View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10037_low_7 (Length: 210)

Name: NF10037_low_7
Description: NF10037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10037_low_7
NF10037_low_7
[»] chr5 (46 HSPs)
chr5 (1-195)||(43463618-43463811)
chr5 (1-56)||(37610202-37610257)
chr5 (1-56)||(37780320-37780375)
chr5 (1-55)||(22729438-22729492)
chr5 (1-56)||(12498567-12498623)
chr5 (1-56)||(12498926-12498982)
chr5 (1-56)||(26571162-26571218)
chr5 (5-56)||(43464194-43464245)
chr5 (1-53)||(21207229-21207282)
chr5 (1-53)||(10098939-10098991)
chr5 (1-56)||(19514961-19515017)
chr5 (1-56)||(19514525-19514582)
chr5 (6-56)||(22729008-22729058)
chr5 (1-53)||(2817152-2817205)
chr5 (10-54)||(2817582-2817626)
chr5 (1-56)||(3888239-3888295)
chr5 (1-56)||(18817609-18817665)
chr5 (1-56)||(26570729-26570785)
chr5 (5-56)||(34147512-34147564)
chr5 (7-53)||(11316717-11316764)
chr5 (1-56)||(22428934-22428989)
chr5 (1-56)||(22429194-22429249)
chr5 (5-56)||(37610620-37610671)
chr5 (1-53)||(30401885-30401938)
chr5 (3-56)||(41383167-41383220)
chr5 (1-53)||(9665560-9665611)
chr5 (1-56)||(18433015-18433071)
chr5 (1-56)||(18816952-18817008)
chr5 (1-56)||(26020450-26020506)
chr5 (5-53)||(31569910-31569958)
chr5 (5-56)||(37780744-37780796)
chr5 (1-56)||(34577162-34577217)
chr5 (68-138)||(41768182-41768253)
chr5 (7-56)||(10098519-10098569)
chr5 (7-56)||(16466746-16466796)
chr5 (3-56)||(25115757-25115811)
chr5 (3-56)||(25174849-25174903)
chr5 (1-53)||(3888660-3888713)
chr5 (1-53)||(11351425-11351478)
chr5 (4-56)||(25940521-25940574)
chr5 (3-56)||(34147141-34147193)
chr5 (4-53)||(41072215-41072264)
chr5 (4-56)||(9665828-9665879)
chr5 (1-56)||(11350808-11350863)
chr5 (4-56)||(23011079-23011131)
chr5 (1-53)||(34576870-34576922)
[»] chr4 (46 HSPs)
chr4 (1-56)||(48405962-48406017)
chr4 (1-56)||(26207361-26207416)
chr4 (1-56)||(4239364-4239420)
chr4 (1-56)||(9023244-9023300)
chr4 (1-56)||(28196771-28196827)
chr4 (1-56)||(32703648-32703704)
chr4 (1-56)||(23539841-23539895)
chr4 (1-55)||(25161879-25161934)
chr4 (1-56)||(169013-169070)
chr4 (7-56)||(292782-292832)
chr4 (1-56)||(293215-293271)
chr4 (1-56)||(9023678-9023734)
chr4 (1-56)||(9380307-9380363)
chr4 (1-56)||(9380739-9380795)
chr4 (1-56)||(26207744-26207800)
chr4 (1-56)||(28196346-28196402)
chr4 (1-56)||(39744463-39744519)
chr4 (3-56)||(3930480-3930533)
chr4 (4-56)||(23540253-23540306)
chr4 (1-56)||(169437-169493)
chr4 (5-56)||(39086625-39086677)
chr4 (1-56)||(39744030-39744086)
chr4 (1-56)||(50678779-50678835)
chr4 (1-56)||(56505693-56505749)
chr4 (1-56)||(11241659-11241714)
chr4 (1-55)||(43292038-43292093)
chr4 (3-56)||(32703225-32703279)
chr4 (1-53)||(36096473-36096526)
chr4 (5-42)||(44468925-44468962)
chr4 (4-53)||(48406386-48406435)
chr4 (1-56)||(16555815-16555871)
chr4 (67-130)||(19498949-19499013)
chr4 (3-55)||(22681576-22681628)
chr4 (1-56)||(24775781-24775837)
chr4 (1-56)||(36095817-36095873)
chr4 (1-56)||(43292355-43292411)
chr4 (1-56)||(50679422-50679478)
chr4 (66-138)||(55431127-55431199)
chr4 (3-55)||(8181992-8182046)
chr4 (3-56)||(18077202-18077256)
chr4 (3-52)||(49178816-49178866)
chr4 (66-138)||(12727090-12727163)
chr4 (3-56)||(35393776-35393829)
chr4 (5-56)||(22681881-22681933)
chr4 (1-56)||(43051250-43051306)
chr4 (9-56)||(56506580-56506628)
[»] chr3 (43 HSPs)
chr3 (1-56)||(42672978-42673033)
chr3 (1-56)||(47666333-47666389)
chr3 (1-56)||(3353128-3353183)
chr3 (1-56)||(24485458-24485513)
chr3 (1-56)||(40848521-40848576)
chr3 (1-56)||(42673294-42673349)
chr3 (1-56)||(40848959-40849015)
chr3 (1-56)||(48159897-48159953)
chr3 (5-56)||(44008403-44008454)
chr3 (1-53)||(27238898-27238951)
chr3 (4-56)||(53766580-53766633)
chr3 (5-49)||(3353553-3353597)
chr3 (1-56)||(48160331-48160387)
chr3 (1-56)||(53687888-53687944)
chr3 (1-56)||(26007182-26007237)
chr3 (1-56)||(53688301-53688356)
chr3 (1-54)||(22429594-22429647)
chr3 (4-56)||(27238465-27238518)
chr3 (3-56)||(47871122-47871175)
chr3 (4-56)||(8315083-8315135)
chr3 (1-56)||(10348797-10348853)
chr3 (1-53)||(24485025-24485077)
chr3 (1-56)||(21896509-21896564)
chr3 (74-136)||(53504511-53504574)
chr3 (3-56)||(20969019-20969073)
chr3 (3-53)||(26540694-26540744)
chr3 (4-56)||(8314013-8314066)
chr3 (3-56)||(9027033-9027086)
chr3 (8-56)||(42455790-42455839)
chr3 (1-53)||(53766166-53766219)
chr3 (4-55)||(22429159-22429211)
chr3 (6-53)||(26007622-26007670)
chr3 (1-56)||(36180988-36181044)
chr3 (5-56)||(47665911-47665963)
chr3 (1-55)||(10348480-10348535)
chr3 (1-56)||(36180556-36180610)
chr3 (1-56)||(42456193-42456247)
chr3 (3-56)||(17372298-17372352)
chr3 (66-131)||(32517868-32517934)
chr3 (7-56)||(44007967-44008017)
chr3 (1-53)||(1928432-1928484)
chr3 (1-53)||(14015962-14016014)
chr3 (3-55)||(17372594-17372645)
[»] chr1 (61 HSPs)
chr1 (1-56)||(9347549-9347604)
chr1 (1-56)||(27172116-27172171)
chr1 (1-56)||(49317752-49317807)
chr1 (3-56)||(20371353-20371406)
chr1 (1-56)||(4692431-4692487)
chr1 (1-56)||(6703892-6703948)
chr1 (4-56)||(20480613-20480665)
chr1 (1-56)||(20480168-20480223)
chr1 (1-56)||(50615619-50615674)
chr1 (1-56)||(50623447-50623502)
chr1 (1-56)||(9347126-9347182)
chr1 (1-56)||(32163041-32163097)
chr1 (1-56)||(46824276-46824332)
chr1 (1-56)||(48105114-48105170)
chr1 (1-56)||(999523-999578)
chr1 (1-56)||(20371040-20371094)
chr1 (1-56)||(47498301-47498355)
chr1 (1-56)||(49318164-49318219)
chr1 (1-55)||(47498493-47498547)
chr1 (1-54)||(50526470-50526524)
chr1 (1-53)||(50430079-50430132)
chr1 (1-53)||(999115-999167)
chr1 (1-56)||(13918446-13918502)
chr1 (8-56)||(19007735-19007783)
chr1 (1-56)||(21687025-21687081)
chr1 (1-56)||(26814694-26814750)
chr1 (1-56)||(28633720-28633776)
chr1 (5-55)||(13918869-13918920)
chr1 (3-54)||(17518602-17518653)
chr1 (3-56)||(13589659-13589712)
chr1 (1-53)||(28634155-28634208)
chr1 (5-53)||(42611188-42611237)
chr1 (1-53)||(46823846-46823899)
chr1 (1-53)||(48104681-48104734)
chr1 (1-56)||(8108991-8109047)
chr1 (1-56)||(19008748-19008804)
chr1 (1-56)||(26815117-26815173)
chr1 (1-56)||(39691998-39692054)
chr1 (1-56)||(44911025-44911081)
chr1 (1-56)||(48190771-48190827)
chr1 (1-56)||(49284409-49284465)
chr1 (9-56)||(21687473-21687520)
chr1 (1-36)||(32162750-32162785)
chr1 (4-43)||(44911438-44911477)
chr1 (1-56)||(49318441-49318496)
chr1 (3-56)||(47955306-47955360)
chr1 (7-56)||(1176717-1176766)
chr1 (66-138)||(33569646-33569719)
chr1 (5-53)||(42611616-42611665)
chr1 (8-56)||(50615240-50615289)
chr1 (8-56)||(50623068-50623117)
chr1 (5-56)||(6703460-6703512)
chr1 (1-56)||(27172539-27172595)
chr1 (1-56)||(48191353-48191409)
chr1 (3-53)||(1176839-1176890)
chr1 (66-127)||(22159027-22159089)
chr1 (3-56)||(22149403-22149455)
chr1 (4-56)||(39690794-39690847)
chr1 (3-56)||(41083211-41083264)
chr1 (5-53)||(50949164-50949213)
chr1 (1-56)||(6002237-6002293)
[»] scaffold0069 (2 HSPs)
scaffold0069 (3-56)||(50507-50560)
scaffold0069 (1-56)||(50075-50129)
[»] scaffold0460 (2 HSPs)
scaffold0460 (1-56)||(761-816)
scaffold0460 (1-56)||(330-386)
[»] chr7 (46 HSPs)
chr7 (1-56)||(13744231-13744286)
chr7 (1-56)||(48359320-48359375)
chr7 (1-56)||(9035291-9035347)
chr7 (1-56)||(10533034-10533090)
chr7 (1-53)||(22740589-22740641)
chr7 (1-56)||(37888833-37888889)
chr7 (1-56)||(37889257-37889313)
chr7 (1-56)||(37972394-37972450)
chr7 (1-56)||(3204669-3204723)
chr7 (5-56)||(18864404-18864455)
chr7 (3-53)||(42419029-42419079)
chr7 (1-53)||(20418891-20418944)
chr7 (1-56)||(17156967-17157023)
chr7 (1-56)||(20419322-20419378)
chr7 (1-56)||(22740156-22740212)
chr7 (1-56)||(29292922-29292978)
chr7 (1-53)||(36527387-36527439)
chr7 (1-56)||(37971960-37972016)
chr7 (3-56)||(3205093-3205147)
chr7 (1-53)||(18863970-18864023)
chr7 (3-55)||(8953889-8953941)
chr7 (1-56)||(13741557-13741613)
chr7 (1-56)||(16198975-16199031)
chr7 (4-56)||(23686421-23686473)
chr7 (1-56)||(29293344-29293400)
chr7 (1-56)||(44599489-44599545)
chr7 (1-56)||(44600133-44600189)
chr7 (5-52)||(48359660-48359707)
chr7 (3-56)||(3687656-3687710)
chr7 (3-56)||(9034867-9034921)
chr7 (3-56)||(9412325-9412379)
chr7 (1-56)||(13863313-13863369)
chr7 (5-56)||(38826915-38826967)
chr7 (9-56)||(27096047-27096094)
chr7 (9-56)||(27182209-27182256)
chr7 (3-56)||(13772901-13772955)
chr7 (1-55)||(18925320-18925373)
chr7 (4-53)||(6908485-6908534)
chr7 (4-56)||(6908213-6908265)
chr7 (1-56)||(8643764-8643820)
chr7 (1-56)||(13772641-13772697)
chr7 (1-56)||(13863955-13864010)
chr7 (5-56)||(18925062-18925114)
chr7 (4-56)||(35079960-35080012)
chr7 (1-56)||(36527796-36527852)
chr7 (9-56)||(42418591-42418639)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-56)||(38693-38749)
[»] scaffold0017 (2 HSPs)
scaffold0017 (1-56)||(185272-185328)
scaffold0017 (1-55)||(184840-184895)
[»] chr2 (42 HSPs)
chr2 (1-56)||(17850978-17851034)
chr2 (1-56)||(37720204-37720260)
chr2 (3-56)||(5378661-5378715)
chr2 (1-55)||(16911267-16911321)
chr2 (1-55)||(18750124-18750178)
chr2 (1-53)||(8851151-8851204)
chr2 (1-53)||(26692818-26692871)
chr2 (1-56)||(7664671-7664727)
chr2 (1-56)||(8851580-8851636)
chr2 (1-56)||(16910827-16910883)
chr2 (1-53)||(41790494-41790546)
chr2 (1-56)||(7980001-7980056)
chr2 (3-56)||(5379959-5380013)
chr2 (5-54)||(6325349-6325399)
chr2 (1-54)||(19141446-19141499)
chr2 (74-138)||(37326536-37326601)
chr2 (1-56)||(2639480-2639536)
chr2 (1-56)||(7664248-7664304)
chr2 (1-56)||(18296691-18296747)
chr2 (1-53)||(19141847-19141898)
chr2 (1-56)||(26841587-26841643)
chr2 (1-56)||(41790910-41790966)
chr2 (3-56)||(20347464-20347518)
chr2 (3-56)||(30190923-30190977)
chr2 (3-53)||(32673143-32673193)
chr2 (66-138)||(5663992-5664065)
chr2 (1-49)||(6324924-6324973)
chr2 (66-138)||(26403654-26403727)
chr2 (1-53)||(26692399-26692452)
chr2 (7-56)||(38490845-38490894)
chr2 (1-56)||(2638820-2638876)
chr2 (1-56)||(24832331-24832387)
chr2 (1-56)||(26842236-26842292)
chr2 (7-53)||(5793450-5793497)
chr2 (5-56)||(6171156-6171207)
chr2 (1-56)||(7979567-7979621)
chr2 (1-55)||(18296077-18296132)
chr2 (3-56)||(6171456-6171510)
chr2 (3-56)||(11883623-11883677)
chr2 (3-56)||(11883926-11883980)
chr2 (1-53)||(7591204-7591257)
chr2 (7-56)||(43495609-43495658)
[»] scaffold0176 (2 HSPs)
scaffold0176 (1-56)||(19621-19676)
scaffold0176 (1-56)||(20041-20097)
[»] chr8 (42 HSPs)
chr8 (5-56)||(16169174-16169225)
chr8 (1-54)||(25438794-25438848)
chr8 (1-56)||(24473343-24473399)
chr8 (1-56)||(24473766-24473822)
chr8 (1-53)||(25439124-25439176)
chr8 (1-56)||(34498553-34498609)
chr8 (1-56)||(37396708-37396764)
chr8 (1-56)||(37397143-37397199)
chr8 (5-56)||(41662521-41662573)
chr8 (1-56)||(13936723-13936778)
chr8 (1-53)||(34498125-34498178)
chr8 (1-56)||(2856526-2856582)
chr8 (1-56)||(6199094-6199150)
chr8 (1-56)||(9623502-9623558)
chr8 (1-56)||(9823359-9823415)
chr8 (1-56)||(20861636-20861692)
chr8 (1-56)||(39724046-39724102)
chr8 (1-56)||(9623880-9623935)
chr8 (5-56)||(43162234-43162285)
chr8 (3-56)||(41662403-41662457)
chr8 (1-53)||(13027279-13027332)
chr8 (1-53)||(15444645-15444698)
chr8 (66-130)||(42451929-42451994)
chr8 (3-54)||(765736-765788)
chr8 (5-56)||(12281124-12281176)
chr8 (5-56)||(13026635-13026687)
chr8 (5-56)||(17431287-17431339)
chr8 (1-56)||(22851390-22851446)
chr8 (1-56)||(37752084-37752140)
chr8 (68-138)||(31462186-31462257)
chr8 (8-54)||(33726696-33726743)
chr8 (10-56)||(9465607-9465653)
chr8 (3-56)||(15156185-15156239)
chr8 (7-56)||(16169611-16169661)
chr8 (3-56)||(16929242-16929296)
chr8 (66-131)||(25720045-25720111)
chr8 (4-56)||(3463946-3463999)
chr8 (10-54)||(15444213-15444258)
chr8 (3-52)||(43162539-43162588)
chr8 (1-56)||(9822748-9822804)
chr8 (1-56)||(13937387-13937443)
chr8 (1-56)||(23123338-23123394)
[»] chr6 (24 HSPs)
chr6 (1-56)||(22684356-22684411)
chr6 (1-56)||(22754657-22754712)
chr6 (1-56)||(29074370-29074425)
chr6 (1-56)||(29079134-29079189)
chr6 (1-56)||(29106943-29106998)
chr6 (1-56)||(7654546-7654602)
chr6 (1-56)||(10087856-10087912)
chr6 (1-56)||(33974297-33974353)
chr6 (3-53)||(3825530-3825580)
chr6 (3-56)||(10039676-10039729)
chr6 (3-56)||(13579651-13579704)
chr6 (1-53)||(32733994-32734047)
chr6 (1-56)||(33828990-33829046)
chr6 (1-56)||(33829634-33829690)
chr6 (3-56)||(21031979-21032032)
chr6 (3-56)||(33655115-33655168)
chr6 (1-56)||(2354808-2354864)
chr6 (1-56)||(3403717-3403773)
chr6 (1-56)||(2354409-2354464)
chr6 (3-56)||(3403989-3404043)
chr6 (5-54)||(403651-403700)
chr6 (66-126)||(17738943-17739004)
chr6 (7-56)||(30388062-30388111)
chr6 (1-53)||(31598726-31598778)
[»] scaffold0110 (2 HSPs)
scaffold0110 (3-56)||(45807-45860)
scaffold0110 (6-56)||(45537-45587)
[»] scaffold0015 (1 HSPs)
scaffold0015 (5-56)||(17158-17209)
[»] scaffold0029 (2 HSPs)
scaffold0029 (3-56)||(9905-9959)
scaffold0029 (4-56)||(10320-10371)
[»] scaffold0319 (2 HSPs)
scaffold0319 (3-56)||(6697-6750)
scaffold0319 (3-56)||(6394-6448)
[»] scaffold0802 (1 HSPs)
scaffold0802 (3-56)||(1420-1474)
[»] scaffold0002 (1 HSPs)
scaffold0002 (3-56)||(411923-411976)
[»] scaffold0328 (1 HSPs)
scaffold0328 (1-56)||(6793-6849)
[»] scaffold1221 (1 HSPs)
scaffold1221 (1-56)||(1511-1566)
[»] scaffold0598 (1 HSPs)
scaffold0598 (4-55)||(6877-6927)
[»] scaffold0376 (2 HSPs)
scaffold0376 (1-56)||(7455-7510)
scaffold0376 (3-56)||(7600-7653)
[»] scaffold0192 (1 HSPs)
scaffold0192 (3-56)||(25369-25423)
[»] scaffold0001 (2 HSPs)
scaffold0001 (3-56)||(438930-438984)
scaffold0001 (4-53)||(183367-183416)
[»] scaffold0009 (1 HSPs)
scaffold0009 (3-56)||(205687-205740)


Alignment Details
Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 43463811 - 43463618
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagccnnnnnnnnnaaaaataaattcaatagaagaaattatacatatag 100  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||          |||||| ||||||||||||||||||||||| |||    
T  43463811 atggggtgcaaaatcgcacaattggcaaactataaggggaaaagtgcaattaaaccttttctct--aaaatagattcaatagaagaaattatacatgtag 43463714  T
Q  101 ag-ctttcaaaaaggaaataaagtaaaccggaggagaggtgaacacaaattgcaagacttccaccgtcaataaacaccatgttgatggcattattg 195  Q
     | |||| |||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43463713 gggctttgaaaaagaaaagaaagtaaaccggaggagagatgaacacaaattgcaagacttccaccgtcaataaacaccatgttgatggcattattg 43463618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37610257 - 37610202
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37610257 atggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcc 37610202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37780375 - 37780320
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  37780375 atggggtgcaaaatcacacaattggcaaactatagggggaaaagtgcaattaagcc 37780320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 22729438 - 22729492
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  22729438 atggggtgcaaaatcgcacaattggcaaattatagggggaaaagtgcaattaagc 22729492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 12498623 - 12498567
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  12498623 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 12498567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 12498926 - 12498982
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  12498926 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 12498982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26571162 - 26571218
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  26571162 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 26571218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 43464194 - 43464245
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  43464194 ggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 43464245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21207282 - 21207229
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  21207282 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 21207229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 10098939 - 10098991
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| ||||||||||| ||||||||||||||||    
T  10098939 atggggtgcaaaatcgcacaattgacaaactataggaggaaaagtgcaattaa 10098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19514961 - 19515017
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  19514961 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 19515017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19514582 - 19514525
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag--ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||||  |||| ||||||||||||||||    
T  19514582 atggggtgcaaaatcgcacaattggcaaactataggggggggaaagtgcaattaagcc 19514525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 22729058 - 22729008
Alignment:
Q  6 gtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||| ||||||||  |||||||||||||||||||||||||||||||    
T  22729058 gtgcaaaatcgcacaatttacaaactatagggggaaaagtgcaattaagcc 22729008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2817205 - 2817152
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaa 53  Q
    ||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  2817205 atgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 2817152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 54
Target Start/End: Original strand, 2817582 - 2817626
Alignment:
Q  10 aaaattgcacaattggcaaactatagggggaaaagtgcaattaag 54  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  2817582 aaaatcgcacaattcgcaaactatagggggaaaagtgcaattaag 2817626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3888295 - 3888239
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| | |||||||||||||||||| ||||||| |||||||||||||    
T  3888295 atggggtgcaaaatcgtacaattggcaaactataggggggaaatgtgcaattaagcc 3888239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18817609 - 18817665
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  18817609 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18817665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26570785 - 26570729
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||||    
T  26570785 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgtaattaagcc 26570729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 34147512 - 34147564
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  34147512 ggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcc 34147564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 11316764 - 11316717
Alignment:
Q  7 tgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaa 53  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||    
T  11316764 tgcaaaattgtacaattggcaaactataggagggaaaagtgcaattaa 11316717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22428989 - 22428934
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||  |||||||| ||||||||||||||||    
T  22428989 atggggtgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagcc 22428934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22429194 - 22429249
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||  |||||||||||| ||||||||||||    
T  22429194 atggggtgcaaaatcgcacaattagcaaaagatagggggaaaaatgcaattaagcc 22429249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 37610620 - 37610671
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||| |||||||| ||||||||||||||| ||||| ||||||||||    
T  37610620 ggtgcaaaatcgcacaattagcaaactataggggggaaagtacaattaagcc 37610671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30401938 - 30401885
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    ||||| |||||||||| |||||||||||||||||| | ||||||||||||||||    
T  30401938 atgggatgcaaaattgtacaattggcaaactatagagaggaaaagtgcaattaa 30401885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 41383167 - 41383220
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||||||||| ||||||||||    
T  41383167 ggggtgcaaaatcgcacaattagcaaaaaatagggggaaaagttcaattaagcc 41383220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9665611 - 9665560
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    ||||||||||||||||||||||| |||||  ||| ||||||||||||||||||    
T  9665611 atggggtgcaaaattgcacaattagcaaaagata-ggggaaaagtgcaattaa 9665560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18433071 - 18433015
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||  ||| ||||||||||||||||||||||    
T  18433071 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 18433015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 18817008 - 18816952
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||||||    
T  18817008 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 18816952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26020506 - 26020450
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||  |||||| |||||||||||||||||||    
T  26020506 atggggtgcaaaatcgcacaattagcaaaagatagggaggaaaagtgcaattaagcc 26020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 31569958 - 31569910
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||| ||||||||| ||||  ||||||||||||||||||||||    
T  31569958 ggtgcaaaatcgcacaattgacaaaagatagggggaaaagtgcaattaa 31569910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 37780744 - 37780796
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||| |||||||| |||||||||| ||||||||||| ||||||||||    
T  37780744 ggtgcaaaatcgcacaattagcaaactataggggggaaaagtacaattaagcc 37780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34577162 - 34577217
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  ||||||| |||||  ||||||| |||||||||||||||||    
T  34577162 atggggtgcaaaatcacacaattagcaaaagataggggaaaaagtgcaattaagcc 34577217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 138
Target Start/End: Complemental strand, 41768253 - 41768182
Alignment:
Q  68 aaataaattcaatagaagaaattatacatatagag-ctttcaaaaaggaaataaagtaaaccggaggagagg 138  Q
    ||||| |||||||||| |||||||||  | ||| | |||| |||||||||||||||||||||||| ||||||    
T  41768253 aaatagattcaatagaggaaattatatctgtaggggctttgaaaaaggaaataaagtaaaccggaagagagg 41768182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 10098569 - 10098519
Alignment:
Q  7 tgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 56  Q
    |||||||| ||||||||| ||||||||||| || |||||||||||||||||    
T  10098569 tgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaagcc 10098519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 16466746 - 16466796
Alignment:
Q  7 tgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||| |||||||| ||||| |||||||| ||||||||||||||||||    
T  16466746 tgcaaaatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 16466796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 25115811 - 25115757
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    ||||||||||||  |||||||||||||  |||||||| |||||||||||||||||    
T  25115811 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcc 25115757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 25174903 - 25174849
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    ||||||||||||  |||||||||||||  |||||||| |||||||||||||||||    
T  25174903 ggggtgcaaaatcacacaattggcaaaagataggggggaaaagtgcaattaagcc 25174849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3888660 - 3888713
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactat-agggggaaaagtgcaattaa 53  Q
    |||||||||||||| | |||||||||||| ||| || |||||||||||||||||    
T  3888660 atggggtgcaaaatcgtacaattggcaaattataagagggaaaagtgcaattaa 3888713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11351425 - 11351478
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||||||||  ||||| | |||||||||||||||    
T  11351425 atggggtgcaaaatcgcacaattggcaaaagataggagtgaaaagtgcaattaa 11351478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 25940574 - 25940521
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    ||||||||||| ||||||||| |||||||||||||  |||| ||||||||||||    
T  25940574 gggtgcaaaatcgcacaattgacaaactataggggaaaaaaatgcaattaagcc 25940521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 34147193 - 34147141
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||||  |||||||| ||| |||||||||||||||||    
T  34147193 ggggtgcaaaatcgcacaattgataaactataaggg-aaaagtgcaattaagcc 34147141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 41072215 - 41072264
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    ||||||||||| | ||||||| ||||||||||| ||||||||| ||||||    
T  41072215 gggtgcaaaatcgtacaattgacaaactataggaggaaaagtgtaattaa 41072264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 9665828 - 9665879
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||| |||||||| |||||  ||||||||||||||| |||||||||    
T  9665828 gggtgcaaaat-gcacaattagcaaaagatagggggaaaagtggaattaagcc 9665879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 11350863 - 11350808
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||||||    
T  11350863 atggggtgcaaaat-gcacaattggcaaaagataggggtgaaaaatgcaattaagcc 11350808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 23011131 - 23011079
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||| |||||||| |||||  ||| |||||||| ||||||||||||    
T  23011131 gggtgcaaaatcgcacaattagcaaaagataaggggaaaaatgcaattaagcc 23011079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34576922 - 34576870
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||| ||||| |||||||| |||||  |||||||| |||||||||||||    
T  34576922 atggggtgtaaaatcgcacaattagcaaaagataggggggaaagtgcaattaa 34576870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 5e-21; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48406017 - 48405962
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48406017 atggggtgcaaaattgcataattggcaaactatagggggaaaagtgcaattaagcc 48405962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26207416 - 26207361
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  26207416 atggggtgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 26207361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4239364 - 4239420
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  4239364 atggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4239420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9023300 - 9023244
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  9023300 atggggtgcaaaatcgcacaattggcaaactataggggagaaaagtgcaattaagcc 9023244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 28196771 - 28196827
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  28196771 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 28196827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32703648 - 32703704
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  32703648 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32703704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23539895 - 23539841
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  23539895 atggggtgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaagcc 23539841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25161934 - 25161879
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagc 55  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||||    
T  25161934 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagc 25161879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 169070 - 169013
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg--gaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||    
T  169070 atggggtgcaaaatcgcacaattggcaaactatagggggagaaaagtgcaattaagcc 169013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 292832 - 292782
Alignment:
Q  7 tgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  292832 tgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 293215 - 293271
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||    
T  293215 atggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaagcc 293271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9023678 - 9023734
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  9023678 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 9023734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9380363 - 9380307
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  9380363 atggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9380739 - 9380795
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  9380739 atggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9380795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26207744 - 26207800
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  26207744 atggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 26207800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28196402 - 28196346
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||    
T  28196402 atggggtgcaaaatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 28196346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39744463 - 39744519
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  39744463 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 39744519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 3930480 - 3930533
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||||||||||||||||||||    
T  3930480 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 3930533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 23540253 - 23540306
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    ||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||    
T  23540253 gggtgcaaaatcgcacaattgacaaactataggggtgaaaagtgcaattaagcc 23540306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 169437 - 169493
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||    
T  169437 atggggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 169493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 39086625 - 39086677
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  39086625 ggtgcaaaatcgcacaattggcaaactatatgggagaaaagtgcaattaagcc 39086677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 39744086 - 39744030
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||| ||||| |||||||||| ||||||||||||| |||||||||||||||||    
T  39744086 atggggtggaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaagcc 39744030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50678835 - 50678779
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  50678835 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 50678779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 56505749 - 56505693
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  56505749 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 56505693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 11241659 - 11241714
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  |||||||||||||  |||||||||||||| ||||||||||    
T  11241659 atggggtgcaaaatcccacaattggcaaaagatagggggaaaagtacaattaagcc 11241714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 43292093 - 43292038
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagc 55  Q
    |||||||||||||| ||||||||| |||||||||||||  ||||||||||||||||    
T  43292093 atggggtgcaaaatcgcacaattgacaaactataggggaaaaaagtgcaattaagc 43292038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 32703279 - 32703225
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||    
T  32703279 ggggtgcataatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 32703225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36096473 - 36096526
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||||||||  ||||||| |||||||||||||||    
T  36096473 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 36096526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 44468925 - 44468962
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaa 42  Q
    |||||||||| |||||||||||||||||||||||||||    
T  44468925 ggtgcaaaatcgcacaattggcaaactatagggggaaa 44468962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 48406386 - 48406435
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    ||||||||||| |||||||||||||| ||||||||| ||||| |||||||    
T  48406386 gggtgcaaaatcgcacaattggcaaattataggggggaaagtacaattaa 48406435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16555815 - 16555871
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||  ||| ||||||||||||||||||||||    
T  16555815 atggggtgcaaaatcgcacaattagcaaaagataagggggaaaagtgcaattaagcc 16555871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 19498949 - 19499013
Alignment:
Q  67 aaaataaattcaatagaagaaattatacatatagag-ctttcaaaaaggaaataaagtaaaccgg 130  Q
    |||||| | |||||||||||||||||||||  || | |||| |||||||||||||||||||||||    
T  19498949 aaaatagagtcaatagaagaaattatacatgcaggggctttgaaaaaggaaataaagtaaaccgg 19499013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 22681628 - 22681576
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    |||||||||||| ||||||||| ||||  |||||||| |||||||||||||||    
T  22681628 ggggtgcaaaatcgcacaattgacaaaagataggggggaaagtgcaattaagc 22681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24775781 - 24775837
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  24775781 atggggtgcaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 24775837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36095873 - 36095817
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||||||    
T  36095873 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 36095817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43292355 - 43292411
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| ||||||||||||||||| | ||||||||| ||||||||||||    
T  43292355 atgggatgcaaaatcgcacaattggcaaactaaaggggggaaaaatgcaattaagcc 43292411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50679422 - 50679478
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| | ||||||||||||  ||||||| ||||||||||||||||||    
T  50679422 atggggtgcaaaatcgtacaattggcaaaagataggggtgaaaagtgcaattaagcc 50679478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 55431199 - 55431127
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatatagagctttcaaaaaggaaataaagtaaaccggaggagagg 138  Q
    ||||||| |||||||||||||||||||||||  ||||  || |||||| ||| ||||||||| ||| ||||||    
T  55431199 aaaaatagattcaatagaagaaattatacatgcagaggctttaaaaagaaaagaaagtaaactggaagagagg 55431127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 8182046 - 8181992
Alignment:
Q  3 ggggtgcaaaattgcacaattggc-aaactataggggg-aaaagtgcaattaagc 55  Q
    |||||||||||| ||||||||||| |||| |||||||| ||||||||||||||||    
T  8182046 ggggtgcaaaatcgcacaattggcaaaacgatagggggcaaaagtgcaattaagc 8181992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 18077202 - 18077256
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  18077202 ggggtgcaaaatcgcacaattagcaaaaaataggggtgaaaagtgcaattaagcc 18077256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 49178816 - 49178866
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaatta 52  Q
    |||||||||||| ||||||||||||||  ||||||| ||||||||||||||    
T  49178816 ggggtgcaaaatcgcacaattggcaaaagataggggagaaaagtgcaatta 49178866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 12727090 - 12727163
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaaccggaggagagg 138  Q
    ||||||| ||||||||||||||||| ||| |  | | ||||| |||||||||| ||||||||||||| ||||||    
T  12727090 aaaaatagattcaatagaagaaattgtacctgcaggggctttgaaaaaggaaagaaagtaaaccggaagagagg 12727163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 35393776 - 35393829
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||| | |||||||| |||||  |||||| ||||||||||||||||||    
T  35393776 ggggtgcaaattcgcacaattagcaaaagatagggtgaaaagtgcaattaagcc 35393829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 22681881 - 22681933
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 56  Q
    |||||||||||||||||||  ||||  ||||| ||||||||||||||||||||    
T  22681881 ggtgcaaaattgcacaattaacaaaagataggagggaaaagtgcaattaagcc 22681933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 43051250 - 43051306
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    ||||||||||||||  |||||||||||||  ||||||| ||||| ||||||||||||    
T  43051250 atggggtgcaaaatcacacaattggcaaaagataggggtgaaaaatgcaattaagcc 43051306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 56506580 - 56506628
Alignment:
Q  9 caaaattgcacaattggcaaactat-agggggaaaagtgcaattaagcc 56  Q
    |||||||||||||||||||||  || |||| ||||||||||||||||||    
T  56506580 caaaattgcacaattggcaaaagataagggtgaaaagtgcaattaagcc 56506628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 5e-21; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 42673033 - 42672978
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  42673033 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 42672978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 47666333 - 47666389
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  47666333 atggggtgcaaaattgcacaattggcaaactataggggggaaaagtgcaattaagcc 47666389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3353183 - 3353128
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  3353183 atggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 3353128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24485458 - 24485513
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  24485458 atggggtgcaaaatcgcacaattggcaaactatagggagaaaagtgcaattaagcc 24485513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 40848576 - 40848521
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  40848576 atggggtgtaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 40848521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42673294 - 42673349
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  42673294 atggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 42673349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 40848959 - 40849015
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  40848959 atggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaagcc 40849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48159953 - 48159897
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  48159953 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 48159897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 44008403 - 44008454
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  44008403 ggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaagcc 44008454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27238898 - 27238951
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  27238898 atggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 27238951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 53766580 - 53766633
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  53766580 gggtgcaaaattgcacaatttgcaaactataggggggaaaagtgcaattaagcc 53766633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 3353553 - 3353597
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaa 49  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  3353553 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaa 3353597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48160331 - 48160387
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||||    
T  48160331 atggggtgcaaaatcgcacaattggcaaactatagggggggaaagtgcaattaagcc 48160387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 53687944 - 53687888
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  53687944 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 53687888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26007237 - 26007182
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||| ||| ||||||||||||    
T  26007237 atggggtgcaaaatcgcacaattgacaaactataggggggaaaatgcaattaagcc 26007182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 53688301 - 53688356
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  53688301 atggagtgcaaaatcgcacaattggcaaactataggggagaaagtgcaattaagcc 53688356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 22429594 - 22429647
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaag 54  Q
    |||||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  22429594 atggggtgcaaaatcgcacaattgacaaactataggagggaaagtgcaattaag 22429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 27238518 - 27238465
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 56  Q
    ||||||||||| ||||||||||||||||||||| ||||||||| ||||||||||    
T  27238518 gggtgcaaaatcgcacaattggcaaactataggagggaaaagtacaattaagcc 27238465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 47871122 - 47871175
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||||||||||||||||||||    
T  47871122 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 47871175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 8315083 - 8315135
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||| ||||||||| |||| ||||||||| ||||||||||||||||    
T  8315083 gggtgcaaaatcgcacaattgacaaaatataggggggaaagtgcaattaagcc 8315135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10348797 - 10348853
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| | || |||||||||||||||||    
T  10348797 atggggtgcaaaatcgcacaattggcaaactatatgaggaaaaagtgcaattaagcc 10348853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 24485077 - 24485025
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||||||||||||||| |||||| || ||||||    
T  24485077 atggggtgcaaaatcgcacaattggcaaactataggaggaaaaatgtaattaa 24485025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 21896509 - 21896564
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||| |||||||| |||| ||||||||||||    
T  21896509 atggggtgcaaaatcgcacaattgacaaaatataggggaaaaaatgcaattaagcc 21896564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 136
Target Start/End: Complemental strand, 53504574 - 53504511
Alignment:
Q  74 attcaatagaagaaattatacatatag-agctttcaaaaaggaaataaagtaaaccggaggaga 136  Q
    ||||||||||||||||||||| | ||| |||||| |||||||||| ||||||||||||| ||||    
T  53504574 attcaatagaagaaattatacctgtaggagctttgaaaaaggaaagaaagtaaaccggaagaga 53504511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 20969019 - 20969073
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  20969019 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20969073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 26540744 - 26540694
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||||||||||| ||||  ||||||| ||||||||||||||    
T  26540744 ggggtgcaaaattgcacaattgacaaaaaataggggcaaaagtgcaattaa 26540694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 8314066 - 8314013
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    ||||||||||| ||||||||| |||| |||||||| ||||||||||||||||||    
T  8314066 gggtgcaaaatcgcacaattgacaaaatataggggagaaaagtgcaattaagcc 8314013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 9027033 - 9027086
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||| |||||||||||||| |||||  ||||||||||||||| |||||||||    
T  9027033 ggggtgtaaaattgcacaattagcaaaagatagggggaaaagtgaaattaagcc 9027086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 42455839 - 42455790
Alignment:
Q  8 gcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  42455839 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 42455790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 53766219 - 53766166
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| ||||||||||| || ||||||||||||||    
T  53766219 atggggtgcaaaatcgcacaattgacaaactataggaggaaaaagtgcaattaa 53766166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 55
Target Start/End: Complemental strand, 22429211 - 22429159
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagc 55  Q
    ||||||||| | |||||||||||||| |||||||| |||||||||||||||||    
T  22429211 gggtgcaaagtcgcacaattggcaaaatataggggagaaaagtgcaattaagc 22429159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 26007622 - 26007670
Alignment:
Q  6 gtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaa 53  Q
    ||||||||| | |||||||||||||||||||||| ||||||||||||||    
T  26007622 gtgcaaaatcgtacaattggcaaactatagggggaaaaagtgcaattaa 26007670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36180988 - 36181044
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    ||||||| |||||| ||||||||  |||||||||||| |||||||||||||||||||    
T  36180988 atggggtacaaaatcgcacaattaacaaactatagggaggaaaagtgcaattaagcc 36181044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 47665963 - 47665911
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaa-gtgcaattaagcc 56  Q
    |||||||||| ||||||||| ||||||||| |||||||| |||||||||||||    
T  47665963 ggtgcaaaatcgcacaattgacaaactataaggggaaaaagtgcaattaagcc 47665911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10348535 - 10348480
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagc 55  Q
    ||||| |||||||||| ||||||| ||||||||| ||| |||||||||||||||||    
T  10348535 atgggatgcaaaattgaacaattgacaaactatacgggagaaaagtgcaattaagc 10348480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 36180610 - 36180556
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| ||||||||| ||||||||| ||||||| |||||||||||||    
T  36180610 atgggatgcaaaatcgcacaattgacaaactata-ggggaaatgtgcaattaagcc 36180556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 42456193 - 42456247
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||  |||| ||||||| ||||||||||||||||    
T  42456193 atggggtgcaaaatcgcacaattggggaactttaggggg-aaagtgcaattaagcc 42456247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 17372352 - 17372298
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaa-gtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||||||| |||||||||||||    
T  17372352 ggggtgcaaaatcgcacaattagcaaaaaatagggggaaaaggtgcaattaagcc 17372298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Original strand, 32517868 - 32517934
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaaccgga 131  Q
    ||||||| ||||||||||||||||||||| |  | | ||||| |||||||||| |||||||||||||    
T  32517868 aaaaatagattcaatagaagaaattatacttgcaggggctttgaaaaaggaaagaaagtaaaccgga 32517934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 44008017 - 44007967
Alignment:
Q  7 tgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||| |||||||||||  ||||||||||| |||||||||||||||||||    
T  44008017 tgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagcc 44007967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1928432 - 1928484
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||||||||  |||||| | ||| |||||||||    
T  1928432 atggggtgcaaaatcgcacaattggcaaaagatagggaggaaaatgcaattaa 1928484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 14015962 - 14016014
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||| |||||||| |||||  |||||  |||||||||||||||    
T  14015962 atggggtgcaaaatcgcacaattagcaaaagataggatgaaaagtgcaattaa 14016014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 17372594 - 17372645
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    |||||||||||| |||||||| | ||| |||| ||||||||||||||||||||    
T  17372594 ggggtgcaaaatcgcacaattagtaaaatata-ggggaaaagtgcaattaagc 17372645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 5e-21; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9347549 - 9347604
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  9347549 atggggtgcaaaattgcacaattggcaaactataggggggaaagtgcaattaagcc 9347604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 27172171 - 27172116
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27172171 atggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 27172116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49317807 - 49317752
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49317807 atgggatgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 49317752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 20371353 - 20371406
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20371353 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20371406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 4692431 - 4692487
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4692431 atggggtgcaaaattgcacaattggcaaactatagggggaaaaagtgcaattaagcc 4692487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6703892 - 6703948
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  6703892 atggggtgcaaaattgcacaattggcaaactataggggagaaaagtgcaattaagcc 6703948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 20480613 - 20480665
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20480613 gggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 20480665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20480223 - 20480168
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  20480223 atggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 20480168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50615619 - 50615674
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  50615619 atggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50615674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 50623447 - 50623502
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  50623447 atggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 50623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9347182 - 9347126
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  9347182 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9347126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 32163041 - 32163097
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  32163041 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 32163097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 46824276 - 46824332
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 56  Q
    |||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  46824276 atggggtgcaaaattgcacaattggcaaactataggaggaaaaagtgcaattaagcc 46824332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48105114 - 48105170
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactat-agggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  48105114 atggggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaagcc 48105170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 999523 - 999578
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||    
T  999523 atgggttgcaaaatcgcacaattggcaatctatagggggaaaagtgcaattaagcc 999578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 20371094 - 20371040
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  20371094 atggggtgcaaaattgcacaattgacaaactataggggg-aaagtgcaattaagcc 20371040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 47498355 - 47498301
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47498355 atgggatgcaaaattgcacaattggcaaactataggggg-aaagtgcaattaagcc 47498301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49318164 - 49318219
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  49318164 atgggatgcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 49318219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47498493 - 47498547
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  47498493 atggggtgcaaaaccgcacaattgacaaactatagggggaaaagtgcaattaagc 47498547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 50526470 - 50526524
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaag 54  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  50526470 atggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaag 50526524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50430079 - 50430132
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  50430079 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 50430132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 999167 - 999115
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||    
T  999167 atgggatgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 999115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13918502 - 13918446
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||    
T  13918502 atggggtgcaaaatcgcacaattggcaaactataggaggaaaaagtgcaattaagcc 13918446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 19007783 - 19007735
Alignment:
Q  8 gcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  19007783 gcaaaatcgcacaattggcaaactataggggggaaagtgcaattaagcc 19007735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 21687081 - 21687025
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||    
T  21687081 atggggtgcaaaattacacaattgacaaactataggggggaaaagtgcaattaagcc 21687025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26814750 - 26814694
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  26814750 atggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 26814694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 28633776 - 28633720
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactat-agggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| | |||||||||||||||| |||||||||||||||||||||||    
T  28633776 atggggtgcaaaatcgtacaattggcaaactataagggggaaaagtgcaattaagcc 28633720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 13918869 - 13918920
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagc 55  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  13918869 ggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagc 13918920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 3 - 54
Target Start/End: Original strand, 17518602 - 17518653
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaag 54  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||    
T  17518602 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaag 17518653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 13589659 - 13589712
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||||||||||||||||||||    
T  13589659 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 13589712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 28634155 - 28634208
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||||||||||||    
T  28634155 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 28634208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 42611237 - 42611188
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactat-agggggaaaagtgcaattaa 53  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  42611237 ggtgcaaaatcgcacaattggcaaactataagggggaaaagtgcaattaa 42611188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 46823899 - 46823846
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||| ||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  46823899 atggagtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 46823846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 48104734 - 48104681
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  48104734 atggggtgcaaaatcgcacaattgccaaactataggggggaaaagtgcaattaa 48104681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8108991 - 8109047
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  8108991 atggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 8109047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 19008748 - 19008804
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||  |||||||| ||||||||||||||||||||||    
T  19008748 atggggtgcaaaatcgcacaattgcgaaactataggggggaaaagtgcaattaagcc 19008804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26815117 - 26815173
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||  |||||||| ||||||||||||||||||||||    
T  26815117 atggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcc 26815173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39691998 - 39692054
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||| |||| ||||||||||||||||||||||    
T  39691998 atggggtgcaaaatcgcacaattgacaaaatataggggggaaaagtgcaattaagcc 39692054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44911081 - 44911025
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||| |||| ||||| ||||||||||||||||    
T  44911081 atggggtgcaaaatcgcacaattggcaaaatatagggggggaaagtgcaattaagcc 44911025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48190827 - 48190771
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  48190827 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 48190771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 49284465 - 49284409
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  49284465 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 49284409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 21687473 - 21687520
Alignment:
Q  9 caaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||| |||||||||||||| ||||||||||||||||| ||||||||    
T  21687473 caaaatcgcacaattggcaaattatagggggaaaagtgctattaagcc 21687520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 32162785 - 32162750
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagg 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  32162785 atggggtgcaaaattgcacaattggcaaactatagg 32162750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 43
Target Start/End: Original strand, 44911438 - 44911477
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaa 43  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  44911438 gggtgcaaaatcgcacaattggcaaactatagggggaaaa 44911477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 49318441 - 49318496
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| |||||||||  ||||||||||||||||| ||||||||||||    
T  49318441 atgggatgcaaaatcgcacaattgataaactatagggggaaaaatgcaattaagcc 49318496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 47955360 - 47955306
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  47955360 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 47955306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 1176766 - 1176717
Alignment:
Q  7 tgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||| |||||||| ||||| ||||||||| ||||||||||||||||    
T  1176766 tgcaaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 1176717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 33569646 - 33569719
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaaccggaggagagg 138  Q
    ||||||| ||||||||||||||||||||| |  | | ||||| |||||||||| ||||||||||||| ||||||    
T  33569646 aaaaatagattcaatagaagaaattatacttgcaggggctttgaaaaaggaaagaaagtaaaccggaagagagg 33569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 42611616 - 42611665
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaa 53  Q
    |||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  42611616 ggtgcaaaatcgcacaattgacaaactataggggagaaaagtgcaattaa 42611665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 50615289 - 50615240
Alignment:
Q  8 gcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  50615289 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 50615240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 50623117 - 50623068
Alignment:
Q  8 gcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  50623117 gcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 50623068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 6703512 - 6703460
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaa-gtgcaattaagcc 56  Q
    |||||||||| |||||||||| |||||||||| |||||| |||||||||||||    
T  6703512 ggtgcaaaatcgcacaattggtaaactataggaggaaaaagtgcaattaagcc 6703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 27172539 - 27172595
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| |||||||||||||| || | ||||||||||||||||||||||    
T  27172539 atgggatgcaaaatcgcacaattggcaaagtacaggggggaaaagtgcaattaagcc 27172595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 48191353 - 48191409
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||| |||||||||  ||||||| ||||||||||||||||||    
T  48191353 atggggtgcaaaatcgcaccattggcaaaagataggggtgaaaagtgcaattaagcc 48191409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 1176890 - 1176839
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaa 53  Q
    |||||||||||||||||||||| ||||  |||||||| ||||||||||||||    
T  1176890 ggggtgcaaaattgcacaattgacaaaagatagggggtaaaagtgcaattaa 1176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 127
Target Start/End: Original strand, 22159027 - 22159089
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaac 127  Q
    ||||||| ||||||||||| |||||||||||  | | ||||| ||||||||||||||||||||    
T  22159027 aaaaatagattcaatagaaaaaattatacatgcatgggctttgaaaaaggaaataaagtaaac 22159089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 22149455 - 22149403
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||  ||||  |||||||||||||||||||||||||    
T  22149455 ggggtgcaaaatcgcacaattaccaaag-atagggggaaaagtgcaattaagcc 22149403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 39690847 - 39690794
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    ||||||||||| ||||||||||| || ||||||||| |||||||||| ||||||    
T  39690847 gggtgcaaaatcgcacaattggccaaatatagggggaaaaagtgcaactaagcc 39690794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 41083211 - 41083264
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||| |  ||||  |||||||||||||||||||||||||    
T  41083211 ggggtgcaaaatcgcacaactaacaaaagatagggggaaaagtgcaattaagcc 41083264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 50949213 - 50949164
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaa 53  Q
    |||||||||| |||||||||||| |||||||| ||||||||| |||||||    
T  50949213 ggtgcaaaatcgcacaattggcagactataggagggaaaagtacaattaa 50949164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6002293 - 6002237
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    ||||||||||||||  |||||||| ||||  ||||||| ||||||||||||||||||    
T  6002293 atggggtgcaaaatcacacaattgacaaaagataggggtgaaaagtgcaattaagcc 6002237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 50; Significance: 8e-20; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 50507 - 50560
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50507 ggggtgcaaaatcgcacaattggcaaactatagggggaaaagtgcaattaagcc 50560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 50129 - 50075
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  50129 atggggtgcaaaattgcacaattgacaaactataggggg-aaagtgcaattaagcc 50075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 761 - 816
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  761 atggggtgcaaaatcgcacaattggcaaactataggggaaaaagtgcaattaagcc 816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 386 - 330
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  386 atgggatgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13744231 - 13744286
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  13744231 atggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 13744286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 48359375 - 48359320
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  48359375 atggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaagcc 48359320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9035291 - 9035347
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  9035291 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 9035347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 10533090 - 10533034
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  10533090 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 10533034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 22740589 - 22740641
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  22740589 atggggtgcaaaatcgcacaattgacaaactatagggggaaaagtgcaattaa 22740641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37888889 - 37888833
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  37888889 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37888833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37889257 - 37889313
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  37889257 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37889313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37972394 - 37972450
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  37972394 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37972450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3204723 - 3204669
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  3204723 atggggtgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaagcc 3204669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 18864404 - 18864455
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  18864404 ggtgcaaaatcgcacaattggcaaactatagggggaaaagtacaattaagcc 18864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 42419029 - 42419079
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  42419029 ggggtgcaaaaacgcacaattggcaaactatagggggaaaagtgcaattaa 42419079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 20418944 - 20418891
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  20418944 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 20418891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17157023 - 17156967
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  17157023 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 17156967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20419322 - 20419378
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  20419322 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 20419378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22740212 - 22740156
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  22740212 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 22740156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 29292978 - 29292922
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  29292978 atgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 29292922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36527439 - 36527387
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  36527439 atggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaa 36527387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37972016 - 37971960
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||    
T  37972016 atggggtgcaaaatcgcacaattggcaaactacaggggagaaaagtgcaattaagcc 37971960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 3205093 - 3205147
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  3205093 ggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 3205147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18864023 - 18863970
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||||||||||||    
T  18864023 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaa 18863970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 8953889 - 8953941
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    |||||||||||||||||||||  ||||  ||||||||||||||||||||||||    
T  8953889 ggggtgcaaaattgcacaattaacaaaagatagggggaaaagtgcaattaagc 8953941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13741613 - 13741557
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||| ||||||||| |||||||| ||||||||||||    
T  13741613 atggggtgcaaaatcgcacaattggtaaactataggggggaaaaatgcaattaagcc 13741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 16198975 - 16199031
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactat-agggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||| | ||| |||||||||||||||||    
T  16198975 atggggtgcaaaatcgcacaattggcaaactataatgggaaaaagtgcaattaagcc 16199031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 23686473 - 23686421
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||| |||||| |||||  |||||||||||||||||||||||||    
T  23686473 gggtgcaaaattgtacaattagcaaaagatagggggaaaagtgcaattaagcc 23686421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29293344 - 29293400
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  29293344 atggagtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 29293400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44599545 - 44599489
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  44599545 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44599489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 44600133 - 44600189
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  44600133 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 44600189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 48359660 - 48359707
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaatta 52  Q
    |||||||||| |||||||||| |||||||||||| |||||||||||||    
T  48359660 ggtgcaaaatcgcacaattggtaaactataggggaaaaagtgcaatta 48359707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 3687656 - 3687710
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  3687656 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 3687710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 9034921 - 9034867
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||| ||| |||||||||||||| |||| ||||||||||||||||||||||    
T  9034921 ggggtgcagaatcgcacaattggcaaattataggggggaaaagtgcaattaagcc 9034867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 9412325 - 9412379
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  9412325 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 9412379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13863369 - 13863313
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||||||    
T  13863369 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 13863313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 38826915 - 38826967
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||    
T  38826915 ggtgcaaaatcgcacaattgacaaactataggggggaaaaatgcaattaagcc 38826967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 27096094 - 27096047
Alignment:
Q  9 caaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||| |||||||| ||||| ||||||||| ||||||||||||||||    
T  27096094 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 27096047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 56
Target Start/End: Original strand, 27182209 - 27182256
Alignment:
Q  9 caaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||| |||||||| ||||| ||||||||| ||||||||||||||||    
T  27182209 caaaatcgcacaattagcaaaatataggggggaaagtgcaattaagcc 27182256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 13772901 - 13772955
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  13772901 ggggtgcaaaatcgcacaattagcaaatgataggggggaaaagtgcaattaagcc 13772955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18925320 - 18925373
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    |||||||||||||| |||||||| ||||| |||| | ||||||||||||||||||    
T  18925320 atggggtgcaaaatcgcacaattagcaaaatata-gaggaaaagtgcaattaagc 18925373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 6908485 - 6908534
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    ||||||||||| |||||||| |||||  |||||||| |||||||||||||    
T  6908485 gggtgcaaaatcgcacaattagcaaaaaataggggggaaagtgcaattaa 6908534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 6908265 - 6908213
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||| ||||||||  |||   |||||||||||||||||||||||||    
T  6908265 gggtgcaaaatcgcacaattaacaatagatagggggaaaagtgcaattaagcc 6908213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8643764 - 8643820
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||| |||  ||||||  ||||||||||||||||||    
T  8643764 atggggtgcaaaatcgcacaattggtaaaagatagggatgaaaagtgcaattaagcc 8643820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13772697 - 13772641
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  ||||||| |||||  |||||| |||||||||||||||||||    
T  13772697 atggggtgcaaaatcacacaattagcaaaagatagggaggaaaagtgcaattaagcc 13772641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13863955 - 13864010
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| | ||||||||||||||  ||||||| ||||||||||||||||||    
T  13863955 atggggtgcaaa-tcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13864010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 18925114 - 18925062
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    ||||||||||||||||||| |||||  ||||||  ||||||||||||||||||    
T  18925114 ggtgcaaaattgcacaattagcaaaagatagggaagaaaagtgcaattaagcc 18925062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 56
Target Start/End: Complemental strand, 35080012 - 35079960
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||   ||||||| |||||  |||||||||||||||||||||||||    
T  35080012 gggtgcaaaaccccacaattagcaaaagatagggggaaaagtgcaattaagcc 35079960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36527796 - 36527852
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| ||| ||||||||||||||| | ||||||| ||||||||||||    
T  36527796 atgggatgcaaaatcgcataattggcaaactatatgagggaaaaatgcaattaagcc 36527852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 56
Target Start/End: Complemental strand, 42418639 - 42418591
Alignment:
Q  9 caaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||| |||||||| ||||||||||| ||||||||||| |||||||||    
T  42418639 caaaatcgcacaattagcaaactataggggggaaaagtgaaattaagcc 42418591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 38693 - 38749
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  38693 atggggtgcaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 38749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 185272 - 185328
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||    
T  185272 atggggtgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaagcc 185328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 184895 - 184840
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagc 55  Q
    |||||||||||||||||||| ||| |||||||||| || |||||||||||||||||    
T  184895 atggggtgcaaaattgcacagttgacaaactatagaggagaaaagtgcaattaagc 184840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 8e-17; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17851034 - 17850978
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  17851034 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 17850978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37720260 - 37720204
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  37720260 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37720204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 5378715 - 5378661
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  5378715 ggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 5378661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16911267 - 16911321
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    |||||||||||||| |||||||||||||||||||||||  |||||||||||||||    
T  16911267 atggggtgcaaaatcgcacaattggcaaactataggggcgaaagtgcaattaagc 16911321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18750124 - 18750178
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  18750124 atggggtgcaaaatcgcacaattgacaaactatagggggagaagtgcaattaagc 18750178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 8851204 - 8851151
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  8851204 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaa 8851151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 26692818 - 26692871
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  26692818 atggggtgcaaaatcgcacaattggcaaactatagaggggaaaagtgcaattaa 26692871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7664671 - 7664727
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  7664671 atggggtgcaaaatcgcacaattgacaaactatagggaggaaaagtgcaattaagcc 7664727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 8851580 - 8851636
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  8851580 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 8851636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 16910883 - 16910827
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  16910883 atggggtgcaaaatcgcacaattggcaaactacatgggggaaaagtgcaattaagcc 16910827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 41790546 - 41790494
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  41790546 atggggtgcaaaatcgcacaattgacaaactatagggggaaaaatgcaattaa 41790494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7980001 - 7980056
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| ||||||||||| || |||||||||||||||||    
T  7980001 atggggtgcaaaatcgcacaattagcaaactatagaggaaaaagtgcaattaagcc 7980056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 5379959 - 5380013
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||||| |||||||| ||||||||||||||||||||||    
T  5379959 ggggtgcaaaatcgcacaattggtaaactataggggggaaaagtgcaattaagcc 5380013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 6325349 - 6325399
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaag 54  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||    
T  6325349 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaag 6325399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 19141499 - 19141446
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaag 54  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  19141499 atggggtgcaaaat-gcacaattggcaaactatagggggaaaaagtgcaattaag 19141446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 37326536 - 37326601
Alignment:
Q  74 attcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaaccggaggagagg 138  Q
    |||||||||||||||||||||||  | ||||||| |||||||||| ||||||||||||| ||||||    
T  37326536 attcaatagaagaaattatacatgcatgagctttgaaaaaggaaagaaagtaaaccggaagagagg 37326601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2639480 - 2639536
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  2639480 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 2639536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7664304 - 7664248
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||  ||||||||| |||||||||||||||||||||    
T  7664304 atggggtgcaaaatcgcacaattgataaactataggggggaaaagtgcaattaagcc 7664248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 18296691 - 18296747
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  18296691 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 18296747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19141847 - 19141898
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||||||||||    
T  19141847 atgggatgcaaaatcgcacaattggcaaactataggggg-aaagtgcaattaa 19141898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 26841643 - 26841587
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  26841643 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 26841587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 41790910 - 41790966
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||| ||||||| |||||||||||||| |||| ||||||||||||||||||||||    
T  41790910 atggggggcaaaatcgcacaattggcaaaatataggggggaaaagtgcaattaagcc 41790966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 20347464 - 20347518
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  20347464 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 20347518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 30190977 - 30190923
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  30190977 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 30190923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 32673143 - 32673193
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||| ||||||||||||||  ||||||| ||||||||||||||    
T  32673143 ggggtgcaaaatcgcacaattggcaaaagataggggaaaaagtgcaattaa 32673193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 5663992 - 5664065
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaaccggaggagagg 138  Q
    ||||||| ||||||||||||||||||||| |  | | ||||| |||||||||| ||||||||||||| ||||||    
T  5663992 aaaaatagattcaatagaagaaattatacctgcaggggctttgaaaaaggaaagaaagtaaaccggaagagagg 5664065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6324973 - 6324924
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaa 49  Q
    ||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  6324973 atgggatgcaaaatcgcacaattggcaaactataggggggaaaagtgcaa 6324924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 138
Target Start/End: Complemental strand, 26403727 - 26403654
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaaccggaggagagg 138  Q
    ||||||| ||||||||||||||||||||||| || |||| |  |||||||||| ||||||||| ||| ||||||    
T  26403727 aaaaatatattcaatagaagaaattatacatgtaggagcctggaaaaaggaaagaaagtaaactggaagagagg 26403654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26692452 - 26692399
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| |||||||||| ||| ||||||||||||||    
T  26692452 atggggtgcaaaatcgcacaattgacaaactatagagggaaaaagtgcaattaa 26692399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 38490845 - 38490894
Alignment:
Q  7 tgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||| |||||||||| ||||||||||| | ||||||||||||||||    
T  38490845 tgcaaaatcgcacaattggtaaactatagggaggaaagtgcaattaagcc 38490894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2638876 - 2638820
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||||||    
T  2638876 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 2638820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24832387 - 24832331
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||  ||| ||||||||||||||||||||||    
T  24832387 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 24832331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 26842236 - 26842292
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| |||||||||| |||||||    
T  26842236 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcacttaagcc 26842292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 5793497 - 5793450
Alignment:
Q  7 tgcaaaattgcacaattggcaaacta-tagggggaaaagtgcaattaa 53  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||    
T  5793497 tgcaaaatcgcacaattggcaaactacaagggggaaaagtgcaattaa 5793450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 6171207 - 6171156
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||  ||||  |||||||||||||||||||||||||    
T  6171207 ggtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 6171156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7979621 - 7979567
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| |||||||||  |||||||||||||| |||||    
T  7979621 atggggtgcaaaatcgcacaattgtcaaactata-agggaaaagtgcaataaagcc 7979567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18296132 - 18296077
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagc 55  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||| |||||||||    
T  18296132 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaagc 18296077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 6171456 - 6171510
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    ||||||||||||  |||||||||||||  ||||||| ||||||||||||||||||    
T  6171456 ggggtgcaaaatcccacaattggcaaaagataggggggaaaagtgcaattaagcc 6171510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 11883677 - 11883623
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||| |||||||||||||||||    
T  11883677 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 11883926 - 11883980
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  11883926 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 11883980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 7591257 - 7591204
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||| |||||||    
T  7591257 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtacaattaa 7591204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 43495609 - 43495658
Alignment:
Q  7 tgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||| |||||||| ||||| |||||| || ||||||||||||||||    
T  43495609 tgcaaaatcgcacaattagcaaaatataggtgggaaagtgcaattaagcc 43495658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 19676 - 19621
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||    
T  19676 atggggtgcaaaatcgcacaattggcaaactatatggggaaaattgcaattaagcc 19621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20041 - 20097
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||| ||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  20041 atggggggcaaaatcgcacaattgacaaactataagggggaaaagtgcaattaagcc 20097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 3e-16; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 16169225 - 16169174
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  16169225 ggtgcaaaattgcacaattggcaaactataggatgaaaagtgcaattaagcc 16169174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 25438848 - 25438794
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaag 54  Q
    |||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  25438848 atggggtgcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaag 25438794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 24473399 - 24473343
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    ||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||    
T  24473399 atggggtgcaaaatcacacaattggcaaactatagggggaaaaagtgcaattaagcc 24473343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 24473766 - 24473822
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  24473766 atggggtgcaaaatcgcacaattggcaaactatagggatgaaaagtgcaattaagcc 24473822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25439124 - 25439176
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  25439124 atggggtgcaaaatcgcacaattgacaaactataggggaaaaagtgcaattaa 25439176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 34498553 - 34498609
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||||||| ||||||||||||||||||||||    
T  34498553 atggggtgcaaaatcgcacaatttgcaaactataggggggaaaagtgcaattaagcc 34498609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37396764 - 37396708
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  37396764 atggggtgcaaaatcgcacaatcggcaaactataggggggaaaagtgcaattaagcc 37396708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 37397143 - 37397199
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  37397143 atggggggcaaaatcgcacaattggcaaactataggggggaaaagtgcaattaagcc 37397199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 41662573 - 41662521
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||    
T  41662573 ggtgcaaaatcgcacaattggcaaactatatgggggaaaagtgcaattaagcc 41662521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13936778 - 13936723
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||| |||  |||||||||||||||||||||||||    
T  13936778 atggggtgcaaaatcgcacaattggtaaaagatagggggaaaagtgcaattaagcc 13936723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34498178 - 34498125
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||||||    
T  34498178 atggggtgcaaaatcgcacaattgacaaactatagggggaaaaagtgcaattaa 34498125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2856582 - 2856526
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||    
T  2856582 atggggtgcaaaatcgcacaattggcaaactatagggaggaaaattacaattaagcc 2856526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6199094 - 6199150
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| ||||||||||||||||||||||  ||||||||||||||||||    
T  6199094 atgggatgcaaaatcgcacaattggcaaactatagggaagaaaagtgcaattaagcc 6199150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9623558 - 9623502
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||| | | |||||||||||||||||    
T  9623558 atggggtgcaaaatcgcacaattggcaaactatagtgagaaaaagtgcaattaagcc 9623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9823359 - 9823415
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  9823359 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 9823415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 20861636 - 20861692
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||    
T  20861636 atggggtgcaaaatcgcacaattggcagactatagggggaaaaaatgcaattaagcc 20861692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 39724046 - 39724102
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  39724046 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 39724102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 9623880 - 9623935
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  ||| ||||||||||||||||  ||||||||||||||||||    
T  9623880 atggggtgcaaaatcacacgattggcaaactataggatgaaaagtgcaattaagcc 9623935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 43162285 - 43162234
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||  |||| ||||||||||||||||||||||||||    
T  43162285 ggtgcaaaatcgcacaattaacaaaatatagggggaaaagtgcaattaagcc 43162234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 41662403 - 41662457
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  41662403 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 41662457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13027279 - 13027332
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaa 53  Q
    |||||||||||||| ||||||||||||||  ||||||| |||||||||||||||    
T  13027279 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaa 13027332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15444645 - 15444698
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaa 53  Q
    |||||||||||||| |||||||||| ||| ||||||||| ||||||||||||||    
T  15444645 atggggtgcaaaatcgcacaattggtaaattatagggggaaaaagtgcaattaa 15444698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 42451994 - 42451929
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaaccgg 130  Q
    ||||||| ||||||||||||||||||||| |  | ||||||| |||||||||| ||||||||||||    
T  42451994 aaaaatagattcaatagaagaaattatacctgcaggagctttgaaaaaggaaagaaagtaaaccgg 42451929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 765788 - 765736
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaag 54  Q
    |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  765788 ggggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaag 765736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 12281176 - 12281124
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||||||||  ||| ||||||||||||||||||||||    
T  12281176 ggtgcaaaatcgcacaattggcaaaagataggggggaaaagtgcaattaagcc 12281124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 13026687 - 13026635
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  13026687 ggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 13026635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 17431339 - 17431287
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||| ||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  17431339 ggtgaaaaatcgcacaattgacaaactatatgggggaaaagtgcaattaagcc 17431287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22851446 - 22851390
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||  ||||||| ||||||||||||||||||    
T  22851446 atggggtgcaaaatcgcacaattgacaaaagataggggtgaaaagtgcaattaagcc 22851390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 37752140 - 37752084
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||  ||| ||||||||||||||||||||||    
T  37752140 atggggtgcaaaatcgcacaattagcaaaacataggggggaaaagtgcaattaagcc 37752084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 68 - 138
Target Start/End: Original strand, 31462186 - 31462257
Alignment:
Q  68 aaataaattcaatagaagaaattatacatatag-agctttcaaaaaggaaataaagtaaaccggaggagagg 138  Q
    ||||| |||||||||||||||||||||||  || |||||| |||||| ||| |||||| |||||| ||||||    
T  31462186 aaatagattcaatagaagaaattatacatgcagaagctttgaaaaagtaaagaaagtagaccggaagagagg 31462257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 54
Target Start/End: Complemental strand, 33726743 - 33726696
Alignment:
Q  8 gcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaag 54  Q
    ||||||| |||||||||| ||||||||||||| |||||||||||||||    
T  33726743 gcaaaatcgcacaattggtaaactatagggggaaaaagtgcaattaag 33726696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Complemental strand, 9465653 - 9465607
Alignment:
Q  10 aaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||| ||||  ||||| |||||||||||||||||||    
T  9465653 aaaattgcacaattgacaaaagataggaggaaaagtgcaattaagcc 9465607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 15156185 - 15156239
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||| ||||  ||||||| ||||||||||||||||||    
T  15156185 ggggtgcaaaatcgcacaattgacaaaagataggggggaaaagtgcaattaagcc 15156239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 16169611 - 16169661
Alignment:
Q  7 tgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaagcc 56  Q
    |||||| |||||||||||  ||||||||||| |||||||||||||||||||    
T  16169611 tgcaaatttgcacaattgaaaaactatagggaggaaaagtgcaattaagcc 16169661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 16929242 - 16929296
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  16929242 ggggtgcaaaatcgcacaattagcaaaagataggggagaaaagtgcaattaagcc 16929296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 25720111 - 25720045
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaaccgga 131  Q
    ||||||| ||||||||||||||||||||  | || | ||||| |||||||||| |||||||||||||    
T  25720111 aaaaatagattcaatagaagaaattatatttgtaggggctttgaaaaaggaaagaaagtaaaccgga 25720045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 3463946 - 3463999
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||| || |||||||| ||||| |||||||| ||||||||||||||||||    
T  3463946 gggtgcaagatcgcacaattagcaaaatataggggggaaaagtgcaattaagcc 3463999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 10 - 54
Target Start/End: Complemental strand, 15444258 - 15444213
Alignment:
Q  10 aaaattgcacaattggcaaactatag-ggggaaaagtgcaattaag 54  Q
    ||||||| |||||||||||||||||| |||||||| ||||||||||    
T  15444258 aaaattgtacaattggcaaactatagaggggaaaaatgcaattaag 15444213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 43162539 - 43162588
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaatta 52  Q
    |||||||||||| |||| |||| ||||  |||||||||||||||||||||    
T  43162539 ggggtgcaaaatcgcacgattgacaaaagatagggggaaaagtgcaatta 43162588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 9822804 - 9822748
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||  |||  ||||||| ||||||||||||||||||    
T  9822804 atggggtgcaaaatcgcacaattgataaaagataggggtgaaaagtgcaattaagcc 9822748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 13937387 - 13937443
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| | ||||||||| ||||  ||||||| ||||||||||||||||||    
T  13937387 atggggtgcaaattcgcacaattgacaaaaaataggggggaaaagtgcaattaagcc 13937443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 23123394 - 23123338
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagg-gggaaaagtgcaattaagcc 56  Q
    |||||||| ||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  23123394 atggggtgtaaaatcgcacaattgacaaaagataggagggaaaagtgcaattaagcc 23123338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 3e-16; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 22684356 - 22684411
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  22684356 atggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagcc 22684411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 22754712 - 22754657
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||    
T  22754712 atggggtgcaaaatcacacaattggcaaactataaggggaaaagtgcaattaagcc 22754657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29074370 - 29074425
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  29074370 atggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcc 29074425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29079134 - 29079189
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  29079134 atggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcc 29079189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 29106943 - 29106998
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||||||||||||||||||| |||| |||||||||||    
T  29106943 atggggtgcaaaatcgcacaattggcaaactataggggggaaagagcaattaagcc 29106998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 7654546 - 7654602
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||    
T  7654546 atggggtgcaaaatcgcacaattgacaaactataggggggaaaagtgcaattaagcc 7654602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 10087856 - 10087912
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  10087856 atggggtgcaaaatcgcacaattggcaaactaaaggggggaaaagtgcaattaagcc 10087912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33974297 - 33974353
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||    
T  33974297 atggggtgcaaaatcgcacaattggcaaactataggggggaaaaatgcaattaagcc 33974353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 3825580 - 3825530
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    |||||||||||| |||||||| ||||| |||||||||||||||||||||||    
T  3825580 ggggtgcaaaatcgcacaattagcaaaatatagggggaaaagtgcaattaa 3825530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 10039729 - 10039676
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||||||||||||||||||||    
T  10039729 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 10039676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 13579651 - 13579704
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||| |||||| ||||||||||||||||||    
T  13579651 ggggtgcaaaatcgcacaattagcaaacgatagggagaaaagtgcaattaagcc 13579704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 32733994 - 32734047
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactataggg-ggaaaagtgcaattaa 53  Q
    ||||| |||||||| |||||||||||||||||||||| ||||||||||||||||    
T  32733994 atgggatgcaaaatcgcacaattggcaaactatagggaggaaaagtgcaattaa 32734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33829046 - 33828990
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  33829046 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33828990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 33829634 - 33829690
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||||||||||||||||    
T  33829634 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaagtgcaattaagcc 33829690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 21032032 - 21031979
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||   ||||||||||||||||||||||||    
T  21032032 ggggtgcaaaatcgcacaattagcaaaagttagggggaaaagtgcaattaagcc 21031979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 33655115 - 33655168
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||||||||| |||||  ||| ||||| |||||||||||||||    
T  33655115 ggggtgcaaaattgcacaattagcaaaagataaggggacaagtgcaattaagcc 33655168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 2354808 - 2354864
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatag-ggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||| ||||||||||||    
T  2354808 atggggtgcaaaatcgcacaattgacaaactatagacgggaaaaatgcaattaagcc 2354864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3403773 - 3403717
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactata-gggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| |||||||| |||||  ||| ||||||||||||||||||||||    
T  3403773 atggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3403717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 2354464 - 2354409
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||| |||||||| | |||||||  ||||||||||||||||| ||||||||||||    
T  2354464 atgggatgcaaaatcgtacaattgaaaaactatagggggaaaaatgcaattaagcc 2354409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 3403989 - 3404043
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  3403989 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 3404043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 403700 - 403651
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaag 54  Q
    |||||||||||||| |||||||||||||||||    ||||||||||||||    
T  403700 ggtgcaaaattgcaaaattggcaaactataggaaagaaagtgcaattaag 403651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 17738943 - 17739004
Alignment:
Q  66 aaaaataaattcaatagaagaaattatacatata-gagctttcaaaaaggaaataaagtaaa 126  Q
    ||||||| |||| |||||||||||||||||| || | ||||| |||||||||| ||||||||    
T  17738943 aaaaatagattcgatagaagaaattatacatgtaggggctttgaaaaaggaaagaaagtaaa 17739004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 30388111 - 30388062
Alignment:
Q  7 tgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||| |||||||| |||||  |||||||| ||||||||||||||||    
T  30388111 tgcaaaatcgcacaattagcaaaagataggggggaaagtgcaattaagcc 30388062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31598726 - 31598778
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    ||||| |||||||| ||||||||  ||||  ||||||||||||||||||||||    
T  31598726 atgggatgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaa 31598778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 45807 - 45860
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||||||||    
T  45807 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaagtgcaattaagcc 45860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Complemental strand, 45587 - 45537
Alignment:
Q  6 gtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||| ||||||||  ||||  |||||||||||||||||||||||||    
T  45587 gtgcaaaatcgcacaattaacaaaagatagggggaaaagtgcaattaagcc 45537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 56
Target Start/End: Original strand, 17158 - 17209
Alignment:
Q  5 ggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||||||    
T  17158 ggtgcaaaattgcacaattagcaaaagatagggggaaaagtgcaattaagcc 17209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 9959 - 9905
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||| ||||| |||||||||||||||||||||||| |||||||||||||||||    
T  9959 ggggtgaaaaatcgcacaattggcaaactatagggggaaaaagtgcaattaagcc 9905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 56
Target Start/End: Original strand, 10320 - 10371
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||| | ||||||||||||||||| |||||||||||| ||||||||    
T  10320 gggtgcaaaatcggacaattggcaaactata-ggggaaaagtgctattaagcc 10371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 6697 - 6750
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||||||||||||||||||||    
T  6697 ggggtgcaaaatcgcacaattagcaaaagatagggggaaaagtgcaattaagcc 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 6448 - 6394
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||| |||||||||||||||||    
T  6448 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 6394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 1420 - 1474
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||||||||  |||||||| |||||||||||||||||    
T  1420 ggggtgcaaaatcgcacaattggcaaaagatagggggaaaaagtgcaattaagcc 1474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 411976 - 411923
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| ||||||||| ||||  |||||||| ||||||||||||||||    
T  411976 ggggtgcaaaatcgcacaattgacaaaagatagggggtaaagtgcaattaagcc 411923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 6793 - 6849
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||||||||||||||  ||||||| ||||| ||||||||||||    
T  6793 atggggtgcaaaatcgcacaattggcaaaagataggggtgaaaaatgcaattaagcc 6849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1221 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1221
Description:

Target: scaffold1221; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1566 - 1511
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||||||||||||  |||||||||||||  |||| || |||||||||||||||||    
T  1566 atggggtgcaaaatcacacaattggcaaaagatagaggaaaaagtgcaattaagcc 1511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 55
Target Start/End: Original strand, 6877 - 6927
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagc 55  Q
    ||||||||||| ||||||||||||||  |||||||| |||||||||||||||    
T  6877 gggtgcaaaat-gcacaattggcaaaagataggggggaaagtgcaattaagc 6927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 7510 - 7455
Alignment:
Q  1 atggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||||| ||| |||| |||||  ||||||| |||||||||||||||||    
T  7510 atggggtgcaaaatcgcataattagcaaaagataggggaaaaagtgcaattaagcc 7455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 7600 - 7653
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    ||||| |||||| |||||||| |||||  ||||||| |||||||||||||||||    
T  7600 ggggtacaaaatcgcacaattagcaaaagataggggaaaaagtgcaattaagcc 7653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Original strand, 25369 - 25423
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggg-gaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  ||||||| ||||||||||||||||||    
T  25369 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 25423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 438984 - 438930
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactataggggg-aaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||||| |||||||||||||||||    
T  438984 ggggtgcaaaatcgcacaattagcaaaagataggggggaaaagtgcaattaagcc 438930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 53
Target Start/End: Complemental strand, 183416 - 183367
Alignment:
Q  4 gggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaa 53  Q
    ||||||||||| | ||||||| ||||  ||||||||||||||||||||||    
T  183416 gggtgcaaaatcgtacaattgacaaaagatagggggaaaagtgcaattaa 183367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 3 - 56
Target Start/End: Complemental strand, 205740 - 205687
Alignment:
Q  3 ggggtgcaaaattgcacaattggcaaactatagggggaaaagtgcaattaagcc 56  Q
    |||||||||||| |||||||| |||||  |||||| ||||| ||||||||||||    
T  205740 ggggtgcaaaatcgcacaattagcaaaagatagggagaaaaatgcaattaagcc 205687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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