr5 (11 HSPs)
chr5 (14-97)||(40150249-40150332)
chr5 (15-97)||(10759321-10759402)
chr5 (14-97)||(36424692-36424775)
chr5 (14-102)||(29166927-29167015)
chr5 (14-62)||(37247793-37247841)
chr5 (14-97)||(6154391-6154474)
chr5 (14-97)||(26668332-26668415)
chr5 (14-97)||(26939929-26940012)
chr5 (14-64)||(20180147-20180197)
chr5 (14-64)||(37646047-37646097)
chr5 (14-62)||(39519439-39519487)
[»] chr8 (4 HSPs)
chr8 (14-97)||(1808504-1808587)
chr8 (14-97)||(1909906-1909989)
chr8 (14-97)||(44924880-44924963)
chr8 (14-62)||(40124888-40124936)
[»] chr4 (11 HSPs)
chr4 (14-97)||(13060521-13060604)
chr4 (14-83)||(16422100-16422169)
chr4 (14-97)||(12822869-12822952)
chr4 (14-97)||(5270382-5270465)
chr4 (14-97)||(8694767-8694850)
chr4 (14-97)||(31728325-31728408)
chr4 (14-62)||(19907342-19907390)
chr4 (14-62)||(31274568-31274616)
chr4 (14-62)||(37263557-37263605)
chr4 (14-97)||(5925763-5925846)
chr4 (14-97)||(33467962-33468045)
[»] chr7 (6 HSPs)
chr7 (14-97)||(12802336-12802419)
chr7 (14-97)||(42625538-42625620)
chr7 (14-64)||(3881025-3881075)
chr7 (14-64)||(44508288-44508338)
chr7 (14-62)||(4931277-4931325)
chr7 (14-62)||(10392081-10392129)
[»] scaffold0057 (1 HSPs)
scaffold0057 (14-96)||(36175-36257)
[»] chr6 (8 HSPs)
chr6 (14-94)||(33686606-33686686)
chr6 (14-97)||(11533661-11533744)
chr6 (14-97)||(11559171-11559254)
chr6 (14-97)||(11569652-11569734)
chr6 (14-64)||(22694377-22694427)
chr6 (16-97)||(2699073-2699154)
chr6 (14-64)||(17600431-17600481)
chr6 (14-62)||(6406854-6406902)
[»] chr3 (13 HSPs)
chr3 (14-97)||(20175444-20175527)
chr3 (14-97)||(20521015-20521098)
chr3 (14-97)||(46965066-46965149)
chr3 (14-97)||(757323-757406)
chr3 (14-97)||(7570174-7570257)
chr3 (14-97)||(18468266-18468349)
chr3 (15-64)||(32473136-32473185)
chr3 (14-62)||(23660483-23660531)
chr3 (14-62)||(23665115-23665163)
chr3 (14-97)||(12970767-12970850)
chr3 (14-97)||(18473060-18473143)
chr3 (15-97)||(3426125-3426207)
chr3 (14-64)||(55326831-55326880)
[»] chr2 (14 HSPs)
chr2 (14-97)||(12361299-12361382)
chr2 (14-83)||(25496357-25496426)
chr2 (14-97)||(19891466-19891549)
chr2 (14-64)||(9179718-9179768)
chr2 (15-97)||(18345471-18345553)
chr2 (14-64)||(20101642-20101692)
chr2 (15-97)||(25477248-25477330)
chr2 (14-62)||(1934003-1934051)
chr2 (14-102)||(19897002-19897090)
chr2 (14-102)||(29678732-29678820)
chr2 (14-62)||(30651968-30652016)
chr2 (14-97)||(12797984-12798067)
chr2 (15-97)||(17967923-17968005)
chr2 (14-64)||(28604139-28604189)
[»] scaffold0054 (1 HSPs)
scaffold0054 (14-64)||(30231-30281)
[»] scaffold0352 (1 HSPs)
scaffold0352 (14-97)||(8163-8246)
[»] scaffold0002 (1 HSPs)
scaffold0002 (14-97)||(442899-442982)
[»] scaffold0240 (1 HSPs)
scaffold0240 (14-62)||(5023-5071)


Alignment Details
Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 38622243 - 38622402
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttattttt------caacatcaaattaatgttccaagagttaatat 107  Q
    |||||||||||| ||||||||||| || ||||||||| |||||||||||||  ||||| |||      |||||||| |||||||||||||||||||||||    
T  38622243 caattcacacaacattagatcaaagtataattacttgatttttaatcttccaatttatatttattactcaacatcacattaatgttccaagagttaatat 38622342  T
Q  108 ggaggattggaattccctcatgaagcttcaaatcttacccacaaaaacagaaacttatta 167  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||||||    
T  38622343 ggaggattggaattccctcatgaagcttcaaatcttgcccacaaaaacaaaaatttatta 38622402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 38622717 - 38622778
Alignment:
Q  159 aacttattaagcaaagaaatcaacaaaatcatgaatataatcaatgatttatatgaggaagg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38622717 aacttattaagcaaagaaatcaacaaaatcatgaatataatcaatgatttatatgaggaagg 38622778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 10136379 - 10136462
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  10136379 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 10136462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 25844810 - 25844858
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  25844810 caattcacacaacattagatcaaagtataattacttggtgtttaatctt 25844858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 6e-21; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 40150249 - 40150332
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||||||||||||||||| | |||||||||||    
T  40150249 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttatttttcaacatcacactaatgttccaa 40150332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 10759402 - 10759321
Alignment:
Q  15 aattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    ||||||||||| |||| ||||||||| ||||||||| | |||||||||||  |||||||| |||||||| | |||||||||||    
T  10759402 aattcacacaacattaaatcaaaatataattacttg-tgtttaatcttccaatttattttccaacatcacactaatgttccaa 10759321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 36424692 - 36424775
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||| | || ||||||||||| |||||||||||  ||| || | |||||||| || ||||||||||    
T  36424692 caattcacacaacattagatcatagtataattacttggtgtttaatcttccaattttttatccaacatcacatcaatgttccaa 36424775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 102
Target Start/End: Complemental strand, 29167015 - 29166927
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaagagtt 102  Q
    |||||||||||| |||| |||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || |||||||||| ||||    
T  29167015 caattcacacaacattaaatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacagtt 29166927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 37247841 - 37247793
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  37247841 caattcacacaacattagatcaaagtataattacttggtgtttaatctt 37247793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 6154474 - 6154391
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| |||||||||||||| ||||||||| | |||||| ||||  ||| |  | |||||||| || ||||||||||    
T  6154474 caattcacacaacattagatcaaaatataattacttgatgtttaattttccaatttttcatccaacatcacatcaatgttccaa 6154391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 26668332 - 26668415
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||| ||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  26668332 caattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 26668415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 26939929 - 26940012
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||| ||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  26939929 caattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 26940012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 20180197 - 20180147
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| ||||||| ||| || ||||||||||| |||||||||||    
T  20180197 caattcacacaacattagattaaagtataattacttggtgtttaatcttcc 20180147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 37646097 - 37646047
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| ||||||||||| || ||||||||| | |||||||||||    
T  37646097 caattcacacaacattagatcaaagtataattacttgatgtttaatcttcc 37646047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 39519439 - 39519487
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || | ||||||||| |||||||||    
T  39519439 caattcacacaacattagatcaaagtatatttacttggtgtttaatctt 39519487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 1e-18; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 1808504 - 1808587
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  |||||||| |||||||| | |||||||||||    
T  1808504 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcacactaatgttccaa 1808587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 1909989 - 1909906
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  |||||||| |||||||| | |||||||||||    
T  1909989 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcatactaatgttccaa 1909906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 44924963 - 44924880
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||||||||||||||| || ||||  || || |||||||||||  |||||||| |||||||| | |||||||||||    
T  44924963 caattcacacaagattagatcaaagtataattgattagtgtttaatcttccaatttattttccaacatcacactaatgttccaa 44924880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 40124936 - 40124888
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || | ||||||||| |||||||||    
T  40124936 caattcacacaacattagatcaaagtatatttacttggtgtttaatctt 40124888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 13060521 - 13060604
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||  |||||||||||  ||||||||||||||||| | |||||||||||    
T  13060521 caattcacacaatattagatcaaagtataattacttggggtttaatcttccaatttatttttcaacatcacactaatgttccaa 13060604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 14 - 83
Target Start/End: Original strand, 16422100 - 16422169
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatca 83  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  |||||||| ||||||||    
T  16422100 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatca 16422169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 12822952 - 12822869
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||| ||||| ||| |||||||  |||||||| |||||||| | |||||||||||    
T  12822952 caattcacacaacattagatcaaagtataattatttggtgtttgatcttccaatttattttccaacatcacactaatgttccaa 12822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 5270465 - 5270382
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  5270465 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 5270382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 8694767 - 8694850
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  8694767 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 8694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 31728408 - 31728325
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  31728408 caattcacacaacattagatcaaattataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 31728325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 19907342 - 19907390
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| | |||||||||||| ||||||||||| |||||||||    
T  19907342 caattcacacaacactagatcaaaatataattacttggtgtttaatctt 19907390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 31274568 - 31274616
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  31274568 caattcacacaacattagatcaaagtataattacttggtgtttaatctt 31274616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 37263605 - 37263557
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  37263605 caattcacacaacattagatcaaagtataattacttggtgtttaatctt 37263557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 5925846 - 5925763
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| |||| |||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  5925846 caattcacacaacattatatcaaagtataattacttggtatttaatcttccaatttttcatccaacatcacatcaatgttccaa 5925763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 33468045 - 33467962
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    ||||| |||||| ||||||||||| || ||||||||||| ||||||||| |  ||| | || |||||||| | |||||||||||    
T  33468045 caatttacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcttccaacatcacactaatgttccaa 33467962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 3e-16; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 12802336 - 12802419
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||| ||| || ||||||||||| |||||||||||  |||||||| |||||||| | |||||||||||    
T  12802336 caattcacacaacattagattaaagtataattacttggtgtttaatcttccaatttattttccaacatcacactaatgttccaa 12802419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 42625620 - 42625538
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    ||||||||| || ||||||||||| || ||||||||||| |||||||||||  |||||||||||| |||| | |||||||||||    
T  42625620 caattcacataacattagatcaaagtataattacttggtgtttaatcttccaatttatttttcaa-atcacactaatgttccaa 42625538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 3881025 - 3881075
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||| ||| ||||||||||| || ||||||||||| |||||||||||    
T  3881025 caattcacgcaatattagatcaaagtataattacttggtatttaatcttcc 3881075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 44508338 - 44508288
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| ||||||||||| || ||||||||| | |||||||||||    
T  44508338 caattcacacaatattagatcaaagtataattacttgatatttaatcttcc 44508288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 4931277 - 4931325
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| |||| |||||| || ||||||||||| |||||||||    
T  4931277 caattcacacaacattatatcaaagtataattacttggtgtttaatctt 4931325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 10392129 - 10392081
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| | ||||||||| || ||||||||||| |||||||||    
T  10392129 caattcacacaacactagatcaaagtataattacttggtgtttaatctt 10392081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 36175 - 36257
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttcca 96  Q
    ||||||| |||| |||||||||||||| ||||| ||||| ||||||||| |  ||||||||||||||||| | ||||||||||    
T  36175 caattcatacaacattagatcaaaatataattatttggtgtttaatctttcaatttatttttcaacatcacactaatgttcca 36257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Complemental strand, 33686686 - 33686606
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttc 94  Q
    |||||||||||| ||||||||||| || ||||| ||| | |||||||||||  |||||||| |||||||| ||||||||||    
T  33686686 caattcacacaaaattagatcaaagtataattatttgatgtttaatcttccaatttattttccaacatcacattaatgttc 33686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 11533744 - 11533661
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||||||||   |||||| | |||||||| | |||||||||||    
T  11533744 caattcacacaacattagatcaaactataattacttggtgtttaatcttctaatttattctccaacatcacactaatgttccaa 11533661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 11559254 - 11559171
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||||||||   |||||| | |||||||| | |||||||||||    
T  11559254 caattcacacaacattagatcaaactataattacttggtgtttaatcttctaatttattctccaacatcacactaatgttccaa 11559171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 11569734 - 11569652
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||||||||   |||| ||| |||||||| | |||||||||||    
T  11569734 caattcacacaacattagatcaaagtataattacttggtgtttaatcttctaattta-tttgcaacatcacactaatgttccaa 11569652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 22694427 - 22694377
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||    
T  22694427 caattcacacaacattagatcaaagtataattacttggtgtttaatcttcc 22694377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 2699154 - 2699073
Alignment:
Q  16 attcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||| ||||||| ||| || ||||||||| | |||||||||||  |||||||| |||||||| | | |||||||||    
T  2699154 attcacacaacattagattaaagtataattacttgatgtttaatcttccaatttattttccaacatcatactgatgttccaa 2699073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 17600431 - 17600481
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| ||||||||||| ||  |||||||||| |||||||||||    
T  17600431 caattcacacaacattagatcaaagtatgattacttggtgtttaatcttcc 17600481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 6406902 - 6406854
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| | ||||||||| || ||||||||||| |||||||||    
T  6406902 caattcacacaacaatagatcaaagtataattacttggtgtttaatctt 6406854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 20175444 - 20175527
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    ||||| |||||| ||||||||||| || ||||||||||| ||||||||| |  |||||||| |||||||| | |||||||||||    
T  20175444 caattaacacaacattagatcaaagtataattacttggtgtttaatctttcaatttattttccaacatcacactaatgttccaa 20175527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 20521015 - 20521098
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||| | || |||||||| | |||||||||||    
T  20521015 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcttccaacatcacactaatgttccaa 20521098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 46965066 - 46965149
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||| ||||| |||||||||||  |||||||| |||||| | | |||||||||||    
T  46965066 caattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacattacactaatgttccaa 46965149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 757406 - 757323
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  757406 caattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 757323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 7570257 - 7570174
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| ||||||||| |  ||| |  | |||||||| |||||||||||||    
T  7570257 caattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacattaatgttccaa 7570174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18468266 - 18468349
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  18468266 caattcacacaacattagatcaaactataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 18468349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 32473185 - 32473136
Alignment:
Q  15 aattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    ||||||||||| ||||||||||| || ||||||||||| |||||||||||    
T  32473185 aattcacacaacattagatcaaagtataattacttggtgtttaatcttcc 32473136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 23660531 - 23660483
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  23660531 caattcacacaacattagatcaaagtataattacttggtgtttaatctt 23660483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 23665163 - 23665115
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  23665163 caattcacacaacattagatcaaagtataattacttggtgtttaatctt 23665115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 12970850 - 12970767
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| |||| |||||  || ||||||||||| |||||||||||| ||| |  | |||||||| || ||||||||||    
T  12970850 caattcacacaacattaaatcaacgtataattacttggtgtttaatcttccgatttttcatccaacatcatatcaatgttccaa 12970767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 18473060 - 18473143
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || |||||||| || |||||||||||  ||| |  | |||||||| || ||||||||||    
T  18473060 caattcacacaacattagatcaaagtataattactttgtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 18473143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 3426125 - 3426207
Alignment:
Q  15 aattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    ||||||||||| || |||| ||| || ||||||||||| |||||||||    |||||||| |||||||| | |||||||||||    
T  3426125 aattcacacaacataagattaaagtataattacttggtgtttaatctttaaatttattttccaacatcacactaatgttccaa 3426207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 55326831 - 55326880
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||    
T  55326831 caattcacacaacattagatcaaa-tataattacttggtgtttaatcttcc 55326880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 12361299 - 12361382
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||| ||||| |||||||||||  |||||||| ||||| || | |||||||||||    
T  12361299 caattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacaccacactaatgttccaa 12361382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 83
Target Start/End: Complemental strand, 25496426 - 25496357
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatca 83  Q
    |||||||||||| ||||||||||| || ||||| ||||| |||||||||||  |||||||| ||||||||    
T  25496426 caattcacacaatattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacatca 25496357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 19891549 - 19891466
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||||||||||||||| || |||||| |||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  19891549 caattcacacaagattagatcaaagtataattacatggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 19891466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 9179768 - 9179718
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||    
T  9179768 caattcacacaacattagatcaaagtataattacttggtgtttaatcttcc 9179718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 18345471 - 18345553
Alignment:
Q  15 aattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    ||||||||||| ||||||||||| || ||||||||||| |||||||||||  ||| |  | |||||||| || ||||||||||    
T  18345471 aattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 18345553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 20101692 - 20101642
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||||    
T  20101692 caattcacacaacattagatcaaagtataattacttggtgtttaatcttcc 20101642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 25477330 - 25477248
Alignment:
Q  15 aattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    ||||| ||||| |||| |||||| || ||||| ||| | |||||||||||  ||||||||||||||||| | |||||||||||    
T  25477330 aattcgcacaacattaaatcaaagtataattatttgatgtttaatcttccaatttatttttcaacatcacactaatgttccaa 25477248  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 1934051 - 1934003
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  1934051 caattcacacaacattagatcaaagtataattacttggtgtttaatctt 1934003  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 19897002 - 19897090
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaagagtt 102  Q
    |||||||||||| |||| ||||||||| ||||||||| | |||||||||||  ||| | || |||||||| |  |||||||||| ||||    
T  19897002 caattcacacaacattatatcaaaatataattacttgatatttaatcttccattttctcttccaacatcataccaatgttccaatagtt 19897090  T

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Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 29678732 - 29678820
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaagagtt 102  Q
    |||||||||||| |||||||||||||| |||| ||| || |||||||||||  ||| | || |||||||| | ||||||| ||| ||||    
T  29678732 caattcacacaacattagatcaaaatataattccttagtatttaatcttccaatttttcttccaacatcacactaatgttgcaacagtt 29678820  T

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Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 30651968 - 30652016
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || ||||||||||| |||||||||    
T  30651968 caattcacacaacattagatcaaagtataattacttggtgtttaatctt 30652016  T

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Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 12797984 - 12798067
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||| ||||| |||||||||||  ||| | || |||||||| | |||| ||||||    
T  12797984 caattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcttccaacatcacactaatattccaa 12798067  T

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Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 17968005 - 17967923
Alignment:
Q  15 aattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    ||||||||||| ||||||||||| || ||||||||| | |||||||||||  ||| |  | |||||||| || ||||||||||    
T  17968005 aattcacacaacattagatcaaagtataattacttgatgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 17967923  T

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Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 28604139 - 28604189
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| | |||||||||||  ||||||||||| |||||||||||    
T  28604139 caattcacacaacactagatcaaaatttaattacttggtgtttaatcttcc 28604189  T

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Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 30231 - 30281
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttcc 64  Q
    |||||||||||| |||||||||||||| ||||||||||| |||||||||||    
T  30231 caattcacacaacattagatcaaaatataattacttggtgtttaatcttcc 30281  T

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Target: scaffold0352 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Original strand, 8163 - 8246
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| |||| |||||| || ||||||||||| |||||||||||  |||||  | |||||||  || ||||||||||    
T  8163 caattcacacaacattaaatcaaagtataattacttggtgtttaatcttccaatttatcatccaacatcgcatcaatgttccaa 8246  T

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Target: scaffold0002 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 97
Target Start/End: Complemental strand, 442982 - 442899
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatcttccggtttatttttcaacatcaaattaatgttccaa 97  Q
    |||||||||||| ||||||||||| || ||||| ||  | |||||||||||  |||||||| |||||||| | |||| ||||||    
T  442982 caattcacacaacattagatcaaagtataattatttaatgtttaatcttccaatttattttccaacatcacagtaatattccaa 442899  T

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Target: scaffold0240 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 5023 - 5071
Alignment:
Q  14 caattcacacaagattagatcaaaatagaattacttggtttttaatctt 62  Q
    |||||||||||| ||||||||||| || |||||| |||| |||||||||    
T  5023 caattcacacaacattagatcaaagtataattacgtggtgtttaatctt 5071  T

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