View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10036_low_15 (Length: 279)
Name: NF10036_low_15
Description: NF10036
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10036_low_15 |
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Alignment Details
Target: chr5 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 259
Target Start/End: Complemental strand, 7499314 - 7499056
Alignment:
| Q |
1 |
agattctttaccagccaaaaactgaggatgatttttctttgcagcagtgctgaatcccataaaaacaagtgtctgattaacaaatgacatttgagccatt |
100 |
Q |
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| T |
7499314 |
agattctttaccagccaaaaactgaggatgatttttctttgcagcagtgctgaatcccataaaaacaagtggctgattaacaaatgacatttgagccatt |
7499215 |
T |
|
| Q |
101 |
ggatgaaacctaggcaccacaaaaacatctccttgctgaactctaaacctcttgtttttgcatttgtcatcattgttgcttccacataccactcttacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7499214 |
ggatgaaacctaggcaccacaaaaacatctccttgctgaactctaaacctcttgtttttgcatttgtcatcattgttgcttccacataccactcttacca |
7499115 |
T |
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| Q |
201 |
ttccttccccttccaacaccactgctacttctgttgccattggattccaatgtggcccc |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7499114 |
ttccttccccttccaacaccactgctacttctgttgccattggattccaatgtggcccc |
7499056 |
T |
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