View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10038_low_4 (Length: 492)

Name: NF10038_low_4
Description: NF10038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10038_low_4
NF10038_low_4
[»] chr8 (58 HSPs)
chr8 (17-481)||(21144442-21144911)
chr8 (283-431)||(21148144-21148292)
chr8 (284-435)||(10108388-10108539)
chr8 (283-432)||(2583341-2583490)
chr8 (283-435)||(5554887-5555039)
chr8 (285-432)||(26136706-26136853)
chr8 (285-435)||(14820313-14820462)
chr8 (310-435)||(10108605-10108730)
chr8 (310-435)||(21147954-21148080)
chr8 (310-435)||(14820529-14820654)
chr8 (283-435)||(30789715-30789867)
chr8 (283-434)||(17623095-17623245)
chr8 (310-435)||(7689758-7689883)
chr8 (283-435)||(42605773-42605923)
chr8 (307-435)||(5555101-5555229)
chr8 (283-391)||(22494447-22494554)
chr8 (283-432)||(14767715-14767861)
chr8 (310-435)||(30789526-30789650)
chr8 (310-435)||(42113003-42113127)
chr8 (283-435)||(7689542-7689693)
chr8 (310-396)||(14767564-14767650)
chr8 (283-431)||(43481522-43481671)
chr8 (357-437)||(38726703-38726783)
chr8 (310-428)||(26532807-26532926)
chr8 (339-437)||(40486645-40486742)
chr8 (310-435)||(43851683-43851807)
chr8 (315-435)||(10171383-10171503)
chr8 (154-264)||(10171403-10171516)
chr8 (283-435)||(42113192-42113341)
chr8 (150-275)||(21147937-21148066)
chr8 (378-429)||(22848549-22848600)
chr8 (176-264)||(43851692-43851782)
chr8 (150-275)||(14820543-14820671)
chr8 (310-391)||(26136920-26137001)
chr8 (216-273)||(26136936-26136993)
chr8 (176-275)||(42113012-42113113)
chr8 (311-435)||(42605989-42606113)
chr8 (176-267)||(10108397-10108491)
chr8 (150-275)||(10108619-10108747)
chr8 (176-267)||(14820322-14820415)
chr8 (216-257)||(30789774-30789815)
chr8 (357-437)||(35367426-35367507)
chr8 (219-275)||(7689772-7689828)
chr8 (176-207)||(5554896-5554927)
chr8 (216-275)||(14767577-14767636)
chr8 (228-275)||(17622969-17623016)
chr8 (357-435)||(18044111-18044187)
chr8 (176-273)||(30789535-30789634)
chr8 (178-257)||(22494418-22494496)
chr8 (150-204)||(40486630-40486684)
chr8 (216-257)||(5555136-5555177)
chr8 (313-409)||(17622934-17623027)
chr8 (313-437)||(20875714-20875836)
chr8 (150-203)||(20877069-20877122)
chr8 (216-273)||(22494635-22494692)
chr8 (150-207)||(22848566-22848623)
chr8 (150-207)||(40487734-40487791)
chr8 (283-327)||(43851872-43851916)
[»] chr1 (73 HSPs)
chr1 (282-430)||(16294154-16294302)
chr1 (283-431)||(34749313-34749461)
chr1 (283-434)||(4907170-4907321)
chr1 (283-435)||(8292822-8292974)
chr1 (283-435)||(33628898-33629050)
chr1 (283-430)||(39711096-39711242)
chr1 (283-430)||(43539370-43539517)
chr1 (283-435)||(17606322-17606478)
chr1 (283-435)||(18462304-18462455)
chr1 (283-435)||(24467647-24467798)
chr1 (283-435)||(30299250-30299401)
chr1 (283-437)||(42510222-42510377)
chr1 (275-399)||(215112-215236)
chr1 (310-435)||(17606543-17606666)
chr1 (312-437)||(17501967-17502091)
chr1 (283-435)||(39970853-39971006)
chr1 (310-434)||(18462519-18462643)
chr1 (310-430)||(24467862-24467982)
chr1 (310-435)||(43539582-43539707)
chr1 (310-434)||(42510034-42510157)
chr1 (283-435)||(39826258-39826406)
chr1 (283-430)||(48071984-48072131)
chr1 (310-435)||(8293042-8293168)
chr1 (283-349)||(20995773-20995839)
chr1 (310-412)||(39826091-39826193)
chr1 (176-267)||(18462313-18462406)
chr1 (310-435)||(52058029-52058154)
chr1 (216-276)||(18462532-18462592)
chr1 (310-430)||(48072196-48072316)
chr1 (275-382)||(13229803-13229910)
chr1 (310-409)||(20995903-20996001)
chr1 (216-275)||(24467876-24467935)
chr1 (311-430)||(29696794-29696912)
chr1 (283-435)||(52058219-52058368)
chr1 (150-275)||(17606557-17606683)
chr1 (310-431)||(30299466-30299587)
chr1 (216-273)||(30299482-30299539)
chr1 (310-435)||(39711307-39711432)
chr1 (283-435)||(29696583-29696734)
chr1 (310-409)||(4907006-4907105)
chr1 (310-435)||(39970663-39970789)
chr1 (310-434)||(34749157-34749280)
chr1 (150-268)||(42510016-42510136)
chr1 (216-275)||(4907032-4907091)
chr1 (216-267)||(4907219-4907270)
chr1 (216-267)||(24467698-24467749)
chr1 (176-273)||(29696809-29696908)
chr1 (216-267)||(30299301-30299352)
chr1 (150-257)||(33628957-33629067)
chr1 (357-435)||(33628708-33628786)
chr1 (372-437)||(16294065-16294129)
chr1 (216-273)||(39826120-39826177)
chr1 (216-257)||(39826313-39826354)
chr1 (216-257)||(39970912-39970953)
chr1 (150-207)||(42510335-42510392)
chr1 (223-268)||(52058088-52058133)
chr1 (216-264)||(8293067-8293115)
chr1 (313-437)||(17500785-17500909)
chr1 (317-435)||(18342261-18342377)
chr1 (176-207)||(20995725-20995756)
chr1 (176-207)||(39711100-39711131)
chr1 (216-275)||(39970716-39970775)
chr1 (216-267)||(43539417-43539468)
chr1 (216-267)||(52058265-52058316)
chr1 (162-207)||(17500782-17500827)
chr1 (346-435)||(30252169-30252258)
chr1 (216-273)||(34749207-34749264)
chr1 (216-273)||(39711323-39711380)
chr1 (216-264)||(30252158-30252206)
chr1 (283-327)||(30780272-30780316)
chr1 (216-264)||(33628760-33628808)
chr1 (216-256)||(34749373-34749413)
chr1 (224-268)||(42510166-42510210)
[»] chr2 (74 HSPs)
chr2 (283-437)||(33290065-33290219)
chr2 (275-435)||(26135835-26135995)
chr2 (283-437)||(13284616-13284775)
chr2 (283-435)||(17463110-17463261)
chr2 (283-409)||(42670927-42671053)
chr2 (283-435)||(26560762-26560915)
chr2 (283-432)||(22263399-22263550)
chr2 (283-409)||(23854874-23854999)
chr2 (310-435)||(26560574-26560697)
chr2 (312-437)||(12418960-12419084)
chr2 (312-437)||(12431020-12431144)
chr2 (283-435)||(26236145-26236297)
chr2 (310-435)||(26236330-26236454)
chr2 (283-435)||(17850794-17850946)
chr2 (283-435)||(39878120-39878272)
chr2 (310-427)||(20498980-20499097)
chr2 (312-437)||(30959909-30960033)
chr2 (283-383)||(23806022-23806122)
chr2 (310-433)||(17463326-17463449)
chr2 (310-435)||(15106302-15106425)
chr2 (310-435)||(17850605-17850729)
chr2 (310-435)||(19251705-19251829)
chr2 (310-435)||(23806187-23806312)
chr2 (310-435)||(30390477-30390602)
chr2 (283-435)||(15106085-15106237)
chr2 (283-435)||(19251489-19251640)
chr2 (150-207)||(13284733-13284790)
chr2 (310-391)||(22263253-22263334)
chr2 (216-273)||(26236346-26236403)
chr2 (321-435)||(42670735-42670851)
chr2 (357-409)||(13254541-13254593)
chr2 (313-437)||(21481017-21481141)
chr2 (283-430)||(20498770-20498915)
chr2 (161-275)||(15106316-15106431)
chr2 (361-435)||(23854706-23854780)
chr2 (150-276)||(33290297-33290424)
chr2 (150-207)||(33290050-33290107)
chr2 (310-437)||(33290284-33290409)
chr2 (216-267)||(15106137-15106188)
chr2 (216-267)||(17850843-17850894)
chr2 (150-267)||(19251472-19251591)
chr2 (216-267)||(23806022-23806073)
chr2 (216-275)||(23806201-23806260)
chr2 (150-203)||(12419046-12419099)
chr2 (150-203)||(12431106-12431159)
chr2 (176-267)||(17463119-17463212)
chr2 (216-273)||(30390529-30390586)
chr2 (150-207)||(30958685-30958742)
chr2 (150-207)||(30959991-30960048)
chr2 (216-276)||(13284656-13284716)
chr2 (216-268)||(20499001-20499053)
chr2 (283-319)||(30390635-30390671)
chr2 (176-207)||(17463411-17463442)
chr2 (216-275)||(17850656-17850715)
chr2 (216-275)||(22263261-22263320)
chr2 (216-267)||(23854923-23854974)
chr2 (216-267)||(26135887-26135938)
chr2 (361-435)||(26136103-26136177)
chr2 (216-275)||(26560624-26560683)
chr2 (176-207)||(39878129-39878160)
chr2 (216-262)||(21482142-21482188)
chr2 (339-437)||(21482144-21482241)
chr2 (217-267)||(22263448-22263498)
chr2 (357-411)||(34548707-34548760)
chr2 (227-268)||(13254692-13254733)
chr2 (150-207)||(23854689-23854746)
chr2 (314-391)||(36359105-36359182)
chr2 (310-375)||(39878337-39878402)
chr2 (150-207)||(42670718-42670775)
chr2 (316-435)||(13254677-13254796)
chr2 (219-267)||(26236200-26236248)
chr2 (313-437)||(30958700-30958823)
chr2 (361-409)||(34548618-34548665)
chr2 (315-399)||(44098862-44098946)
[»] chr5 (71 HSPs)
chr5 (283-435)||(29444824-29444976)
chr5 (283-434)||(7126125-7126276)
chr5 (283-435)||(27159165-27159314)
chr5 (283-435)||(14143920-14144071)
chr5 (283-435)||(14411715-14411867)
chr5 (283-435)||(17762301-17762452)
chr5 (283-409)||(993954-994080)
chr5 (284-435)||(18336485-18336637)
chr5 (275-435)||(24837369-24837529)
chr5 (310-431)||(14144136-14144257)
chr5 (310-435)||(23979136-23979261)
chr5 (283-435)||(31799848-31799999)
chr5 (284-435)||(24074321-24074472)
chr5 (310-409)||(24074537-24074636)
chr5 (310-432)||(7125939-7126060)
chr5 (283-410)||(6817329-6817456)
chr5 (289-435)||(41001567-41001712)
chr5 (283-435)||(20709420-20709571)
chr5 (289-431)||(24650913-24651055)
chr5 (310-435)||(6817141-6817265)
chr5 (314-435)||(24837187-24837308)
chr5 (310-435)||(29445041-29445165)
chr5 (310-428)||(14411901-14412018)
chr5 (317-435)||(18336698-18336815)
chr5 (317-435)||(31799658-31799776)
chr5 (283-427)||(4919198-4919341)
chr5 (176-257)||(27159224-27159305)
chr5 (283-430)||(22571285-22571432)
chr5 (176-275)||(23979150-23979252)
chr5 (314-437)||(41424532-41424655)
chr5 (314-391)||(20959330-20959407)
chr5 (176-273)||(993777-993874)
chr5 (176-257)||(41001383-41001464)
chr5 (310-431)||(993772-993890)
chr5 (324-435)||(22571095-22571206)
chr5 (310-409)||(30512332-30512430)
chr5 (310-409)||(30552672-30552770)
chr5 (310-435)||(41001374-41001496)
chr5 (310-396)||(20709269-20709355)
chr5 (176-275)||(6817150-6817251)
chr5 (176-267)||(14143929-14144022)
chr5 (310-435)||(17762517-17762642)
chr5 (321-437)||(41425697-41425814)
chr5 (216-275)||(20709282-20709341)
chr5 (310-431)||(4919011-4919133)
chr5 (216-273)||(4919060-4919117)
chr5 (176-275)||(7125945-7126046)
chr5 (310-391)||(27159052-27159133)
chr5 (313-437)||(28071735-28071860)
chr5 (216-257)||(31799710-31799751)
chr5 (176-267)||(41001610-41001703)
chr5 (178-254)||(18336726-18336805)
chr5 (219-275)||(27159063-27159119)
chr5 (216-267)||(6817378-6817429)
chr5 (216-267)||(7126174-7126225)
chr5 (216-275)||(14144150-14144209)
chr5 (176-207)||(17762310-17762341)
chr5 (216-267)||(24650956-24651007)
chr5 (216-275)||(29445055-29445114)
chr5 (176-206)||(14411724-14411754)
chr5 (150-276)||(22571078-22571207)
chr5 (216-257)||(994013-994054)
chr5 (216-273)||(14411917-14411974)
chr5 (224-265)||(17762464-17762505)
chr5 (216-273)||(17762533-17762590)
chr5 (224-265)||(24650855-24650896)
chr5 (216-273)||(24837239-24837296)
chr5 (313-409)||(28070510-28070604)
chr5 (216-273)||(30512357-30512414)
chr5 (216-273)||(30552697-30552754)
chr5 (334-370)||(6817277-6817313)
[»] chr3 (90 HSPs)
chr3 (283-435)||(5800623-5800775)
chr3 (283-435)||(14262244-14262396)
chr3 (283-435)||(16722009-16722161)
chr3 (283-435)||(19112973-19113125)
chr3 (283-435)||(45003514-45003666)
chr3 (283-435)||(45969933-45970085)
chr3 (283-434)||(38283569-38283720)
chr3 (283-409)||(52552896-52553022)
chr3 (310-435)||(14262054-14262179)
chr3 (283-435)||(14161889-14162041)
chr3 (283-435)||(30500249-30500400)
chr3 (307-434)||(43572623-43572749)
chr3 (283-409)||(21632940-21633066)
chr3 (283-435)||(11003750-11003902)
chr3 (283-435)||(14171794-14171946)
chr3 (283-435)||(20853904-20854055)
chr3 (283-435)||(33372424-33372576)
chr3 (283-432)||(15328484-15328630)
chr3 (283-432)||(43572410-43572561)
chr3 (310-435)||(14162106-14162230)
chr3 (310-434)||(30500062-30500184)
chr3 (310-435)||(52552708-52552835)
chr3 (310-396)||(15328695-15328781)
chr3 (287-433)||(17649222-17649367)
chr3 (295-435)||(35995898-35996035)
chr3 (283-409)||(47575480-47575605)
chr3 (310-435)||(9266993-9267118)
chr3 (310-435)||(16722226-16722351)
chr3 (275-435)||(49986545-49986706)
chr3 (283-435)||(9267183-9267334)
chr3 (310-435)||(19112782-19112908)
chr3 (312-437)||(32998371-32998494)
chr3 (310-435)||(4204727-4204851)
chr3 (310-435)||(5800840-5800964)
chr3 (150-262)||(35740818-35740931)
chr3 (361-435)||(19720351-19720425)
chr3 (150-262)||(36990922-36991036)
chr3 (150-262)||(37016362-37016476)
chr3 (310-392)||(38283785-38283867)
chr3 (310-435)||(14171605-14171729)
chr3 (310-435)||(21633131-21633256)
chr3 (216-275)||(4204778-4204837)
chr3 (150-275)||(14162120-14162247)
chr3 (216-275)||(43572640-43572699)
chr3 (216-273)||(21633147-21633204)
chr3 (310-435)||(33372640-33372764)
chr3 (216-273)||(35995748-35995805)
chr3 (176-264)||(9267002-9267093)
chr3 (283-399)||(17465575-17465691)
chr3 (216-267)||(20853953-20854004)
chr3 (176-275)||(30500070-30500170)
chr3 (310-385)||(35995746-35995821)
chr3 (216-267)||(43572459-43572510)
chr3 (216-267)||(45969985-45970036)
chr3 (216-267)||(49986598-49986649)
chr3 (339-437)||(36990924-36991021)
chr3 (339-437)||(37016364-37016461)
chr3 (310-435)||(49986763-49986888)
chr3 (176-257)||(14171853-14171937)
chr3 (216-257)||(14262106-14262147)
chr3 (313-437)||(35740833-35740955)
chr3 (150-207)||(35741904-35741961)
chr3 (310-435)||(45003731-45003855)
chr3 (216-276)||(45003566-45003626)
chr3 (216-267)||(5800675-5800726)
chr3 (216-275)||(14171656-14171715)
chr3 (176-207)||(14262356-14262387)
chr3 (216-275)||(15328709-15328768)
chr3 (176-207)||(19112791-19112822)
chr3 (176-207)||(19720360-19720391)
chr3 (176-207)||(27946185-27946216)
chr3 (216-267)||(33372476-33372527)
chr3 (315-386)||(45058731-45058802)
chr3 (357-435)||(45970197-45970276)
chr3 (227-273)||(17465449-17465495)
chr3 (310-435)||(20853713-20853839)
chr3 (216-254)||(33372674-33372712)
chr3 (176-206)||(35995705-35995735)
chr3 (216-254)||(45058761-45058799)
chr3 (216-254)||(52552762-52552800)
chr3 (216-257)||(11003802-11003843)
chr3 (216-257)||(16722061-16722102)
chr3 (216-257)||(16722258-16722299)
chr3 (219-276)||(17465615-17465672)
chr3 (216-261)||(17649273-17649318)
chr3 (216-273)||(20853766-20853823)
chr3 (219-256)||(45970183-45970220)
chr3 (150-202)||(3425973-3426025)
chr3 (283-327)||(4204916-4204960)
chr3 (357-437)||(35741867-35741946)
[»] chr7 (71 HSPs)
chr7 (283-435)||(38879932-38880081)
chr7 (283-435)||(28218371-28218523)
chr7 (283-435)||(41600166-41600318)
chr7 (283-430)||(12006748-12006895)
chr7 (283-435)||(20419744-20419897)
chr7 (283-409)||(25772539-25772665)
chr7 (283-435)||(6465873-6466024)
chr7 (310-435)||(20458710-20458834)
chr7 (283-408)||(20458899-20459024)
chr7 (311-435)||(28218196-28218321)
chr7 (283-435)||(1250414-1250566)
chr7 (283-435)||(23704680-23704831)
chr7 (283-395)||(10409431-10409544)
chr7 (310-435)||(12006559-12006683)
chr7 (310-435)||(20419554-20419679)
chr7 (283-435)||(23383708-23383860)
chr7 (283-435)||(48648437-48648587)
chr7 (283-435)||(20963703-20963853)
chr7 (283-431)||(48672487-48672635)
chr7 (283-435)||(7658177-7658325)
chr7 (278-384)||(31851442-31851548)
chr7 (310-435)||(38879741-38879867)
chr7 (310-431)||(23704896-23705016)
chr7 (310-435)||(48648280-48648404)
chr7 (310-409)||(24195031-24195130)
chr7 (305-431)||(16995222-16995347)
chr7 (176-273)||(20419563-20419663)
chr7 (310-435)||(25772382-25772506)
chr7 (176-275)||(28218205-28218308)
chr7 (310-430)||(10409609-10409728)
chr7 (176-276)||(28218411-28218514)
chr7 (310-434)||(41599977-41600101)
chr7 (310-435)||(44816851-44816978)
chr7 (176-273)||(23704912-23705011)
chr7 (176-267)||(41600215-41600309)
chr7 (217-267)||(7658226-7658276)
chr7 (315-409)||(7842484-7842577)
chr7 (310-431)||(23383521-23383643)
chr7 (357-406)||(24194910-24194959)
chr7 (219-275)||(1250279-1250335)
chr7 (216-264)||(20963565-20963613)
chr7 (216-268)||(38879980-38880032)
chr7 (176-273)||(10409625-10409724)
chr7 (176-273)||(12006568-12006667)
chr7 (216-267)||(12006797-12006848)
chr7 (216-275)||(16995269-16995328)
chr7 (176-273)||(20458719-20458818)
chr7 (310-412)||(31851282-31851382)
chr7 (216-267)||(31851496-31851547)
chr7 (218-273)||(44816907-44816962)
chr7 (216-273)||(38879794-38879851)
chr7 (216-273)||(48648331-48648388)
chr7 (357-409)||(14800938-14800990)
chr7 (357-409)||(15247930-15247982)
chr7 (219-267)||(23704734-23704782)
chr7 (310-409)||(33162770-33162870)
chr7 (310-435)||(48672295-48672422)
chr7 (310-409)||(1250250-1250349)
chr7 (176-207)||(6465882-6465913)
chr7 (216-267)||(20419793-20419844)
chr7 (176-207)||(20963813-20963844)
chr7 (216-267)||(25772588-25772639)
chr7 (216-267)||(48672536-48672587)
chr7 (216-257)||(20458958-20458999)
chr7 (356-437)||(23274941-23275021)
chr7 (216-273)||(23383570-23383627)
chr7 (216-273)||(41600028-41600085)
chr7 (313-385)||(23276235-23276307)
chr7 (216-264)||(24195056-24195104)
chr7 (357-437)||(33131649-33131729)
chr7 (216-276)||(48648477-48648537)
[»] chr4 (83 HSPs)
chr4 (283-435)||(9396717-9396869)
chr4 (283-399)||(34064190-34064306)
chr4 (285-435)||(41947066-41947214)
chr4 (312-437)||(43312225-43312350)
chr4 (283-435)||(46046632-46046784)
chr4 (285-435)||(31090271-31090421)
chr4 (283-435)||(3018029-3018182)
chr4 (310-435)||(9516628-9516753)
chr4 (283-435)||(9618998-9619149)
chr4 (283-435)||(15640734-15640885)
chr4 (283-391)||(26252330-26252438)
chr4 (283-410)||(18713003-18713130)
chr4 (289-435)||(13132155-13132299)
chr4 (310-435)||(37012725-37012850)
chr4 (283-435)||(9516818-9516970)
chr4 (283-435)||(38574176-38574328)
chr4 (284-435)||(37012916-37013066)
chr4 (310-435)||(9396934-9397058)
chr4 (312-409)||(36888917-36889012)
chr4 (283-435)||(48580074-48580226)
chr4 (283-385)||(4355949-4356051)
chr4 (310-435)||(3018247-3018370)
chr4 (310-435)||(38573987-38574111)
chr4 (310-435)||(48579884-48580009)
chr4 (176-267)||(9619007-9619101)
chr4 (310-435)||(13131958-13132084)
chr4 (310-435)||(31090078-31090204)
chr4 (283-395)||(7819071-7819184)
chr4 (314-435)||(9619218-9619339)
chr4 (283-435)||(31943967-31944120)
chr4 (310-435)||(34064000-34064125)
chr4 (294-435)||(35376181-35376321)
chr4 (176-267)||(35376190-35376283)
chr4 (314-435)||(35376367-35376487)
chr4 (283-383)||(3273692-3273792)
chr4 (312-396)||(12520696-12520780)
chr4 (352-435)||(48259841-48259924)
chr4 (310-435)||(18667524-18667650)
chr4 (310-404)||(18713195-18713288)
chr4 (310-435)||(26252472-26252597)
chr4 (310-435)||(31944185-31944310)
chr4 (310-434)||(4356116-4356239)
chr4 (357-409)||(12904791-12904842)
chr4 (283-319)||(18667423-18667459)
chr4 (216-276)||(31944020-31944080)
chr4 (176-273)||(46046457-46046551)
chr4 (313-437)||(50462634-50462758)
chr4 (310-409)||(3273855-3273953)
chr4 (216-275)||(3273869-3273928)
chr4 (216-275)||(7819263-7819322)
chr4 (154-255)||(9396968-9397071)
chr4 (216-275)||(15640964-15641023)
chr4 (216-267)||(26252338-26252389)
chr4 (216-275)||(37012777-37012836)
chr4 (216-275)||(38574038-38574097)
chr4 (176-267)||(46046681-46046775)
chr4 (310-396)||(15640950-15641036)
chr4 (310-383)||(7819249-7819322)
chr4 (216-273)||(12904816-12904873)
chr4 (216-273)||(26252488-26252545)
chr4 (216-273)||(31090131-31090188)
chr4 (176-267)||(37012964-37013057)
chr4 (388-437)||(46934087-46934136)
chr4 (216-256)||(7819084-7819124)
chr4 (216-264)||(34064052-34064100)
chr4 (219-275)||(35376377-35376433)
chr4 (216-276)||(38574216-38574276)
chr4 (216-267)||(3018082-3018133)
chr4 (216-267)||(3273692-3273743)
chr4 (216-267)||(9516867-9516918)
chr4 (216-275)||(18713209-18713268)
chr4 (216-267)||(31090318-31090369)
chr4 (176-207)||(31218301-31218332)
chr4 (354-435)||(41946983-41947061)
chr4 (216-273)||(9516680-9516737)
chr4 (216-257)||(34064249-34064290)
chr4 (150-207)||(36887681-36887738)
chr4 (150-207)||(43313531-43313588)
chr4 (216-265)||(46935099-46935148)
chr4 (216-264)||(20069560-20069608)
chr4 (216-276)||(31944198-31944258)
chr4 (313-437)||(36887696-36887820)
chr4 (216-264)||(48260011-48260059)
[»] chr6 (47 HSPs)
chr6 (275-437)||(14681082-14681244)
chr6 (283-435)||(9481200-9481352)
chr6 (284-391)||(30618024-30618131)
chr6 (283-435)||(32017712-32017863)
chr6 (283-435)||(24731953-24732108)
chr6 (283-395)||(33637617-33637729)
chr6 (283-430)||(3230071-3230217)
chr6 (310-409)||(9481417-9481516)
chr6 (275-398)||(17142838-17142960)
chr6 (310-435)||(9854122-9854245)
chr6 (310-435)||(30618196-30618322)
chr6 (310-430)||(14680908-14681025)
chr6 (310-435)||(24732173-24732297)
chr6 (283-383)||(2299518-2299617)
chr6 (283-391)||(10321939-10322047)
chr6 (310-435)||(33714501-33714630)
chr6 (357-434)||(9154898-9154976)
chr6 (339-430)||(19284152-19284243)
chr6 (216-275)||(30618210-30618269)
chr6 (275-322)||(33714687-33714734)
chr6 (310-435)||(18500333-18500457)
chr6 (216-273)||(26385348-26385405)
chr6 (176-267)||(32017761-32017854)
chr6 (154-275)||(10321738-10321859)
chr6 (310-412)||(32017581-32017679)
chr6 (216-275)||(9854136-9854195)
chr6 (176-273)||(18500342-18500441)
chr6 (216-267)||(19284199-19284250)
chr6 (313-435)||(21069532-21069655)
chr6 (216-275)||(33637629-33637688)
chr6 (314-431)||(26385300-26385417)
chr6 (216-256)||(9154950-9154990)
chr6 (286-322)||(18500558-18500594)
chr6 (176-207)||(2299367-2299398)
chr6 (176-207)||(9481209-9481240)
chr6 (216-275)||(9481431-9481490)
chr6 (216-267)||(17142747-17142798)
chr6 (176-207)||(24731962-24731993)
chr6 (216-267)||(24732008-24732059)
chr6 (216-275)||(30458971-30459030)
chr6 (150-200)||(9854212-9854262)
chr6 (361-435)||(26385560-26385634)
chr6 (310-396)||(30458958-30459044)
chr6 (216-253)||(2299580-2299617)
chr6 (216-273)||(24732189-24732246)
chr6 (216-273)||(33714557-33714614)
chr6 (223-264)||(34884627-34884668)
[»] scaffold0809 (3 HSPs)
scaffold0809 (283-412)||(1452-1580)
scaffold0809 (310-435)||(1645-1766)
scaffold0809 (216-267)||(1480-1531)
[»] scaffold0361 (3 HSPs)
scaffold0361 (283-435)||(4580-4733)
scaffold0361 (310-435)||(4798-4922)
scaffold0361 (216-273)||(4814-4871)
[»] scaffold0185 (3 HSPs)
scaffold0185 (283-410)||(4077-4204)
scaffold0185 (312-435)||(3887-4010)
scaffold0185 (176-268)||(3896-3991)
[»] scaffold0449 (3 HSPs)
scaffold0449 (283-435)||(7407-7560)
scaffold0449 (176-267)||(7456-7551)
scaffold0449 (216-264)||(7296-7344)
[»] scaffold0881 (1 HSPs)
scaffold0881 (283-427)||(428-569)
[»] scaffold0117 (2 HSPs)
scaffold0117 (310-435)||(12217-12342)
scaffold0117 (216-257)||(12249-12290)
[»] scaffold0141 (3 HSPs)
scaffold0141 (310-432)||(8557-8679)
scaffold0141 (154-275)||(8571-8695)
scaffold0141 (283-435)||(8343-8493)
[»] scaffold0352 (2 HSPs)
scaffold0352 (346-437)||(5949-6041)
scaffold0352 (313-435)||(4685-4807)
[»] scaffold0157 (1 HSPs)
scaffold0157 (312-396)||(137-221)
[»] scaffold0477 (1 HSPs)
scaffold0477 (216-273)||(4999-5056)
[»] scaffold0176 (2 HSPs)
scaffold0176 (176-267)||(15889-15979)
scaffold0176 (283-435)||(15841-15988)
[»] scaffold0220 (2 HSPs)
scaffold0220 (216-265)||(27648-27697)
scaffold0220 (330-437)||(26495-26600)


Alignment Details
Target: chr8 (Bit Score: 368; Significance: 0; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 17 - 481
Target Start/End: Original strand, 21144442 - 21144911
Alignment:
Q  17 caatgtgcttgtacaacactcagggaaaatgcaccatggtaagcaaaccaacctccctatttctctttctggatatgcatgccacctgtttgatcaaatg 116  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21144442 caatgtgcctgtaccacactcagggaaaatgcaccatggtaagcaaaccaacctccctatttctctttctggatatgcatgccacctgtttgatcaaatg 21144541  T
Q  117 tgtctatgaaaagctcaatataataataataccggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnn- 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||            
T  21144542 tgtctatgaaaagctcaatataataataataccggttaatactgcttttggtacccgtaatattagagaattccggttttagtccctgtaacaaaaaaaa 21144641  T
Q  216 --tagattttgtccctgtaatttta--gattcttccatttttggtctctcatttcactacgtcaagtgagtggaatctgaaattacagggacgtaattta 311  Q
      ||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21144642 tatagattttgtcccggtaattttatagattcttccatttttggtctctcatttcactacgtcaagtgagtggaatctcaaattacagggacgtaattta 21144741  T
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  21144742 tgcagattctgctgacgtggttaaataagggacgaaaaatggaggaatctgaaattacaaggacaaaatctaaattttttattttatagggactaaaatc 21144841  T
Q  412 gggatttgttaatattacagggaccatagccttaataatatttgtagttttgaactttgatcgcgttctt 481  Q
    || ||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  21144842 ggaattcgttaatattacagggaccataaccctaataatatttgtagttttgaactttgatcgcgttctt 21144911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 283 - 431
Target Start/End: Original strand, 21148144 - 21148292
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||| |||| ||||  ||| ||||||||||||||||||||||    
T  21148144 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatgatgaaaggagggactaaaagtggaagaatatgaaattacaaggacaaaatct 21148243  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacag 431  Q
    || |||||| ||||||| ||||||||| ||| |||   |||||||||||    
T  21148244 aattttttttttttacagggactaaaaccggaattcactaatattacag 21148292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 284 - 435
Target Start/End: Complemental strand, 10108539 - 10108388
Alignment:
Q  284 gaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatcta 383  Q
    ||||||||||||||| |||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| |||||||||| ||||||||||||    
T  10108539 gaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatcta 10108440  T
Q  384 aattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||| |||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  10108439 aatctttttttttacagggactaaaaccggaattcgctaatattacagggac 10108388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 283 - 432
Target Start/End: Complemental strand, 2583490 - 2583341
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  |||||  |||| | ||  |||| ||||||||| |||||||||||    
T  2583490 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggatcaaaagtagaagaatccgaaattacagggacaaaatct 2583391  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagg 432  Q
    |||| |||||||||||||| ||||||||||  ||| | ||||||||||||    
T  2583390 aaatcttttattttacaagaactaaaatcgaaattcgctaatattacagg 2583341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 5555039 - 5554887
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| || | ||| ||||||| |||| ||||  ||| |||||||| | |||||||||||    
T  5555039 ggaatctgaaattccagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatatgaaattatagggacaaaatct 5554940  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
     ||| |||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  5554939 gaatctttttttttacagggactaaaaccggaattcgctaatattacagggac 5554887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 285 - 432
Target Start/End: Complemental strand, 26136853 - 26136706
Alignment:
Q  285 aatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaa 384  Q
    ||||||||||||||||||||||||||||||||||| ||||||| || | |||  ||| |  |||| ||||  ||||||||||||||||||||||||||||    
T  26136853 aatctgaaattacagggacgtaatttatgcagattatgctgacttgatgaaaggaggaatcaaaattggaagaatctgaaattacaaggacaaaatctaa 26136754  T
Q  385 attttttattttacaaggactaaaatcgggatttgttaatattacagg 432  Q
    ||||||| ||||||| |||||||||  || ||| | ||||||||||||    
T  26136753 atttttttttttacagggactaaaactggaattcgctaatattacagg 26136706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 285 - 435
Target Start/End: Complemental strand, 14820462 - 14820313
Alignment:
Q  285 aatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaa 384  Q
    ||||||||||||||||||||||||||||||||||||||||||  || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||||    
T  14820462 aatctgaaattacagggacgtaatttatgcagattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatctaa 14820363  T
Q  385 attttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    || |||| ||||||| | ||||||| ||| ||| | |||||||||||||||    
T  14820362 atctttt-ttttacaggaactaaaaccggaattcgctaatattacagggac 14820313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 10108605 - 10108730
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  10108605 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 10108704  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||||| |||||||||||||||    
T  10108705 ccggaatttgctaatattacagggac 10108730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 21148080 - 21147954
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  |||||||||||||| ||||||||||||||| ||||| ||||||| ||||||||    
T  21148080 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 21147981  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    | ||| ||| | |||||||||||||||    
T  21147980 accggaattcgctaatattacagggac 21147954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 14820529 - 14820654
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  14820529 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 14820628  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  14820629 ccggaattcgctaatattacagggac 14820654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 30789715 - 30789867
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||| |||||||||| ||||||||| ||||||| || | |||  | |||| |||| ||||  |||||||||||||| |||||||||||    
T  30789715 ggaatatgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaacgatggaccaaaagtggaagaatctgaaattacagggacaaaatct 30789814  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| ||||||||| ||| ||||  |||||||||||||||    
T  30789815 aaatctttttatttacagggactaaaaccggaatttactaatattacagggac 30789867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 434
Target Start/End: Original strand, 17623095 - 17623245
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| || | |||  || ||| |||| ||||  ||| ||||||||||||||||||||||    
T  17623095 ggaatttgaaattacagggacataatttatgcagattctgctgacgtgatgaaaggagtgaccaaaagtggaagaatttgaaattacaaggacaaaatct 17623194  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacaggga 434  Q
    |||| |||| ||||||| | ||||||| | | ||| | ||||||||||||||    
T  17623195 aaatctttt-ttttacaggcactaaaaccagaattggctaatattacaggga 17623245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 7689758 - 7689883
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  ||| |||||  |||| ||||  |||||||||||||| ||||||||| ||||| |||| ||||||| |||||||||    
T  7689758 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatttaaatctttttttttacacggactaaaa 7689857  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||| ||| | |||||||||||||||    
T  7689858 tcggaattcgctaatattacagggac 7689883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 42605923 - 42605773
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||||||||||||| ||||| ||||| || |||||  |||||| |||| ||||  ||| |||||||||| ||| |||||||    
T  42605923 ggaatttgaaattacagggacgtaatttatgcatattctactgacgtgattaaaggagggaccaaaagtggaagaatatgaaattacagggataaaatct 42605824  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||  ||||| |||||||   ||||||||||| ||| |||||||||||| ||||    
T  42605823 aa--ttttttttttacagaaactaaaatcggaattcgttaatattacatggac 42605773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 307 - 435
Target Start/End: Original strand, 5555101 - 5555229
Alignment:
Q  307 atttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggacta 406  Q
    ||||||||||||| ||||||||||||  |||||||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| |||||||  |||||    
T  5555101 atttatgcagattttgctgacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagagacta 5555200  T
Q  407 aaatcgggatttgttaatattacagggac 435  Q
    ||| ||  ||| | |||||||||||||||    
T  5555201 aaaccgaaattcgctaatattacagggac 5555229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 22494554 - 22494447
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || ||||| || |||| |||||||||  ||| |||||||||| | |||||||||    
T  22494554 ggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgattaaagaa-ggaccaaaaatggaagaatatgaaattacaggaacaaaatct 22494456  T
Q  383 aaatttttt 391  Q
    || ||||||    
T  22494455 aattttttt 22494447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 432
Target Start/End: Original strand, 14767715 - 14767861
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || | |||  ||||||  ||| ||||  ||| |||||||||| |||||||||||    
T  14767715 ggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaattacagggacaaaatct 14767814  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagg 432  Q
    ||   |||| ||||||| ||||||||| ||  ||||  ||||||||||||    
T  14767815 aa---tttttttttacagggactaaaaacgaaatttactaatattacagg 14767861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 30789650 - 30789526
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| |||| || |||| |||| |||||  |||| ||||| ||||||||||||||  |||||||||||||| |||| ||||||| |||||||||    
T  30789650 tatgcagattttgctaacgtggtgaaatgagggatcaaaagtggaggaatctgaaattacagagacaaaatctaaatctttt-ttttacagggactaaaa 30789552  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||| ||| | |||||||||||||||    
T  30789551 tcggaattcgctaatattacagggac 30789526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 42113127 - 42113003
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||| |||| |||||| |||| || |  ||||| |||||||| ||||| ||||||||| |||| ||||||| |||||||||    
T  42113127 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtgaaagaatcttaaattacagggacataatctaaatctttt-ttttacagggactaaaa 42113029  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||| ||| | |||||||||||||||    
T  42113028 tcggaattcgctaatattacagggac 42113003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 7689693 - 7689542
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||| ||||||||| ||| ||  || | |||  |||||| |||| ||||  ||||||||||||||||||| ||||||    
T  7689693 ggaatctgaaattacaaggacgtaattgatgcagattttgccgatgtgatgaaaagagggaccaaaagtggaagaatctgaaattacaaggac-aaatct 7689595  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||||||||||||  ||  ||| | |||||||||||||||    
T  7689594 aaatctttttatttacaaggactaaagccgaaattcgctaatattacagggac 7689542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 310 - 396
Target Start/End: Complemental strand, 14767650 - 14767564
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttatttt 396  Q
    |||||||||||||||||| ||||  |||||||||| |||| |||| ||||||||||||||| ||||||||||||||| |||| ||||    
T  14767650 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttttttttt 14767564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 431
Target Start/End: Original strand, 43481522 - 43481671
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||||||||||||| ||||||| || |||||  |  ||| || | ||||  ||| |||||||||| ||||||||| |    
T  43481522 ggaatctgaaattacaaggacgtaatttatgcagattgtgctgacgtgattaaaggaaagaccaagagtggaagaatttgaaattacagggacaaaattt 43481621  T
Q  383 aaat-tttttattttacaaggactaaaatcgggatttgttaatattacag 431  Q
    |||| ||||| |||||||  |||||||| ||| ||| | |||||||||||    
T  43481622 aaatcttttttttttacagagactaaaaccggaattcgctaatattacag 43481671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 38726783 - 38726703
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    ||||||||||||||||||||||||||||| ||||| ||||| | ||||||||| ||| ||||| | |||||||||||||||    
T  38726783 aatctgaaattacaaggacaaaatctaaacttttttttttatagggactaaaaccggaatttgctcatattacagggacca 38726703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 428
Target Start/End: Complemental strand, 26532926 - 26532807
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||||||||||||||||| ||||  ||| |||||  |||| |||| |||| |||||||||| ||||||||||||||| ||||| ||||||| ||||||||    
T  26532926 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaaaaatttgaaattacagggacaaaatctaaatcttttttttttacatggactaaa 26532827  T
Q  409 atcgggatttgttaatatta 428  Q
    | ||| ||| | ||||||||    
T  26532826 accggaattcgctaatatta 26532807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 339 - 437
Target Start/End: Complemental strand, 40486742 - 40486645
Alignment:
Q  339 agggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||||| |||| ||||  ||||| |||||||||||||| |||||||| ||||| |||| || ||||||||||||| ||| |||||||||||||||||||    
T  40486742 agggactaaaagtggaataatctaaaattacaaggacagaatctaaacttttt-ttttgcagggactaaaatcggaattcgttaatattacagggacca 40486645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 43851807 - 43851683
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||  ||||  ||| |||||  |||| ||||  |||||||||||||| ||||||||||||||| ||||  |||||| |||||||||    
T  43851807 tatgcagattctgctgatgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttt-gtttacagggactaaaa 43851709  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  43851708 ccggaattcgctaatattacagggac 43851683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 315 - 435
Target Start/End: Original strand, 10171383 - 10171503
Alignment:
Q  315 agattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcggg 414  Q
    |||||||||||||||| |  ||| |||||| |||| || |  ||||| |||||||| |||||||||||||||  ||| ||||||| ||||||||| |||     
T  10171383 agattctgctgacatgatggaatgagggaccaaaagtgaaagaatctaaaattacagggacaaaatctaaatagttttttttacagggactaaaaccgga 10171482  T
Q  415 atttgttaatattacagggac 435  Q
    ||| | |||||||||||||||    
T  10171483 attcgctaatattacagggac 10171503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 264
Target Start/End: Complemental strand, 10171516 - 10171403
Alignment:
Q  154 aatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatt 250  Q
    ||||| |||||| || || || ||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||| || |    
T  10171516 aataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctttcact 10171417  T
Q  251 tttggtctctcatt 264  Q
    ||||||| ||||||    
T  10171416 tttggtccctcatt 10171403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 42113192 - 42113341
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||| ||||||||||||| | |||||||||| | |||  |||||  |||| ||||  ||| |||||||| | ||||| |||||    
T  42113192 ggaatatgaaattacagggacataatttatgcagaatttgctgacatgatgaaaggagggatcaaaagtggaagaatttgaaattaaagggacataatct 42113291  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||   |||| ||||||| | ||||||| ||  ||| |||||||||||||||||    
T  42113292 aa---tttttttttacaggaactaaaaccgaaattcgttaatattacagggac 42113341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 275
Target Start/End: Original strand, 21147937 - 21148066
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnn----tagattttgtccctgtaattttagattctt 245  Q
    |||||||||  ||||| || || || ||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||||||    
T  21147937 ggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattctt 21148036  T
Q  246 ccatttttggtctctcatttcactacgtca 275  Q
    ||| |||||||| || ||| ||| ||||||    
T  21148037 ccacttttggtcccttattccaccacgtca 21148066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 22848549 - 22848600
Alignment:
Q  378 aatctaaattttttattttacaaggactaaaatcgggatttgttaatattac 429  Q
    |||||||||||||||||||||||||||||||||||| ||| | |||||||||    
T  22848549 aatctaaattttttattttacaaggactaaaatcggaattcgctaatattac 22848600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 43851692 - 43851782
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||||||||||||||||||||||||||||        |  |||||||||||||||||||| ||||||||||| ||||| || ||||||    
T  43851692 atattagcgaattccggttttagtccctgtaaacaaaagatttagattttgtccctgtaatttcagattcttccacttttgatccctcatt 43851782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 275
Target Start/End: Complemental strand, 14820671 - 14820543
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt---aacnnnnnnntagattttgtccctgtaattttagattcttc 246  Q
    |||||||||  ||||| || || || ||||||||||||||||||||||||||||||   ||        ||||||||||||||||||||| | |||||||    
T  14820671 ggttaatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 14820572  T
Q  247 catttttggtctctcatttcactacgtca 275  Q
    || |||||||| || ||| ||| ||||||    
T  14820571 cacttttggtcccttattccaccacgtca 14820543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 391
Target Start/End: Original strand, 26136920 - 26137001
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaatttttt 391  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  |||||||||||||| ||||||||||||| ||||||    
T  26136920 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaattttttt 26137001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 26136993 - 26136936
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||| ||| ||||    
T  26136993 tagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgt 26136936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 42113012 - 42113113
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||||| |||||||||||||||        |  ||||| |||||||||||||| |||||||| || |||||||| |||||||||| ||||    
T  42113012 atattagcgaattccgattttagtccctgtaaaaaaaagatttagattatgtccctgtaatttaagattctttcacttttggtccctcatttcaccacgt 42113111  T
Q  274 ca 275  Q
    ||    
T  42113112 ca 42113113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 311 - 435
Target Start/End: Original strand, 42605989 - 42606113
Alignment:
Q  311 atgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaat 410  Q
    ||||| |||||||| || ||||  ||||| |||| |||| ||||  ||| |||||||||  ||||||||||||||| |||| |||||||  ||||||||     
T  42605989 atgcaaattctgcttacgtggtggaataatggaccaaaagtggaagaatttgaaattacggggacaaaatctaaatctttttttttacattgactaaaac 42606088  T
Q  411 cgggatttgttaatattacagggac 435  Q
    | | ||| | |||||||||||||||    
T  42606089 cagaattcgctaatattacagggac 42606113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 10108397 - 10108491
Alignment:
Q  176 atattagcgaattccggttttagtccctgt---aacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||||||   ||        ||||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  10108397 atattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttca 10108491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 275
Target Start/End: Complemental strand, 10108747 - 10108619
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttc 246  Q
    |||||||||  ||||| || || || |||||||| |||||||||||||||||||||||           ||||||||||||||||||||| | |||||||    
T  10108747 ggttaatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 10108648  T
Q  247 catttttggtctctcatttcactacgtca 275  Q
    || |||||||| || ||| ||| ||||||    
T  10108647 cacttttggtcccttattccaccacgtca 10108619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 14820322 - 14820415
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||||||||||||||||||| |||||||        |  |||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  14820322 atattagcgaattccggttttagttcctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttca 14820415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 30789815 - 30789774
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  30789815 tagattttgtccctgtaatttcagattcttccacttttggtc 30789774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 35367507 - 35367426
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattt-tttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||||||||||||| ||||||||||||| ||| ||| ||||||| ||| ||||| ||| ||| | ||||||| |||||||||    
T  35367507 aatctgaaattacagggacaaaatctaattttattttttttacagggattaaaaccggaattcgctaatattgcagggacca 35367426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 7689828 - 7689772
Alignment:
Q  219 attttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||||||||||||| ||||||||||| ||||| || |||||| ||| ||||||    
T  7689828 attttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgtca 7689772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 5554896 - 5554927
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  5554896 atattagcgaattccggttttagtccctgtaa 5554927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 14767577 - 14767636
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| || ||| ||| ||||||    
T  14767577 tagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtca 14767636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 275
Target Start/End: Original strand, 17622969 - 17623016
Alignment:
Q  228 ctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| |||||||| |||||| ||| ||||||    
T  17622969 ctgtaattttagattcttccacttttggtccctcattccaccacgtca 17623016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 435
Target Start/End: Original strand, 18044111 - 18044187
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||||||| ||||||||| ||| | ||||  |||||| ||||||||| ||| ||| | |||||||||||||||    
T  18044111 aatctgaaattacagggacaaaatataattatttt--tttacatggactaaaaccggaattcgctaatattacagggac 18044187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 30789535 - 30789634
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||||| |||||||||||||||        |  |||||||||| ||||||||| |||||| |||| ||||| || |||||||||| ||||    
T  30789535 atattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaatttcagattcctccacttttgatccctcatttcaccacgt 30789634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 178 - 257
Target Start/End: Original strand, 22494418 - 22494496
Alignment:
Q  178 attagcgaattccggttttagtccctgtaacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    |||||| |||| ||||||||||||||||||        |||||||||| |||||||||| | ||||||||||||||||||    
T  22494418 attagcaaatttcggttttagtccctgtaa-aaaaaattagattttgttcctgtaatttcatattcttccatttttggtc 22494496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 40486630 - 40486684
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctg 204  Q
    |||||||||| |||||||| || || |||||| ||||||||| ||||||||||||    
T  40486630 ggttaatactacttttggtccctgtaatattaacgaattccgattttagtccctg 40486684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 5555177 - 5555136
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||||||||||| | ||||||||| ||||||||    
T  5555177 tagattttgtccctgtaatttcatattcttccacttttggtc 5555136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 409
Target Start/End: Complemental strand, 17623027 - 17622934
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| ||||  ||| |||||| |||| ||||  ||||| ||||||| || ||||||||||||| |||  ||||||| |||||||||    
T  17623027 gcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattac-agaacaaaatctaaatcttt--ttttacagggactaaaa 17622934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 20875836 - 20875714
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcg 412  Q
    ||||||| || ||||| | |||| | |||||| |||| ||||  |||||||||| | | ||||| |||| ||| |||||  |||||||||||||||| ||    
T  20875836 gcagattttgttgacaagtttaagtgagggactaaaagtggaagaatctgaaataatagggacataatccaaacttttt--tttacaaggactaaaaccg 20875739  T
Q  413 ggatttgttaatattacagggacca 437  Q
      ||||| | |||||||||||||||    
T  20875738 aaatttgctcatattacagggacca 20875714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 20877122 - 20877069
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccct 203  Q
    |||||||||  |||||||| || || |||| |||||||||||||||||||||||    
T  20877122 ggttaatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 22494692 - 22494635
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||| |||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  22494692 tagaatttgtccctgtaatttcaaattcttccacttttggtccctcattccaccacgt 22494635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 22848623 - 22848566
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||| | |||  |||| |||||||||||||||| ||||||||| |||||    
T  22848623 ggttaatactgctctgggtcaccgtaatattagcgaattccgattttagtccttgtaa 22848566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 40487791 - 40487734
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  |||||||| |  || ||||||||||||||| ||||||||||||||||    
T  40487791 ggttaataccacttttggtccttgtaatattagcgaattccagttttagtccctgtaa 40487734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 43851872 - 43851916
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgac 327  Q
    |||||||||||||||| |||||||||| ||||| ||| |||||||    
T  43851872 ggaatctgaaattacaaggacgtaattgatgcaaattttgctgac 43851916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 3e-52; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 282 - 430
Target Start/End: Original strand, 16294154 - 16294302
Alignment:
Q  282 tggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatc 381  Q
    |||||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  16294154 tggaatcataaattacagggacgtaatttatgtagattctgctgacatggttaaataagggaccaaaagtggaggaatatgaaattacaaggacaaaatc 16294253  T
Q  382 taaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    |||||||||||||||||| ||||||||||||  ||||| ||||||||||    
T  16294254 taaattttttattttacagggactaaaatcgaaatttgctaatattaca 16294302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 283 - 431
Target Start/End: Original strand, 34749313 - 34749461
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||| |||||||||||||||||||||||| || |||||  ||| || |||| ||||  |||||||||||||| ||| |||||||    
T  34749313 ggaatctgaaattacagggatgtaatttatgcagattctgctgacgtgattaaaggaggtaccaaaagtggaagaatctgaaattacagggataaaatct 34749412  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacag 431  Q
    |||| |||| ||||||||||||||||||||| ||| | |||||||||||    
T  34749413 aaatctttttttttacaaggactaaaatcggaattcgataatattacag 34749461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 283 - 434
Target Start/End: Original strand, 4907170 - 4907321
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  4907170 ggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 4907269  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacaggga 434  Q
    |||| |||||||||||| |||||||||  || ||| | ||||||||||||||    
T  4907270 aaatcttttattttacagggactaaaactggaattcgctaatattacaggga 4907321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 8292974 - 8292822
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  ||| || |||| ||||  ||| ||||||| || |||||||||||    
T  8292974 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaagaggaaccaaaagtggaagaatatgaaatttcagggacaaaatct 8292875  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||||||||||| ||||||||| ||||||| | ||||| |||||||||    
T  8292874 aaatcttttattttacagggactaaaaccgggattcgctaatagtacagggac 8292822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 33628898 - 33629050
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||| || |||||  |||||| |||| ||||  |||||||||||||| ||||||||||     
T  33628898 ggaatttgaaattacagggacataatttatgtagattctgctgacgtgattaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatca 33628997  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    || |||||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  33628998 aattttttttttttacagggactaaaaccggaattcgctaatattacagggac 33629050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 39711242 - 39711096
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| || |||||  |||||| |||| ||||  ||| ||||||||||||||||||||||    
T  39711242 ggaatatgaaattacaaggacgtaatttatgcagattctgctgacgtgattaaaggagggaccaaaagtggaagaatatgaaattacaaggacaaaatct 39711143  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    |||| |||| ||||||| ||||||||| ||| ||| | ||||||||||    
T  39711142 aaatctttt-ttttacagggactaaaaccggaattcgctaatattaca 39711096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 43539517 - 43539370
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| | |||||||| |||||||||||    
T  43539517 ggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaacaatataaaattacagggacaaaatct 43539418  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    ||||  ||| ||||||||||||||||||||| ||||| |||| |||||    
T  43539417 aaatcgttttttttacaaggactaaaatcggaatttgctaatcttaca 43539370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 17606478 - 17606322
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||||||||||||||||| |||||||||||||| || | |||| |||||| |||| ||||  ||| |||||||||| | |||||||||    
T  17606478 ggaatatgaaattacagggacgtaatttatacagattctgctgacgtgatgaaatgagggaccaaaagtggaagaatatgaaattacaggaacaaaatct 17606379  T
Q  383 aaa----ttttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||    |||||| ||||||| ||||||||||||| ||| | |||||||||||||||    
T  17606378 aaatctttttttttttttacagggactaaaatcggaattcgctaatattacagggac 17606322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 18462455 - 18462304
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||  |||||||||||||||||||||  |||| || | |||  |||||| |||||||||  |||||||||||||| |||||||||||    
T  18462455 ggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaaatggaagaatctgaaattacagggacaaaatct 18462356  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  18462355 aaatctttt-ttttacagggactaaaaccggaattcgctaatattacagggac 18462304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 24467798 - 24467647
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||  |||||||||||||||||||||  |||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  24467798 ggaatatgaaattacaatgacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 24467699  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| |||||||||| || ||| | |||||||||||||||    
T  24467698 aaatctttt-ttttacagggactaaaattggaattcgctaatattacagggac 24467647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 30299401 - 30299250
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||| |||||||| |||| || | |||  || ||| |||| ||||  ||| |||||||||| |||||||||||    
T  30299401 ggaatctgaaattacagggacgtaatttatggagattctgttgacttgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatct 30299302  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| |||||| |||||||||||||   || | |||||||||||||||    
T  30299301 aaatctttttttttac-aggactaaaatcgaagttcgctaatattacagggac 30299250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 42510222 - 42510377
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||  |||||||||||||||||||||||| || | |||| |||||  | || ||||  |||||||||||| | ||  | |||||    
T  42510222 ggaatctgaaattacaggggtgtaatttatgcagattctgctgacgtgatgaaatgagggaatacaagtggaagaatctgaaattataggggtagaatct 42510321  T
Q  383 aaa-ttttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    ||| |||||| ||||||||||||||||| ||| ||| | |||||||||||||||||    
T  42510322 aaattttttttttttacaaggactaaaaccggaattcgctaatattacagggacca 42510377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 275 - 399
Target Start/End: Original strand, 215112 - 215236
Alignment:
Q  275 aagtgagtggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaagga 374  Q
    ||||||| | ||||||||||||||  |||||||||||| || ||| ||  ||| ||||||||||| | |  ||||||| |  ||||||||||||||||||    
T  215112 aagtgagagaaatctgaaattacaatgacgtaatttatacaaattttgtcgacgtggttaaataaagaataaaaaatgaaagaatctgaaattacaagga 215211  T
Q  375 caaaatctaaattttttattttaca 399  Q
    |||||||||||||||||||||||||    
T  215212 caaaatctaaattttttattttaca 215236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 17606543 - 17606666
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| ||| ||||||| ||||  |||||||||| |||| ||||  |||||||||||||||||||||||||||||| |||  ||||||| |||||||||    
T  17606543 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatcttt--ttttacagggactaaaa 17606640  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  17606641 ccggaattcgctaatattacagggac 17606666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 17501967 - 17502091
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    ||||||||||||||||| |||||||  |||||| |||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||| | ||||||||| |    
T  17501967 tgcagattctgctgacagggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaacttttt-ttttatagggactaaaacc 17502065  T
Q  412 gggatttgttaatattacagggacca 437  Q
    || ||| | |||||||||| ||||||    
T  17502066 ggaattcgctaatattacaaggacca 17502091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 39970853 - 39971006
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||| ||||| |||||||  ||||||||| |||||||||||| || | ||| ||||||| |||| ||||   |||| |||||||| |||||||||||    
T  39970853 ggaatctaaaatttcagggacacaatttatgcggattctgctgacgtgatgaaagaagggaccaaaagtggaaggatctaaaattacagggacaaaatct 39970952  T
Q  383 aaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||| ||||||| ||||||||| ||  ||| |||||||||||| ||||    
T  39970953 aaatcttttttttttacagggactaaaaccgaaattcgttaatattacatggac 39971006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 18462519 - 18462643
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||| |||| |||| |||| || ||| |||| ||||  |||||||||||||  ||||||||||||||| |||| || |||||| |||||||    
T  18462519 tatgcagattctgttgacgtggtgaaatgagagaccaaaagtggaagaatctgaaattacggggacaaaatctaaatctttttttatacaagaactaaaa 18462618  T
Q  410 tcgggatttgttaatattacaggga 434  Q
     ||| ||||| ||||||||||||||    
T  18462619 ccggaatttgctaatattacaggga 18462643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 430
Target Start/End: Original strand, 24467862 - 24467982
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||| ||||| |||| |||| |||||| |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  24467862 tatgcagattctactgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 24467961  T
Q  410 tcgggatttgttaatattaca 430  Q
     ||| |||   ||||||||||    
T  24467962 ccggaattcactaatattaca 24467982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 43539582 - 43539707
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||| |||||| ||||  |||||||||| |||| ||||  ||| |||||||||| |||||||||| |  |||||| ||||||| | |||||||    
T  43539582 tatgcagattcggctgacgtggtggaataagggaccaaaactggaagaatttgaaattacatggacaaaatcaatttttttttttttacaggaactaaaa 43539681  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||||| |||||||||||||||    
T  43539682 ccggaatttgctaatattacagggac 43539707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 42510157 - 42510034
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||  |||| |||| |||||| |||| ||||  ||| |||||||||| |||||||||||||||| ||| ||||||| ||| |||||    
T  42510157 tatgcagattctgctgatgtggtgaaatgagggactaaaagtggaagaatatgaaattacagggacaaaatctaaattattt-ttttacagggattaaaa 42510059  T
Q  410 tcgggatttgttaatattacaggga 434  Q
     ||| ||| | ||||||||||||||    
T  42510058 ccggaattcgctaatattacaggga 42510034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 39826258 - 39826406
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||| |||||||| |||||||||| ||||||||| ||||||| || | |||    |||| |||| ||||  |||||||||||||| |||||||||||    
T  39826258 ggaatctaaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaa----ggaccaaaagtggaagaatctgaaattacagggacaaaatct 39826353  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| ||||||||| ||  ||| | |||||||||| ||||    
T  39826354 aaatctttttatttacagggactaaaaccgaaattcgctaatattacatggac 39826406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 48072131 - 48071984
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||  || | |||  |||||  |||| ||||  ||| |||||||||| |||||||||||    
T  48072131 ggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggagcaaaagtggaataatatgaaattacagggacaaaatct 48072032  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    |||| |||| | ||||| | ||||||| | | ||| | ||||||||||    
T  48072031 aaatcttttttattacaggaactaaaaccagaattcgctaatattaca 48071984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 8293042 - 8293168
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    ||||||||||| |||||||||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| ||||| ||||||| ||||||||    
T  8293042 tatgcagattcggctgacatggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 8293141  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    |   | ||| |||||||||| ||||||    
T  8293142 actagaattcgttaatattatagggac 8293168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 349
Target Start/End: Complemental strand, 20995839 - 20995773
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaa 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||||||| ||||    
T  20995839 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaa 20995773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 412
Target Start/End: Complemental strand, 39826193 - 39826091
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||  |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  39826193 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 39826094  T
Q  410 tcg 412  Q
    |||    
T  39826093 tcg 39826091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 18462313 - 18462406
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||||||||        |  |||||||||||||||||||| |||||||||||||||||||| ||| |||||    
T  18462313 atattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttccatttttggtccctcctttca 18462406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 52058154 - 52058029
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||  |||| |||| |||||| |||| ||||  |||||||||||||| ||||| | ||||||| |||| |||||||   |||||||    
T  52058154 tatgcagattctgctgatgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacatagtctaaatctttttttttacagaaactaaaa 52058055  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| |||||||||||| ||||    
T  52058054 ccggaattcgttaatattacaaggac 52058029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 18462592 - 18462532
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtcaa 276  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18462592 tagattttgtccccgtaatttcagattcttccacttttggtctctcatttcaccacgtcaa 18462532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 430
Target Start/End: Original strand, 48072196 - 48072316
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||| |||| |||  | |||| ||||  ||| |||||||||| ||||| ||||||||| |||| |||||||||||||||||    
T  48072196 tatgcagattctgctgacgtggtgaaatgaggacccaaaagtggaagaatatgaaattacagggacataatctaaatatttttttttacaaggactaaaa 48072295  T
Q  410 tcgggatttgttaatattaca 430  Q
     ||| |||   ||||||||||    
T  48072296 ccggaattcactaatattaca 48072316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 275 - 382
Target Start/End: Complemental strand, 13229910 - 13229803
Alignment:
Q  275 aagtgagtggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaagga 374  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || |||| || | |||  || ||  |||| ||||  ||| |||||||||||| |    
T  13229910 aagtgagaggaatctgaaattacagggacgtaatttatgcagattatgttgacttgatgaaaggagtgatcaaaagtggaagaatatgaaattacaagca 13229811  T
Q  375 caaaatct 382  Q
    ||||||||    
T  13229810 caaaatct 13229803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 20995903 - 20996001
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  ||| ||||||||||  |||||||||||||| |||| ||||||| |||||||||    
T  20995903 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagagacaaaatctaaatctttt-ttttacatggactaaaa 20996001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 24467935 - 24467876
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||||||| ||||||    
T  24467935 tagattttgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtca 24467876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 311 - 430
Target Start/End: Original strand, 29696794 - 29696912
Alignment:
Q  311 atgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaat 410  Q
    |||||||||||||| || ||||  ||| |||||| |||| ||||  |||||||||||||| ||||||||||| |||||||| |||||||  ||||||||     
T  29696794 atgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatggacaaaatct-aatttttttttttacagtgactaaaac 29696892  T
Q  411 cgggatttgttaatattaca 430  Q
    ||| ||| | ||||||||||    
T  29696893 cggaattcgctaatattaca 29696912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 52058219 - 52058368
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||| | |||||||||||||||||||||||||   || || | |||  |||||| |||| ||||  |||||||||||||| ||||| |||||    
T  52058219 ggaatctgaaatcatagggacgtaatttatgcagattctg---acgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatct 52058315  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| || |||| | ||||||| |   ||| | |||||||||||||||    
T  52058316 aaatctttttttctacaggaactaaaaccaaaattcgctaatattacagggac 52058368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 275
Target Start/End: Complemental strand, 17606683 - 17606557
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt-aacnnnnnnntagattttgtccctgtaattttagattcttcca 248  Q
    |||||||||  ||||| || || || |||||||||||||||||||||||||||||| ||        |||||||||||| |||||||| |||||||||||    
T  17606683 ggttaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaagatttagattttgtccttgtaatttcagattcttcca 17606584  T
Q  249 tttttggtctctcatttcactacgtca 275  Q
     |||||||| || ||| ||| ||||||    
T  17606583 cttttggtcccttattccaccacgtca 17606557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 30299466 - 30299587
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||| || || ||||  ||| |||||| |||| ||||  ||||| |||||||| ||||||||||||||| |||| ||||||| | |||||||    
T  30299466 tatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttacaggaactaaaa 30299565  T
Q  410 tcgggatttgttaatattacag 431  Q
     ||  ||||| |||||||||||    
T  30299566 ccgaaatttgctaatattacag 30299587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 30299539 - 30299482
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||| ||| ||||    
T  30299539 tagattttgtccctgtaattttagattcttccacttttggtccctcattccaccacgt 30299482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 39711307 - 39711432
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| |||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||  ||||||||||||||| |||| ||||||| |||||||||    
T  39711307 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttttttttacagggactaaaa 39711406  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     | | ||| | |||||||||||||||    
T  39711407 ccagaattcgctaatattacagggac 39711432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 29696734 - 29696583
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||| |||||| ||||||||||||||||||| ||  || | |||  || ||| |||| ||||  ||| |||||||||  |||||||||||    
T  29696734 ggaatatgaaattatagggacataatttatgcagattctgccgatgtgatgaaaggagtgacaaaaagtggaagaatatgaaattacggggacaaaatct 29696635  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| |||||||  |||||||| ||  ||| | |||||||||||||||    
T  29696634 aaatctttt-ttttacagagactaaaaccgaaattcgctaatattacagggac 29696583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 409
Target Start/End: Complemental strand, 4907105 - 4907006
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||| |||||| ||||  ||| |||||| |||| ||||  ||| |||||||||| |||||||||||||||  ||| ||||||| |||||||||    
T  4907105 tatgcagattcggctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcattttttttacagggactaaaa 4907006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 39970789 - 39970663
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||||||||| ||||||| ||||  ||| |||||| |||| ||||  ||||||||||||||  |||||||||||||| ||||| |||||||  || ||||    
T  39970789 tatgcagattttgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacatagacaaaatctaaatcttttttttttacagagattaaa 39970690  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    || |  ||| |||||||||||| ||||    
T  39970689 attgaaattcgttaatattacatggac 39970663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 34749280 - 34749157
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| |||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||  ||||||||||||||| |||| ||||| | |||||||||    
T  34749280 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacggggacaaaatctaaatctttt-ttttatagggactaaaa 34749182  T
Q  410 tcgggatttgttaatattacaggga 434  Q
    || | ||| | ||||||||||||||    
T  34749181 tcagaattcgctaatattacaggga 34749157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 150 - 268
Target Start/End: Original strand, 42510016 - 42510136
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttcc 247  Q
    |||||||||| |||||  | || || |||||||||||||||||||||| |||||||||        |  |||||||||||||||||||| | ||||||||    
T  42510016 ggttaatactactttttatccctgtaatattagcgaattccggttttaatccctgtaaaaaaataatttagattttgtccctgtaatttcatattcttcc 42510115  T
Q  248 atttttggtctctcatttcac 268  Q
    | |||| ||| ||||||||||    
T  42510116 acttttagtccctcatttcac 42510136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 4907032 - 4907091
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||||    
T  4907032 tagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtca 4907091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 4907270 - 4907219
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  4907270 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 4907219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 24467698 - 24467749
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  24467698 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 24467749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 29696908 - 29696809
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn--tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||||||| ||||||          |||||||||||| |||||||| ||||||||||| |||||||| |||||| ||| ||||    
T  29696908 atattagcgaattccggttttagtcactgtaaaaaaaaaaattagattttgtccatgtaatttcagattcttccacttttggtccctcattccaccacgt 29696809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 30299301 - 30299352
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  30299301 tagattttgtccctgtaatttcatattcttccacttttggtctctcctttca 30299352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 257
Target Start/End: Complemental strand, 33629067 - 33628957
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt---aacnnnnnnntagattttgtccctgtaattttagattcttc 246  Q
    |||||||||  ||||| || || || ||||||||||||||||||||||||||||||   ||        | ||||||||||||||||||| |||||||||    
T  33629067 ggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattcttc 33628968  T
Q  247 catttttggtc 257  Q
    || ||||||||    
T  33628967 cacttttggtc 33628957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 435
Target Start/End: Complemental strand, 33628786 - 33628708
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||||||  ||||||||||||||| |||| ||||||  ||||||||| | | ||| | |||||||||||||||    
T  33628786 aatctgaaattacggggacaaaatctaaatctttttttttacggggactaaaaccagaattcgctaatattacagggac 33628708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 372 - 437
Target Start/End: Complemental strand, 16294129 - 16294065
Alignment:
Q  372 ggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||||||||||||||| ||| ||||||||| ||||||||||  ||| | |||||||||||||||||    
T  16294129 ggacaaaatctaaattattt-ttttacaagaactaaaatcgaaattcgctaatattacagggacca 16294065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 39826120 - 39826177
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| ||||||||||| ||||| || |||||| ||| ||||    
T  39826120 tagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgt 39826177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 39826354 - 39826313
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  39826354 tagattttgtccctgtaatttcagattcttccacttttggtc 39826313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 39970953 - 39970912
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    |||||||||||||||||||||||||| |||||| ||||||||    
T  39970953 tagattttgtccctgtaattttagatccttccacttttggtc 39970912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 42510392 - 42510335
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  |||||||| || || |||||||||||||||||||||||||| |||||    
T  42510392 ggttaataccacttttggtccctgtaatattagcgaattccggttttagtccttgtaa 42510335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 223 - 268
Target Start/End: Original strand, 52058088 - 52058133
Alignment:
Q  223 tgtccctgtaattttagattcttccatttttggtctctcatttcac 268  Q
    |||||||||||||| ||||||||||| |||||||| ||||||||||    
T  52058088 tgtccctgtaatttcagattcttccacttttggtccctcatttcac 52058133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 8293115 - 8293067
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||||||||||||||||| | ||||||||| |||||||| ||||||    
T  8293115 tagattttgtccctgtaatttcatattcttccacttttggtccctcatt 8293067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 17500909 - 17500785
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcg 412  Q
    |||||||||||||||| | |||| | |||||| |||| ||||  ||||| |||| | | |||   |||||||| ||||| |||||||  |||||||| ||    
T  17500909 gcagattctgctgacaagtttaagtgagggaccaaaagtggaataatctcaaatgatagggatggaatctaaacttttttttttacagagactaaaaccg 17500810  T
Q  413 ggatttgttaatattacagggacca 437  Q
    | ||| | |||||||||||||||||    
T  17500809 gaattcgctaatattacagggacca 17500785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 18342261 - 18342377
Alignment:
Q  317 attctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggat 416  Q
    |||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||||| | ||||| |||||||||  ||||||| ||||||||| ||  ||    
T  18342261 attctgcttacgtggtggaatgagggactaaaagtggaagaatatgaaattacaagaataaaatttaaattttt--ttttacagggactaaaaccgaaat 18342358  T
Q  417 ttgttaatattacagggac 435  Q
    | | |||||||||||||||    
T  18342359 tcgctaatattacagggac 18342377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 20995725 - 20995756
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  20995725 atattagcgaattccggttttagtccctgtaa 20995756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 39711100 - 39711131
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  39711100 atattagcgaattccggttttagtccctgtaa 39711131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 39970716 - 39970775
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||||||  |||||||| ||||||||||| |||||||| |||||| ||| ||||||    
T  39970716 tagattttgtctatgtaatttcagattcttccacttttggtccctcattccaccacgtca 39970775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 43539417 - 43539468
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||| ||| ||||| |||||||| ||| |||||    
T  43539417 tagattttgtccctgtaattttatattgttccacttttggtccctcctttca 43539468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 52058316 - 52058265
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||| |||||||||||||| ||||||||||| |||||||| ||| |||||    
T  52058316 tagattatgtccctgtaatttcagattcttccacttttggtccctcctttca 52058265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 207
Target Start/End: Original strand, 17500782 - 17500827
Alignment:
Q  162 ttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    ||||||| || || ||||||||||||||||||||||||| ||||||    
T  17500782 ttttggtccctgtaatattagcgaattccggttttagtctctgtaa 17500827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 435
Target Start/End: Original strand, 30252169 - 30252258
Alignment:
Q  346 aaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||  ||| |||||||||  ||||||||||||||| |||  ||||||| ||||||||| | | ||| | |||||||| ||||||    
T  30252169 aaaaatggaagaatatgaaattacggggacaaaatctaaatctttatttttacagggactaaaaccagaattcgctaatattatagggac 30252258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 34749207 - 34749264
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||| ||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  34749207 tagattttgtccccgtaatttcatattcttccacttttggtccctcattccaccacgt 34749264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 39711380 - 39711323
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||| ||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  39711380 tagattttgtccccgtaatttcatattcttccacttttggtccctcattccaccacgt 39711323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 30252206 - 30252158
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||||||||| ||||||| | ||||||||||||||| || ||||||    
T  30252206 tagattttgtccccgtaatttcatattcttccatttttgatccctcatt 30252158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 30780272 - 30780316
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgac 327  Q
    ||||| ||||||||||  |||||||||||| ||||||||||||||    
T  30780272 ggaatatgaaattacaatgacgtaatttatacagattctgctgac 30780316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 33628760 - 33628808
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||||||||| ||||||| |||||||| || |||||||| ||||||    
T  33628760 tagattttgtccccgtaatttcagattctttcacttttggtccctcatt 33628808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 256
Target Start/End: Complemental strand, 34749413 - 34749373
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggt 256  Q
    |||||||| |||||||||||| ||||||||||| |||||||    
T  34749413 tagattttatccctgtaatttcagattcttccacttttggt 34749373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 224 - 268
Target Start/End: Complemental strand, 42510210 - 42510166
Alignment:
Q  224 gtccctgtaattttagattcttccatttttggtctctcatttcac 268  Q
    ||||||||||||| |||||| |||| |||||||| ||||||||||    
T  42510210 gtccctgtaatttcagattcctccacttttggtccctcatttcac 42510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 99; Significance: 1e-48; HSPs: 74)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 283 - 437
Target Start/End: Complemental strand, 33290219 - 33290065
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| ||||| | | |||||||||||||||| |||||    
T  33290219 ggaatctgaaattacagggacgaaatttatgcagattctgctgacgtggttaaataagggaccaaaagtggaggagtatgaaattacaaggacagaatct 33290120  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    ||||||||||||||||| |||||||||  || ||| | |||||||||||||||||    
T  33290119 aaattttttattttacagggactaaaactggaattcgctaatattacagggacca 33290065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 275 - 435
Target Start/End: Complemental strand, 26135995 - 26135835
Alignment:
Q  275 aagtgagtggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaagga 374  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||| || | |||  |||||| |||| | ||  |||||||||||||| |||    
T  26135995 aagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacaggga 26135896  T
Q  375 caaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||||| |||| ||||||| ||||||||||||| ||| | |||||||||||||||    
T  26135895 caaaatctaaatctttttttttacagggactaaaatcggaattcgctaatattacagggac 26135835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 283 - 437
Target Start/End: Original strand, 13284616 - 13284775
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||| |||||||| |||||||||||||| |||||||| |||| ||||||||| |||||| |||| ||||| ||||||||||||||||||||||||||    
T  13284616 ggaatcttaaattacaaggacgtaatttatgtagattctgttgacgtggttaaatgagggaccaaaagtggaggaatctgaaattacaaggacaaaatct 13284715  T
Q  383 a--aatt---ttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |   |||   |||||||||||| ||||||||| ||  ||| | |||||||||||||||||    
T  13284716 atttattttattttattttacagggactaaaaccgaaattcgctaatattacagggacca 13284775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 17463261 - 17463110
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || | |||| |||||| |||| |||   || ||||||||||| |||||||||||    
T  17463261 ggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaatgagggaccaaaagtgggagaacctgaaattacagggacaaaatct 17463162  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
     |||||||| |||||||  |||||||| ||| ||| | |||||||| ||||||    
T  17463161 -aatttttttttttacagcgactaaaaccggaattcgctaatattatagggac 17463110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 42670927 - 42671053
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || | |||  |||||| |||| |||| |||| |||||||||| ||||| |||||    
T  42670927 ggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatatgaaattacagggacataatct 42671026  T
Q  383 aaattttttattttacaaggactaaaa 409  Q
    ||||  ||| ||||||| |||||||||    
T  42671027 aaatccttttttttacagggactaaaa 42671053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 26560762 - 26560915
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  || ||| |||| ||||  ||| |||||||| | |||||||||||    
T  26560762 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattatatggacaaaatct 26560861  T
Q  383 aa-attttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||  |||||| ||||||  ||||||||||||| ||| | |||||||||| ||||    
T  26560862 aatttttttttttttaccgggactaaaatcggaattcgctaatattacaaggac 26560915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 432
Target Start/End: Original strand, 22263399 - 22263550
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  22263399 ggaatctgaaattacagggacgtaatttatgcagattatgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 22263498  T
Q  383 aaa--ttttttattttacaaggactaaaatcgggatttgttaatattacagg 432  Q
     ||  |||||| |||||||  |||||||| ||| ||| | ||||||||||||    
T  22263499 gaatctttttttttttacagagactaaaaccggaattcgctaatattacagg 22263550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 23854874 - 23854999
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| | ||||||||  ||||||||||    
T  23854874 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatataaaattacagagacaaaatct 23854973  T
Q  383 aaattttttattttacaaggactaaaa 409  Q
    ||||||||| ||||||  |||||||||    
T  23854974 aaatttttt-ttttacggggactaaaa 23854999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 26560697 - 26560574
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  |||||||||||||| |||| |||||||||| |||  ||||||| |||||||||    
T  26560697 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggactaaatctaaatcttt--ttttacagggactaaaa 26560600  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||  ||| |||||||||||||||||    
T  26560599 tcgaaattcgttaatattacagggac 26560574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 12418960 - 12419084
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    |||||||||||||||||||||||||| |||||| |||| ||||| |||| |||||| || ||||| |||||||| ||||| ||||| | ||||||||| |    
T  12418960 tgcagattctgctgacatggttaaatgagggactaaaagtggaggaatcggaaatttcatggacagaatctaaacttttt-ttttatagggactaaaacc 12419058  T
Q  412 gggatttgttaatattacagggacca 437  Q
    || ||| | |||||||||||||||||    
T  12419059 ggaattcgctaatattacagggacca 12419084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 12431020 - 12431144
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    |||||||||||||||||||||||||| |||||| |||| ||||| |||| |||||| || ||||| |||||||| ||||| ||||| | ||||||||| |    
T  12431020 tgcagattctgctgacatggttaaatgagggactaaaagtggaggaatcggaaatttcatggacagaatctaaacttttt-ttttatagggactaaaacc 12431118  T
Q  412 gggatttgttaatattacagggacca 437  Q
    || ||| | |||||||||||||||||    
T  12431119 ggaattcgctaatattacagggacca 12431144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 26236297 - 26236145
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||| || | |||  |||||| |||| || |  |||||||||||||| ||||||||| |    
T  26236297 ggaatatgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaaaatat 26236198  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| || |||| ||||||||| | | ||| | |||||||||| ||||    
T  26236197 aaatctttttttatacagggactaaaaccagaattcgctaatattacaaggac 26236145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 26236330 - 26236454
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||||||||  |||||||||||||| ||||||||||||||| |||| |||| ||||||||||||    
T  26236330 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatctgaaattacagggacaaaatctaaatctttt-ttttccaaggactaaaa 26236428  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||  ||| | |||||||||||||||    
T  26236429 ccgaaattcgctaatattacagggac 26236454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 17850794 - 17850946
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  17850794 ggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaagagggaccaaaagtggaagaatctgaaattacagggacaaaatct 17850893  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||   |||  ||||||  |||||||| ||  ||| | |||||||||||||||    
T  17850894 aaagcattttatttacagtgactaaaaccgaaattcgctaatattacagggac 17850946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 39878272 - 39878120
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||| || | |||  || ||| |||| ||||  ||||||||||||||   ||| |||||    
T  39878272 ggaatatgaaattacagggacgtaatttatgcagattttgctgacttgatgaaaggagtgaccaaaagtggaagaatctgaaattacagatacataatct 39878173  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| | || ||||||| ||||||||| ||| ||| | |||||||||| ||||    
T  39878172 aaatatctttttttacagggactaaaaccggaattcgctaatattacaaggac 39878120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 427
Target Start/End: Original strand, 20498980 - 20499097
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||  |||| |||| | |||| |||| || |  |||||||||||||| ||||||||||||||| |||| |||||||  ||||||||    
T  20498980 tatgcagattctgctgatgtggtgaaatgaaggaccaaaagtgaaagaatctgaaattacagggacaaaatctaaatctttttttttacagtgactaaaa 20499079  T
Q  410 tcgggatttgttaatatt 427  Q
     ||| |||||||||||||    
T  20499080 ccggaatttgttaatatt 20499097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 30959909 - 30960033
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    ||||||||||||| ||| |||||||  |||||  |||| ||||| ||| |||||||||| ||||| |||||||| ||||| ||||||| ||||||||| |    
T  30959909 tgcagattctgctaacagggttaaacgagggattaaaagtggaggaatatgaaattacagggacataatctaaacttttt-ttttacatggactaaaacc 30960007  T
Q  412 gggatttgttaatattacagggacca 437  Q
    || ||| | |||||||||||||||||    
T  30960008 ggaattcgctaatattacagggacca 30960033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 283 - 383
Target Start/End: Complemental strand, 23806122 - 23806022
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||| |||||||||||| || | |||  |||||| |||| ||||  ||||| |||||||| || ||||||||    
T  23806122 ggaatctgaaattacagggacgtaatttatgcggattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctaaaattacaggggcaaaatct 23806023  T
Q  383 a 383  Q
    |    
T  23806022 a 23806022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 433
Target Start/End: Original strand, 17463326 - 17463449
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| |||||||  ||| |||||  |||| ||||  ||| || ||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  17463326 tatgcagattctgcttacatggtggaatgagggatcaaaagtggaagaatatgcaattacagggacaaaatctaaatctttttttttacagggactaaaa 17463425  T
Q  410 tcgggatttgttaatattacaggg 433  Q
     ||| ||| | |||||||||||||    
T  17463426 ccggaattcgctaatattacaggg 17463449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 15106302 - 15106425
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| ||||||| ||||  ||| |||||  |||| ||||  |||||||||||||| |||||||||||||||||||  ||||||| |||||||||    
T  15106302 tatgcagattttgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaattttt--ttttacagggactaaaa 15106399  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||  ||| | ||||||||| |||||    
T  15106400 tcgaaattcgctaatattacggggac 15106425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 17850729 - 17850605
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  ||| |||||  |||| ||||  ||||| ||||||||  |||||||||||||| |||| ||||| | |||||||||    
T  17850729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatcttaaattacagagacaaaatctaaatctttt-ttttatagggactaaaa 17850631  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||| ||| | |||||||||||||||    
T  17850630 tcggaattcgctaatattacagggac 17850605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 19251705 - 19251829
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||| |||| ||||||  ||| ||||  ||| |||||||||||||||| ||||||||| |||| ||||||| |||||||||    
T  19251705 tatgcagattctgctgacgtggtgaaatgagggaccgaaagtggaagaatatgaaattacaaggacagaatctaaatctttt-ttttacagggactaaaa 19251803  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| |||   |||||||||| ||||    
T  19251804 ccggaattcactaatattacaaggac 19251829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 23806187 - 23806312
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| ||| ||||||| ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  23806187 tatgcaaattttgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 23806286  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||  ||| | |||||||||||||||    
T  23806287 ccgaaattcgctaatattacagggac 23806312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 30390602 - 30390477
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| |||| || ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||| |||||| ||||||| ||| |||||    
T  30390602 tatgcagattttgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaattttttttttttacagggattaaaa 30390503  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||| ||| | |||||||||| ||||    
T  30390502 tcggaattcgctaatattacatggac 30390477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 15106237 - 15106085
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||| ||||| |||||||||  |||||| || | |||  |||||| |||| ||||  ||||| |||||||| |||||||||||    
T  15106237 ggaatctgaaattacaaggacttaattgatgcagatttagctgacgtgatgaaaggagggaccaaaagtggaataatctaaaattacagggacaaaatct 15106138  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| ||| ||||| ||  ||| | ||||||||| |||||    
T  15106137 aaatctttttatttacagggattaaaaccgaaattcgctaatattacggggac 15106085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 19251640 - 19251489
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||| | || ||||||||| | ||||||||||  || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  19251640 ggaatttgaaattacaagaacataatttatgtatattctgctgatgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 19251541  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||  ||| | |||||||||||||||    
T  19251540 aaatctttt-ttttacagggactaaaaccgaaattcgctaatattacagggac 19251489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 13284790 - 13284733
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||| || || ||||||||||||| ||||||||||||||||||    
T  13284790 ggttaatactgcttttggtccctgtaatattagcgaatttcggttttagtccctgtaa 13284733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 22263334 - 22263253
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaatttttt 391  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  ||| |||||||||| ||||||||||||||| ||||    
T  22263334 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttt 22263253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 26236403 - 26236346
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||| ||| ||||    
T  26236403 tagattttgtccctgtaatttcagattcttccatttttggtccctcattccaccacgt 26236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 321 - 435
Target Start/End: Complemental strand, 42670851 - 42670735
Alignment:
Q  321 tgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaa--attttttattttacaaggactaaaatcgggattt 418  Q
    ||||||| ||||  |||||||||| |||| ||||  ||| ||||||||||||||||||||||||   |||||| ||||||| ||||||||| ||| |||     
T  42670851 tgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaattttttttttttttacagggactaaaaccggaattc 42670752  T
Q  419 gttaatattacagggac 435  Q
    | || ||||||||||||    
T  42670751 gctactattacagggac 42670735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 13254593 - 13254541
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||||||||||||||| |||||||||||| ||| |||||    
T  13254593 aatctgaaattacaaggacaaaatctaaatcttttattttacagggagtaaaa 13254541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 21481141 - 21481017
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcg 412  Q
    ||||||||||||||  || |||| | || ||| |||| ||||  ||||| |||| |  |||||| |||||||||||||| |||||||||||||||||  |    
T  21481141 gcagattctgctgatgtgtttaattgagagactaaaagtggaagaatctaaaatgatgaggacataatctaaatttttttttttacaaggactaaaactg 21481042  T
Q  413 ggatttgttaatattacagggacca 437  Q
    | ||| |||||||||||| ||||||    
T  21481041 gaattcgttaatattacaaggacca 21481017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 283 - 430
Target Start/End: Complemental strand, 20498915 - 20498770
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||| |  ||||||||||||||||||||| ||||| || | |||  |||||| |||| ||||  ||||||||| |||| ||||| |||||    
T  20498915 ggaatatgaaattatattgacgtaatttatgcagattctactgacgtgataaaaggagggaccaaaagtggaagaatctgaaa-tacagggacataatct 20498817  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    |||| |||| ||||||| ||||||||| ||  ||| | ||||||||||    
T  20498816 aaatatttt-ttttacagggactaaaaccgtaattcgctaatattaca 20498770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 161 - 275
Target Start/End: Complemental strand, 15106431 - 15106316
Alignment:
Q  161 cttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnnt-agattttgtccctgtaattttagattcttccatttttggtctc 259  Q
    ||||| || ||||| ||||||||||||| || |||||||||||||||        | |||||||||||||||||||| ||||||||||| ||||| || |    
T  15106431 cttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcagattcttccacttttgatccc 15106332  T
Q  260 tcatttcactacgtca 275  Q
    ||||| ||| ||||||    
T  15106331 tcattccaccacgtca 15106316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 361 - 435
Target Start/End: Complemental strand, 23854780 - 23854706
Alignment:
Q  361 tgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||| ||  ||| | |||||||||||||||    
T  23854780 tgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccgaaattcgctaatattacagggac 23854706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 150 - 276
Target Start/End: Complemental strand, 33290424 - 33290297
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt-aacnnnnnnntagattttgtccctgtaattttagattcttcca 248  Q
    ||||||||| ||||||||| || || |||||||||||||| ||||||| ||||||| ||        ||||||||| || |||||||| | |||||||||    
T  33290424 ggttaataccgcttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaaaattagattttgaccttgtaatttcatattcttcca 33290325  T
Q  249 tttttggtctctcatttcactacgtcaa 276  Q
     |||||||| || ||||||| |||||||    
T  33290324 cttttggtccctaatttcaccacgtcaa 33290297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 33290050 - 33290107
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||| ||||||| || || ||||||||||||||| ||||||||||||||||    
T  33290050 ggttaatactgtttttggtccctgtaatattagcgaattccagttttagtccctgtaa 33290107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 437
Target Start/End: Original strand, 33290284 - 33290409
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| |  |||| |||| |||| |||||| |||| ||||  ||| ||||||||||||| ||||||||||  ||||| ||||||| ||| |||||    
T  33290284 tatgcagatttttttgacgtggtgaaattagggaccaaaagtggaagaatatgaaattacaaggtcaaaatctaa--ttttttttttacagggattaaaa 33290381  T
Q  410 tcgggatttgttaatattacagggacca 437  Q
     | | ||| | |||||||||||||||||    
T  33290382 ccagaattcgctaatattacagggacca 33290409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 15106137 - 15106188
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||| ||||| |||||||| ||| |||||    
T  15106137 tagattttgtccctgtaattttagattattccacttttggtccctcctttca 15106188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 17850894 - 17850843
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  17850894 tagattttgtccctgtaatttcagattcttccacttttggtccctcttttca 17850843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 150 - 267
Target Start/End: Original strand, 19251472 - 19251591
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttcc 247  Q
    |||||||||  ||||| || || || ||||||||||||| ||||||||||||||||||        |  |||||||||||||||||||| | ||||||||    
T  19251472 ggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 19251571  T
Q  248 atttttggtctctcatttca 267  Q
    | |||||||| ||| |||||    
T  19251572 acttttggtccctcctttca 19251591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 23806022 - 23806073
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||| ||||||||||||||||||||||| |||||||| ||| |||||    
T  23806022 tagattttgcccctgtaattttagattcttccacttttggtccctcctttca 23806073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 23806260 - 23806201
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||||    
T  23806260 tagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtca 23806201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 12419099 - 12419046
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccct 203  Q
    |||||||||  |||||||| || || ||||||||||||||||||||||||||||    
T  12419099 ggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 12431159 - 12431106
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccct 203  Q
    |||||||||  |||||||| || || ||||||||||||||||||||||||||||    
T  12431159 ggttaataccacttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 17463119 - 17463212
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn--tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||| ||||||          ||||||||||||||||||||| || |||| ||| |||||||| |||||||||    
T  17463119 atattagcgaattccggttttagtcgctgtaaaaaaaaaaattagattttgtccctgtaatttcaggttctcccacttttggtccctcatttca 17463212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 30390529 - 30390586
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  30390529 tagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgt 30390586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 30958685 - 30958742
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  |||||||| || || ||||||||||||| ||||||||||||||||||    
T  30958685 ggttaataccacttttggtccctgtaatattagcgaatttcggttttagtccctgtaa 30958742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 30960048 - 30959991
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  |||||||| || || |||||||||||||||||||||||||| |||||    
T  30960048 ggttaataccacttttggtccctgtaatattagcgaattccggttttagtccatgtaa 30959991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 13284716 - 13284656
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtcaa 276  Q
    |||||||||||| |||||||| |||||| |||| |||||||| ||||||| || |||||||    
T  13284716 tagattttgtccttgtaatttcagattcctccacttttggtccctcatttaaccacgtcaa 13284656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 20499053 - 20499001
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcac 268  Q
    ||||||||||||||||||||| |||||||| || ||||||||  |||||||||    
T  20499053 tagattttgtccctgtaatttcagattctttcacttttggtccttcatttcac 20499001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 283 - 319
Target Start/End: Original strand, 30390635 - 30390671
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagatt 319  Q
    ||||||||||||||||||||| |||||||||||||||    
T  30390635 ggaatctgaaattacagggacataatttatgcagatt 30390671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Complemental strand, 17463442 - 17463411
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  17463442 atattagcgaattccggttttagtccctgtaa 17463411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 17850656 - 17850715
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||| ||||||||| ||||||||||| ||||| || |||||| ||| ||||||    
T  17850656 tagattttgtctctgtaatttaagattcttccacttttgatccctcattccaccacgtca 17850715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 22263261 - 22263320
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| | ||||||||| |||||||| || ||| ||| ||||||    
T  22263261 tagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtca 22263320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 23854974 - 23854923
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||| ||||||||||| ||||||||| |||||||| ||| |||||    
T  23854974 tagattttgtctctgtaattttatattcttccacttttggtccctcctttca 23854923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 26135887 - 26135938
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||| | |||||||| ||| |||||    
T  26135887 tagattttgtccctgtaatttcagattcttctacttttggtccctcctttca 26135938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 435
Target Start/End: Original strand, 26136103 - 26136177
Alignment:
Q  361 tgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||||||||| |||||||||||||| ||||| |||||| |||||||||| ||  ||| |||||||||||| ||||    
T  26136103 tgaaattacaatgacaaaatctaaatcttttttttttac-aggactaaaaccgaaattcgttaatattacaaggac 26136177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 26560624 - 26560683
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||| ||||||||||||| ||||||||||| |||||||| || ||| ||| ||||||    
T  26560624 tagatttagtccctgtaatttcagattcttccacttttggtcccttattccaccacgtca 26560683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 39878129 - 39878160
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  39878129 atattagcgaattccggttttagtccctgtaa 39878160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 262
Target Start/End: Complemental strand, 21482188 - 21482142
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctca 262  Q
    |||||||||||||||| |||||||||||||||| |||| ||| ||||    
T  21482188 tagattttgtccctgtcattttagattcttccacttttagtccctca 21482142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 437
Target Start/End: Original strand, 21482144 - 21482241
Alignment:
Q  339 agggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||||| |||| ||||  ||||| |||| ||| |||||||||||||| | ||| |||||||||||||||||  || ||| | ||||||||||| |||||    
T  21482144 agggactaaaagtggaagaatctaaaatgacagggacaaaatctaaactattt-ttttacaaggactaaaactggaattcgctaatattacagagacca 21482241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 22263498 - 22263448
Alignment:
Q  217 agattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  22263498 agattttgtccctgtaatttcatattcttccacttttggtccctcctttca 22263448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 411
Target Start/End: Original strand, 34548707 - 34548760
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    |||||| ||||||||||||||||||||||| |||| ||||| | |||||||||||    
T  34548707 aatctgtaattacaaggacaaaatctaaatctttt-ttttatatggactaaaatc 34548760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Complemental strand, 13254733 - 13254692
Alignment:
Q  227 cctgtaattttagattcttccatttttggtctctcatttcac 268  Q
    |||||||||| ||||||||||| |||||||| ||||||||||    
T  13254733 cctgtaatttcagattcttccacttttggtccctcatttcac 13254692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 23854689 - 23854746
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  ||||| || || || ||||||||||||| ||||||||||||||||||    
T  23854689 ggttaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaa 23854746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 314 - 391
Target Start/End: Complemental strand, 36359182 - 36359105
Alignment:
Q  314 cagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaatttttt 391  Q
    ||||||||||||||||| || ||| |||||  |||| ||||   || ||| ||||||||||||||||||||| |||||    
T  36359182 cagattctgctgacatgttttaatgagggataaaaagtggaagtatatgatattacaaggacaaaatctaaacttttt 36359105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 375
Target Start/End: Original strand, 39878337 - 39878402
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggac 375  Q
    |||||||||||||||| | |||| |||| |||||| |||| || | ||||||||||||||| ||||    
T  39878337 tatgcagattctgctggcgtggtgaaatgagggaccaaaagtgaaaaaatctgaaattacagggac 39878402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 42670718 - 42670775
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  ||||| || || || ||| ||||||||||||||||||||||||||||    
T  42670718 ggttaatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaa 42670775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 316 - 435
Target Start/End: Original strand, 13254677 - 13254796
Alignment:
Q  316 gattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaaatcggg 414  Q
    ||||||||| |  |||| |||| |||||| |||| ||||  |||||||||||||| |||  |||| ||||| ||||| |||||||  |||||||| |||     
T  13254677 gattctgcttatgtggtgaaatgagggaccaaaagtggaagaatctgaaattaca-ggattaaatttaaatcttttttttttacagagactaaaaccgga 13254775  T
Q  415 atttgttaatattacagggac 435  Q
    ||| | |||||||||||||||    
T  13254776 attcgctaatattacagggac 13254796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 26236200 - 26236248
Alignment:
Q  219 attttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||||||||||||| |||||||| || |||||||| ||| |||||    
T  26236200 attttgtccctgtaatttcagattctttcacttttggtccctcctttca 26236248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 30958823 - 30958700
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcg 412  Q
    |||||||||||||||| | |||| | | |||| |||| ||||  ||||| |||| | | |||  ||||||||| ||||| ||||||| ||||||||| ||    
T  30958823 gcagattctgctgacaagtttaagtgatggaccaaaagtggaagaatctcaaatgatagggatgaaatctaaacttttt-ttttacagggactaaaaccg 30958725  T
Q  413 ggatttgttaatattacagggacca 437  Q
      ||| | |||||||||||||||||    
T  30958724 aaattcgctaatattacagggacca 30958700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 361 - 409
Target Start/End: Complemental strand, 34548665 - 34548618
Alignment:
Q  361 tgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  34548665 tgaaattacatggacaaaatctaaatctttt-ttttacagggactaaaa 34548618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 315 - 399
Target Start/End: Original strand, 44098862 - 44098946
Alignment:
Q  315 agattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttaca 399  Q
    |||||||||||||| | |||| | | ||||  ||| ||||  |||||||||||||| ||||| |||||||||| ||| |||||||    
T  44098862 agattctgctgacaagtttaagtgaaggactcaaagtggaagaatctgaaattacagggacataatctaaattattttttttaca 44098946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 2e-35; HSPs: 71)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 29444976 - 29444824
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| | ||  ||| |||||||||||||||| |||||    
T  29444976 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtagaagaatatgaaattacaaggacataatct 29444877  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||  ||| ||||||| ||||||||||| | ||| |||||||||||||||||    
T  29444876 aaatccttttttttacagggactaaaatcagaattcgttaatattacagggac 29444824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 283 - 434
Target Start/End: Original strand, 7126125 - 7126276
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  7126125 ggaatatgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 7126224  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacaggga 434  Q
    |||| |||| |||||||| |||||||| ||| ||| | ||||||||||||||    
T  7126225 aaatctttttttttacaaagactaaaaccggaattcgctaatattacaggga 7126276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 27159165 - 27159314
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | ||| ||||||| |||||||||  ||| | |||||||| |||||||||||    
T  27159165 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaaatggaagaatataaaattacagggacaaaatct 27159264  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||   ||||||||||||||||| ||  ||| | |||||||||| ||||    
T  27159265 aaatttt---ttttacaaggactaaaaccgaaattcgctaatattacaaggac 27159314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 14144071 - 14143920
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| || | |||| ||| || |||| ||||  ||| |||||||||| |||||||||||    
T  14144071 ggaatctgaaattacagggacgtaatttatgcagattctactgacgtgatgaaatgaggtaccaaaagtggaagaatatgaaattacagggacaaaatct 14143972  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  14143971 aaatctttt-ttttacagggactaaaaccggaattcgctaatattacagggac 14143920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 14411867 - 14411715
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| || | |||  |||||| |||| ||||  ||||||||||||||  |||||||| |    
T  14411867 ggaatctgaaattacagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacatagacaaaatat 14411768  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| || |||| ||||||||| ||| ||| | |||||||||||||||    
T  14411767 aaatctttttttatacagggactaaaaccggaattcgctaatattacagggac 14411715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 17762452 - 17762301
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||||||||||||||||||||||||||||| || || |||||  |||||| |||| ||||  |||||||||||||| | ||||||| |    
T  17762452 ggaatatgaaattacagggacgtaatttatgcagattctgcttacgtgattaaaggagggaccaaaagtggaagaatctgaaattacaggaacaaaatat 17762353  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  17762352 aaatctttt-ttttacagggactaaaaccggaattcgctaatattacagggac 17762301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 993954 - 994080
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||| | |||  |||||| |||| ||||  |||||| ||||||| |||||||||||    
T  993954 ggaatctgaaattacagggacgtaatttatacagattctgttgacatgataaaaggagggaccaaaagtggaagaatctgcaattacagggacaaaatct 994053  T
Q  383 aaattttttattttacaaggactaaaa 409  Q
    |||| ||||||| |||| |||||||||    
T  994054 aaatcttttattctacagggactaaaa 994080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 284 - 435
Target Start/End: Complemental strand, 18336637 - 18336485
Alignment:
Q  284 gaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatcta 383  Q
    |||||||||||||||||||||||||||||||| ||||||||||  || | |||  |||||  ||||  |||  |||||||||||||| ||||||||||||    
T  18336637 gaatctgaaattacagggacgtaatttatgcaaattctgctgatgtgatgaaaggagggatcaaaagcggaagaatctgaaattacagggacaaaatcta 18336538  T
Q  384 aat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||| ||||| ||||||| ||||||||||||| ||| | |||||||| ||||||    
T  18336537 aatcttttttttttacagggactaaaatcggaattcgctaatattatagggac 18336485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 275 - 435
Target Start/End: Original strand, 24837369 - 24837529
Alignment:
Q  275 aagtgagtggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaagga 374  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||| || | |||  |||||  |||| | ||  ||| |||||||||| |||    
T  24837369 aagtgagaggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggagcaaaagtagaagaatttgaaattacaggga 24837468  T
Q  375 caaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||||| |||| ||||||| |||||||||  || ||| | |||||||||||||||    
T  24837469 caaaatctaaatctttttttttacagggactaaaactggaattcgctaatattacagggac 24837529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 14144136 - 14144257
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||| |||| ||||  |||||||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  14144136 tatgcagattctggtgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 14144235  T
Q  410 tcgggatttgttaatattacag 431  Q
    |||| ||| |||||||||||||    
T  14144236 tcggaattcgttaatattacag 14144257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 23979136 - 23979261
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||| |||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  23979136 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 23979235  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  23979236 ccggaattcgctaatattacagggac 23979261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 31799848 - 31799999
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||| |||||||||||||||||| ||||||||||| || | |||  |||||  ||||  |||  |||||||||||||| |||||||||||    
T  31799848 ggaatctgaaattaaagggacgtaatttatgcaaattctgctgacgtgatgaaaggagggatcaaaagaggaagaatctgaaattacatggacaaaatct 31799947  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| |||||| |||||||||| ||| ||| | |||||||| ||||||    
T  31799948 aaatctttttttttac-aggactaaaaccggaattcgctaatattatagggac 31799999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 284 - 435
Target Start/End: Complemental strand, 24074472 - 24074321
Alignment:
Q  284 gaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatcta 383  Q
    |||||||||||||  ||||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| ||||||||||  |||||||||||    
T  24074472 gaatctgaaattatggggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatcta 24074373  T
Q  384 aattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||| |||| ||||||| ||||||||| ||  ||| | |||||||||| ||||    
T  24074372 aatatttttttttacagggactaaaaccgaaattcgctaatattacatggac 24074321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 24074537 - 24074636
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||||||||||||||| |||| ||||  ||| |||||||||||||||||||||||||| |||| ||||||| ||| |||||    
T  24074537 tatgcagattctgctgacgtggttaaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggattaaaa 24074636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 310 - 432
Target Start/End: Complemental strand, 7126060 - 7125939
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  |||||||||||| | ||||||||||||||| |||| ||||||| |||||||||    
T  7126060 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatctttt-ttttacagggactaaaa 7125962  T
Q  410 tcgggatttgttaatattacagg 432  Q
    |||| ||| | ||||||||||||    
T  7125961 tcggaattcgctaatattacagg 7125939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 410
Target Start/End: Original strand, 6817329 - 6817456
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||  || | |||  || ||| |||| ||||  ||| |||||||||| |||||||||||    
T  6817329 ggaatttgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatct 6817428  T
Q  383 aaattttttattttacaaggactaaaat 410  Q
    ||||||||| |||||||  |||||||||    
T  6817429 aaatttttttttttacagagactaaaat 6817456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 289 - 435
Target Start/End: Original strand, 41001567 - 41001712
Alignment:
Q  289 tgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattt 388  Q
    ||||||||||| ||| ||||||||| || ||||| |||| || | |||  |||||| |||| ||||  |||||||||||| | ||||||||||||||| |    
T  41001567 tgaaattacagtgacataatttatgtaggttctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattatagggacaaaatctaaatct 41001666  T
Q  389 tttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||| ||||||||||||||||| ||| ||| | |||||||||||||||    
T  41001667 ttt-ttttacaaggactaaaaccggaattcgctaatattacagggac 41001712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 20709420 - 20709571
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||| |||||||||||| ||||||||||  || | |||  | |||| |||| ||||  ||| |||||||||| |||||||||||    
T  20709420 ggaatctgaaattacagggatgtaatttatgcatattctgctgatgtgatgaaaggaaggacaaaaagtggaagaatatgaaattacatggacaaaatct 20709519  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| |   ||| |||||||||||| ||||    
T  20709520 aaatctttt-ttttacagggactaaaaccaaaattcgttaatattacatggac 20709571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 289 - 431
Target Start/End: Original strand, 24650913 - 24651055
Alignment:
Q  289 tgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattt 388  Q
    |||||||||||||| ||||||||||| |||||||||||| || | |||  |||||  |||| ||||  ||||| |||||||| ||| |||||||| ||||    
T  24650913 tgaaattacagggatgtaatttatgcggattctgctgacgtgatgaaaggagggatcaaaagtggaagaatctaaaattacagggataaaatctagattt 24651012  T
Q  389 tttattttacaaggactaaaatcgggatttgttaatattacag 431  Q
    | | ||||||| ||||||||| ||| ||| | |||||||||||    
T  24651013 tcttttttacatggactaaaaccggaattcgctaatattacag 24651055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 6817265 - 6817141
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||| |||| |||||| |||| ||||  |||||||||||||| ||||| ||||||||| |||| ||||||| |||||||||    
T  6817265 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacatggacataatctaaatctttt-ttttacagggactaaaa 6817167  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| |||   |||||||||| ||||    
T  6817166 ccggaattcactaatattacaaggac 6817141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 435
Target Start/End: Complemental strand, 24837308 - 24837187
Alignment:
Q  314 cagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgg 413  Q
    ||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||||||||||||||||||| |||| ||||||| ||||||||| |||    
T  24837308 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaaccgg 24837209  T
Q  414 gatttgttaatattacagggac 435  Q
     ||| | || ||||||||||||    
T  24837208 aattcgctattattacagggac 24837187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 29445041 - 29445165
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| ||| | ||||| ||||  |||||||||| |||| ||||  |||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  29445041 tatgcaaattttactgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttac-aggactaaaa 29445139  T
Q  410 tcgggatttgttaatattacagggac 435  Q
      || ||| | |||||||||||||||    
T  29445140 ctggaattcgctaatattacagggac 29445165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 428
Target Start/End: Original strand, 14411901 - 14412018
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||| |||||||||| || ||||  ||| |||||| |||  ||||  ||||||||||||||||||||||||||||||||||| ||||||| |||||||||    
T  14411901 tatgtagattctgcttacgtggtggaatgagggaccaaacgtggaagaatctgaaattacaaggacaaaatctaaatttttt-ttttacagggactaaaa 14411999  T
Q  410 tcgggatttgttaatatta 428  Q
     ||  ||| ||||||||||    
T  14412000 ccgaaattcgttaatatta 14412018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 435
Target Start/End: Original strand, 18336698 - 18336815
Alignment:
Q  317 attctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggat 416  Q
    |||||||| |||||||  |||||||||  |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||||| ||||||||| ||| ||    
T  18336698 attctgcttacatggtgtaataagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaat 18336797  T
Q  417 ttgttaatattacagggac 435  Q
    | | |||| ||||||||||    
T  18336798 tcgctaat-ttacagggac 18336815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 435
Target Start/End: Complemental strand, 31799776 - 31799658
Alignment:
Q  317 attctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggat 416  Q
    |||||||| || ||||  |||||||||| |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||||| ||||| ||| ||| ||    
T  31799776 attctgcttacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacagggactgaaaccggaat 31799677  T
Q  417 ttgttaatattacagggac 435  Q
    | | |||||||| ||||||    
T  31799676 tcgctaatattatagggac 31799658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 427
Target Start/End: Original strand, 4919198 - 4919341
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||| |||||||||||||||| |||||| |||| || | |||  |||||  |||| | ||  |||||||||||||| |||||||||||    
T  4919198 ggaatatgaaattacaaggacgtaatttatgcatattctgttgacttgatgaaaggagggatcaaaagtagaagaatctgaaattacagggacaaaatct 4919297  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatatt 427  Q
     |||||||| ||||||| | ||||||| ||| ||| | |||||||    
T  4919298 -aatttttttttttacaggaactaaaaccggaattcgctaatatt 4919341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 27159305 - 27159224
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||| |||||||||||| |||||        ||||||||||||||||||||||| ||||||||||||||||||    
T  27159305 atattagcgaatttcggttttagtccttgtaaaaaaaatttagattttgtccctgtaattttatattcttccatttttggtc 27159224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 283 - 430
Target Start/End: Original strand, 22571285 - 22571432
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||| |||||||||||||||||||||||||||||||| || |||| |||| |||| |||||  ||||   ||  ||| |||||||||| | |||||||||    
T  22571285 ggaacctgaaattacagggacgtaatttatgcagattttgttgacgtggtgaaatgagggagcaaaacgagaagaatttgaaattacatgaacaaaatct 22571384  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    || |||||| || || || |||||||| ||  ||| | ||||||||||    
T  22571385 aattttttttttatataaagactaaaaccgaaattcgctaatattaca 22571432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 176 - 275
Target Start/End: Complemental strand, 23979252 - 23979150
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacg 272  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||| | ||||||||| |||||||| |||||||||| |||    
T  23979252 atattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacg 23979153  T
Q  273 tca 275  Q
    |||    
T  23979152 tca 23979150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 314 - 437
Target Start/End: Complemental strand, 41424655 - 41424532
Alignment:
Q  314 cagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgg 413  Q
    |||||| |||||||||| |||||| |||||| |||| ||||  |||||||||| ||| ||||| |||||||| ||||| ||||||||||||  ||| |||    
T  41424655 cagattttgctgacatgtttaaatgagggactaaaagtggaagaatctgaaatgacagggacagaatctaaacttttttttttacaaggacctaaaccgg 41424556  T
Q  414 gatttgttaatattacagggacca 437  Q
     ||| | ||||||| || ||||||    
T  41424555 aattcgctaatattgcaaggacca 41424532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 391
Target Start/End: Original strand, 20959330 - 20959407
Alignment:
Q  314 cagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaatttttt 391  Q
    ||||||||||| |||||||||||| |  ||| |||| ||||| ||||||||||| || ||||||||||||||||||||    
T  20959330 cagattctgctaacatggttaaatgaacgaccaaaagtggaggaatctgaaattgcagggacaaaatctaaatttttt 20959407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 993777 - 993874
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||||||||||||||        ||||||| |||| |||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  993777 atattagcgaattccggttttagtccctgtaaaaaaaaattagatttagtccttgtaatttcatattcttccacttttggtccctcattccaccacgt 993874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 176 - 257
Target Start/End: Original strand, 41001383 - 41001464
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||| ||||||||||||||||||        ||||||||||||||||||||| | ||||||||| ||||||||    
T  41001383 atattagcgaatttcggttttagtccctgtaaaaaaaaattagattttgtccctgtaatttcatattcttccacttttggtc 41001464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 993890 - 993772
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| ||||||||||||||| ||||||||   |||| ||||||| |||||||||    
T  993890 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggactaaatctaa---tttttttttacagggactaaaa 993794  T
Q  410 tcgggatttgttaatattacag 431  Q
     ||| ||| | |||||||||||    
T  993793 ccggaattcgctaatattacag 993772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 435
Target Start/End: Complemental strand, 22571206 - 22571095
Alignment:
Q  324 tgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaa 423  Q
    |||| |||| |||| |||||| |||| ||||  ||| ||||||||||  || | |||||||||||||| ||||||| ||||||||||||| ||| | |||    
T  22571206 tgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacagagatataatctaaatttttttttttacagggactaaaatcggaattcgctaa 22571107  T
Q  424 tattacagggac 435  Q
    ||||||| ||||    
T  22571106 tattacaaggac 22571095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 409
Target Start/End: Complemental strand, 30512430 - 30512332
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| |||| ||||||||||||||| |||| ||||||||||  ||| ||||||| |||||||||    
T  30512430 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatccttt-ttttacagggactaaaa 30512332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 409
Target Start/End: Complemental strand, 30552770 - 30552672
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| |||| ||||||||||||||| |||| ||||||||||  ||| ||||||| |||||||||    
T  30552770 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaaaaatctgaaattacagggaccaaatctaaatccttt-ttttacagggactaaaa 30552672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 41001496 - 41001374
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| |||||||  ||| | |||| |||| ||||  ||| |||||||||| |||||||||||||   |||| ||||||| |||||||||    
T  41001496 tatgcagattctgcttacatggtggaatgaaggaccaaaagtggaagaatatgaaattacagggacaaaatctaa---tttttttttacagggactaaaa 41001400  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||  ||| | |||||||||||||||    
T  41001399 ccgaaattcgctaatattacagggac 41001374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 396
Target Start/End: Complemental strand, 20709355 - 20709269
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttatttt 396  Q
    |||||||||||||||||| |||| |||| |||||| |||| ||||  ||| |||||||||| ||||| ||||||||| |||| ||||    
T  20709355 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatttgaaattacagggacagaatctaaatcttttttttt 20709269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 6817150 - 6817251
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||| ||||||||||||||||||||||||        |  ||||| ||||| |||||||| ||||||||||| |||||||| |||||||||| ||||    
T  6817150 atattagtgaattccggttttagtccctgtaaaaaaaagatttagattatgtccatgtaatttcagattcttccacttttggtccctcatttcaccacgt 6817249  T
Q  274 ca 275  Q
    ||    
T  6817250 ca 6817251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 14143929 - 14144022
Alignment:
Q  176 atattagcgaattccggttttagtccctgt--aacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||||||  ||        ||||||||||||||||||||| | ||||||||| |||||||  |||||||||    
T  14143929 atattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtacctcatttca 14144022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 17762517 - 17762642
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| |||||||| || ||||  ||| |||||| |||| ||||  ||||||||||||   ||||||||||||||| |||| ||||||| |||||||||    
T  17762517 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattatggggacaaaatctaaatctttttttttacagggactaaaa 17762616  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     | | ||| | ||||| |||||||||    
T  17762617 ccagaattcgctaatactacagggac 17762642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 321 - 437
Target Start/End: Original strand, 41425697 - 41425814
Alignment:
Q  321 tgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaa-ttttttattttacaaggactaaaatcgggatttg 419  Q
    |||||||||| |||||| |||||| ||| |||||  |||||||||| ||| ||| | |||||||| |||||| |||||||||||| |||||| | ||| |    
T  41425697 tgctgacatgtttaaatgagggactaaagatggaagaatctgaaatgacagggatagaatctaaactttttttttttacaaggaccaaaatcagaattcg 41425796  T
Q  420 ttaatattacagggacca 437  Q
     | ||||| |||||||||    
T  41425797 ctgatattgcagggacca 41425814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 20709282 - 20709341
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||| |||||||||||||| | ||||||||| |||||||| |||||||||| ||||||    
T  20709282 tagattctgtccctgtaatttcaaattcttccacttttggtccctcatttcaccacgtca 20709341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 4919133 - 4919011
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||||| |||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| ||||| ||||||| | ||||||    
T  4919133 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaa 4919034  T
Q  409 atcgggatttgttaatattacag 431  Q
    | ||  ||| | |||||||||||    
T  4919033 accgaaattcgctaatattacag 4919011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 4919060 - 4919117
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  4919060 tagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgt 4919117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 7125945 - 7126046
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||||| |||||||||||||||        |  ||||||||||||| |||||| ||||||||||| |||||||| || ||| ||| ||||    
T  7125945 atattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtccctataatttcagattcttccacttttggtcccttattccaccacgt 7126044  T
Q  274 ca 275  Q
    ||    
T  7126045 ca 7126046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 391
Target Start/End: Complemental strand, 27159133 - 27159052
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaatttttt 391  Q
    |||| ||||| ||||||| ||||  |||||||||| |||| ||||  |||||||||||||| ||||||||| ||||| ||||    
T  27159133 tatgtagattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatttaaatctttt 27159052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 28071735 - 28071860
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaa-attttttattttacaaggactaaaatc 411  Q
    |||||||||||||||  | |||| | ||||||  ||| ||||  |||||||||||||||||| | |||||||  |||||| |||||||| |||||||| |    
T  28071735 gcagattctgctgactggtttaagtgagggacctaaagtggaagaatctgaaattacaaggatataatctaatttttttttttttacaatgactaaaacc 28071834  T
Q  412 gggatttgttaatattacagggacca 437  Q
    |  ||| | | |||||||||||||||    
T  28071835 gaaattcgctcatattacagggacca 28071860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 31799710 - 31799751
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  31799710 tagattttgtccctgtaatttcagattcttccacttttggtc 31799751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 41001703 - 41001610
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||||||||||||||||||||| |||||        |  ||||||||||||| |||||| ||||||||||| |||||||| ||| |||||    
T  41001703 atattagcgaattccggttttagtccttgtaaaaaaaagatttagattttgtccctataatttcagattcttccacttttggtccctcctttca 41001610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 254
Target Start/End: Complemental strand, 18336805 - 18336726
Alignment:
Q  178 attagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatttttg 254  Q
    ||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||||||||| |||||    
T  18336805 attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttg 18336726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 27159063 - 27159119
Alignment:
Q  219 attttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||||||||||||| ||||||||||| |||||||| || ||| ||| ||||||    
T  27159063 attttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtca 27159119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 6817429 - 6817378
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  6817429 tagattttgtccctgtaatttcatattcttccacttttggtcactcctttca 6817378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 7126225 - 7126174
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  7126225 tagattttgtccctgtaatttcatattcttccacttttggtccctcctttca 7126174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 14144209 - 14144150
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| | ||||||||| |||||||| || ||| ||| ||||||    
T  14144209 tagattttgtccctgtaatttcaaattcttccacttttggtcccttattccaccacgtca 14144150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 17762310 - 17762341
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  17762310 atattagcgaattccggttttagtccctgtaa 17762341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 24651007 - 24650956
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||| |||||||||||||||||||||||| ||||| || ||| |||||    
T  24651007 tagattttatccctgtaattttagattcttccacttttgatccctcctttca 24650956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 29445114 - 29445055
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||||||| |||||||| ||||||||||| |||||||| || ||| ||| ||||||    
T  29445114 tagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtca 29445055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 206
Target Start/End: Original strand, 14411724 - 14411754
Alignment:
Q  176 atattagcgaattccggttttagtccctgta 206  Q
    |||||||||||||||||||||||||||||||    
T  14411724 atattagcgaattccggttttagtccctgta 14411754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 276
Target Start/End: Original strand, 22571078 - 22571207
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt---aacnnnnnnntagattttgtccctgtaattttagattcttc 246  Q
    ||||||||||| |||| || |  || |||||||||||||||| |||||||||||||   ||        |||||| | || ||||||||| | |||||||    
T  22571078 ggttaatactgatttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattcttc 22571177  T
Q  247 catttttggtctctcatttcactacgtcaa 276  Q
    || |||||||| |||||||||| |||||||    
T  22571178 cacttttggtccctcatttcaccacgtcaa 22571207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 994054 - 994013
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||||||||||  ||||||||||| ||||||||    
T  994054 tagattttgtccctgtaattgcagattcttccacttttggtc 994013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 14411974 - 14411917
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||| |||||||| |||||||||||  ||||||| |||||| ||| ||||    
T  14411974 tagattttgtccttgtaatttcagattcttccacgtttggtccctcattccaccacgt 14411917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Original strand, 17762464 - 17762505
Alignment:
Q  224 gtccctgtaattttagattcttccatttttggtctctcattt 265  Q
    |||||||||||||||||||| |||| |||||||| |||||||    
T  17762464 gtccctgtaattttagattcctccacttttggtccctcattt 17762505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 17762590 - 17762533
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||  |||||| ||||||||||| |||||||| |||||| ||| ||||    
T  17762590 tagattttgtccccataatttcagattcttccacttttggtccctcattccaccacgt 17762533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 265
Target Start/End: Complemental strand, 24650896 - 24650855
Alignment:
Q  224 gtccctgtaattttagattcttccatttttggtctctcattt 265  Q
    ||||||||||||| |||||| ||||||||||||| |||||||    
T  24650896 gtccctgtaatttcagattcctccatttttggtccctcattt 24650855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 24837239 - 24837296
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||| |||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  24837239 tagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgt 24837296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 313 - 409
Target Start/End: Complemental strand, 28070604 - 28070510
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||| |||||||| | |||| | ||||||  ||| ||||  |||||||||||||||||||| ||||||||  |||  ||||||| |||||||||    
T  28070604 gcagattatgctgacaagtttaagtgagggactcaaagtggaagaatctgaaattacaaggacagaatctaaaccttt--ttttacagggactaaaa 28070510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 30512357 - 30512414
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||| ||||||||||||| ||||| ||||| |||||||| |||||| ||| ||||    
T  30512357 tagatttggtccctgtaatttcagatttttccacttttggtccctcattccaccacgt 30512414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 30552697 - 30552754
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||| ||||||||||||| ||||| ||||| |||||||| |||||| ||| ||||    
T  30552697 tagatttggtccctgtaatttcagatttttccacttttggtccctcattccaccacgt 30552754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 370
Target Start/End: Original strand, 6817277 - 6817313
Alignment:
Q  334 aaataagggacgaaaaatggagaaatctgaaattaca 370  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  6817277 aaataagggaccaaaaatggaggaatctgaaattaca 6817313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 2e-35; HSPs: 90)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 5800775 - 5800623
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||||||||  ||| |||||||||| ||||| |||||    
T  5800775 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatggaagaatatgaaattacagggacataatct 5800676  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||  ||| ||||||| ||||||||| ||  ||| |||||||||||||||||    
T  5800675 aaatccttttttttacagggactaaaaccgaaattcgttaatattacagggac 5800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 14262244 - 14262396
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  14262244 ggaatctaaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggactaaaagtggaacaatatgaaattacagggacaaaatct 14262343  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  14262344 aaatctttttttttacagggactaaaaccggaattcgctaatattacagggac 14262396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 16722161 - 16722009
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||| || | ||| ||||||| |||| ||||  |||||||||||||| |||||||||||    
T  16722161 ggaatctgaaattacagtgacataatttatgcagattctgttgacttgatgaaagaagggaccaaaagtggaagaatctgaaattacatggacaaaatct 16722062  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||||||| |||||||  |||||||| ||| ||| | |||||||||||||||    
T  16722061 aaatttttttttttacagtgactaaaaccggaattcgctaatattacagggac 16722009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 19112973 - 19113125
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| || | |||  |||||| |||| | ||  |||||||||||||| ||| |||||||    
T  19112973 ggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggataaaatct 19113072  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||| ||| |||||||||| ||||||    
T  19113073 aaatctttttttttacagggactaaaaccggaattcgttaatattatagggac 19113125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 45003666 - 45003514
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  45003666 ggaatctgaaattacaaggacgtaatttatacagattctgttgacgtgatgaaaggagggacaaaaagtggaagaatctgaaattacagggacaaaatct 45003567  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||||||||| | ||||| ||| ||| ||||| ||||||||| |||||    
T  45003566 aaatcttttattttatagggactgaaaccggaatttgctaatattacggggac 45003514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 45970085 - 45969933
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || | |||  || ||| |||| || |  |||||||||||||| |||||||||||    
T  45970085 ggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagagaccaaaagtgaaagaatctgaaattacagggacaaaatct 45969986  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||| |||   |||||||||||||||    
T  45969985 aaatctttttttttacagggactaaaaccggaattcactaatattacagggac 45969933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 283 - 434
Target Start/End: Complemental strand, 38283720 - 38283569
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||| || | |||  |||||  |||| ||||  ||| |||||||| | | |||||||||    
T  38283720 ggaatcttaaattacagggacgtaacttatgtagattctgctgacgtgatgaaaggagggatcaaaagtggaacaatatgaaattataggaacaaaatct 38283621  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacaggga 434  Q
    ||||||||| ||||||||||||||||| ||| ||| ||||||||||||||||    
T  38283620 aaatttttttttttacaaggactaaaaccggaattcgttaatattacaggga 38283569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 52552896 - 52553022
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| ||||||||||  ||||||||||    
T  52552896 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagagacaaaatct 52552995  T
Q  383 aaattttttattttacaaggactaaaa 409  Q
    |||| |||| ||||||| |||||||||    
T  52552996 aaatctttttttttacagggactaaaa 52553022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 14262179 - 14262054
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||  ||||  |||||||||| |||| ||||  |||||||||||||| ||||||||||||||| |||| |||||||||||||||||    
T  14262179 tatgcagattctgctgatgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttttttttacaaggactaaaa 14262080  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  14262079 ccggaattcgctaatattacagggac 14262054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 14162041 - 14161889
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| |||||||||| ||||| |||||    
T  14162041 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacataatct 14161942  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||| | | |||||||  || ||| | |||||||||||||||    
T  14161941 aaatctttttttttataggaactaaaactggaattcgctaatattacagggac 14161889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 30500249 - 30500400
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||| |||||||||| ||||| ||||||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  30500249 ggaatctgaaattacagggatgtaatttatgtagattttgctgacgtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatct 30500348  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||||||| ||||||| |||||||||  || ||| | |||||||||||||||    
T  30500349 aaatttttt-ttttacagggactaaaactggaattcgctaatattacagggac 30500400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 307 - 434
Target Start/End: Original strand, 43572623 - 43572749
Alignment:
Q  307 atttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggacta 406  Q
    ||||| ||||||||||||||| |||| |||| |||||| |||| ||||  |||||||||||||| ||||| |||||||||||||| ||||||| | ||||    
T  43572623 atttacgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacagaatctaaatttttt-ttttacaggaacta 43572721  T
Q  407 aaatcgggatttgttaatattacaggga 434  Q
    ||| ||| |||||| |||||||||||||    
T  43572722 aaaccggaatttgtcaatattacaggga 43572749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 283 - 409
Target Start/End: Complemental strand, 21633066 - 21632940
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || | |||  |||||| |||| || |  |||||||||||||| |||||| ||||    
T  21633066 ggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtgaaagaatctgaaattacagggacaacatct 21632967  T
Q  383 aaattttttattttacaaggactaaaa 409  Q
    | || |||| ||||||| |||||||||    
T  21632966 agatctttttttttacagggactaaaa 21632940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 11003902 - 11003750
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||| ||||| ||| || |||| || | |||  | |||| |||| ||||  ||||||||||||||||||||||||||    
T  11003902 ggaatctgaaattacagggacgtaattgatgcatattttgttgacttgatgaaaggatggaccaaaagtggaagaatctgaaattacaaggacaaaatct 11003803  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    || | ||||  |||||| ||||||||| ||| ||| | |||||||||| ||||    
T  11003802 aagtctttttatttacagggactaaaaccggaattcggtaatattacaaggac 11003750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 14171794 - 14171946
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| || ||||||| ||||||||| ||||||| || | |||  | |||| |||| ||||  |||| ||||||||| |||||||||||    
T  14171794 ggaatctgaaattacaaggtcgtaattgatgcagattttgctgacgtgatgaaaggaaggaccaaaagtggaagaatcagaaattacagggacaaaatct 14171893  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| ||||||||| ||| ||| | |||||||||||||||    
T  14171894 aaatctttttatttacagggactaaaaccggaattcgctaatattacagggac 14171946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 20853904 - 20854055
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||| ||| ||||||||||||||| || |||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  20853904 ggaatctgaaattacagtgacataatttatgcagattatgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 20854003  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| |||||| |||||||||| ||  ||| | |||||||||| ||||    
T  20854004 aaatctttttttttac-aggactaaaaccgaaattcgctaatattacatggac 20854055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 33372576 - 33372424
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||| ||||| ||||||||| ||||||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  33372576 ggaatctgaaattacaaggacttaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaataatctgaaattacagggacaaaatct 33372477  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| | ||||||| | | ||| | |||||||||||||||    
T  33372476 aaatctttttatttacaggaactaaaaccagaattcgctaatattacagggac 33372424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 432
Target Start/End: Complemental strand, 15328630 - 15328484
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || | |||  ||||||  ||| ||||  ||| |||||||||| |||||||||||    
T  15328630 ggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaagagggacacaaactggaagaatatgaaattacagggacaaaatct 15328531  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagg 432  Q
    ||   |||| ||||||| ||||||||| ||  ||||  ||||||||||||    
T  15328530 aa---tttttttttacagggactaaaaacgaaatttactaatattacagg 15328484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 283 - 432
Target Start/End: Complemental strand, 43572561 - 43572410
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgac---atggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaa 379  Q
    ||||| |||||||||||||||||||||  ||||||||||||||||   ||| | |||  |||||| |||| ||||  |||||||||||||| ||||||||    
T  43572561 ggaatatgaaattacagggacgtaattg-tgcagattctgctgacttgatgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaa 43572463  T
Q  380 tctaaattttttattttacaaggactaaaatcgggatttgttaatattacagg 432  Q
    |||||||||||  ||||||| ||||||||| ||  ||| | ||||||||||||    
T  43572462 tctaaatttttctttttacagggactaaaaccgaaattcgctaatattacagg 43572410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 14162106 - 14162230
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| ||| ||||||| ||||  |||||||||| |||| ||||  |||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  14162106 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctctt-ttttacagggactaaaa 14162204  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  14162205 ccggaattcgctaatattacagggac 14162230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 30500184 - 30500062
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  ||| |||||||||| |||||||||||||||||||  ||||||| |||||||||    
T  30500184 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaattttt--ttttacagggactaaaa 30500087  T
Q  410 tcgggatttgttaatattacaggga 434  Q
     ||  ||| | ||||||||||||||    
T  30500086 ccgaaattcgctaatattacaggga 30500062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 52552835 - 52552708
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaa--ttttttattttacaaggactaa 407  Q
    |||||||||||||||||||||||  |||||||||  |||| ||||  |||||||||||||| ||||||||||||||  | |||| |||||||  ||||||    
T  52552835 tatgcagattctgctgacatggtggaataagggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatctatttttttttacagagactaa 52552736  T
Q  408 aatcgggatttgttaatattacagggac 435  Q
    |||||  ||||| |||||||| ||||||    
T  52552735 aatcgaaatttgctaatattagagggac 52552708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 310 - 396
Target Start/End: Original strand, 15328695 - 15328781
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttatttt 396  Q
    |||||||||||||||||| ||||  |||||||||| |||| |||| ||||||||||||||| ||||||||||||||| |||| ||||    
T  15328695 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaaaaatctgaaattacagggacaaaatctaaatcttttttttt 15328781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 287 - 433
Target Start/End: Original strand, 17649222 - 17649367
Alignment:
Q  287 tctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat 386  Q
    |||||||||||||||||||||||||||||||||||| |||| || | |||  || ||| |||  ||||  |||||||||||||| |||||||||||||||    
T  17649222 tctgaaattacagggacgtaatttatgcagattctgttgacttgataaaaggagagaccaaatgtggaataatctgaaattacagggacaaaatctaaat 17649321  T
Q  387 tttttattttacaaggactaaaatcgggatttgttaatattacaggg 433  Q
     |||| |||| || | ||||||| ||| ||| | || ||||||||||    
T  17649322 ctttt-ttttccaggaactaaaaccggaattcgctagtattacaggg 17649367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 295 - 435
Target Start/End: Original strand, 35995898 - 35996035
Alignment:
Q  295 tacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttatt 394  Q
    |||| |||||||||||||||||||||||| ||| || | ||| ||||||| |||| ||||  |||||||||||||   |||||| |||||   |||| ||    
T  35995898 tacaaggacgtaatttatgcagattctgcggacgtgatgaaagaagggaccaaaagtggaagaatctgaaattactgagacaaattctaa---ttttttt 35995994  T
Q  395 ttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||| ||||||||||||| ||| | |||||||||||||||    
T  35995995 ttacagggactaaaatcggaattcgctaatattacagggac 35996035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 47575480 - 47575605
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||  ||||||||||||||||||||||| || | |||  || ||| |||| | || |||||||||||||||  ||||||||||    
T  47575480 ggaatttgaaattacagggatataatttatgcagattctgctgacgtgatgaaaggagagaccaaaagttgaaaaatctgaaattacagagacaaaatct 47575579  T
Q  383 aaattttttattttacaaggactaaaa 409  Q
     |||||||| ||||||| |||||||||    
T  47575580 -aatttttttttttacagggactaaaa 47575605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 9267118 - 9266993
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || || |  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  9267118 tatgcagattctgcttacgtgctggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 9267019  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  9267018 ccggaattcgctaatattacagggac 9266993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 16722226 - 16722351
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| |||||||  |||||||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| || |||| |||||||||    
T  16722226 tatgcagattctgcttacatggtggaataagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttgtacagggactaaaa 16722325  T
Q  410 tcgggatttgttaatattacagggac 435  Q
      |  ||| | |||||||||||||||    
T  16722326 ctgaaattcgctaatattacagggac 16722351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 275 - 435
Target Start/End: Complemental strand, 49986706 - 49986545
Alignment:
Q  275 aagtgagtggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaagga 374  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||  | |  || | |||  || ||| |||| | ||  |||||||||||||| |||    
T  49986706 aagtgagaggaatctgaaattacaaggacgtaatttatgcagattctattaaattgatgaaaggagagaccaaaagtagaagaatctgaaattacaggga 49986607  T
Q  375 caaaatctaaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||||| ||||| |||||||  |||||||| ||| |||   |||||||||||||||    
T  49986606 caaaatctaaatcttttttttttacagtgactaaaaccggaattctctaatattacagggac 49986545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 9267183 - 9267334
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||| |||||||||||||||||| |||| || | |||  |||||| |||| | ||  ||||||| |||||| |||||||||||    
T  9267183 ggaatctgaaattacaaggacttaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgatattacagggacaaaatct 9267282  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||   |||| | |||| ||||||||||||| ||| | |||||||||| ||||    
T  9267283 aaaaaattta-tatacagggactaaaatcggaattcgctaatattacaaggac 9267334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 19112908 - 19112782
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    ||||||||||||||| || ||||  |||||||||| |||| ||||  ||| ||||||| || ||||||||||||||| ||||| ||||||| ||||||||    
T  19112908 tatgcagattctgcttacgtggtggaataagggaccaaaagtggaagaatatgaaattccagggacaaaatctaaatcttttttttttacagggactaaa 19112809  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    | ||| ||| | |||||||||| ||||    
T  19112808 accggaattcgctaatattacatggac 19112782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 437
Target Start/End: Original strand, 32998371 - 32998494
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    |||| ||||||||||||||||||||  |||||| |||| ||||| |||||||||||||| ||||| |||||||| ||||  ||||||| | ||||| | |    
T  32998371 tgcaaattctgctgacatggttaaacgagggactaaaagtggaggaatctgaaattacagggacagaatctaaactttt--ttttacaggaactaacacc 32998468  T
Q  412 gggatttgttaatattacagggacca 437  Q
     | ||| | |||||||||||||||||    
T  32998469 agaattcgctaatattacagggacca 32998494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 4204851 - 4204727
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||| |||| |||||| |||| ||||  |||||||||||||| ||||| ||||||||| |||| ||||||| | |||||||    
T  4204851 tatgcagattctgctgacgtggtgaaatgagggaccaaaagtggaagaatctgaaattacagggacataatctaaatctttt-ttttacaggaactaaaa 4204753  T
Q  410 tcgggatttgttaatattacagggac 435  Q
      |  |||  ||||||||||||||||    
T  4204752 ctgaaattcattaatattacagggac 4204727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 5800840 - 5800964
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| ||| ||||||  ||||  |||||||||| |||| ||||  ||| |||||||||||||||||||||||||| |||| ||||||| ||||| |||    
T  5800840 tatgcaaattttgctgaagtggtggaataagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggact-aaa 5800938  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  5800939 ccggaattcgctaatattacagggac 5800964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 150 - 262
Target Start/End: Original strand, 35740818 - 35740931
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt-aacnnnnnnntagattttgtccctgtaattttagattcttcca 248  Q
    |||||||||| |||||||| || || ||||||||||||||||||||||||||| || ||        ||||||||||||||||||||||| |||||||||    
T  35740818 ggttaatactacttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaagtttagattttgtccctgtaattttaaattcttcca 35740917  T
Q  249 tttttggtctctca 262  Q
     |||| ||| ||||    
T  35740918 cttttagtccctca 35740931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 361 - 435
Target Start/End: Complemental strand, 19720425 - 19720351
Alignment:
Q  361 tgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||| ||||||||||||||| |||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  19720425 tgaaattacagggacaaaatctaaatctttttttttacagggactaaaaccggaattcgctaatattacagggac 19720351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 36991036 - 36990922
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt--aacnnnnnnntagattttgtccctgtaattttagattcttcc 247  Q
    |||||||||| |||||||| || || ||||||||||||| ||||||||||||||||  ||        |||||| |||||||||||||||||||||||||    
T  36991036 ggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttcc 36990937  T
Q  248 atttttggtctctca 262  Q
    | |||| ||| ||||    
T  36990936 acttttagtccctca 36990922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 150 - 262
Target Start/End: Complemental strand, 37016476 - 37016362
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt--aacnnnnnnntagattttgtccctgtaattttagattcttcc 247  Q
    |||||||||| |||||||| || || ||||||||||||| ||||||||||||||||  ||        |||||| |||||||||||||||||||||||||    
T  37016476 ggttaatactacttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagtttagattctgtccctgtaattttagattcttcc 37016377  T
Q  248 atttttggtctctca 262  Q
    | |||| ||| ||||    
T  37016376 acttttagtccctca 37016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 392
Target Start/End: Original strand, 38283785 - 38283867
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaatttttta 392  Q
    |||||||||||||||||| || | ||||||||||  |||| ||||  |||||||||||| | |||||||||||||||||||||    
T  38283785 tatgcagattctgctgacgtgatgaaataagggatcaaaagtggaagaatctgaaattatagggacaaaatctaaatttttta 38283867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 14171729 - 14171605
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  ||| |||||  |||| ||||  ||| |||||||||| ||||||||||||||| |||| |||||||   | |||||    
T  14171729 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatttgaaattacagggacaaaatctaaatctttt-ttttacagaaattaaaa 14171631  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||| ||| | |||||||||||||||    
T  14171630 tcggaattcgctaatattacagggac 14171605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 21633131 - 21633256
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||| || || ||||  ||| |||||| |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||| | |||||||||    
T  21633131 tatgcagattcttcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaa 21633230  T
Q  410 tcgggatttgttaatattacagggac 435  Q
      |  ||| | |||||||||||||||    
T  21633231 ctgaaattcgctaatattacagggac 21633256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 4204778 - 4204837
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||| |||||||||||||| ||||||||||| |||||||| |||||||||| ||||||    
T  4204778 tagattatgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtca 4204837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 275
Target Start/End: Complemental strand, 14162247 - 14162120
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgt--aacnnnnnnntagattttgtccctgtaattttagattcttcc 247  Q
    |||||||||  ||||| || || || ||||||||||||||||||||||||||||||  ||        |||||||||||| |||||||| ||||||||||    
T  14162247 ggttaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaagagatttagattttgtccttgtaatttcagattcttcc 14162148  T
Q  248 atttttggtctctcatttcactacgtca 275  Q
    | |||||||| || ||| ||| ||||||    
T  14162147 acttttggtcccttattccaccacgtca 14162120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 43572699 - 43572640
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||| |||||||||||||| ||||||||||| |||||||| |||||||||| ||||||    
T  43572699 tagattctgtccctgtaatttcagattcttccacttttggtccctcatttcaccacgtca 43572640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 21633204 - 21633147
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||| ||| ||||    
T  21633204 tagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgt 21633147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 33372640 - 33372764
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||  ||||  |||| ||||  |||||||||||||| ||||||||||||||| |||| ||| ||| | |||||||    
T  33372640 tatgcagattctgctgacgtggtggaatg-gggatcaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttaacaggaactaaaa 33372738  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||  ||| | ||||||||| |||||    
T  33372739 tcgaaattcgctaatattacggggac 33372764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 35995748 - 35995805
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| ||||||||||| |||||||| |||||| ||| ||||    
T  35995748 tagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgt 35995805  T

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Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 264
Target Start/End: Original strand, 9267002 - 9267093
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||| | ||||||||| |||||||| ||||||    
T  9267002 atattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctcatt 9267093  T

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Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 17465575 - 17465691
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||| ||||||||||||| | ||| || |||| || | |||  |||||| |||| || |  ||||| || ||||| ||||||||| |    
T  17465575 ggaatctgaaattacagagacgtaatttatgtaaattttgttgacgtgatgaaaggagggaccaaaagtgaaagaatctaaagttacagggacaaaattt 17465674  T
Q  383 aaattttttattttaca 399  Q
    |||| ||||||||||||    
T  17465675 aaatattttattttaca 17465691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 20854004 - 20853953
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  20854004 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 20853953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 30500070 - 30500170
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt-agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtc 274  Q
    ||||||||||||| ||||||||||||||||||        | |||||||||||||||||||| | ||||||||| |||||||| || ||| ||| |||||    
T  30500070 atattagcgaatttcggttttagtccctgtaaaaaaaaatttagattttgtccctgtaatttcatattcttccacttttggtcccttattccaccacgtc 30500169  T
Q  275 a 275  Q
    |    
T  30500170 a 30500170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 385
Target Start/End: Complemental strand, 35995821 - 35995746
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaa 385  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  |||||||||||||| ||||||||||||||    
T  35995821 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaa 35995746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 43572459 - 43572510
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  43572459 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 43572510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 45969985 - 45970036
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| |||||||| || |||||||||||| |||||    
T  45969985 tagattttgtccctgtaatttcagattctttcacttttggtctctcctttca 45970036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 49986598 - 49986649
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||| | |||||||||||| |||||    
T  49986598 tagattttgtccctgtaatttcagattcttctacttttggtctctcctttca 49986649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 437
Target Start/End: Original strand, 36990924 - 36991021
Alignment:
Q  339 agggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||||| |||| ||||  ||||| |||||||| ||||| |||||||| ||||| ||||||| ||||||||| ||  ||| | |||||||||||||||||    
T  36990924 agggactaaaagtggaagaatctaaaattacagggacagaatctaaacttttt-ttttacagggactaaaaccgaaattcgctaatattacagggacca 36991021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 437
Target Start/End: Original strand, 37016364 - 37016461
Alignment:
Q  339 agggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||||| |||| ||||  ||||| |||||||| ||||| |||||||| ||||| ||||||| ||||||||| ||  ||| | |||||||||||||||||    
T  37016364 agggactaaaagtggaagaatctaaaattacagggacagaatctaaacttttt-ttttacagggactaaaaccgaaattcgctaatattacagggacca 37016461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 49986763 - 49986888
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattt-tttattttacaaggactaaa 408  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| ||||||||||| |||||||||||||||| ||| ||||||| | ||||||    
T  49986763 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaa-gacaaaatctaaatttcttttttttacaggaactaaa 49986861  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    | ||  ||| | ||||||||| |||||    
T  49986862 accgaaattcgctaatattactgggac 49986888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 257
Target Start/End: Complemental strand, 14171937 - 14171853
Alignment:
Q  176 atattagcgaattccggttttagtccctgta---acnnnnnnntagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    |||||||||||||||||||||||||||||||   |        |||||||||||||||||||||  |||||||||| ||||||||    
T  14171937 atattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattcttccacttttggtc 14171853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 14262106 - 14262147
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  14262106 tagattttgtccctgtaatttcagattcttccacttttggtc 14262147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 35740955 - 35740833
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcg 412  Q
    ||||||||||||||  || || | | |||||| |||| ||||  ||| | |||||||| |||||||||||||| |||||  |||||  ||||||||| ||    
T  35740955 gcagattctgctgatgtgttttattgagggactaaaagtggaagaatttaaaattacagggacaaaatctaaacttttt--tttacggggactaaaaccg 35740858  T
Q  413 ggatttgttaatattacagggacca 437  Q
    | ||| | |||||||||||||||||    
T  35740857 gaattcgctaatattacagggacca 35740833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 35741961 - 35741904
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  |||||||| || || ||||||||||||||| ||||||||||||||||    
T  35741961 ggttaataccacttttggtccctgtaatattagcgaattccagttttagtccctgtaa 35741904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 45003731 - 45003855
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||| | |||| |||||||||| |||| ||||||| | |||||||    
T  45003731 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggactaaatctaaatctttt-ttttacaggaactaaaa 45003829  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||  ||| | |||||||||||||||    
T  45003830 ccgaaattcgctaatattacagggac 45003855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 45003566 - 45003626
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtcaa 276  Q
    ||||||||||||||||||||| ||||||||||| |||| ||| ||| |||||  |||||||    
T  45003566 tagattttgtccctgtaatttcagattcttccactttttgtccctcctttcatcacgtcaa 45003626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 5800675 - 5800726
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||| |||||||||||||| | |||||||||||||||||| ||| |||||    
T  5800675 tagattatgtccctgtaatttcatattcttccatttttggtccctcctttca 5800726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 14171656 - 14171715
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| | ||||||||| ||||| || |||||| ||| ||||||    
T  14171656 tagattttgtccctgtaatttcaaattcttccacttttgatccctcattccaccacgtca 14171715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Complemental strand, 14262387 - 14262356
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  14262387 atattagcgaattccggttttagtccctgtaa 14262356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 15328768 - 15328709
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| || ||| ||| ||||||    
T  15328768 tagattttgtccctgtaatttcagatttttccacttttggtcccttattccaccacgtca 15328709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 19112791 - 19112822
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  19112791 atattagcgaattccggttttagtccctgtaa 19112822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 19720360 - 19720391
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  19720360 atattagcgaattccggttttagtccctgtaa 19720391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Complemental strand, 27946216 - 27946185
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  27946216 atattagcgaattccggttttagtccctgtaa 27946185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 33372476 - 33372527
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||| ||||| |||||||| ||| |||||    
T  33372476 tagattttgtccctgtaatttcagattattccacttttggtccctcctttca 33372527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 386
Target Start/End: Original strand, 45058731 - 45058802
Alignment:
Q  315 agattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat 386  Q
    |||||| ||| |||||||  |||||||||  |||||||||  ||||||||||||||  ||||||||||||||    
T  45058731 agattcggcttacatggtggaataagggatcaaaaatggaagaatctgaaattacagagacaaaatctaaat 45058802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 435
Target Start/End: Original strand, 45970197 - 45970276
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||||||||| ||||||||| ||||| ||||| ||||||| ||||||||| ||  |||   |||||||||||||||    
T  45970197 aatctgaaattacagggacaaaatttaaatcttttttttttacagggactaaaaccgaaattcactaatattacagggac 45970276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 273
Target Start/End: Original strand, 17465449 - 17465495
Alignment:
Q  227 cctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||| ||||||||||||||||| ||||||||| ||| ||||    
T  17465449 cctgtaatttcagattcttccatttttgatctctcattccaccacgt 17465495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 20853839 - 20853713
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||||||||||| || || ||||  ||| |||||| |||| ||||  ||| |||||||| | ||||||||||||||| ||||| ||||||| ||  ||||    
T  20853839 tatgcagattctacttacgtggtggaatgagggaccaaaagtggaagaatatgaaattatagggacaaaatctaaatcttttttttttacagggtttaaa 20853740  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    | ||  ||| | |||||||||||||||    
T  20853739 accgaaattcgctaatattacagggac 20853713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 254
Target Start/End: Complemental strand, 33372712 - 33372674
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttg 254  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  33372712 tagattttgtccctgtaatttcagattcttccacttttg 33372674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 206
Target Start/End: Original strand, 35995705 - 35995735
Alignment:
Q  176 atattagcgaattccggttttagtccctgta 206  Q
    |||||||||||||||||||||||||||||||    
T  35995705 atattagcgaattccggttttagtccctgta 35995735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 254
Target Start/End: Complemental strand, 45058799 - 45058761
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttg 254  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  45058799 tagattttgtctctgtaatttcagattcttccatttttg 45058761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 216 - 254
Target Start/End: Original strand, 52552762 - 52552800
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttg 254  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  52552762 tagattttgtccctgtaatttcagattcttccacttttg 52552800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 11003802 - 11003843
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    |||||||||||| |||||||| ||||||||||| ||||||||    
T  11003802 tagattttgtccttgtaatttcagattcttccacttttggtc 11003843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Original strand, 16722061 - 16722102
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    |||||||||||| |||||||| ||||||||||| ||||||||    
T  16722061 tagattttgtccatgtaatttcagattcttccacttttggtc 16722102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 16722299 - 16722258
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||||||||||| | ||||||||| ||||||||    
T  16722299 tagattttgtccctgtaatttcatattcttccacttttggtc 16722258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 17465672 - 17465615
Alignment:
Q  219 attttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtcaa 276  Q
    ||||||||||||||| ||||||||||| || |||||||| ||| |||||  |||||||    
T  17465672 attttgtccctgtaactttagattctttcacttttggtccctcctttcatcacgtcaa 17465615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 261
Target Start/End: Complemental strand, 17649318 - 17649273
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctc 261  Q
    ||||||||||||||||||||| ||||| |||||  |||||||||||    
T  17649318 tagattttgtccctgtaatttcagattattccacatttggtctctc 17649273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 20853766 - 20853823
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||| |||||| | ||||||||| |||||||| |||||| ||| ||||    
T  20853766 tagattttgtccctataatttcatattcttccacttttggtccctcattccaccacgt 20853823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 219 - 256
Target Start/End: Complemental strand, 45970220 - 45970183
Alignment:
Q  219 attttgtccctgtaattttagattcttccatttttggt 256  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  45970220 attttgtccctgtaatttcagattcttccacttttggt 45970183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 150 - 202
Target Start/End: Complemental strand, 3426025 - 3425973
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccc 202  Q
    |||||||||  |||||||  || || |||||||||||||||||||||||||||    
T  3426025 ggttaatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 283 - 327
Target Start/End: Original strand, 4204916 - 4204960
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgac 327  Q
    |||||||||||||| | ||| |||||||||||||||||| |||||    
T  4204916 ggaatctgaaattatatggatgtaatttatgcagattctactgac 4204960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 35741867 - 35741946
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    ||||| |||| ||| ||||| |||||||| ||||| ||||||| |||||||||  || ||| | |||||||||||||||||    
T  35741867 aatctaaaatgacagggacataatctaaacttttt-ttttacagggactaaaactggaattcgctaatattacagggacca 35741946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 2e-34; HSPs: 71)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 38879932 - 38880081
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||||||||||||||||||||||||||| |||| |||| |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  38879932 ggaatatgaaattacagggacgtaatttatgcagattctgttgacttggtgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 38880031  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||||||| |||   || |||||||| ||| ||||| |||||||||||||||    
T  38880032 aaatttttttttt---aaagactaaaaccggaatttgctaatattacagggac 38880081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 28218371 - 28218523
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||| ||||||||| || |||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  28218371 ggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 28218470  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| ||||||||| ||| ||| | |||||||||||||||    
T  28218471 aaatctttttatttacagggactaaaaccggaattcgctaatattacagggac 28218523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 41600166 - 41600318
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  41600166 ggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 41600265  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| ||||||||| ||| ||| | |||||||||||||||    
T  41600266 aaatctttttatttacagggactaaaaccggaattcgctaatattacagggac 41600318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 283 - 430
Target Start/End: Original strand, 12006748 - 12006895
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  12006748 ggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 12006847  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    |||| ||||  |||||| ||||||||||||| ||| | ||||||||||    
T  12006848 aaatctttttatttacagggactaaaatcggaattcgctaatattaca 12006895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 20419744 - 20419897
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||||||| ||||| || |||| || | |||  |||||| |||| | ||  |||||||||||||| |||||||||||    
T  20419744 ggaatctgaaattacaaggacgtaatttatgaagattttgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatct 20419843  T
Q  383 aaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||| ||||||| ||||||||| ||| ||| |||||||||||||||||    
T  20419844 aaatcttttttttttacagggactaaaaccggaattcgttaatattacagggac 20419897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 283 - 409
Target Start/End: Original strand, 25772539 - 25772665
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| || | |||  |||||| |||| | ||  |||||||||||||| |||||||||||    
T  25772539 ggaatctgaaattacaaggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatct 25772638  T
Q  383 aaattttttattttacaaggactaaaa 409  Q
    |||| |||| ||||||| |||||||||    
T  25772639 aaatctttttttttacagggactaaaa 25772665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 6466024 - 6465873
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||| ||||||||||||||||| ||||| || | |||  |||||| |||| ||||  |||||||||||||||| ||| |||||    
T  6466024 ggaatttgaaattacagggacataatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacaagaacataatct 6465925  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||| ||| | |||||||||| ||||    
T  6465924 aaatatttt-ttttacagggactaaaaccggaattcgctaatattacatggac 6465873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 20458834 - 20458710
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||||||||||||||  |||||||||||||||||||| |||||| |||||||||    
T  20458834 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagcgacaaaatctaaatttttta-tttacagggactaaaa 20458736  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| |||||||||||||||||    
T  20458735 ccggaattcgttaatattacagggac 20458710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 283 - 408
Target Start/End: Original strand, 20458899 - 20459024
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||| |||||| |||| || | |||  |||||| |||| ||||  ||||||||||||||  ||||||||||    
T  20458899 ggaatctgaaattacagggacgtaatttatgcaaattctgttgacttgatcaaaggagggaccaaaagtggaagaatctgaaattacagtgacaaaatct 20458998  T
Q  383 aaattttttattttacaaggactaaa 408  Q
    |||| |||| ||||||| | ||||||    
T  20458999 aaatctttttttttacaggtactaaa 20459024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 28218321 - 28218196
Alignment:
Q  311 atgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaaa 409  Q
    ||||||||||||||||| ||||  ||| |||||| |||| ||||  |||||||||||||| ||||||||||||||| ||||| ||||||| |||||||||    
T  28218321 atgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttttttttacagggactaaaa 28218222  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  28218221 ccggaattcgctaatattacagggac 28218196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 1250414 - 1250566
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||| || | |||  |||||| |||| ||||  ||| |||||||| | |||||||||||    
T  1250414 ggaatttgaaattacagggacgtaatttatgcagattcttctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattaaagggacaaaatct 1250513  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||| ||||||  ||||||||  || ||| | |||||||||| ||||    
T  1250514 aaatcttttagtttacagagactaaaactggaattcgctaatattacaaggac 1250566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 23704831 - 23704680
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||| ||||||||||||||||||  |||| || | |||  |||||| |||| ||||  |||||||||||||| ||||||||| |    
T  23704831 ggaatctgaaattacagggaagtaatttatgcagattctattgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatgt 23704732  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| |||||||  || ||||| ||| ||| | |||||||||||||||    
T  23704731 aaatctttt-ttttacagtgagtaaaaccggaattcgctaatattacagggac 23704680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 10409544 - 10409431
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||  || | ||| ||||||| |||| | ||  ||||||||||||||||||||||||||    
T  10409544 ggaatctgaaattacaaggacgtaattgatgcagattttgctgaagtgatgaaagaagggactaaaagtagaagaatctgaaattacaaggacaaaatct 10409445  T
Q  383 aaat-tttttattt 395  Q
    |||| |||||||||    
T  10409444 aaatctttttattt 10409431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 12006683 - 12006559
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||  |||| ||||  |||||||||||||| ||||||||||| |||||||| ||||||| |||||||||    
T  12006683 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagggacaaaatct-aatttttttttttacagggactaaaa 12006585  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||| ||| | |||||||||||||||    
T  12006584 tcggaattcgctaatattacagggac 12006559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 20419679 - 20419554
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||||||||  ||| |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  20419679 tatgcagattctgcttacgtggtggaatgagggaccaaaaatggaagaatatgaaattacagggacaaaatctaaatctttttttttacagggactaaaa 20419580  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||| ||||||    
T  20419579 ccggaattcgctaatattatagggac 20419554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 23383708 - 23383860
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||| |||||||| ||||||| ||||||||||||||| |||| || | |||  |||||| |||  ||||  ||| |||||||||| |||||||||||    
T  23383708 ggaatctaaaattacaaggacgtagtttatgcagattctgttgacttgatgaaaggagggaccaaaggtggaagaatatgaaattacagggacaaaatct 23383807  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| |||| || ||||||||||| | |||   |||||||||||||||    
T  23383808 aaatcttttttttttcagggactaaaatcagaattcactaatattacagggac 23383860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 48648437 - 48648587
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || | |||  |||||| | || ||||  ||||| ||||||||  ||||||||||    
T  48648437 ggaatctgaaattacagggacgtaatttatgcagattctgttgacgtgatgaaaggagggaccagaagtggaagaatctaaaattacatagacaaaatct 48648536  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||  ||||| |  |||||||||||  ||| | ||||||||| |||||    
T  48648537 aaatcttt--ttttatagagactaaaatcgaaattcgctaatattactgggac 48648587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 20963703 - 20963853
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||||||||||||| ||| || |||| || | |||  ||| || |||| || |  |||||||||||||| |||| ||||||    
T  20963703 ggaatatgaaattacagggacgtaatttatgcaaattatgttgacgtgatgaaaggagg-accaaaagtgaaagaatctgaaattacagggactaaatct 20963801  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||||| | ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  20963802 aaattttat-ttttacagggactaaaaccggaattcgctaatattacagggac 20963853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 283 - 431
Target Start/End: Original strand, 48672487 - 48672635
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||| |||||||||| ||||||||| |||| || || | |||  |||||| |||| ||||  |||||||||||||| ||| |||||||    
T  48672487 ggaatttgaaattacaaggacgtaattgatgcagattttgctaacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggataaaatct 48672586  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacag 431  Q
    |||| ||||  |||||| ||||||||| ||  ||| | |||||||||||    
T  48672587 aaatctttttatttacagggactaaaaccgaaattcgctaatattacag 48672635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 7658177 - 7658325
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||| || | |||  || ||| |||| ||||  ||||| |||||||| ||||||||||     
T  7658177 ggaatatgaaattacagggacataatttatgcagattttgctgacgtgatgaaaggagagaccaaaagtggaagaatcttaaattacagggacaaaatc- 7658275  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
       |||||| |||||||  |||||||| ||  ||| |||||||||||||||||    
T  7658276 ---tttttttttttacagagactaaaaccgaaattcgttaatattacagggac 7658325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 278 - 384
Target Start/End: Original strand, 31851442 - 31851548
Alignment:
Q  278 tgagtggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaa 377  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||  || | |||  || ||| |||| ||||  ||| |||||||||| ||||||    
T  31851442 tgagaggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaa 31851541  T
Q  378 aatctaa 384  Q
    |||||||    
T  31851542 aatctaa 31851548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 38879867 - 38879741
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| ||||| ||||||| | ||||||    
T  38879867 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacaggaactaaa 38879768  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    || || ||| | |||||||||||||||    
T  38879767 attggaattcgctaatattacagggac 38879741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 431
Target Start/End: Original strand, 23704896 - 23705016
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  23704896 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttt-ttttacagggactaaaa 23704994  T
Q  410 tcgggatttgttaatattacag 431  Q
     ||| ||| | |||||||||||    
T  23704995 ccggaattcgctaatattacag 23705016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 48648404 - 48648280
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||| || || ||||  ||| |||||| ||||||| | ||||||||||||||| ||||||||||||||| |||| | ||||| |||||||||    
T  48648404 tatgcagattctacttacgtggtggaatgagggaccaaaaatgaaaaaatctgaaattacagggacaaaatctaaatctttt-tcttacatggactaaaa 48648306  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||  ||| | | |||||||||||||    
T  48648305 tcgaaattcgctgatattacagggac 48648280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 24195031 - 24195130
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || || |  ||| |||||| |||| ||||  ||| |||||||||||||||||||||||||| |||| ||||||| |||||||||    
T  24195031 tatgcagattctgcttacgtgatggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacagggactaaaa 24195130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 305 - 431
Target Start/End: Complemental strand, 16995347 - 16995222
Alignment:
Q  305 taatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggac 404  Q
    ||||| ||||||||||||||||| ||||  |||  ||||| |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||||| | ||    
T  16995347 taattgatgcagattctgctgacgtggtggaatgtgggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatatttt-ttttacaggaac 16995249  T
Q  405 taaaatcgggatttgttaatattacag 431  Q
    ||||| ||  ||| | |||||||||||    
T  16995248 taaaaccgaaattcgctaatattacag 16995222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 20419563 - 20419663
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacg 272  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||| | |||||||||||||||||| |||||| ||| |||    
T  20419563 atattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccatttttggtccctcattccaccacg 20419662  T
Q  273 t 273  Q
    |    
T  20419663 t 20419663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 25772506 - 25772382
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||  |||| ||||  ||| |||||||||||||||||||||||||| |||| |||||||   |||||||    
T  25772506 tatgcagattctgcttacgtggtggaatgagggaacaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttt-ttttacagaaactaaaa 25772408  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||  ||| | |||||||||||||||    
T  25772407 tcgaaattcgctaatattacagggac 25772382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 275
Target Start/End: Original strand, 28218205 - 28218308
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn----tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactac 271  Q
    ||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||||||||| |||||||| |||||| ||| ||    
T  28218205 atattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccctcattccaccac 28218304  T
Q  272 gtca 275  Q
    ||||    
T  28218305 gtca 28218308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 430
Target Start/End: Original strand, 10409609 - 10409728
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||  |||| ||||  ||||| ||||||||  |||||||||||||| |||| ||||||| |||||||||    
T  10409609 tatgcagattctgctaacgtggtggaatgagggatcaaaagtggaagaatctaaaattacagagacaaaatctaaatctttt-ttttacagggactaaaa 10409707  T
Q  410 tcgggatttgttaatattaca 430  Q
    |||| ||| | ||||||||||    
T  10409708 tcggaattcgctaatattaca 10409728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 176 - 276
Target Start/End: Complemental strand, 28218514 - 28218411
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacg 272  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||  |||    
T  28218514 atattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttcatcacg 28218415  T
Q  273 tcaa 276  Q
    ||||    
T  28218414 tcaa 28218411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 434
Target Start/End: Complemental strand, 41600101 - 41599977
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||  |||  ||||  |||||||||||||| ||||||||||||||| |||| ||||| | |||||||||    
T  41600101 tatgcagattctgctaacgtggtggaatgagggatcaaatgtggaagaatctgaaattacagggacaaaatctaaatatttttttttatatggactaaaa 41600002  T
Q  410 tcgggatttgttaatattacaggga 434  Q
     ||  ||| | ||||||||||||||    
T  41600001 ccgaaattcgctaatattacaggga 41599977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 44816978 - 44816851
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaa--ttttttattttacaaggactaa 407  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  |||||||||||||| |||||||||| |||  |||||| |||||||  ||||||    
T  44816978 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatctgaaattacagggacaaaatcaaaatctttttttttttacagagactaa 44816879  T
Q  408 aatcgggatttgttaatattacagggac 435  Q
    || ||  ||| | |||||||||||||||    
T  44816878 aaccgaaattcgctaatattacagggac 44816851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 23705011 - 23704912
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||||||||||||||        |  |||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  23705011 atattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgt 23704912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 41600309 - 41600215
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  41600309 atattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 41600215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 217 - 267
Target Start/End: Complemental strand, 7658276 - 7658226
Alignment:
Q  217 agattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||||||||||||||| ||||||||||| |||||||||||| |||||    
T  7658276 agattttgtccctgtaatttaagattcttccacttttggtctctcctttca 7658226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 409
Target Start/End: Complemental strand, 7842577 - 7842484
Alignment:
Q  315 agattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| ||| |||||||  ||| || |||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||||| |||||||||    
T  7842577 agattctgctaacagggttaaacgaggaactaaaagtggaggaatctgaaattacagggacagaatctaaacttttt-ttttacagggactaaaa 7842484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 431
Target Start/End: Complemental strand, 23383643 - 23383521
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    ||||||||||||||| || ||||  ||| |||||| |||||||||  ||| |||||||| | ||||||||||||||| ||||| ||||| | ||||||||    
T  23383643 tatgcagattctgcttacgtggtggaatgagggacaaaaaatggaagaatatgaaattatagggacaaaatctaaatcttttttttttatagggactaaa 23383544  T
Q  409 atcgggatttgttaatattacag 431  Q
    | ||| |||   |||||||||||    
T  23383543 accggaattcactaatattacag 23383521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 24194959 - 24194910
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggacta 406  Q
    |||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  24194959 aatctgaaattacagggacaaaatctaaatctttttttttacaaggacta 24194910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 219 - 275
Target Start/End: Original strand, 1250279 - 1250335
Alignment:
Q  219 attttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||| | |||||||||||||||||| ||||||||||||||| ||| ||||||    
T  1250279 attttgtccttttaattttagattcttccacttttggtctctcattccaccacgtca 1250335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 20963565 - 20963613
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||| ||||||||||||||||||||||||| |||||||| ||||||    
T  20963565 tagatttagtccctgtaattttagattcttccacttttggtccctcatt 20963613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 268
Target Start/End: Complemental strand, 38880032 - 38879980
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcac 268  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| ||||||    
T  38880032 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttcac 38879980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 273
Target Start/End: Complemental strand, 10409724 - 10409625
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||||| |||||||||||||||        |  |||||||||| ||||||||||||||||||||| ||||| || |||||| ||| ||||    
T  10409724 atattagcgaattccgattttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttccacttttgatccctcattccaccacgt 10409625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 12006568 - 12006667
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn--tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||||| |||||||||||||||          ||||||||||||||||||||| ||||||||||| ||||| || |||||| ||| ||||    
T  12006568 atattagcgaattccgattttagtccctgtaaaaaaaaaaattagattttgtccctgtaatttcagattcttccacttttgatccctcattccaccacgt 12006667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 12006848 - 12006797
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  12006848 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 12006797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 16995269 - 16995328
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| ||||||||||| |||||||| | |||| ||| ||||||    
T  16995269 tagattttgtccctgtaatttcagattcttccacttttggtcccacattccaccacgtca 16995328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 20458719 - 20458818
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||| |||||||||||||||||||||||||        |  |||||||||| ||||||||| ||||||||||| |||||||| |||||| ||| ||||    
T  20458719 atattaacgaattccggttttagtccctgtaaataaaaaatttagattttgtcgctgtaatttcagattcttccacttttggtccctcattccaccacgt 20458818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 412
Target Start/End: Complemental strand, 31851382 - 31851282
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||| |||  || ||  |||| |||| |||| ||||||||||| |||| |||||||||||||  ||||||| | |||||||    
T  31851382 tatgcagattctgctgacgtggtgaaaagagagatcaaaagtggaaaaatatgaaattacaatgacagaatctaaattttt--ttttacaggaactaaaa 31851285  T
Q  410 tcg 412  Q
    |||    
T  31851284 tcg 31851282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 31851547 - 31851496
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  31851547 tagattttgtccctgtaatttcatattcttccacttttggtctctcctttca 31851496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 218 - 273
Target Start/End: Original strand, 44816907 - 44816962
Alignment:
Q  218 gattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||| ||| ||||    
T  44816907 gattttgtccctgtaatttcagattcttccacttttggtccctcattccaccacgt 44816962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 38879794 - 38879851
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  38879794 tagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgt 38879851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 48648331 - 48648388
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| ||||| || ||||||||||| |||||| ||| ||||    
T  48648331 tagattttgtccctgtaatttcagattttttcatttttggtccctcattccaccacgt 48648388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 14800938 - 14800990
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| ||| |||||||||||||| ||||| ||||||| |||||||||    
T  14800938 aatctgaaatgacagggacaaaatctaaacttttttttttacagggactaaaa 14800990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 409
Target Start/End: Original strand, 15247930 - 15247982
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| ||| |||||||||||||| ||||| ||||||| |||||||||    
T  15247930 aatctgaaatgacagggacaaaatctaaacttttttttttacagggactaaaa 15247982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 267
Target Start/End: Original strand, 23704734 - 23704782
Alignment:
Q  219 attttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  23704734 attttgtccctgtaatttcagattcttccacttttggtccctcctttca 23704782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 33162770 - 33162870
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||||||||||||||||| |||| |||| |  ||| |||| ||||  ||| ||||||||||| |||| |||| |||| ||||| ||||| ||||||||||    
T  33162770 tatgcagattctgctgacgtggtgaaatgaaagactaaaagtggaagaatttgaaattacaatgacataatccaaatcttttttttttataaggactaaa 33162869  T
Q  409 a 409  Q
    |    
T  33162870 a 33162870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 48672422 - 48672295
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaa--ttttttattttacaaggactaa 407  Q
    |||||||||||||||||| ||||  ||| |||||  |||| ||||  ||||||||||||||  ||| |||||||||  |||||| |||||||  ||||||    
T  48672422 tatgcagattctgctgacgtggtggaatgagggatcaaaagtggaagaatctgaaattacagagacgaaatctaaatctttttttttttacagagactaa 48672323  T
Q  408 aatcgggatttgttaatattacagggac 435  Q
    || ||  |||   |||||||||||||||    
T  48672322 aaccgaaattcactaatattacagggac 48672295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 409
Target Start/End: Complemental strand, 1250349 - 1250250
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||| |||||| ||||  ||| || ||| |||| ||||  ||||| |||||| ||||||||||| |||||  ||| ||||||||||| |||||    
T  1250349 tatgcagattcagctgacgtggtggaatgagagaccaaaagtggaagaatctaaaattaaaaggacaaaatttaaataattttttttacaaggattaaaa 1250250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 6465882 - 6465913
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  6465882 atattagcgaattccggttttagtccctgtaa 6465913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 20419844 - 20419793
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||| | |||||||| ||| |||||    
T  20419844 tagattttgtccctgtaatttcagattcttctacttttggtccctcctttca 20419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Complemental strand, 20963844 - 20963813
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  20963844 atattagcgaattccggttttagtccctgtaa 20963813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 25772639 - 25772588
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||| | |||||||| ||| |||||    
T  25772639 tagattttgtccctgtaatttcagattcttctacttttggtccctcctttca 25772588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 48672587 - 48672536
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||| |||||||||||| ||||||||||| |||||||| ||| |||||    
T  48672587 tagattttatccctgtaatttcagattcttccacttttggtccctcctttca 48672536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 20458999 - 20458958
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||    
T  20458999 tagattttgtcactgtaatttcagattcttccacttttggtc 20458958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 356 - 437
Target Start/End: Complemental strand, 23275021 - 23274941
Alignment:
Q  356 aaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    ||||||||||||||||| ||| |||||||| ||||||||||| |  |||||||||||  ||| | | |||||||| ||||||    
T  23275021 aaatctgaaattacaag-acataatctaaactttttattttatagagactaaaatcgaaattcgctcatattacaaggacca 23274941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 23383570 - 23383627
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||| |||||| | |||||||||||||| ||| |||||| ||| ||||    
T  23383570 tagattttgtccctataatttcatattcttccattttttgtccctcattccaccacgt 23383627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 41600028 - 41600085
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| |||||||||||  |||| || |||||| ||| ||||    
T  41600028 tagattttgtccctgtaatttcagattcttccacatttgatccctcattccaccacgt 41600085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 385
Target Start/End: Original strand, 23276235 - 23276307
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaa 385  Q
    |||||||||||||||| | |||| | || |||  ||| ||||  |||||||||||||||||||| ||||||||    
T  23276235 gcagattctgctgacaagtttaagtgagagactcaaagtggaataatctgaaattacaaggacataatctaaa 23276307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 24195104 - 24195056
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    |||||||||||| |||||||| | ||||||||| |||||||| ||||||    
T  24195104 tagattttgtccttgtaatttcatattcttccacttttggtccctcatt 24195056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 33131729 - 33131649
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||||||||| | | ||||| ||||||||||||||  |||||| ||||||||| ||| | | | | |||||||||||||||    
T  33131729 aatctgaaatgatagggacagaatctaaatttttttatttacagggactaaaaccggaaatcgctcatattacagggacca 33131649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 48648537 - 48648477
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtcaa 276  Q
    |||||||||||  |||||||||||||||||||| || ||||| ||| |||||  |||||||    
T  48648537 tagattttgtctatgtaattttagattcttccacttctggtccctcctttcatcacgtcaa 48648477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 4e-33; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 9396869 - 9396717
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| |||| |||| |||||||| | |||||||||||    
T  9396869 ggaatctgaaattacagggacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaaaaatttgaaattatagggacaaaatct 9396770  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||| |||  |||||||||||  ||| | |||||||||||||||    
T  9396769 aaatcttttttttaacagagactaaaatcgaaattcgctaatattacagggac 9396717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 399
Target Start/End: Original strand, 34064190 - 34064306
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || | ||| ||||||| |||| ||||  ||||||||||||||  ||||||||||    
T  34064190 ggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaagaagggaccaaaagtggaagaatctgaaattacagagacaaaatct 34064289  T
Q  383 aaattttttattttaca 399  Q
    |||| ||||||||||||    
T  34064290 aaatcttttattttaca 34064306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 285 - 435
Target Start/End: Original strand, 41947066 - 41947214
Alignment:
Q  285 aatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaa 384  Q
    |||||||||||||||||||||||||||||||||||||| |||| |  | |||  |||||| |||| |||| |||| ||||||||||||||||||||||||    
T  41947066 aatctgaaattacagggacgtaatttatgcagattctgttgactttatgaaagcagggaccaaaagtggaaaaatatgaaattacaaggacaaaatctaa 41947165  T
Q  385 attttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
      ||||| ||||| ||||||||||| ||  ||| | |||||||||||||||    
T  41947166 --ttttttttttaaaaggactaaaaccgaaattcgctaatattacagggac 41947214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 312 - 437
Target Start/End: Complemental strand, 43312350 - 43312225
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    |||||||| |||||||| | |||||  |||||| |||| ||||| |||||||||||||| ||||| ||| |||||||||| ||||||| |||||||||||    
T  43312350 tgcagattttgctgacaggattaaacgagggactaaaagtggaggaatctgaaattacagggacagaatttaaatttttttttttacagggactaaaatc 43312251  T
Q  412 gggatttgttaatattacagggacca 437  Q
    || ||||| |||||||||||||||||    
T  43312250 ggaatttgctaatattacagggacca 43312225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 46046632 - 46046784
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||| ||||||||| ||||||| || | |||  |||||  |||| ||||  |||||||||||||| |||||||||||    
T  46046632 ggaatctgaaattacaaggacgtaattgatgcagattttgctgacgtgatgaaaggagggatcaaaagtggaagaatctgaaattacagggacaaaatct 46046731  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| ||||||||| ||| ||| | |||||||||||||||    
T  46046732 aaatctttttatttacagggactaaaaccggaattcgctaatattacagggac 46046784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 285 - 435
Target Start/End: Original strand, 31090271 - 31090421
Alignment:
Q  285 aatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaa 384  Q
    |||||||||||||| |||||||||||||| |||||||  |||| || | |||  |||||| |||| | ||  |||||||||||||| |||||||||||||    
T  31090271 aatctgaaattacaaggacgtaatttatgtagattctattgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatctaa 31090370  T
Q  385 attttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
     |||||| ||||||| ||||||||||||  ||| | |||||||||||||||    
T  31090371 ttttttttttttacagggactaaaatcgaaattcgctaatattacagggac 31090421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 3018182 - 3018029
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||| || ||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  3018182 ggaatgtgaaattacaaggccgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 3018083  T
Q  383 aaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||| ||||||  ||||||||| ||| ||| | |||||||||||||||    
T  3018082 aaatcttttttttttaccgggactaaaaccggaattcgctaatattacagggac 3018029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 9516753 - 9516628
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  9516753 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttacaaggactaaaa 9516654  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  9516653 ccggaattcgctaatattacagggac 9516628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 9619149 - 9618998
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  9619149 ggaatatgaaattacagggacgta-tttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 9619051  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||  ||||||| ||||||||| ||| ||| | |||||||||| ||||    
T  9619050 aaatctttgtttttacagggactaaaaccggaattcgctaatattacatggac 9618998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 15640885 - 15640734
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  || | |||  |||||| |||| || |  ||| |||||||||| |||||||||||    
T  15640885 ggaatctgaaattacagggacgtaatttatgcatattctgctgatgtgatgaaaggagggaccaaaagtgaaagaatatgaaattacagggacaaaatct 15640786  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| | ||||||| ||| ||| | |||||||||||||||    
T  15640785 aaatctttt-ttttacaggaactaaaaccggaattcgctaatattacagggac 15640734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 391
Target Start/End: Complemental strand, 26252438 - 26252330
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||||||||||||||||| |||| || | |||  |||||| |||| ||||  |||||||||||||| |||||||||||    
T  26252438 ggaatctgaaattacagggacgtaatttatgcagattctgttgacttgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacaaaatct 26252339  T
Q  383 aaatttttt 391  Q
    || ||||||    
T  26252338 aattttttt 26252330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 283 - 410
Target Start/End: Complemental strand, 18713130 - 18713003
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  18713130 ggaatctgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagggaccaaaattggaacaatatgaaattacagggacaaaatct 18713031  T
Q  383 aaattttttattttacaaggactaaaat 410  Q
    ||||  ||| ||||||| |||| |||||    
T  18713030 aaatcgttttttttacagggacgaaaat 18713003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 289 - 435
Target Start/End: Original strand, 13132155 - 13132299
Alignment:
Q  289 tgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattt 388  Q
    |||||||||| |||||||||||||||||||||||||||  || | ||| ||||||| |||| ||||  ||| |||||||||| ||||| ||||||||| |    
T  13132155 tgaaattacaaggacgtaatttatgcagattctgctgatttgatgaaagaagggaccaaaagtggaagaatatgaaattacagggacagaatctaaatct 13132254  T
Q  389 tttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||| |||||| |||||||||||||  ||| | |||||||||||||||    
T  13132255 ttt-ttttac-aggactaaaatcgaaattcgctaatattacagggac 13132299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 37012850 - 37012725
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||||||||||| |||    
T  37012850 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttacaaggactgaaa 37012751  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |  | ||| | |||||||||| ||||    
T  37012750 ttagaattcgctaatattacaaggac 37012725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 9516818 - 9516970
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||||||| ||||| || |||| || | |||  |||||| |||| | ||  |||||||||||||| |||||||||||    
T  9516818 ggaatctgaaattacaaggacgtaatttatgtagattttgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatct 9516917  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| |||||||  |||||||| ||  ||| | |||||||||||||||    
T  9516918 aaatctttttttttacagagactaaaaccgaaattcgctaatattacagggac 9516970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 38574176 - 38574328
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||| |||| ||||||||| || |||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  38574176 ggaatctgaaattacagggacgcaattgatgcagattttgttgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 38574275  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||| ||||||||| | | ||| | |||||||||||||||    
T  38574276 aaatctttttatttacagggactaaaaccagaattcgctaatattacagggac 38574328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 284 - 435
Target Start/End: Original strand, 37012916 - 37013066
Alignment:
Q  284 gaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatcta 383  Q
    |||| ||||||||||||||||||||||||||||||| ||||||| || | |||  || ||| |||| ||||  ||| |||||||||| |||||||||||     
T  37012916 gaatatgaaattacagggacgtaatttatgcagattttgctgacgtgatgaaaggagtgaccaaaagtggaagaatatgaaattacagggacaaaatct- 37013014  T
Q  384 aattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||||| || |||| ||||||||| | | ||| | |||||||||||||||    
T  37013015 aatttttttttatacagggactaaaaccagaattcgctaatattacagggac 37013066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 9396934 - 9397058
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| || |  ||| | || | |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||||| |||||||||    
T  9396934 tatgcagattctgctgacgtgttggaatgatggtccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttt-ttttacagggactaaaa 9397032  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||||| |||||||||||||||    
T  9397033 ccggaatttgctaatattacagggac 9397058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 312 - 409
Target Start/End: Original strand, 36888917 - 36889012
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||||| |||||||  |||||| |||| ||||| |||||||||||||| ||||| |||||||||||||| |||||| ||||||||||    
T  36888917 tgcagattctgctgacaaggttaaacgagggactaaaagtggaggaatctgaaattacagggacataatctaaatttttt-ttttac-aggactaaaa 36889012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 48580074 - 48580226
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||| |||||||||||||||| |||||||| |  || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  48580074 ggaatttgaaattacaaggacgtaatttatgcatattctgctaaggtgatgaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatct 48580173  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||  ||| |||||  |||| ||||| ||| ||| | |||||||||||||||    
T  48580174 aaatcgttttttttatcaggattaaaaccggaattcgctaatattacagggac 48580226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 385
Target Start/End: Complemental strand, 4356051 - 4355949
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| ||||||||||||||||||||||||| || || | |||| |||||| |||| || |  ||| ||||||||||  ||||||||||    
T  4356051 ggaatctgaaattacaaggacgtaatttatgcagattctgctaacgtgatgaaatgagggaccaaaagtgaaagaatatgaaattacatagacaaaatct 4355952  T
Q  383 aaa 385  Q
    |||    
T  4355951 aaa 4355949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 3018247 - 3018370
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| ||||||| ||||  |||||||||| |||| |||   |||||||||||||| |||| |||||||||| |||| ||||||| |||||||||    
T  3018247 tatgcagattatgctgacgtggtggaataagggaccaaaagtggtagaatctgaaattacacggac-aaatctaaatctttt-ttttacagggactaaaa 3018344  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||  ||| |||||||||||||||||    
T  3018345 ccgaaattcgttaatattacagggac 3018370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 38574111 - 38573987
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| ||| |||||    
T  38574111 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttt-ttttacagggattaaaa 38574013  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    |||| |||   |||||||||| ||||    
T  38574012 tcggaattcactaatattacatggac 38573987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 48580009 - 48579884
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||| ||||||||||||| ||||  |||||||||| |||| || |  ||||||||||||||  |||||||||||||| |||| |||||||  ||||||||    
T  48580009 tatgtagattctgctgacgtggtggaataagggaccaaaattgaaagaatctgaaattacagagacaaaatctaaatctttttttttacatagactaaaa 48579910  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||   || |||||||||||||||||    
T  48579909 ccgaacttcgttaatattacagggac 48579884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 9619007 - 9619101
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa---cnnnnnnntagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||||||||   |       ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  9619007 atattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 9619101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 13132084 - 13131958
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||||||||||||||||| |||| |||| |||||  |||| ||||  |||||||||||||| | ||| ||||||||| ||||| ||||||| ||||||||    
T  13132084 tatgcagattctgctgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacatgaacataatctaaatcttttttttttacagggactaaa 13131985  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    |  |  ||| |||||||||||| ||||    
T  13131984 acagaaattcgttaatattacaaggac 13131958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 31090204 - 31090078
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||||| |||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| ||||| ||||||| ||||||||    
T  31090204 tatgcaaattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatcttttttttttacagggactaaa 31090105  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    ||||  |||   |||||||||||||||    
T  31090104 atcgaaattcactaatattacagggac 31090078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 7819184 - 7819071
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||| ||||||||| | || || || | |||  ||| || |||| ||||  |||||||||||||| |||||||||||    
T  7819184 ggaatctgaaattacatggacgtaattgatgcagattttactaacgtgatgaaaggaggaaccaaaagtggaagaatctgaaattacagggacaaaatct 7819085  T
Q  383 aaat-tttttattt 395  Q
    |||| |||||||||    
T  7819084 aaatctttttattt 7819071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 435
Target Start/End: Original strand, 9619218 - 9619339
Alignment:
Q  314 cagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgg 413  Q
    ||||||||||| || ||||  ||| | |||| |||| ||||  ||| |||||||||||||||||||||||||| |||| || |||| ||||||||| | |    
T  9619218 cagattctgcttacgtggtggaatgaaggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttctacagggactaaaaccag 9619317  T
Q  414 gatttgttaatattacagggac 435  Q
     ||| | |||||||||||||||    
T  9619318 aattcgctaatattacagggac 9619339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 31944120 - 31943967
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||| ||||| |||||| || || |||| || | |||  || ||| |||| ||||  ||| |||||||||| |||||||||||    
T  31944120 ggaatctgaaattacatggacataattgatgcaggttttgttgacgtgatgaaaggagagaccaaaagtggaagaatatgaaattacagggacaaaatct 31944021  T
Q  383 aaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||||  |||||| | ||||||| ||| ||| | |||||||||||||||    
T  31944020 aaatcttttttatttacaggaactaaaaccggaattcgctaatattacagggac 31943967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 34064125 - 34064000
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||| |||||| |||||  ||||  ||| |||||| |||| ||||  ||||||||||||||  |||||||||||||| |||| ||||||| |||||||||    
T  34064125 tatgtagattcggctgatgtggtggaatgagggaccaaaagtggaagaatctgaaattacagagacaaaatctaaatctttttttttacagggactaaaa 34064026  T
Q  410 tcgggatttgttaatattacagggac 435  Q
       | ||| |||||||||||||||||    
T  34064025 ctagaattcgttaatattacagggac 34064000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 294 - 435
Target Start/End: Complemental strand, 35376321 - 35376181
Alignment:
Q  294 ttacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttat 393  Q
    ||||| |||| |||||||||| |||||||||||| || | |||  || ||| |||| ||||  ||||| ||||||||  |||||||||||||| |||| |    
T  35376321 ttacatggacttaatttatgcggattctgctgacgtgatgaaaggagagaccaaaagtggaagaatctaaaattacagagacaaaatctaaatctttt-t 35376223  T
Q  394 tttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||||| ||||||||| | | ||| | |||||||||||||||    
T  35376222 tttacagggactaaaaccagaattcgctaatattacagggac 35376181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 176 - 267
Target Start/End: Original strand, 35376190 - 35376283
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||||||||| |||||||||||||||||        |  |||||||||| ||||||||||||||||||||| |||||||||||| |||||    
T  35376190 atattagcgaattctggttttagtccctgtaaaaaaaagatttagattttgtctctgtaattttagattcttccacttttggtctctcctttca 35376283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 435
Target Start/End: Original strand, 35376367 - 35376487
Alignment:
Q  314 cagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgg 413  Q
    |||||| ||||||| ||||  ||| |||||| |||| ||||  | |||||||||||| ||||||||| ||||| |||| ||||||| |||||||||  ||    
T  35376367 cagattttgctgacgtggtggaatgagggaccaaaagtggaagattctgaaattacagggacaaaatttaaatctttt-ttttacagggactaaaactgg 35376465  T
Q  414 gatttgttaatattacagggac 435  Q
     ||||| |||||||||||||||    
T  35376466 aatttgctaatattacagggac 35376487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 283 - 383
Target Start/End: Complemental strand, 3273792 - 3273692
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||| ||||||||||||||||||||||  |||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  3273792 ggaatatgaaattacaaggacgtaatttatgcagattctaatgacttgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 3273693  T
Q  383 a 383  Q
    |    
T  3273692 a 3273692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 312 - 396
Target Start/End: Complemental strand, 12520780 - 12520696
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttatttt 396  Q
    ||||||||||||||||| |||||||  ||| || |||| ||||| |||||||||||| | |||||||||||||| ||||| ||||    
T  12520780 tgcagattctgctgacagggttaaacgaggaactaaaagtggaggaatctgaaattatagggacaaaatctaaactttttttttt 12520696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 352 - 435
Target Start/End: Complemental strand, 48259924 - 48259841
Alignment:
Q  352 ggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||||||||||||| ||||||||||||||| ||||  |||||| ||| ||||| ||| ||| | |||||||||||||||    
T  48259924 ggaggaatctgaaattacatggacaaaatctaaatctttttatttacagggattaaaaccggaattcgctaatattacagggac 48259841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 18667524 - 18667650
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatc-taaattttttattttacaaggactaaa 408  Q
    |||||||||||| ||||| ||||  |||||||||| |||| ||||  |||||||||||||| || ||||||| |   |||||| ||||||||||| ||||    
T  18667524 tatgcagattctactgacgtggtggaataagggacaaaaactggaagaatctgaaattacagggtcaaaatcttttttttttttttttacaaggattaaa 18667623  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    |  || ||| | |||||||||||||||    
T  18667624 actggaattcgctaatattacagggac 18667650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 310 - 404
Target Start/End: Original strand, 18713195 - 18713288
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggac 404  Q
    |||| ||||||||||||| ||||  |||||||||| |||| ||||  ||||||||||||||  |||||||||||||| |||| ||||||| ||||    
T  18713195 tatgtagattctgctgacgtggtggaataagggaccaaaactggaagaatctgaaattacagagacaaaatctaaatctttt-ttttacagggac 18713288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 26252472 - 26252597
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || | ||  |||  ||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| | |||||||    
T  26252472 tatgcagattctgcttacgtagtggaatgggggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttttttttacaggaactaaaa 26252571  T
Q  410 tcgggatttgttaatattacagggac 435  Q
      || ||| | |||||||||||||||    
T  26252572 ctggaattcgctaatattacagggac 26252597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 31944185 - 31944310
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||| |||| ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||| | |||| |||||||  ||||||||    
T  31944185 tatgcagattctgttgacgtggtggaatgagggacaaaaagtggaagaatatgaaattacatggacaaaatctaattatttttttttacagagactaaaa 31944284  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||  ||| | |||||||||| ||||    
T  31944285 ccgaaattcgctaatattacaaggac 31944310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 434
Target Start/End: Original strand, 4356116 - 4356239
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  |||||||||| |||| ||||  ||| ||||||||||  ||||||||| ||||||||| | |||||  || |||||    
T  4356116 tatgcagattctgctgacgtggtggaataagggaccaaaagtggaagaatttgaaattacagagacaaaatc-aaattttttttattacagagattaaaa 4356214  T
Q  410 tcgggatttgttaatattacaggga 434  Q
     ||  ||| | ||||||||||||||    
T  4356215 ccgaaattcgctaatattacaggga 4356239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 409
Target Start/End: Complemental strand, 12904842 - 12904791
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |||||||||    
T  12904842 aatctgaaattataaggacaaaatctaaatttttt-ttttacagggactaaaa 12904791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 18667459 - 18667423
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagatt 319  Q
    |||||||||||||||||||||||||||||||||||||    
T  18667459 ggaatctgaaattacagggacgtaatttatgcagatt 18667423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 276
Target Start/End: Original strand, 31944020 - 31944080
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtcaa 276  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||| |||||  |||||||    
T  31944020 tagattttgtccctgtaatttcatattcttccacttttggtctctcctttcatcacgtcaa 31944080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 46046457 - 46046551
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||||||| |||||||||||||||        ||||||||||||||||||||| | ||||||||| ||||| || |||||| ||| ||||    
T  46046457 atattagcgaattccgattttagtccctgtaa---aaaaatagattttgtccctgtaatttcatattcttccacttttgatccctcattccaccacgt 46046551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 313 - 437
Target Start/End: Original strand, 50462634 - 50462758
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcg 412  Q
    |||||||||||||||||| || | | |||||  |||| ||||  |||||||||| | || |||| ||| |||| ||||| |||||| ||||| ||||| |    
T  50462634 gcagattctgctgacatgttttagtgagggatcaaaagtggaagaatctgaaatgataatgacagaatttaaacttttttttttacgaggaccaaaattg 50462733  T
Q  413 ggatttgttaatattacagggacca 437  Q
    | ||| | |||||||||||||||||    
T  50462734 gaattcgctaatattacagggacca 50462758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 3273855 - 3273953
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||| ||||| |||| |||| |||||  |||| ||||  |||||||||||||| ||| ||||||||||| |||| ||||| | |||||||||    
T  3273855 tatgcagattctactgacgtggtgaaatgagggatcaaaagtggaagaatctgaaattacagggataaaatctaaatctttt-ttttatagggactaaaa 3273953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 3273928 - 3273869
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||| |||||||||||| ||||||||||| ||||| || |||||||||| ||||||    
T  3273928 tagattttatccctgtaatttcagattcttccacttttgatccctcatttcaccacgtca 3273869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 7819322 - 7819263
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||| | ||||||||||| |||||||| |||||| ||| ||||||    
T  7819322 tagattttgtccctgtaatgtcagattcttccacttttggtccctcattccaccacgtca 7819263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 9397071 - 9396968
Alignment:
Q  154 aatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccattt 251  Q
    |||||| ||||| || || || |||||||| |||||||||||||||||||||||        |  |||||||||||||||||||| ||||||||||| ||    
T  9397071 aatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcagattcttccactt 9396972  T
Q  252 ttgg 255  Q
    ||||    
T  9396971 ttgg 9396968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 15641023 - 15640964
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||| |||||||||||||| ||||||||||| |||||||  |||||||||| ||||||    
T  15641023 tagattatgtccctgtaatttcagattcttccacttttggttcctcatttcaccacgtca 15640964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 26252338 - 26252389
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  26252338 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 26252389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 37012777 - 37012836
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| ||||||||||| |||||||| || ||| ||| ||||||    
T  37012777 tagattttgtccctgtaatttcagattcttccacttttggtcccttattccaccacgtca 37012836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 38574038 - 38574097
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||||    
T  38574038 tagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgtca 38574097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 46046775 - 46046681
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||||||||           ||||||||||||||||||||| ||||||||||| ||||| || ||| |||||    
T  46046775 atattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttccacttttgatccctcctttca 46046681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 396
Target Start/End: Original strand, 15640950 - 15641036
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttatttt 396  Q
    |||||| ||||||||||| |||| |||| ||| || |||| ||||  |||||||||||||| ||||| ||||||||| |||| ||||    
T  15640950 tatgcatattctgctgacgtggtgaaatgaggaaccaaaagtggaagaatctgaaattacagggacataatctaaatcttttttttt 15641036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 383
Target Start/End: Original strand, 7819249 - 7819322
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatcta 383  Q
    |||||||||||||||||| ||||  ||| |||||| |||| ||||  ||||||| |||||| ||||||||||||    
T  7819249 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctgacattacagggacaaaatcta 7819322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 12904816 - 12904873
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||| | |||||| ||||||||||| ||||||||||||||| ||| ||||    
T  12904816 tagattttgtccttataatttcagattcttccacttttggtctctcattccaccacgt 12904873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 26252545 - 26252488
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| | ||||||||| |||||||| | |||| ||||||||    
T  26252545 tagattttgtccctgtaatttcatattcttccacttttggtcccccattccactacgt 26252488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 31090131 - 31090188
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  31090131 tagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgt 31090188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 37013057 - 37012964
Alignment:
Q  176 atattagcgaattccggttttagtccctgta--acnnnnnnntagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||||||||||| ||||||||||||||||  |        ||||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  37013057 atattagcgaattctggttttagtccctgtataaaaaaaaattagattttgtccctgtaatttcatattcttccacttttggtcactcctttca 37012964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 388 - 437
Target Start/End: Complemental strand, 46934136 - 46934087
Alignment:
Q  388 ttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||| ||||||| ||||||||| ||| |||||||||||||||||||||||    
T  46934136 tttttttttacacggactaaaaccggaatttgttaatattacagggacca 46934087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 7819084 - 7819124
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggt 256  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  7819084 tagattttgtccctgtaatttcagattcttccacttttggt 7819124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 34064052 - 34064100
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||||||| ||||||||| ||||||||||| |||||||| ||||||    
T  34064052 tagattttgtctctgtaatttcagattcttccacttttggtccctcatt 34064100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 275
Target Start/End: Complemental strand, 35376433 - 35376377
Alignment:
Q  219 attttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||||||||||||| ||| ||||||| |||||||| |||||| ||| ||||||    
T  35376433 attttgtccctgtaatttcagaatcttccacttttggtccctcattccaccacgtca 35376377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 38574276 - 38574216
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtcaa 276  Q
    ||||||||||||||||||||| | ||||||||| |||||||| ||| |||||  |||||||    
T  38574276 tagattttgtccctgtaatttcatattcttccacttttggtccctcctttcatcacgtcaa 38574216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 3018082 - 3018133
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  3018082 tagattttgtccctgtaatttcatattcttccacttttggtccctcctttca 3018133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 3273692 - 3273743
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  3273692 tagattttgtccctgtaatttcatattcttccacttttggtccctcctttca 3273743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 9516918 - 9516867
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||| | |||||||| ||| |||||    
T  9516918 tagattttgtccctgtaatttcagattcttctacttttggtccctcctttca 9516867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 18713268 - 18713209
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||| ||||||||| ||||||||||| |||||||| || ||| ||| ||||||    
T  18713268 tagattttgtctctgtaatttcagattcttccagttttggtcccttattccaccacgtca 18713209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Complemental strand, 31090369 - 31090318
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||| | |||||||| ||| |||||    
T  31090369 tagattttgtccctgtaatttcagattcttctacttttggtccctcctttca 31090318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Complemental strand, 31218332 - 31218301
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  31218332 atattagcgaattccggttttagtccctgtaa 31218301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 354 - 435
Target Start/End: Complemental strand, 41947061 - 41946983
Alignment:
Q  354 agaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||||||||||||||| |||||||||||||   |||| |||| || ||||||||| ||| |||   |||||||||||||||    
T  41947061 agaaatctgaaattacagggacaaaatctaa---tttttttttgcagggactaaaaccggaattcactaatattacagggac 41946983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 9516680 - 9516737
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||| |||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  9516680 tagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgt 9516737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 34064290 - 34064249
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||| ||||||||| ||||||||||| ||||||||    
T  34064290 tagattttgtctctgtaatttcagattcttccacttttggtc 34064249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Original strand, 36887681 - 36887738
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  |||||||| || || |||||||||||||  |||||||||||||||||    
T  36887681 ggttaatacctcttttggtccctgtaatattagcgaattttggttttagtccctgtaa 36887738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 43313588 - 43313531
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaa 207  Q
    |||||||||  ||||||||  | || |||||||||||||| |||||||||||||||||    
T  43313588 ggttaataccacttttggtctctgtaatattagcgaattctggttttagtccctgtaa 43313531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 46935148 - 46935099
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcattt 265  Q
    |||||| ||||| ||| |||||||||||||||| ||||| ||||||||||    
T  46935148 tagattctgtccatgtcattttagattcttccaattttgatctctcattt 46935099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 20069608 - 20069560
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    |||||| ||||||| | |||| ||||||||||| |||||||||||||||    
T  20069608 tagattatgtccctatcatttgagattcttccacttttggtctctcatt 20069560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 276
Target Start/End: Complemental strand, 31944258 - 31944198
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtcaa 276  Q
    |||||||||||| |||||||| | ||||||||| |||| ||| |||||| ||| |||||||    
T  31944258 tagattttgtccatgtaatttcatattcttccactttttgtccctcattccaccacgtcaa 31944198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 313 - 437
Target Start/End: Complemental strand, 36887820 - 36887696
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcg 412  Q
    |||||||||||||||| | |||| | |||||| |||| ||||  ||||| |||| | | |||   |||||||| ||||| ||||||| ||||||||| |     
T  36887820 gcagattctgctgacaagtttaagtgagggaccaaaagtggaagaatctcaaatgatagggatggaatctaaacttttttttttacagggactaaaacca 36887721  T
Q  413 ggatttgttaatattacagggacca 437  Q
      ||| | |||||||||||||||||    
T  36887720 aaattcgctaatattacagggacca 36887696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Complemental strand, 48260059 - 48260011
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||||||||||||||||| | ||||||||| ||||| || ||||||    
T  48260059 tagattttgtccctgtaatttcaaattcttccacttttgatcgctcatt 48260011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 6e-32; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 275 - 437
Target Start/End: Original strand, 14681082 - 14681244
Alignment:
Q  275 aagtgagtggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaagga 374  Q
    ||||||| | |||||||||||||||||||||||| | |||||||||| ||||| | |||||||||||||| |||| ||||| ||||| ||||| ||||||    
T  14681082 aagtgagagtaatctgaaattacagggacgtaatatgtgcagattctactgacgtagttaaataagggaccaaaagtggaggaatctaaaattgcaagga 14681181  T
Q  375 caaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||| ||||||| ||||||||||||  |||||||  |   ||| | |||||||||||||||||    
T  14681182 caaagtctaaatattttattttacagagactaaagccaaaattcgctaatattacagggacca 14681244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 9481352 - 9481200
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||| |||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| |||||||||| ||||| |||||    
T  9481352 ggaatctgaaattacaggaacgtaatttatgcagattctgctgacgtgatgaaaggagggaccaaaattggaagaatatgaaattacagggacataatct 9481253  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||  ||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  9481252 aaatccttttttttacagggactaaaaccggaattcgctaatattacagggac 9481200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 30618131 - 30618024
Alignment:
Q  284 gaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatcta 383  Q
    |||||||||||||||||||||||||||||||||||||||||||| || | |||  |||||| |||| ||||  ||| |||||||||| ||||||||||||    
T  30618131 gaatctgaaattacagggacgtaatttatgcagattctgctgacgtgataaaaggagggaccaaaagtggaacaatatgaaattacagggacaaaatcta 30618032  T
Q  384 aatttttt 391  Q
    ||||||||    
T  30618031 aatttttt 30618024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 32017712 - 32017863
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| |||||||||||||| |||||||||||| |||| |||||| || | |||  |||||| |||| ||||  ||| |||||||||| |||||||||||    
T  32017712 ggaatttgaaattacagggatgtaatttatgcatattccgctgacgtgatgaaaggagggaccaaaagtggaagaatatgaaattacagggacaaaatct 32017811  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| |||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  32017812 aaatctttt-ttttacagggactaaaaccggaattcgctaatattacagggac 32017863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 24732108 - 24731953
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||||||| ||||| || |||| || | |||  |||||| |||| | ||  |||||||||||||| |||||||||||    
T  24732108 ggaatctgaaattacaaggacgtaatttatgtagattatgttgacttgatgaaaggagggaccaaaagtagaagaatctgaaattacagggacaaaatct 24732009  T
Q  383 aa---attttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||    |||||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  24732008 aatttttttttttttttacagggactaaaaccggaattcgctaatattacagggac 24731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 33637729 - 33637617
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |  | |||  |||||| |||| ||||  ||||| |||||||||| |||||||||    
T  33637729 ggaatctgaaattacagggacgtaatctatgcagattctgctgacgtaatgaaaggagggaccaaaagtggaagaatctaaaattacaagaacaaaatct 33637630  T
Q  383 aaattttttattt 395  Q
    |||| ||| ||||    
T  33637629 aaatctttaattt 33637617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 283 - 430
Target Start/End: Original strand, 3230071 - 3230217
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||| ||||||||||||||||| |||||||||||||||| |||| || | |||  | | || |||| || |  ||| |||||||| | |||||||||||    
T  3230071 ggaatatgaaattacagggacgtgatttatgcagattctgttgacgtgatgaaaagatg-accaaaagtgaaagaatatgaaattatatggacaaaatct 3230169  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    |||| |||||||||||| ||||||||||||| ||| | ||||||||||    
T  3230170 aaatcttttattttacagggactaaaatcggaattcgctaatattaca 3230217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 310 - 409
Target Start/End: Original strand, 9481417 - 9481516
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||| ||| ||||||| ||||  |||||||||| |||| ||||  |||||||||||||||||||||||||||||| |||| ||||||| |||| ||||    
T  9481417 tatgcaaattttgctgacgtggtggaataagggaccaaaagtggaagaatctgaaattacaaggacaaaatctaaatctttttttttacagggacgaaaa 9481516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 275 - 398
Target Start/End: Original strand, 17142838 - 17142960
Alignment:
Q  275 aagtgagtggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaagga 374  Q
    ||||||| ||||||||||||||||||||| |||||||| |||| |||  |||| |||||||| || |||| |||| ||||||||| ||||||||  ||||    
T  17142838 aagtgagaggaatctgaaattacagggacctaatttatacagaatctattgacgtggttaaa-aaaggaccaaaagtggagaaatatgaaattattagga 17142936  T
Q  375 caaaatctaaattttttattttac 398  Q
    |  |||| || |||||||||||||    
T  17142937 cctaatcaaatttttttattttac 17142960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 9854122 - 9854245
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||| ||||||| |||| |||| |||||| |||| ||||  ||| ||||||||||||||||||||||||||| ||  |||||||  ||||||||    
T  9854122 tatgcagattttgctgacgtggtgaaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaattattatttttaca--gactaaaa 9854219  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     | | ||| | |||||||||||||||    
T  9854220 ccagaattcgctaatattacagggac 9854245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 30618196 - 30618322
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaat-tttttattttacaaggactaaa 408  Q
    |||| ||||||||||||| ||||  |||||| ||| |||| ||||  ||||| |||||||| ||||||||||||||| ||||| ||||||||| ||||||    
T  30618196 tatgtagattctgctgacgtggtggaataagagacaaaaagtggaagaatctaaaattacagggacaaaatctaaatattttttttttacaagaactaaa 30618295  T
Q  409 atcgggatttgttaatattacagggac 435  Q
    ||||  ||| | |||||||| ||||||    
T  30618296 atcgaaattcgctaatattagagggac 30618322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 430
Target Start/End: Complemental strand, 14681025 - 14680908
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| |||| |||| | |||| |||| ||||  ||| ||||||||||| ||||||||||||||| ||| ||||||| |||||||||    
T  14681025 tatgcagattctgctgacgtggtgaaatgaaggaccaaaagtggaagaatatgaaattacaaagacaaaatctaaattattt-ttttacagggactaaaa 14680927  T
Q  410 tcgggatttgttaatattaca 430  Q
    |   |||| ||||||||||||    
T  14680926 t--tgattcgttaatattaca 14680908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 24732173 - 24732297
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| ||||||| ||||| |||    
T  24732173 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacatggacaaaatctaaatctttttttttacagggact-aaa 24732271  T
Q  410 tcgggatttgttaatattacagggac 435  Q
    | || ||| | |||||||||||||||    
T  24732272 ttggaattcgctaatattacagggac 24732297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 383
Target Start/End: Original strand, 2299518 - 2299617
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||| ||||||||||||||||||||||||||| |||| || | |||  |||||  |||| ||||  |||||||||||||| |||||||||||    
T  2299518 ggaatctgaaat-acagggacgtaatttatgcagattctgttgacttgatgaaaggagggataaaaagtggaagaatctgaaattacagggacaaaatct 2299616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 283 - 391
Target Start/End: Original strand, 10321939 - 10322047
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| |||||||||||||||||||||||||||| || | |||  | |||| |||| || |  |||||||||||||| ||||| ||| |    
T  10321939 ggaatctgaaattacaaggacgtaatttatgcagattctgctgacgtgatgaaaggaaggaccaaaagtgaaagaatctgaaattacagggacataattt 10322038  T
Q  383 aaatttttt 391  Q
    || ||||||    
T  10322039 aattttttt 10322047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 33714630 - 33714501
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaa--ttttttattttacaaggac--t 405  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||||||||||||||||||  |||||| ||||||| ||||  |    
T  33714630 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatctttttttttttacagggactat 33714531  T
Q  406 aaaatcgggatttgttaatattacagggac 435  Q
    |||| ||| ||| | |||||||||||||||    
T  33714530 aaaaccggaattcgctaatattacagggac 33714501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 434
Target Start/End: Complemental strand, 9154976 - 9154898
Alignment:
Q  357 aatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttg-ttaatattacaggga 434  Q
    |||||||||||||| ||||||||||||||| |||| ||||||| ||||||||||||| ||| | | |||||||||||||    
T  9154976 aatctgaaattacagggacaaaatctaaatctttttttttacagggactaaaatcggaattcgctaaatattacaggga 9154898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 430
Target Start/End: Complemental strand, 19284243 - 19284152
Alignment:
Q  339 agggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattaca 430  Q
    |||||| |||| ||||  |||||||||||||| ||||||||||||||| |||||||||||  |||||||||  || ||| | ||||||||||    
T  19284243 agggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatcttttattttacgtggactaaaactggaattcgctaatattaca 19284152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 30618269 - 30618210
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    ||||||||||||||||||||||||||||||||| |||| |||||| ||| ||| ||||||    
T  30618269 tagattttgtccctgtaattttagattcttccactttttgtctcttattccaccacgtca 30618210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 275 - 322
Target Start/End: Original strand, 33714687 - 33714734
Alignment:
Q  275 aagtgagtggaatctgaaattacagggacgtaatttatgcagattctg 322  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||    
T  33714687 aagtgagaggaatctgaaattacaaggacgtaatttatgcagattctg 33714734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 310 - 435
Target Start/End: Complemental strand, 18500457 - 18500333
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||| ||||||||||||||| |||| | ||||| |||||||||    
T  18500457 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacagggacaaaatctaaatctttt-tcttacagggactaaaa 18500359  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||  ||| | |||||||| ||||||    
T  18500358 ccgaaattcgctaatattatagggac 18500333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 26385348 - 26385405
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||| ||| ||||    
T  26385348 tagattttgtccctgtaattttatattcttccacttttggtccctcattccaccacgt 26385405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 32017854 - 32017761
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||||||||        |  |||||||||||||||||||| | ||||||||| |||||||| ||| |||||    
T  32017854 atattagcgaattccggttttagtccctgtaaaaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctcctttca 32017761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 275
Target Start/End: Original strand, 10321738 - 10321859
Alignment:
Q  154 aatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnntagattttgtccctgtaattttagattcttccattttt 253  Q
    |||||| ||||| || || || ||||||||||||||||||||||||||||| ||        |||||| | |||||||||||| | |||||| || ||||    
T  10321738 aatacttcttttcgtccctgtaatattagcgaattccggttttagtccctgaaaaaaaatattagattatatccctgtaatttcatattcttacactttt 10321837  T
Q  254 ggtctctcatttcactacgtca 275  Q
    | || |||||||||| ||||||    
T  10321838 gctccctcatttcaccacgtca 10321859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 310 - 412
Target Start/End: Complemental strand, 32017679 - 32017581
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  ||||| |||| |||| ||||  |||||||||||||||  ||||||||||||| |||  |||||||  ||||||||    
T  32017679 tatgcagattctgctgacgtggtggaataaaggaccaaaagtggaagaatctgaaattacaa--acaaaatctaaatgttt--ttttacagagactaaaa 32017584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 9854195 - 9854136
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||||||| |||||||| | ||||||||| |||||||| |||||||||| ||||||    
T  9854195 tagattttgtccttgtaatttcatattcttccacttttggtccctcatttcaccacgtca 9854136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 176 - 273
Target Start/End: Original strand, 18500342 - 18500441
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnnt--agattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||||||||| ||||||||||||||||||        |  |||||||||||||||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  18500342 atattagcgaatttcggttttagtccctgtaagaaaaagatttagattttgtccctgtaatttcatattcttccacttttggtccctcattccaccacgt 18500441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 19284199 - 19284250
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||||| |||||||| ||| |||||    
T  19284199 tagattttgtccctgtaatttcagattcttccacttttggtccctcctttca 19284250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 313 - 435
Target Start/End: Complemental strand, 21069655 - 21069532
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaa-ttttttattttacaaggactaaaatc 411  Q
    |||||||||||||||| | | || | | ||||  ||||||||  ||||||| |||||| ||||| |||||||| |||||| ||||||| ||||||||| |    
T  21069655 gcagattctgctgacaagttcaagtgaaggacctaaaatggaagaatctgatattacagggacagaatctaaactttttttttttacagggactaaaacc 21069556  T
Q  412 gggatttgttaatattacagggac 435  Q
    || ||| | | |||||||||||||    
T  21069555 ggaattcgctcatattacagggac 21069532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 33637629 - 33637688
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||||| | |||||||||||||||||||| |||||||| ||| ||||| |||||||    
T  33637629 tagattttgttcttgtaattttagattcttccacttttggtccctcctttcattacgtca 33637688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 431
Target Start/End: Complemental strand, 26385417 - 26385300
Alignment:
Q  314 cagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgg 413  Q
    ||||||||||| || ||||  ||| |||||| |||| ||||  ||| | |||||||| ||||||||||||||| |||| || |||| ||||||||| | |    
T  26385417 cagattctgcttacgtggtggaatgagggaccaaaagtggaagaatataaaattacagggacaaaatctaaatctttttttctacatggactaaaaccag 26385318  T
Q  414 gatttgttaatattacag 431  Q
     ||| | |||||||||||    
T  26385317 aattcgctaatattacag 26385300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 9154950 - 9154990
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggt 256  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  9154950 tagattttgtccctgtaatttcagattcttccagttttggt 9154990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 286 - 322
Target Start/End: Original strand, 18500558 - 18500594
Alignment:
Q  286 atctgaaattacagggacgtaatttatgcagattctg 322  Q
    |||||||||||||||||| ||||||||||||||||||    
T  18500558 atctgaaattacagggacataatttatgcagattctg 18500594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 2299367 - 2299398
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  2299367 atattagcgaattccggttttagtccctgtaa 2299398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 9481209 - 9481240
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  9481209 atattagcgaattccggttttagtccctgtaa 9481240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Complemental strand, 9481490 - 9481431
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||||||||| |||||||| ||||||||||| |||||||| || ||| ||| ||||||    
T  9481490 tagattttgtccttgtaatttcagattcttccacttttggtcccttattccaccacgtca 9481431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 17142747 - 17142798
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||| |||||||||||||| | ||||||||| |||||||||||| |||||    
T  17142747 tagattatgtccctgtaatttcaaattcttccacttttggtctctcgtttca 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 176 - 207
Target Start/End: Original strand, 24731962 - 24731993
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaa 207  Q
    ||||||||||||||||||||||||||||||||    
T  24731962 atattagcgaattccggttttagtccctgtaa 24731993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 24732008 - 24732059
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||| ||||||||| | |||||||| ||| |||||    
T  24732008 tagattttgtccctgtaatttcagattcttctacttttggtccctcctttca 24732059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 275
Target Start/End: Original strand, 30458971 - 30459030
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgtca 275  Q
    |||||| |||| ||||||||| ||||||||| | |||| |||||||||||||| ||||||    
T  30458971 tagattatgtcactgtaatttcagattcttcaacttttagtctctcatttcaccacgtca 30459030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 200
Target Start/End: Complemental strand, 9854262 - 9854212
Alignment:
Q  150 ggttaatactgcttttggtacccgtgatattagcgaattccggttttagtc 200  Q
    |||||||||||||||| || || || |||||||||||||| ||||||||||    
T  9854262 ggttaatactgctttttgtccctgtaatattagcgaattctggttttagtc 9854212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 435
Target Start/End: Original strand, 26385560 - 26385634
Alignment:
Q  361 tgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    ||||||| || | |||| |||||||| |||  ||||||| ||||||||||||| ||| | |||||||||||||||    
T  26385560 tgaaattgcaggaacaacatctaaatctttgtttttacagggactaaaatcggaattcgctaatattacagggac 26385634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 396
Target Start/End: Complemental strand, 30459044 - 30458958
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttatttt 396  Q
    |||||||||||||||||| |||| |||| || ||| |||| | ||  ||||||||||||||  |||| ||||||||| |||| ||||    
T  30459044 tatgcagattctgctgacgtggtgaaatgagagactaaaagttgaagaatctgaaattacagtgacataatctaaatcttttttttt 30458958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 2299617 - 2299580
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccattttt 253  Q
    ||||||||||||||||||||| ||||||||||| ||||    
T  2299617 tagattttgtccctgtaatttcagattcttccactttt 2299580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 24732246 - 24732189
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||| |||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  24732246 tagattttgtccatgtaatttcatattcttccacttttggtccctcattccaccacgt 24732189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Original strand, 33714557 - 33714614
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||| |||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  33714557 tagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgt 33714614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 223 - 264
Target Start/End: Original strand, 34884627 - 34884668
Alignment:
Q  223 tgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    |||||||||||||| |||||||||  ||||||||||||||||    
T  34884627 tgtccctgtaatttcagattcttctgtttttggtctctcatt 34884668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 412
Target Start/End: Complemental strand, 1580 - 1452
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| || | |||  |||||| |||| ||||  |||||||||||||| ||||| |||||    
T  1580 ggaatctgaaattatagggacgtaatttatgtagattctgctgacgtgatgaaaggagggaccaaaagtggaagaatctgaaattacagggacataatct 1481  T
Q  383 aaattttttattttacaaggactaaaatcg 412  Q
    |||| |||| ||||||| ||||||||||||    
T  1480 aaatctttt-ttttacagggactaaaatcg 1452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 1645 - 1766
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||  |||| |  | |||||| |||| ||||  |||||||||||||||||||| ||||||| ||||||    || | |||||||||    
T  1645 tatgcagattctgctgatgtggtgatgtgagggaccaaaagtggaagaatctgaaattacaaggacataatctaattttttt----tatagggactaaaa 1740  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| |||||||||||||||||    
T  1741 ccggaattcgttaatattacagggac 1766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 267
Target Start/End: Original strand, 1480 - 1531
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    |||||| |||||||||||||| ||||||||||| |||||||| ||| |||||    
T  1480 tagattatgtccctgtaatttcagattcttccacttttggtccctcctttca 1531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 4733 - 4580
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| ||||||||||||||||||||||| |||| || | |||  |||||| |||| | ||  ||||| |||||||| ||||||||| |    
T  4733 ggaatctgaaattacacggacgtaatttatgcagattctgttgacttgataaaaggagggaccaaaagtagaagaatctcaaattacagggacaaaattt 4634  T
Q  383 aaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||| ||||||| ||||||||||||| ||| | |||||||||| ||||    
T  4633 aaatcttttttttttacagggactaaaatcggaattcgctaatattacaaggac 4580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 4798 - 4922
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    ||||||||||||||| || ||||  ||| |||||| |||| ||||  ||| |||||||||||||||||||||||||| || | ||||||| ||| |||||    
T  4798 tatgcagattctgcttacgtggtggaatgagggaccaaaagtggaagaatatgaaattacaaggacaaaatctaaatcttat-ttttacagggattaaaa 4896  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||||| |||||||||||||||    
T  4897 ccggaatttgctaatattacagggac 4922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 4871 - 4814
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    |||||||||||| |||||||| | ||||||||| |||||||| |||||| ||| ||||    
T  4871 tagattttgtccttgtaatttcatattcttccacttttggtccctcattccaccacgt 4814  T

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Target: scaffold0185 (Bit Score: 56; Significance: 5e-23; HSPs: 3)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 283 - 410
Target Start/End: Original strand, 4077 - 4204
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| || | |||  |||||| ||||||| |  |||||||||||||||  ||| |||||    
T  4077 ggaatctgaaattacagagacataatttatgcagattctgctgacgtgatgaaaggagggaccaaaaatgaaagaatctgaaattacaacaacataatct 4176  T
Q  383 aaattttttattttacaaggactaaaat 410  Q
    |||| |||| ||||||| ||| ||||||    
T  4177 aaatatttttttttacagggattaaaat 4204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 312 - 435
Target Start/End: Complemental strand, 4010 - 3887
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatc 411  Q
    ||||||||||||||||||||| |||| || ||| || | ||||  ||| |||||||||| ||||| ||||||||| |||| ||||||| ||||||||| |    
T  4010 tgcagattctgctgacatggtgaaatgagcgaccaacagtggaagaatttgaaattacagggacataatctaaatctttttttttacagggactaaaacc 3911  T
Q  412 gggatttgttaatattacagggac 435  Q
    || ||| | |||||||||||||||    
T  3910 ggaattcgctaatattacagggac 3887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 268
Target Start/End: Original strand, 3896 - 3991
Alignment:
Q  176 atattagcgaattccggttttagtccctgt---aacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtctctcatttcac 268  Q
    ||||||||||||||||||||||||||||||   ||        |||||| |||||||||||||| | ||||||||| | |||||| ||||||||||    
T  3896 atattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattcttccactgttggtcgctcatttcac 3991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 54; Significance: 8e-22; HSPs: 3)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 7407 - 7560
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| ||| |||||||||||||||| || |||| || | |||  |  ||| |||| | ||  |||||||||||||| |||||||||||    
T  7407 ggaatctgaaattacaaggatgtaatttatgcagattttgttgacttgatgaaaggatagaccaaaagtagaagaatctgaaattacagggacaaaatct 7506  T
Q  383 aaat-tttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||| ||||||| ||||||||| ||| ||| | |||||||||||||||    
T  7507 aaatcttttttttttacagggactaaaaccggaattcgctaatattacagggac 7560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 7551 - 7456
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnn----tagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||||||||||            ||||||||||||||||||||| ||||||||| | ||||||||| || |||||    
T  7551 atattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggtctatcctttca 7456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 216 - 264
Target Start/End: Original strand, 7296 - 7344
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatt 264  Q
    ||||||||||||||||||||| | ||||||||| ||| |||| ||||||    
T  7296 tagattttgtccctgtaatttcatattcttccactttcggtccctcatt 7344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 283 - 427
Target Start/End: Original strand, 428 - 569
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    |||||||||||||||| | |||||||||||||||||||||||||  || |||||  ||  || |||| ||||  ||||||||||||| |  |||||||||    
T  428 ggaatctgaaattacaag-acgtaatttatgcagattctgctgatgtgattaaaggagataccaaaagtggaataatctgaaattacga--acaaaatct 524  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatatt 427  Q
    |||| |||||||||||| ||| ||||| ||| ||| |||||||||    
T  525 aaatcttttattttacagggagtaaaaccggaattcgttaatatt 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 310 - 435
Target Start/End: Original strand, 12217 - 12342
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| || | |||  | |||| |||| ||||  |||||||||||||| ||||||||||||||| |||| ||||| | |||||||||    
T  12217 tatgcagattctgctgacgtgatgaaaggatggaccaaaagtggaagaatctgaaattacagggacaaaatctaaatctttttttttatagggactaaaa 12316  T
Q  410 tcgggatttgttaatattacagggac 435  Q
     ||| ||| | |||||||||||||||    
T  12317 ccggaattcgctaatattacagggac 12342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 12290 - 12249
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtc 257  Q
    ||||||||||||||||||||| ||||||||||| ||||||||    
T  12290 tagattttgtccctgtaatttcagattcttccacttttggtc 12249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 310 - 432
Target Start/End: Original strand, 8557 - 8679
Alignment:
Q  310 tatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaa 409  Q
    |||||||||||||||||| ||||  ||| |||||| |||| ||||  ||||| |||||||| ||||||||||||||| |||| ||||| | |||||||||    
T  8557 tatgcagattctgctgacgtggtggaatgagggaccaaaagtggaagaatctaaaattacagggacaaaatctaaatctttttttttaaagggactaaaa 8656  T
Q  410 tcgggatttgttaatattacagg 432  Q
     ||| ||| | ||||||| ||||    
T  8657 ccggaattcgctaatattgcagg 8679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 154 - 275
Target Start/End: Complemental strand, 8695 - 8571
Alignment:
Q  154 aatactgcttttggtacccgtgatattagcgaattccggttttagtccctgtaacnnnnnnn---tagattttgtccctgtaattttagattcttccatt 250  Q
    |||||||||||| || || |  |||||||||||||||||||||||||||| |||           ||||||||||||||||||||||||||||||||| |    
T  8695 aatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattcttccact 8596  T
Q  251 tttggtctctcatttcactacgtca 275  Q
    ||||||| |||||| ||| ||||||    
T  8595 tttggtccctcattccaccacgtca 8571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 283 - 435
Target Start/End: Complemental strand, 8493 - 8343
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||||||||||||| ||||||||| || |||| || | |||  || ||| |||| || |  ||||||  |||||  |||||||||||    
T  8493 ggaatctgaaattacagggacgtaattgatgcagattttgttgacgtgatgaaaggagagaccaaaagtgaaagaatctg--attactgggacaaaatct 8396  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
    |||| ||||  |||||  ||||||||| ||  ||| | |||||||||||||||    
T  8395 aaatctttttatttacggggactaaaaccgaaattcgctaatattacagggac 8343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 346 - 437
Target Start/End: Original strand, 5949 - 6041
Alignment:
Q  346 aaaaatggagaaatctgaaattacaaggacaaaatctaaa-ttttttattttacaaggactaaaatcgggatttgttaatattacagggacca 437  Q
    |||| ||||| |||||||||||||| ||||| |||||||| |||||| ||||||| ||||||||||||| ||| | ||||||| |||||||||    
T  5949 aaaagtggaggaatctgaaattacagggacagaatctaaactttttttttttacagggactaaaatcggaattcgctaatattgcagggacca 6041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 313 - 435
Target Start/End: Complemental strand, 4807 - 4685
Alignment:
Q  313 gcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcg 412  Q
    |||||||||||||||| | | ||  ||||||| |||| ||||| |||||||||||||| ||||| |||||||| ||||| ||||| | |||||||||  |    
T  4807 gcagattctgctgacaagatcaagcaagggaccaaaagtggaggaatctgaaattacagggacagaatctaaacttttttttttatagggactaaaactg 4708  T
Q  413 ggatttgttaatattacagggac 435  Q
    | ||| | ||||||| |||||||    
T  4707 gaattcgctaatattgcagggac 4685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 312 - 396
Target Start/End: Original strand, 137 - 221
Alignment:
Q  312 tgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttatttt 396  Q
    ||||||||||||||||| |||||||  ||| || |||| ||||| |||||||||||| | |||||||||||||| ||||| ||||    
T  137 tgcagattctgctgacagggttaaacgaggaactaaaagtggaggaatctgaaattatagggacaaaatctaaactttttttttt 221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 5056 - 4999
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcatttcactacgt 273  Q
    ||||||| ||||||||||||||||||||||||| |||||||| |||||| ||| ||||    
T  5056 tagatttagtccctgtaattttagattcttccacttttggtccctcattccaccacgt 4999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 267
Target Start/End: Complemental strand, 15979 - 15889
Alignment:
Q  176 atattagcgaattccggttttagtccctgtaacnnnnnnntagattttgtccctgtaattttagattcttccatttttggtctctcatttca 267  Q
    ||||||||||||||||||||||||| ||||||         |||||||||||||||||||| | |||||| || |||||||||||| |||||    
T  15979 atattagcgaattccggttttagtctctgtaaaaaaaaaa-agattttgtccctgtaatttcatattctttcacttttggtctctcctttca 15889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 15841 - 15988
Alignment:
Q  283 ggaatctgaaattacagggacgtaatttatgcagattctgctgacatggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatct 382  Q
    ||||||||||||||||| |   ||||||||||||||||||||||| || | |||  || ||| |||| || |  ||| |||||||||| ||||||||||     
T  15841 ggaatctgaaattacagcgta-taatttatgcagattctgctgacgtgatgaaaggagagaccaaaagtgaaagaatatgaaattacagggacaaaatc- 15938  T
Q  383 aaattttttattttacaaggactaaaatcgggatttgttaatattacagggac 435  Q
       |||||| |||||||  |||||||| ||| ||| | |||||||||| ||||    
T  15939 ---tttttttttttacagagactaaaaccggaattcgctaatattacatggac 15988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Complemental strand, 27697 - 27648
Alignment:
Q  216 tagattttgtccctgtaattttagattcttccatttttggtctctcattt 265  Q
    |||||| |||||||||||| | ||||||||||| ||| ||||||||||||    
T  27697 tagattatgtccctgtaatatcagattcttccaatttcggtctctcattt 27648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 437
Target Start/End: Complemental strand, 26600 - 26495
Alignment:
Q  330 ggttaaataagggacgaaaaatggagaaatctgaaattacaaggacaaaatctaaattttttattttacaaggactaaaatcgggatttgttaatattac 429  Q
    |||||||| |||||   ||| |||| |||| |||||  |||||||| ||||||||| |||||  |||| ||||||||||||||| |||   |||||||||    
T  26600 ggttaaatgagggatctaaactggaaaaatttgaaaagacaaggacgaaatctaaacttttt--tttataaggactaaaatcggaattcagtaatattac 26503  T
Q  430 agggacca 437  Q
    | ||||||    
T  26502 aaggacca 26495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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