View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10038_low_7 (Length: 456)

Name: NF10038_low_7
Description: NF10038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10038_low_7
NF10038_low_7
[»] chr5 (40 HSPs)
chr5 (1-448)||(10298236-10298664)
chr5 (197-264)||(9747151-9747218)
chr5 (1-131)||(8419992-8420117)
chr5 (38-111)||(21351906-21351979)
chr5 (26-110)||(31084309-31084393)
chr5 (274-346)||(9747249-9747320)
chr5 (38-103)||(42893353-42893418)
chr5 (38-109)||(6247609-6247680)
chr5 (366-448)||(10290118-10290200)
chr5 (38-112)||(21191057-21191131)
chr5 (43-112)||(14674253-14674322)
chr5 (44-101)||(15405062-15405119)
chr5 (9-112)||(13287366-13287474)
chr5 (44-112)||(39698525-39698593)
chr5 (163-225)||(10290202-10290264)
chr5 (52-110)||(41995457-41995515)
chr5 (38-95)||(21576746-21576803)
chr5 (38-103)||(33178018-33178083)
chr5 (31-103)||(41633728-41633800)
chr5 (27-101)||(5894823-5894897)
chr5 (38-112)||(21522734-21522808)
chr5 (38-112)||(21533300-21533374)
chr5 (38-103)||(30135306-30135372)
chr5 (38-99)||(7677702-7677763)
chr5 (54-123)||(17925189-17925258)
chr5 (38-98)||(21542028-21542088)
chr5 (38-125)||(3966474-3966561)
chr5 (1-32)||(3966597-3966628)
chr5 (45-112)||(4105241-4105310)
chr5 (43-97)||(12159951-12160005)
chr5 (63-101)||(18316951-18316989)
chr5 (38-112)||(19579685-19579759)
chr5 (43-109)||(24906307-24906373)
chr5 (38-112)||(37328845-37328919)
chr5 (43-112)||(17177029-17177098)
chr5 (52-121)||(30098301-30098370)
chr5 (64-112)||(6770527-6770575)
chr5 (64-112)||(19552570-19552618)
chr5 (38-98)||(30183547-30183607)
chr5 (45-89)||(43001807-43001851)
[»] chr6 (34 HSPs)
chr6 (38-131)||(7801157-7801250)
chr6 (1-112)||(426483-426589)
chr6 (26-145)||(12696277-12696394)
chr6 (38-145)||(28715243-28715353)
chr6 (43-109)||(1681745-1681811)
chr6 (1-103)||(2117069-2117170)
chr6 (38-112)||(9107371-9107445)
chr6 (38-112)||(15489733-15489807)
chr6 (38-112)||(34595118-34595192)
chr6 (38-111)||(10770675-10770748)
chr6 (38-111)||(16766682-16766755)
chr6 (45-145)||(8776981-8777086)
chr6 (43-110)||(16833294-16833361)
chr6 (38-112)||(8365520-8365594)
chr6 (38-109)||(17302543-17302615)
chr6 (1-111)||(7938101-7938214)
chr6 (46-112)||(17841598-17841664)
chr6 (38-112)||(28152083-28152156)
chr6 (43-109)||(31959146-31959212)
chr6 (38-103)||(853860-853925)
chr6 (38-103)||(7977831-7977896)
chr6 (44-93)||(31384923-31384972)
chr6 (43-98)||(1191706-1191761)
chr6 (38-103)||(4877935-4878001)
chr6 (38-131)||(7027206-7027300)
chr6 (45-88)||(4118341-4118384)
chr6 (52-131)||(34225824-34225906)
chr6 (38-112)||(3398603-3398676)
chr6 (38-112)||(7930289-7930363)
chr6 (43-89)||(9522898-9522944)
chr6 (38-103)||(33001290-33001355)
chr6 (49-97)||(5970120-5970168)
chr6 (52-96)||(24115862-24115906)
chr6 (43-103)||(30866150-30866210)
[»] chr7 (37 HSPs)
chr7 (31-123)||(9408328-9408420)
chr7 (44-109)||(35861951-35862016)
chr7 (38-102)||(3991318-3991382)
chr7 (38-112)||(11061077-11061151)
chr7 (38-112)||(18215187-18215261)
chr7 (43-145)||(24105631-24105731)
chr7 (27-112)||(13770675-13770760)
chr7 (38-103)||(24339635-24339700)
chr7 (38-98)||(7438704-7438764)
chr7 (27-131)||(9778462-9778569)
chr7 (45-103)||(25481895-25481953)
chr7 (38-112)||(27945025-27945099)
chr7 (26-111)||(5409825-5409910)
chr7 (46-103)||(8234139-8234196)
chr7 (26-109)||(32094009-32094093)
chr7 (38-145)||(43027470-43027576)
chr7 (38-125)||(11665441-11665528)
chr7 (38-109)||(33994199-33994270)
chr7 (47-125)||(11831404-11831481)
chr7 (43-89)||(26033467-26033513)
chr7 (38-103)||(7197298-7197363)
chr7 (38-110)||(6630913-6630985)
chr7 (31-103)||(25822648-25822720)
chr7 (1-32)||(1433542-1433573)
chr7 (38-98)||(11272587-11272649)
chr7 (64-110)||(29763201-29763247)
chr7 (42-112)||(43249977-43250047)
chr7 (210-260)||(48522878-48522928)
chr7 (1-30)||(18035810-18035839)
chr7 (65-110)||(21826259-21826304)
chr7 (45-93)||(7058429-7058477)
chr7 (64-112)||(10042921-10042969)
chr7 (31-110)||(21560484-21560568)
chr7 (52-112)||(29787384-29787444)
chr7 (43-103)||(40287363-40287422)
chr7 (210-262)||(46392597-46392649)
chr7 (38-82)||(48438560-48438604)
[»] chr1 (52 HSPs)
chr1 (44-118)||(32434723-32434798)
chr1 (38-145)||(38078662-38078769)
chr1 (38-125)||(37598803-37598889)
chr1 (38-110)||(22881617-22881689)
chr1 (38-121)||(31672896-31672979)
chr1 (38-101)||(40258934-40258997)
chr1 (38-112)||(1704993-1705067)
chr1 (38-96)||(24577187-24577245)
chr1 (1-112)||(48450555-48450662)
chr1 (32-96)||(28273083-28273147)
chr1 (37-112)||(1815241-1815316)
chr1 (38-125)||(46348384-46348470)
chr1 (45-103)||(113292-113350)
chr1 (26-96)||(1486698-1486768)
chr1 (47-125)||(18556466-18556543)
chr1 (1-130)||(24334669-24334799)
chr1 (45-103)||(32461471-32461529)
chr1 (38-112)||(42359450-42359524)
chr1 (52-145)||(398780-398878)
chr1 (43-103)||(21378571-21378631)
chr1 (38-110)||(47989484-47989555)
chr1 (1-145)||(3490352-3490497)
chr1 (38-101)||(6332666-6332728)
chr1 (38-96)||(18190109-18190167)
chr1 (38-96)||(22515888-22515946)
chr1 (38-87)||(18337338-18337387)
chr1 (31-112)||(38503304-38503385)
chr1 (38-98)||(51410022-51410083)
chr1 (43-95)||(31015044-31015096)
chr1 (52-112)||(34298420-34298480)
chr1 (1-32)||(5898211-5898242)
chr1 (44-98)||(6427459-6427516)
chr1 (1-32)||(9828138-9828169)
chr1 (44-103)||(14359529-14359587)
chr1 (1-32)||(22881572-22881603)
chr1 (43-110)||(30359374-30359441)
chr1 (210-261)||(36033560-36033611)
chr1 (52-110)||(2288182-2288240)
chr1 (38-112)||(5376501-5376575)
chr1 (38-88)||(6612172-6612222)
chr1 (44-89)||(5927347-5927392)
chr1 (53-122)||(9828019-9828087)
chr1 (330-379)||(16119091-16119140)
chr1 (38-103)||(19058857-19058922)
chr1 (291-380)||(21623678-21623767)
chr1 (26-125)||(35919265-35919370)
chr1 (38-131)||(36878427-36878519)
chr1 (45-93)||(2283669-2283717)
chr1 (52-112)||(6427334-6427394)
chr1 (64-112)||(9103624-9103672)
chr1 (64-112)||(16812527-16812575)
chr1 (38-96)||(17778549-17778604)
[»] chr4 (44 HSPs)
chr4 (1-112)||(30298930-30299043)
chr4 (1-112)||(30327798-30327911)
chr4 (26-103)||(12895105-12895182)
chr4 (38-97)||(24613702-24613761)
chr4 (45-123)||(11596360-11596438)
chr4 (38-112)||(12797339-12797412)
chr4 (38-112)||(23292987-23293061)
chr4 (43-120)||(24543957-24544035)
chr4 (38-96)||(54580024-54580082)
chr4 (45-110)||(19482654-19482719)
chr4 (45-110)||(40481623-40481687)
chr4 (26-98)||(3947755-3947827)
chr4 (38-98)||(21945501-21945561)
chr4 (302-388)||(51978594-51978683)
chr4 (45-106)||(715615-715677)
chr4 (45-106)||(752941-753003)
chr4 (38-131)||(4157112-4157207)
chr4 (44-110)||(14126118-14126184)
chr4 (43-89)||(29205451-29205497)
chr4 (38-112)||(35157986-35158060)
chr4 (38-103)||(2361976-2362041)
chr4 (50-95)||(14465088-14465133)
chr4 (44-89)||(28964255-28964300)
chr4 (64-145)||(32273553-32273633)
chr4 (44-112)||(4383352-4383419)
chr4 (63-123)||(11110708-11110768)
chr4 (38-118)||(16073373-16073452)
chr4 (42-112)||(20633469-20633536)
chr4 (44-103)||(28084514-28084574)
chr4 (43-103)||(31800484-31800544)
chr4 (38-98)||(34306805-34306864)
chr4 (44-103)||(38847019-38847078)
chr4 (38-112)||(49431009-49431084)
chr4 (4-34)||(17210039-17210069)
chr4 (45-111)||(27706185-27706251)
chr4 (43-88)||(6485617-6485662)
chr4 (38-103)||(12895275-12895340)
chr4 (3-32)||(35239202-35239231)
chr4 (45-124)||(37203239-37203315)
chr4 (330-389)||(3929573-3929630)
chr4 (1-33)||(4383448-4383480)
chr4 (1-29)||(12884352-12884380)
chr4 (52-112)||(36635308-36635368)
chr4 (45-101)||(51701253-51701309)
[»] scaffold0011 (1 HSPs)
scaffold0011 (37-123)||(17749-17835)
[»] chr2 (34 HSPs)
chr2 (44-145)||(21374706-21374807)
chr2 (1-112)||(19536366-19536473)
chr2 (38-125)||(37558949-37559035)
chr2 (1-112)||(20539637-20539749)
chr2 (38-112)||(15657848-15657922)
chr2 (38-112)||(30717531-30717605)
chr2 (38-112)||(15972857-15972931)
chr2 (325-395)||(16021964-16022034)
chr2 (38-112)||(18421947-18422021)
chr2 (38-112)||(30335401-30335475)
chr2 (43-112)||(6940239-6940308)
chr2 (38-111)||(18841014-18841087)
chr2 (43-112)||(23718010-23718079)
chr2 (43-112)||(24105682-24105751)
chr2 (43-112)||(30404856-30404925)
chr2 (38-98)||(20473320-20473380)
chr2 (38-97)||(974746-974805)
chr2 (46-125)||(37419714-37419793)
chr2 (38-96)||(2438720-2438778)
chr2 (38-131)||(26769471-26769569)
chr2 (38-103)||(12668424-12668489)
chr2 (43-96)||(12940941-12940994)
chr2 (45-110)||(38117167-38117232)
chr2 (38-110)||(36756345-36756417)
chr2 (38-98)||(5040730-5040792)
chr2 (271-353)||(14117731-14117814)
chr2 (27-145)||(14996213-14996330)
chr2 (38-112)||(23058443-23058518)
chr2 (38-96)||(11223864-11223922)
chr2 (45-110)||(29176501-29176566)
chr2 (4-89)||(34691777-34691857)
chr2 (4-89)||(34714189-34714269)
chr2 (44-112)||(21091707-21091775)
chr2 (212-264)||(33599016-33599068)
[»] chr8 (37 HSPs)
chr8 (38-112)||(22651960-22652034)
chr8 (45-125)||(36450762-36450841)
chr8 (46-117)||(30271300-30271371)
chr8 (38-112)||(15816130-15816204)
chr8 (38-107)||(4298887-4298956)
chr8 (38-145)||(25566789-25566899)
chr8 (38-97)||(29447111-29447170)
chr8 (38-112)||(18170483-18170557)
chr8 (38-112)||(18634051-18634125)
chr8 (44-110)||(22197749-22197815)
chr8 (38-108)||(24613509-24613578)
chr8 (38-91)||(4948657-4948710)
chr8 (38-111)||(13436965-13437038)
chr8 (43-112)||(25192353-25192422)
chr8 (43-112)||(29510310-29510379)
chr8 (38-97)||(2572057-2572116)
chr8 (38-101)||(8342967-8343030)
chr8 (44-103)||(8343309-8343368)
chr8 (38-112)||(5813576-5813650)
chr8 (38-112)||(20873053-20873127)
chr8 (45-120)||(21465391-21465463)
chr8 (45-109)||(22595981-22596045)
chr8 (42-98)||(41831945-41832001)
chr8 (43-98)||(18407717-18407772)
chr8 (1-32)||(22652070-22652101)
chr8 (38-89)||(28745505-28745556)
chr8 (38-108)||(31556985-31557054)
chr8 (1-30)||(11803355-11803384)
chr8 (44-89)||(30077394-30077439)
chr8 (339-387)||(9706796-9706844)
chr8 (45-97)||(17468516-17468568)
chr8 (68-112)||(24196628-24196672)
chr8 (43-103)||(31236583-31236643)
chr8 (1-89)||(34897092-34897175)
chr8 (52-112)||(36934654-36934714)
chr8 (43-87)||(40332200-40332244)
chr8 (42-110)||(44067502-44067570)
[»] chr3 (45 HSPs)
chr3 (31-125)||(34910289-34910382)
chr3 (1-89)||(25948851-25948939)
chr3 (38-109)||(10954939-10955010)
chr3 (38-112)||(10335287-10335361)
chr3 (38-112)||(55401059-55401133)
chr3 (1-96)||(21256953-21257045)
chr3 (45-109)||(4987299-4987363)
chr3 (44-103)||(14209106-14209165)
chr3 (43-110)||(20503451-20503518)
chr3 (38-112)||(8587022-8587096)
chr3 (38-123)||(25775481-25775567)
chr3 (38-112)||(28917985-28918059)
chr3 (44-145)||(14216845-14216944)
chr3 (44-145)||(14222974-14223073)
chr3 (38-130)||(21479079-21479176)
chr3 (43-96)||(26508110-26508163)
chr3 (38-103)||(28812508-28812573)
chr3 (38-145)||(39756188-39756294)
chr3 (29-98)||(49651778-49651847)
chr3 (5-101)||(7928445-7928536)
chr3 (67-123)||(10318064-10318119)
chr3 (48-145)||(14747513-14747610)
chr3 (38-110)||(14829676-14829747)
chr3 (38-110)||(16000017-16000089)
chr3 (52-123)||(21305218-21305290)
chr3 (42-98)||(35994743-35994798)
chr3 (38-101)||(1509534-1509597)
chr3 (44-111)||(10268493-10268560)
chr3 (44-103)||(14832092-14832151)
chr3 (38-101)||(51206354-51206417)
chr3 (64-121)||(8412972-8413029)
chr3 (44-130)||(32400715-32400798)
chr3 (38-110)||(41961651-41961723)
chr3 (38-97)||(750619-750678)
chr3 (1-32)||(34910400-34910431)
chr3 (38-112)||(15796295-15796369)
chr3 (42-112)||(24205046-24205116)
chr3 (38-112)||(26492206-26492280)
chr3 (64-110)||(40052318-40052364)
chr3 (53-98)||(14979179-14979224)
chr3 (38-103)||(34185124-34185189)
chr3 (45-97)||(3164033-3164085)
chr3 (43-111)||(17005625-17005693)
chr3 (38-98)||(27505244-27505304)
chr3 (43-103)||(29508437-29508497)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-145)||(46628-46771)
[»] scaffold0103 (1 HSPs)
scaffold0103 (45-112)||(51795-51862)
[»] scaffold0361 (1 HSPs)
scaffold0361 (46-103)||(14523-14580)
[»] scaffold0018 (1 HSPs)
scaffold0018 (44-112)||(178825-178894)
[»] scaffold0223 (1 HSPs)
scaffold0223 (44-112)||(20156-20224)
[»] scaffold0306 (1 HSPs)
scaffold0306 (38-112)||(13384-13458)
[»] scaffold0152 (1 HSPs)
scaffold0152 (38-112)||(21869-21943)
[»] scaffold0007 (1 HSPs)
scaffold0007 (42-112)||(225273-225343)
[»] scaffold0246 (1 HSPs)
scaffold0246 (45-110)||(19562-19626)
[»] scaffold0122 (1 HSPs)
scaffold0122 (38-103)||(8003-8067)
[»] scaffold0025 (1 HSPs)
scaffold0025 (38-125)||(23740-23828)
[»] scaffold0793 (1 HSPs)
scaffold0793 (45-106)||(4891-4953)
[»] scaffold0652 (1 HSPs)
scaffold0652 (38-112)||(463-537)
[»] scaffold0053 (1 HSPs)
scaffold0053 (38-112)||(8782-8856)
[»] scaffold0311 (1 HSPs)
scaffold0311 (75-112)||(10509-10546)
[»] scaffold0004 (1 HSPs)
scaffold0004 (44-112)||(92791-92859)
[»] scaffold0171 (1 HSPs)
scaffold0171 (26-145)||(23373-23490)
[»] scaffold0021 (1 HSPs)
scaffold0021 (43-98)||(130480-130535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (45-103)||(7319-7377)
[»] scaffold0066 (1 HSPs)
scaffold0066 (49-103)||(33375-33429)
[»] scaffold0003 (1 HSPs)
scaffold0003 (38-112)||(241578-241652)
[»] scaffold0187 (1 HSPs)
scaffold0187 (210-263)||(4567-4620)
[»] scaffold0450 (1 HSPs)
scaffold0450 (38-98)||(8636-8696)
[»] scaffold0136 (1 HSPs)
scaffold0136 (44-88)||(3856-3900)
[»] scaffold0062 (1 HSPs)
scaffold0062 (224-264)||(332-372)
[»] scaffold0020 (1 HSPs)
scaffold0020 (38-110)||(135313-135385)


Alignment Details
Target: chr5 (Bit Score: 330; Significance: 0; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 1 - 448
Target Start/End: Complemental strand, 10298664 - 10298236
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtg 100  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  10298664 aagcacggacactcctcggattaggcgtgtccgatacgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcg 10298565  T
Q  101 tgttagtgtccggtgtccgtgtccgcatccgcatccgtgcttcatggtcatactccctctcaaatccacattcctttttaagtgtctcttctgctcaaga 200  Q
    ||||||||||||                   |||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||  ||||    
T  10298564 tgttagtgtccg-------------------catccgtgcttcatggtcatactccctctccaatcctcattcctttttaagtgtcgcttctgcagaaga 10298484  T
Q  201 attctttcatatttatttgttgtttttaaattttaatgcaacattaactattattttgtcaatattgcaaagagataagtagatagaacaagataataaa 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10298483 attctttcatatttatttgttgtttttaaattttaatgcaacattaactattattttgtcaatattgcaaagggataagtagatagaacaagataataaa 10298384  T
Q  301 aagttaagggtataatagaaaaagaaatgatttcatcaaaagtaacgaaatttactagttttcttattatgtgtaaataatcttaaaacgacaataagaa 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  10298383 aagttaagggtataatagaaaaagaaatgatttcatcaaaagtaacgaaatttactagttttcttattatgtgtaaataatattaaaacaacaataagaa 10298284  T
Q  401 ggaacggacggaatatttttacctgttgactatgatggcctttttatt 448  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  10298283 ggaacggacggagtatttttacctgttgactatgatgacctttttatt 10298236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 9747151 - 9747218
Alignment:
Q  197 aagaattctttcatatttatttgttgtttttaaattttaatgcaacattaactattattttgtcaata 264  Q
    |||||||| |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9747151 aagaattcgttcatacttatttgtcgtttttaaattttaatgcaacattaactattattttgtcaata 9747218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8420117 - 8419992
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtg 100  Q
    ||||||||| |||||||| ||||| || ||||||     || |||||||||||||||||||| ||||||| | |||||||||||||||| | |||||| |    
T  8420117 aagcacggatactcctcgaattaggcgcgtccga-----caccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcg 8420023  T
Q  101 tgttagtgtccggtgtccgtgtccgcatccg 131  Q
    ||| | ||||||||||||||||||| |||||    
T  8420022 tgtcattgtccggtgtccgtgtccgtatccg 8419992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 21351906 - 21351979
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    |||| ||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||| |||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtcc 21351979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 31084393 - 31084309
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||| | |||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||| |||| ||||||    
T  31084393 cgtgtccgacacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 274 - 346
Target Start/End: Original strand, 9747249 - 9747320
Alignment:
Q  274 gataagtagatagaacaagataataaaaagttaagggtataatagaaaaagaaatgatttcatcaaaagtaac 346  Q
    ||||| ||||| ||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  9747249 gataaatagatggaacaagataataaaaa-ttaagggtattatagaaaaagaaataatttcatcaaaagtaac 9747320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 42893418 - 42893353
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgt 42893353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 6247680 - 6247609
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||    
T  6247680 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtgt 6247609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 366 - 448
Target Start/End: Complemental strand, 10290200 - 10290118
Alignment:
Q  366 attatgtgtaaataatcttaaaacgacaataagaaggaacggacggaatatttttacctgttgactatgatggcctttttatt 448  Q
    |||||||||||||||| ||||||||| ||||| |||||||| ||| | ||||||| ||||||||| |||||| ||||| ||||    
T  10290200 attatgtgtaaataattttaaaacgaaaataaaaaggaacgaacgtactatttttgcctgttgaccatgatgacctttatatt 10290118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 21191057 - 21191131
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||  ||| ||||||||    
T  21191057 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccg 21191131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 14674322 - 14674253
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||||| |  ||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  14674322 cgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 14674253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 15405062 - 15405119
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||    
T  15405062 gacacttgtaattacattgaattatatgattttttcaaattattagttgtgtcagtgt 15405119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 9 - 112
Target Start/End: Original strand, 13287366 - 13287474
Alignment:
Q  9 acactcctcggattagacgtgtccgataggacaa-----cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||| |||||| ||||||||| ||||||      ||||||||||| ||||| || ||||||||| |||||||||||||||  |||||||  ||||    
T  13287366 acactcctcagattaggcgtgtccgacaggacacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgt 13287465  T
Q  104 tagtgtccg 112  Q
    |||||||||    
T  13287466 tagtgtccg 13287474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 39698593 - 39698525
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||||||||||| || ||||||||| |||||||||||||||| |||||| | |||| ||||||||    
T  39698593 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccg 39698525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 163 - 225
Target Start/End: Complemental strand, 10290264 - 10290202
Alignment:
Q  163 aatccacattcctttttaagtgtctcttctgctcaagaattctttcatatttatttgttgttt 225  Q
    ||||| ||||||||||||| |||| |||||||  |||||||| ||||||||||||||||||||    
T  10290264 aatcctcattcctttttaaatgtcgcttctgcataagaattcgttcatatttatttgttgttt 10290202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 41995515 - 41995457
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||| |||| ||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtgtc 41995457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 95
Target Start/End: Original strand, 21576746 - 21576803
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgt 95  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||    
T  21576746 gacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgt 21576803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 33178083 - 33178018
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| ||||||||||||||||| |  ||||||||| ||||| ||||||||||||||||||| ||||    
T  33178083 gacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgt 33178018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 41633800 - 41633728
Alignment:
Q  31 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||| |||| ||||| ||||||||||| || ||||||| | |||||||||||||||| |||||||| ||||    
T  41633800 ccgatacgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgt 41633728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 101
Target Start/End: Original strand, 5894823 - 5894897
Alignment:
Q  27 gtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    |||||||| | |||| ||||||||||| ||| |||  ||||| ||| ||||||||||||||||||||||| ||||    
T  5894823 gtgtccgacacgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtccgtgt 5894897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 21522808 - 21522734
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||| ||||||||||| || ||||||| | ||||| |||||||||| |||||||| |||| ||||||||    
T  21522808 gacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccg 21522734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 21533374 - 21533300
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||| ||||||||||| || ||||||| | ||||| |||||||||| |||||||| |||| ||||||||    
T  21533374 gacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccg 21533300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 30135372 - 30135306
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgt 103  Q
    |||| ||||||||||||||||| ||  |||||||| ||||| |||||||||||||||||||| ||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgt 30135306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 7677763 - 7677702
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggt 99  Q
    |||| |||||||| ||||| || || ||||||||| |||||||||||||||| |||||||||    
T  7677763 gacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtcggt 7677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 123
Target Start/End: Original strand, 17925189 - 17925258
Alignment:
Q  54 attacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 123  Q
    ||||||||| ||||||||| ||| | ||||||||| ||  |||||| ||| |||||||||||||||||||    
T  17925189 attacattgaattatgtgattttcttaaattattatttaggtcggtatgtcagtgtccggtgtccgtgtc 17925258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 21542088 - 21542028
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||| ||||||||||||||||| || ||||||| |  |||| |||||||||||||||||||    
T  21542088 gacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcgg 21542028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 3966561 - 3966474
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||| |||||| | |||||||| || ||| ||||| ||| ||||||||||||  |||||||  ||| ||||||| |||||||||||||    
T  3966561 gacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtccagtgtccgtgtccg 3966474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3966628 - 3966597
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtcc 32  Q
    ||||||||||||||||||||||||||||||||    
T  3966628 aagcacggacactcctcggattagacgtgtcc 3966597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 4105310 - 4105241
Alignment:
Q  45 acacttgtaattacattgtattatgtgac--tttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||| || |||||||||   |||||||||||||||||| |||||| |||| ||| ||||    
T  4105310 acacttgtaattacactgaattatgtgatcttttttcaaattattagttatgtcggcgtgtcagtatccg 4105241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 97
Target Start/End: Complemental strand, 12160005 - 12159951
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    ||||| |||||||||||||  ||||||||  ||||| ||||||||||||||||||    
T  12160005 cgacatttgtaattacattaaattatgtgttttttttaaattattagttgtgtcg 12159951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 18316951 - 18316989
Alignment:
Q  63 tattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  18316951 tattatgtgattttttaaaattattagttgtgtcggtgt 18316989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 19579759 - 19579685
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||||||||| || |  ||||||||| ||| |||||||||||| |||||||| || | ||||||||    
T  19579759 gacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccg 19579685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 109
Target Start/End: Original strand, 24906307 - 24906373
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    ||||||||||||||||| || ||||||| | |||||||||||||||  ||||| || |||| |||||    
T  24906307 cgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtgt 24906373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 37328845 - 37328919
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||| |||||||||| || ||| ||||| |||| ||||||||| | ||||||||||| | ||||||||    
T  37328845 gacaccgacacatgtaattacactgaattttgtgatttttacaaattatttgctgtgtcggtgtatcagtgtccg 37328919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 17177029 - 17177098
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||||| || ||| | ||| |||||||||||||||| ||||| || || | ||||||||    
T  17177029 cgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtgtccg 17177098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 121
Target Start/End: Complemental strand, 30098370 - 30098301
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtg 121  Q
    ||||||||||| ||||||||| ||| |||||||||||   || |||  |||| |||||||||||||||||    
T  30098370 taattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccggtgtccgtg 30098301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 6770575 - 6770527
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||| ||| | ||||||||||||||||| |||||| ||||||||    
T  6770575 attatgtgattttcttaaattattagttgtgtcagtgtgtcagtgtccg 6770527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 19552570 - 19552618
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||| |||||||||||||||  |||||||| |||| ||||||||    
T  19552570 attatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 19552618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 30183607 - 30183547
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||| ||||||||||||||| |  | || ||||||  ||||||||||||||||||||||||    
T  30183607 gacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtcgg 30183547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 43001851 - 43001807
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    ||||||||||||||| || ||||||| | ||||||||||||||||    
T  43001851 acacttgtaattacactgaattatgtaattttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 7801157 - 7801250
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccg 131  Q
    |||| ||||||||||||||||  || ||||||||| ||||||||||||||||||||||||| |||||||||| |||| |||||||||| |||||    
T  7801157 gacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgttcggtatccgtgtccgtatccg 7801250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 426483 - 426589
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtg 100  Q
    ||||||||||||||||| |||||| |||||||||     || |||||||||||||||||||  ||||||||| |||||||||||||||  |||||||| |    
T  426483 aagcacggacactcctcagattaggcgtgtccga-----caccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcg 426577  T
Q  101 tgttagtgtccg 112  Q
    ||| ||||||||    
T  426578 tgtcagtgtccg 426589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 12696394 - 12696277
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    ||||||||| | ||||  |||||||||||||||| || ||||||| | |||||||||||||||| |||||||| |||| ||||||| |||| ||||||||    
T  12696394 cgtgtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgt-cgtgtccg 12696297  T
Q  126 catccgcatccgtgcttcat 145  Q
      |||| |||||||||||||    
T  12696296 tgtccgtatccgtgcttcat 12696277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 28715353 - 28715243
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt--gt-tagtgtccggtgtccgtgtccgcatccgcat 134  Q
    |||| ||||||||||||||||| || ||||||| | ||||||||||||||||  ||||| ||||  || | |||||||||||||||||||| ||||| ||    
T  28715353 gacaccgacacttgtaattacactgaattatgtcattttttcaaattattagccgtgtcagtgtccgtatcgtgtccggtgtccgtgtccgtatccgtat 28715254  T
Q  135 ccgtgcttcat 145  Q
    |||||||||||    
T  28715253 ccgtgcttcat 28715243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 1681811 - 1681745
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    ||||||||||||||||| || |||| |||| ||||||||||||||||||||||||| ||||||||||    
T  1681811 cgacacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtgt 1681745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 2117170 - 2117069
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtg 100  Q
    ||||||||||||||||| |||||| | ||||||| | |||| |||||||| ||||| ||||| ||||||||| ||||||||||||||||  ||||||| |    
T  2117170 aagcacggacactcctccgattaggcatgtccgacacgaca-cgacacttataattgcattgaattatgtgattttttcaaattattagaggtgtcggag 2117072  T
Q  101 tgt 103  Q
    |||    
T  2117071 tgt 2117069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 9107371 - 9107445
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||| ||||| |||||||||||||||| |||||||| |||||||||||||    
T  9107371 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccg 9107445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 15489733 - 15489807
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||||||||||||||| ||| ||| | ||||||||||||||||||||||||  |||||||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccg 15489807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 34595192 - 34595118
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||||||||||||||||| |||| | ||||||    
T  34595192 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccg 34595118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 10770675 - 10770748
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||||||||| || |||| |||||||    
T  10770675 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtgtcc 10770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 38 - 111
Target Start/End: Complemental strand, 16766755 - 16766682
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||||    
T  16766755 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 16766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 8776981 - 8777086
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg----gtgtccg-tgtccgcatccgcatccgtg 139  Q
    ||||||||||||||| || ||| ||||| ||||||||||||||||||||||||| |||| ||||||||    ||||||| ||||||  |||| |||||||    
T  8776981 acacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccgttgtccgtgtccgtatccgtg 8777080  T
Q  140 cttcat 145  Q
    ||||||    
T  8777081 cttcat 8777086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 16833361 - 16833294
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||||||||||| || | ||||||| ||||||||||||||||||||||||| |||| ||||||    
T  16833361 cgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 16833294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 8365520 - 8365594
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||||||||||||  | |||||||||  |||||||||||||||||||||||| |||| ||||||||    
T  8365520 gacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtccg 8365594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 17302615 - 17302543
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    ||||| ||||||||||||||||||| |||||||||  ||||||||||||||||||||||| | |||| |||||    
T  17302615 gacaatgacacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtgt 17302543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 7938214 - 7938101
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtc-cgata--ggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    ||||||||||||||||||||| || |||||| || |   ||||| |||||||| |||||||| |  ||||| ||| |||||||||||||||| |||||||    
T  7938214 aagcacggacactcctcggatcaggcgtgtctcggtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcg 7938115  T
Q  98 gtgtgttagtgtcc 111  Q
    | |||| |||||||    
T  7938114 gcgtgtcagtgtcc 7938101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 46 - 112
Target Start/End: Original strand, 17841598 - 17841664
Alignment:
Q  46 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||||||||| |  ||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  17841598 cacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 17841664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 28152156 - 28152083
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| | |||||| |||| ||||||||    
T  28152156 gacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagctttgtcggcgtgtcagtgtccg 28152083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 109
Target Start/End: Complemental strand, 31959212 - 31959146
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||| |||| ||| |||| |||||    
T  31959212 cgacacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgt 31959146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 853860 - 853925
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| |||||||||||||| || |  ||||||||| ||||||||||||||||||||||||| ||||    
T  853860 gacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtcggcgtgt 853925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 7977831 - 7977896
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| ||||||||||||||||| || ||||||| | |||||||||||||||| |||||||| ||||    
T  7977831 gacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgt 7977896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 31384972 - 31384923
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgt 93  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||    
T  31384972 gacacttgtaattacactgaattatgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 43 - 98
Target Start/End: Original strand, 1191706 - 1191761
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    ||||||||||||||||| || ||| ||||| |||||||||||||||| ||||||||    
T  1191706 cgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtcgg 1191761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 4878001 - 4877935
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgt 103  Q
    |||| ||||||||||||||| | |  ||||||||||||||| ||||||||||| |||||||||||||    
T  4878001 gacaccgacacttgtaattatacttaattatgtgacttttttcaaattattagctgtgtcggtgtgt 4877935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 7027300 - 7027206
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccg 131  Q
    |||| |||||| | |||||||| || ||||||||| ||||| |||||||| ||  ||||||| || |||||||||| |||||||||||| |||||    
T  7027300 gacaccgacacatataattacactgaattatgtgatttttttcaaattatcaggggtgtcggcgtattagtgtccgatgtccgtgtccgtatccg 7027206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 45 - 88
Target Start/End: Original strand, 4118341 - 4118384
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattatta 88  Q
    |||||||||||||||||  ||||||||| |||||||||||||||    
T  4118341 acacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 131
Target Start/End: Original strand, 34225824 - 34225906
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgt-gtta--gtgtccggtgtccgtgtccgcatccg 131  Q
    |||||||| || |||||| || ||||||||||||||||||||||| ||||  |||  |||||| ||||||||||||| |||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgtcagtgtccttatcgtgtccagtgtccgtgtccgtatccg 34225906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 3398676 - 3398603
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||| |||| |||||||| || ||||| ||| |||||||||||||||| |||||||| |||| ||||||||    
T  3398676 gacaccgatacttataattacactgaattatatga-tttttcaaattattagctgtgtcggcgtgtcagtgtccg 3398603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 7930363 - 7930289
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||| |||| || |  ||||||||| ||||||||||||||| |||||||||  ||| ||||||||    
T  7930363 gacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtgtccg 7930289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 9522944 - 9522898
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    ||||||||||||||||| || ||||||||| ||||| ||||||||||    
T  9522944 cgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 33001290 - 33001355
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| |||||| | ||||||||||  ||||||||| ||||||||||||||||  ||||||| ||||    
T  33001290 gacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgt 33001355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 5970120 - 5970168
Alignment:
Q  49 ttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    ||||||||||| || ||||||||| |||||||||||||||  |||||||    
T  5970120 ttgtaattacactgaattatgtgattttttcaaattattaactgtgtcg 5970168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 24115862 - 24115906
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||||| |||| ||||||||| ||||| |||||||||||||||||    
T  24115862 taattatattgaattatgtgattttttgaaattattagttgtgtc 24115906  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 30866150 - 30866210
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||| | ||||||||||| ||||||||| ||| ||||||||||||  |||| |||||||    
T  30866150 cgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgt 30866210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 123
Target Start/End: Original strand, 9408328 - 9408420
Alignment:
Q  31 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 123  Q
    |||||| |||| ||||||||||||||||| |  ||||||||| ||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  9408328 ccgatacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtctggtgtccgtgtc 9408420  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 35862016 - 35861951
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    |||||||  |||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||    
T  35862016 gacacttacaattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtgt 35861951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 102
Target Start/End: Complemental strand, 3991382 - 3991318
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtg 102  Q
    |||| ||||||||||||||| | || ||||||||| |||||||||||||||||||||||||||||    
T  3991382 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtcggtgtg 3991318  T

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Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 11061077 - 11061151
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||| | |  ||||||||| |||||||||||||||| ||||||||||||| ||||||||    
T  11061077 gacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccg 11061151  T

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Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 18215187 - 18215261
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||||||| |||| || ||||||||| |||||||||||||||| || ||||| |||||||||||||    
T  18215187 gacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccg 18215261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 145
Target Start/End: Complemental strand, 24105731 - 24105631
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccgcatccgtgctt 142  Q
    ||||||||||||||||| || || |||  | |||||||||||||||| |||||||| |||| ||||||| |||| |||||||| ||||| ||||||||||    
T  24105731 cgacacttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgt-cgtgtccgtatccgtatccgtgctt 24105634  T
Q  143 cat 145  Q
    |||    
T  24105633 cat 24105631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 13770760 - 13770675
Alignment:
Q  27 gtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||| | |||||||||||||||||||||| || ||||||| | ||||| |||||||||| |||||||| || | ||||||||    
T  13770760 gtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccg 13770675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 24339700 - 24339635
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||    
T  24339700 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 24339635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 7438764 - 7438704
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||  ||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcgg 7438704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 9778569 - 9778462
Alignment:
Q  27 gtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt--gt-tagtgtccggtgtccgtgtc 123  Q
    |||||||| | |||| ||||||||||||||| | || ||||||||| ||||||||||||| || |||||| ||||  || | ||||||||||||||||||    
T  9778569 gtgtccgacacgacaccgacacttgtaattatactgaattatgtgattttttcaaattatcagctgtgtcagtgtccgtgtcgtgtccggtgtccgtgtc 9778470  T
Q  124 cgcatccg 131  Q
    || |||||    
T  9778469 cgtatccg 9778462  T

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Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 25481953 - 25481895
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||    
T  25481953 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 25481895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 27945099 - 27945025
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||||||| | ||| ||||||||||||| ||||||| |||| ||||||||    
T  27945099 gacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccg 27945025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 26 - 111
Target Start/End: Original strand, 5409825 - 5409910
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    ||||||||| | |||| |||||||||||||| || || ||||||||| |||||||||||||||| ||| || | |||| |||||||    
T  5409825 cgtgtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtcc 5409910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 8234196 - 8234139
Alignment:
Q  46 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||| |||| || ||||||| | ||||||||||||||||||||||||||||||    
T  8234196 cacttgtaactacactgaattatgttattttttcaaattattagttgtgtcggtgtgt 8234139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 109
Target Start/End: Original strand, 32094009 - 32094093
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    ||||||||| | |||| ||||| ||||||||||| || |||||||||  |||||||||||||||||||||| ||  |||||||||    
T  32094009 cgtgtccgacacgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgttggcatgttagtgt 32094093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 43027470 - 43027576
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtcc-gcatccgcatcc 136  Q
    |||| ||||||||||| ||||| || ||||||||| |||||||||||||||| || ||||  |||| |||||||| |||| |||||| |  |||||||||    
T  43027470 gacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccg-tgtc-gtgtccagtgtccgcatcc 43027567  T
Q  137 gtgcttcat 145  Q
    |||||||||    
T  43027568 gtgcttcat 43027576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 11665441 - 11665528
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||| |||||||| |||||| | || ||||||||| ||||||||||||||||||||||| | |||| | | ||| |||||||| ||||    
T  11665441 gacatcgacacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtcaatatccagtgtccgtatccg 11665528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 33994270 - 33994199
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    |||| |||||||||||||| || || |||||||||| ||||||||||| |||||| ||||| |||| |||||    
T  33994270 gacaccgacacttgtaattgcactgaattatgtgaccttttcaaattagtagttgcgtcggcgtgtcagtgt 33994199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 11831481 - 11831404
Alignment:
Q  47 acttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    ||||||||||||| |  ||||| ||| |||||||||||||||||||||||| |||| | |||||| |||||||| ||||    
T  11831481 acttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtg-tcgtgtccagtgtccgtatccg 11831404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Original strand, 26033467 - 26033513
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||    
T  26033467 cgacacttgtaattacactgaattatgtgattttttcaaattattag 26033513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 7197298 - 7197363
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| |||||||||||||||||||| ||||  ||| ||||| |||||||||| |||||||| ||||    
T  7197298 gacaccgacacttgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgt 7197363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 6630913 - 6630985
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||| |||||| | |||||||| || |||| |||||||| ||||||||||||| ||||||| |||| ||||||    
T  6630913 gacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 25822720 - 25822648
Alignment:
Q  31 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||| |||| ||||||||||||||||| || ||| ||    ||||||||||||||||||||||||| ||||    
T  25822720 ccgatacgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgt 25822648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 1433573 - 1433542
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtcc 32  Q
    ||||||||||||||||||||||||||||||||    
T  1433573 aagcacggacactcctcggattagacgtgtcc 1433542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 11272587 - 11272649
Alignment:
Q  38 gacaacgacacttgtaattacattgtattat--gtgactttttcaaattattagttgtgtcgg 98  Q
    |||| ||||||||||||||||| || |||||  |||| ||||||||||||| |||||||||||    
T  11272587 gacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcgg 11272649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 29763201 - 29763247
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||| ||||||||||||| |||||||| ||||||| ||||||    
T  29763201 attatgtgattttttcaaattataagttgtgttggtgtgtcagtgtc 29763247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 43250047 - 43249977
Alignment:
Q  42 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||| |||||||| |||||||||| | ||| |||||||||||   ||||||| |||| ||||||||    
T  43250047 acgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccg 43249977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 210 - 260
Target Start/End: Original strand, 48522878 - 48522928
Alignment:
Q  210 tatttatttgttgtttttaaattttaatgcaacattaactattattttgtc 260  Q
    ||||||||| |  |||||||| |||||||||||||||| ||||||||||||    
T  48522878 tatttatttatcatttttaaagtttaatgcaacattaattattattttgtc 48522928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 18035810 - 18035839
Alignment:
Q  1 aagcacggacactcctcggattagacgtgt 30  Q
    ||||||||||||||||||||||||||||||    
T  18035810 aagcacggacactcctcggattagacgtgt 18035839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 65 - 110
Target Start/End: Complemental strand, 21826304 - 21826259
Alignment:
Q  65 ttatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||||||| ||||| ||||||||||| ||||||| |||||||||||    
T  21826304 ttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtc 21826259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 7058477 - 7058429
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgt 93  Q
    ||||||||||||||| || ||||  ||| ||||||||||||||||||||    
T  7058477 acacttgtaattacactgaattacatgattttttcaaattattagttgt 7058429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 10042969 - 10042921
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||| ||| ||||||||||||| ||||||| |||| ||||||||    
T  10042969 attatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccg 10042921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 31 - 110
Target Start/End: Complemental strand, 21560568 - 21560484
Alignment:
Q  31 ccgataggacaacgacacttgtaattacattgtattatgtgacttt-----ttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||||| |||| ||||||||||||||||| || ||||||||| |||     ||||||||||||| ||| |||| |||| ||||||    
T  21560568 ccgatacgacaccgacacttgtaattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtgtcagtgtc 21560484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 112
Target Start/End: Original strand, 29787384 - 29787444
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||| || ||||||||| ||| ||||||||||||  ||||||| |||||| ||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgttaatgtccg 29787444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 40287363 - 40287422
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||||||||||| || || || ||| |||||||||||||| |||||||||| ||||    
T  40287363 cgacacttgtaattacactgaat-atatgattttttcaaattattcgttgtgtcggcgtgt 40287422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 46392649 - 46392597
Alignment:
Q  210 tatttatttgttgtttttaaattttaatgcaacattaactattattttgtcaa 262  Q
    ||||||||||| ||||| ||| || ||||||||||||||||  ||||||||||    
T  46392649 tatttatttgtcgttttcaaagttcaatgcaacattaactaggattttgtcaa 46392597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 82
Target Start/End: Complemental strand, 48438604 - 48438560
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaa 82  Q
    |||| |||||| ||||||||||||| ||||||||| |||||||||    
T  48438604 gacaccgacacgtgtaattacattgaattatgtgattttttcaaa 48438560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 32434723 - 32434798
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggt-gtgttagtgtccggtgtcc 118  Q
    |||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  32434723 gacacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtcggtggtgtcagtgtccggtgtcc 32434798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 38 - 145
Target Start/End: Original strand, 38078662 - 38078769
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtcc-gtgtccgcatccgcatcc 136  Q
    |||| |||||||||||||||||||| ||||||||| |||||||||||||||| |||||||  |||| ||||| | |||||| |||||||  |||| ||||    
T  38078662 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgttc-gtgtccggtgtccgtgtccgtatcc 38078760  T
Q  137 gtgcttcat 145  Q
    |||||||||    
T  38078761 gtgcttcat 38078769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 37598889 - 37598803
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||| |||||||| |||||||| || ||| ||||| ||||||||||||||||||||||||| |||| ||||||||||||| |||||||    
T  37598889 gacaccgacacttataattacactgaatt-tgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccggtgtctgtgtccg 37598803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 22881617 - 22881689
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||| ||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||| |||| ||||||    
T  22881617 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 31672896 - 31672979
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtg 121  Q
    |||| ||| ||||||||||||| || |||| |||| |||||||||||||||| ||||||||||||| ||||||| || ||||||    
T  31672896 gacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtcccgtatccgtg 31672979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 40258934 - 40258997
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||||||    
T  40258934 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattaattgtgtcggtgt 40258997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 1704993 - 1705067
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||  || ||||||||| |||||||||||||||| |||||||||||||  |||||||    
T  1704993 gacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccg 1705067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 24577187 - 24577245
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||||||||||    
T  24577187 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtc 24577245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 48450555 - 48450662
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtg 100  Q
    ||||||||||||||||||||||||||||||||  |  | |  ||||||||||||||||| |  ||||||| | |||||||||||||||| ||||| || |    
T  48450555 aagcacggacactcctcggattagacgtgtcctgt--gtc--cgacacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcg 48450650  T
Q  101 tgttagtgtccg 112  Q
    ||| ||||||||    
T  48450651 tgtcagtgtccg 48450662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 28273083 - 28273147
Alignment:
Q  32 cgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||||||||| ||||||||||||||||| || ||||| ||| |||||||||| ||||||||||||    
T  28273083 cgataggacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtc 28273147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 112
Target Start/End: Complemental strand, 1815316 - 1815241
Alignment:
Q  37 ggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||| ||||||||||||||||| || ||||||||| ||||| |||| |||| ||||||||| |||| ||||||||    
T  1815316 ggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccg 1815241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 46348384 - 46348470
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||| ||||||||||||||||| |  ||||| ||| |||||||||||||||| |||||||| |||| ||||||| |||||||| ||||    
T  46348384 gacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtatccg 46348470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 103
Target Start/End: Complemental strand, 113350 - 113292
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| |||||||| ||||    
T  113350 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgt 113292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 26 - 96
Target Start/End: Original strand, 1486698 - 1486768
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    ||||||||| | |||| |||||||| |||||||| || ||||||||| |||||||||||||||| ||||||    
T  1486698 cgtgtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtc 1486768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 18556466 - 18556543
Alignment:
Q  47 acttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||||||||||||||  |||||||||  ||||||||||||||| |||||||| |||| ||||||| |||||||| ||||    
T  18556466 acttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtatccg 18556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 24334669 - 24334799
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatg-tgactttttcaaattattagttgtgtcggt 99  Q
    ||||||||||||| || ||||||| |||| |   |  |||| ||||||||||||||||| || ||||||     |||||||||| ||||| |||||||||    
T  24334669 aagcacggacactacttggattaggcgtgacgtgtccgacaccgacacttgtaattacactgaattatgcattttttttcaaatgattagctgtgtcggt 24334768  T
Q  100 gtgttagtgtccggtgtccgtgtccgcatcc 130  Q
    ||||  |||||||||||||||||||| ||||    
T  24334769 gtgtccgtgtccggtgtccgtgtccgtatcc 24334799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 32461471 - 32461529
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||| ||| ||||    
T  32461471 acacttgtaattacattaaattatgtgattttttcaaattattagttgtgccggcgtgt 32461529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 42359450 - 42359524
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||| ||||| |||||||||||||||| |||||| | |||| ||||||||    
T  42359450 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagatgtgtcagcgtgtcagtgtccg 42359524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 52 - 145
Target Start/End: Original strand, 398780 - 398878
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg----gtgtcc-gtgtccgcatccgcatccgtgcttcat 145  Q
    |||||||| || ||||||||| ||||||||||||||||  ||||||| |||| ||||||||    |||||| |||||||| |||| |||||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccgcgtccgtatccgtgcttcat 398878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 21378631 - 21378571
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||||||||||| || ||||||| | |||||||| ||||||| |||||||||||||    
T  21378631 cgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgt 21378571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 47989555 - 47989484
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||| ||||||||||||||||| || ||||||||| ||||| ||||||||| ||||||||| |||| ||||||    
T  47989555 gacaccgacacttgtaattacactgaattatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtgtc 47989484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 3490352 - 3490497
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccga---taggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    ||||||||||||| ||||||||||| |||||| |   | ||||| ||||||||||||||||| || || ||||   ||| ||||||||||||  ||||||    
T  3490352 aagcacggacacttctcggattagatgtgtcccaatgtcggaca-cgacacttgtaattacactgaataatgtagttttctcaaattattagcagtgtcg 3490450  T
Q  98 gtgtgttagtgtccggtgtcc-gtgtccgcatccgcatccgtgcttcat 145  Q
    | |||| ||||||  |||||| ||||| | ||||| |||||||||||||    
T  3490451 gcgtgtcagtgtc--gtgtccggtgtctgtatccgtatccgtgcttcat 3490497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 6332728 - 6332666
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    |||| ||| ||||||||||||| || ||||||||| ||||||||||||||||||||||| ||||    
T  6332728 gacaccgatacttgtaattacactgaattatgtga-tttttcaaattattagttgtgtccgtgt 6332666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 18190109 - 18190167
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||| ||||||||||||||||| || ||||||| | |||||||||||||||| ||||||    
T  18190109 gacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgtgtc 18190167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 22515888 - 22515946
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| ||||||    
T  22515888 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtc 22515946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 87
Target Start/End: Complemental strand, 18337387 - 18337338
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattatt 87  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||||||    
T  18337387 gacaccgacacttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 38503385 - 38503304
Alignment:
Q  31 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||| |||||| | |||||||| || | ||| ||| ||| ||||||||||||  |||||||||||||||||||||    
T  38503385 ccgacaggacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccg 38503304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 51410083 - 51410022
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcgg 98  Q
    |||| ||||||||||||||||| || |||||||||  |||||||||||||||| ||||||||    
T  51410083 gacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagatgtgtcgg 51410022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 31015096 - 31015044
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgt 95  Q
    ||||||||||||||||| || ||||||||| ||| |||||||||||| |||||    
T  31015096 cgacacttgtaattacactgaattatgtgattttctcaaattattagctgtgt 31015044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 34298480 - 34298420
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||| || ||||||||| ||| ||||||||||||| |||||||||||| ||| ||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccg 34298420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 5898211 - 5898242
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtcc 32  Q
    ||||||||||||||||||||||||||||||||    
T  5898211 aagcacggacactcctcggattagacgtgtcc 5898242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 6427516 - 6427459
Alignment:
Q  44 gacacttgtaattacattgtattatgtgacttttt---caaattattagttgtgtcgg 98  Q
    |||||||||| |||||||| ||||||||| |||||   ||||||||||||||||||||    
T  6427516 gacacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtcgg 6427459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 9828169 - 9828138
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtcc 32  Q
    ||||||||||||||||||||||||||||||||    
T  9828169 aagcacggacactcctcggattagacgtgtcc 9828138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 14359529 - 14359587
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||| |||||||| ||||    
T  14359529 gacacttgtaattacactaaattatgtga-tttttcaaattattagctgtgtcggcgtgt 14359587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 22881572 - 22881603
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtcc 32  Q
    ||||||||||||||||||||||||||||||||    
T  22881572 aagcacggacactcctcggattagacgtgtcc 22881603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 30359441 - 30359374
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||| | ||||| |  ||||||||| ||||||||||||| ||||||| |||||||| ||||||    
T  30359441 cgacacttgcagttacactaaattatgtgattttttcaaattatcagttgtgccggtgtgtcagtgtc 30359374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 261
Target Start/End: Original strand, 36033560 - 36033611
Alignment:
Q  210 tatttatttgttgtttttaaattttaatgcaacattaactattattttgtca 261  Q
    ||||||||| |||||||| || |||||| ||| |||||||||||||||||||    
T  36033560 tatttatttattgttttttaaatttaattcaatattaactattattttgtca 36033611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 2288182 - 2288240
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||||| ||||||||| ||| | ||||||||| |  ||||||||||||||||||    
T  2288182 taattacattgaattatgtgattttcttaaattattattgttgtcggtgtgttagtgtc 2288240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 5376501 - 5376575
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||| |||||||| || ||||||| | ||| | ||||||||||  ||||||| |||||||||||||    
T  5376501 gacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccg 5376575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 88
Target Start/End: Original strand, 6612172 - 6612222
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattatta 88  Q
    |||| ||||||||||||||||| || ||||||| | |||||||||||||||    
T  6612172 gacaccgacacttgtaattacactgaattatgtaattttttcaaattatta 6612222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 5927347 - 5927392
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    ||||||||||||||||||  ||||| ||| ||||||||||||||||    
T  5927347 gacacttgtaattacattaaattatatgattttttcaaattattag 5927392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 9828087 - 9828019
Alignment:
Q  53 aattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgt 122  Q
    ||||||| || ||||||||| ||| ||||||||||||| ||||||| ||| | |||||||||||| ||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcgtg-tcgtgtccggtgtctgtgt 9828019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 379
Target Start/End: Original strand, 16119091 - 16119140
Alignment:
Q  330 atttcatcaaaagtaacgaaatttactagttttcttattatgtgtaaata 379  Q
    ||||||||||||||||| ||||||| |  ||||||| |||||||||||||    
T  16119091 atttcatcaaaagtaacaaaatttaatgtttttcttgttatgtgtaaata 16119140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 19058857 - 19058922
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| ||||||||||||||||| || ||||||| |  |||| |||||||||| |||||||| ||||    
T  19058857 gacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgt 19058922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 380
Target Start/End: Original strand, 21623678 - 21623767
Alignment:
Q  291 agataataaaaagttaagggtataatagaaaaagaaatgatttcatcaaaagtaacgaaatttactagttttcttattatgtgtaaataa 380  Q
    |||||||||| | |||||||||| | ||||||||| |   |||||||||||||||| |||||||   ||||||||  | |||||||||||    
T  21623678 agataataaatatttaagggtattaaagaaaaagacacactttcatcaaaagtaacaaaatttatcggttttcttggtttgtgtaaataa 21623767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 35919265 - 35919370
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgacttttt-----caaattattagttgtgtcggtgtgttagtgtccg-gtgtccg 119  Q
    ||||||||| | ||||  ||||||| |||||||| || ||||||||| |||||     ||||||||||| |||||||| ||||| ||||||| ||||| |    
T  35919265 cgtgtccgacacgacacggacacttataattacactgaattatgtgattttttttcttcaaattattagatgtgtcggagtgttggtgtccgtgtgtcag 35919364  T
Q  120 tgtccg 125  Q
    ||||||    
T  35919365 tgtccg 35919370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 36878519 - 36878427
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccg 131  Q
    |||| |||||| | |||||||| || ||||||||| ||| ||||||||||||  ||||||| |||| ||||| |  |||||||||||| |||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgt-ctatgtccgtgtccgtatccg 36878427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 93
Target Start/End: Complemental strand, 2283717 - 2283669
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgt 93  Q
    |||||| ||||||||||| || |||||| ||||||||||||| ||||||    
T  2283717 acacttataattacattgaatcatgtgattttttcaaattataagttgt 2283669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 6427394 - 6427334
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||| ||||||||| ||| ||||||||||||  |||| || |||| ||||||||    
T  6427394 taattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccg 6427334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 9103672 - 9103624
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||| |||||||||||||||  |||||||| |||| ||||||||    
T  9103672 attatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccg 9103624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 16812575 - 16812527
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||| ||| ||||||||||| | |||||||||||| ||||||||    
T  16812575 attatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccg 16812527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 17778604 - 17778549
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||| ||||||||||||||||| |||||   |||| |||||||||||||||| ||||||    
T  17778604 gacaccgacacttgtaattacactgtat---gtgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 8e-22; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 30299043 - 30298930
Alignment:
Q  1 aagcacggacactcctcggattagacgtgt-ccgataggacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcgg 98  Q
    |||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||| || ||||||| |  |||||||||||||||| ||||||||    
T  30299043 aagcacggacactcctcggattagacgtgtcccggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcgg 30298944  T
Q  99 tgtgttagtgtccg 112  Q
     |||| ||||||||    
T  30298943 cgtgtcagtgtccg 30298930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 30327911 - 30327798
Alignment:
Q  1 aagcacggacactcctcggattagacgtgt-ccgataggacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcgg 98  Q
    |||||||||||||||||||||||||||||| |||  | |||| ||||||||||||||||| || ||||||| |  |||||||||||||||| ||||||||    
T  30327911 aagcacggacactcctcggattagacgtgtcccggcacgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcgg 30327812  T
Q  99 tgtgttagtgtccg 112  Q
     |||| ||||||||    
T  30327811 cgtgtcagtgtccg 30327798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 12895105 - 12895182
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||| | |||| |||||||||||||||| ||| ||||||||| |||||||||||||||| ||| |||| ||||    
T  12895105 cgtgtccgacacgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgt 12895182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 24613702 - 24613761
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    |||| ||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtcg 24613761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 11596360 - 11596438
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 123  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| | ||| || || | |||||| ||||||||||||    
T  11596360 acacttgtaattacactgaattatgtgattttttcaaattattagctttgttggcgtatcagtgtctggtgtccgtgtc 11596438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 12797339 - 12797412
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||||| || ||| |||| ||||||||    
T  12797339 gacaccgacacttgtaattacactgaattatgtga-tttttcaaattattagttttgccggcgtgtcagtgtccg 12797412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 23292987 - 23293061
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||| | || ||||||||| |||||||||||||||| |||||||| |||| | ||||||    
T  23292987 gacaccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccg 23293061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 24544035 - 24543957
Alignment:
Q  43 cgacacttgtaattacattgtattatgtg-actttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgt 120  Q
    ||||||||||||||||| || |||| ||| | ||||| ||||||||||||||||||| |||| |||||| |||||||||    
T  24544035 cgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtgtctggtgtccgt 24543957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 54580024 - 54580082
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||| |||||||| |||||||| || ||||||||| |||||||||||||||||||||||    
T  54580024 gacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtc 54580082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 19482719 - 19482654
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||||||||||||||  | |||||||||  |||||||||||||||||||||||| |||| ||||||    
T  19482719 acacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtc 19482654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 40481687 - 40481623
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||||| |||| |||| ||||||    
T  40481687 acacttgtaattacactgaattatgtga-tttttcaaattattagttgtatcggcgtgtcagtgtc 40481623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 26 - 98
Target Start/End: Original strand, 3947755 - 3947827
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    ||||||||| | ||||  |||||||||||||||| || |||||| || |||||||||||||||| ||||||||    
T  3947755 cgtgtccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcgg 3947827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 21945561 - 21945501
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||| ||||||||||||||||| || ||||||| | |||||||||||||||| ||||||||    
T  21945561 gacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcgg 21945501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 388
Target Start/End: Complemental strand, 51978683 - 51978594
Alignment:
Q  302 agttaagggtataatagaaaaag---aaatgatttcatcaaaagtaacgaaatttactagttttcttattatgtgtaaataatcttaaaa 388  Q
    |||||||||||| |||||||||    |||| ||  ||||||||||||| ||||||| ||||||||| | ||||||| |||||||||||||    
T  51978683 agttaagggtattatagaaaaatgacaaataataccatcaaaagtaacaaaatttattagttttctaagtatgtgtcaataatcttaaaa 51978594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 715615 - 715677
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttc-aaattattagttgtgtcggtgtgttag 106  Q
    ||||||||||||||| || ||||||||| |||||  |||||||||| ||||||||||||||||    
T  715615 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 715677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 752941 - 753003
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttc-aaattattagttgtgtcggtgtgttag 106  Q
    ||||||||||||||| || ||||||||| |||||  |||||||||| ||||||||||||||||    
T  752941 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 753003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 4157207 - 4157112
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt---tagtgtccggtgtccgtgtccgcatccg 131  Q
    |||| |||||||||||||| || |  ||||||||| ||||||||||||||||||||||| |||| |   | ||||| |||||||||||||| |||||    
T  4157207 gacaccgacacttgtaattgcactaaattatgtga-tttttcaaattattagttgtgtcagtgtctgtgtcgtgtctggtgtccgtgtccgtatccg 4157112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 14126118 - 14126184
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||| |||||||| || ||||||||||||| |||||||||||   ||||||| |||||||||||    
T  14126118 gacacttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtc 14126184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 43 - 89
Target Start/End: Complemental strand, 29205497 - 29205451
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    ||||||||||||||||| || ||||||||| ||||||||||||||||    
T  29205497 cgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 35157986 - 35158060
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||| |||||||| |  ||||||||| |||| |||||||||||||| ||||| |||| ||||||||    
T  35157986 gacaccgacacttataattacactaaattatgtgatttttccaaattattagttgcgtcggcgtgtcagtgtccg 35158060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 2361976 - 2362041
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| |||||||| |||||||| |  ||||||| | |||||||||||||||| |||||||||||||    
T  2361976 gacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgt 2362041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 50 - 95
Target Start/End: Original strand, 14465088 - 14465133
Alignment:
Q  50 tgtaattacattgtattatgtgactttttcaaattattagttgtgt 95  Q
    ||||||||||||| ||||||||| |||||||||||||||| |||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgt 14465133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 28964255 - 28964300
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||    
T  28964255 gacacttgtaattacactgaattatgtgattttttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 145
Target Start/End: Original strand, 32273553 - 32273633
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccgcatccgtgcttcat 145  Q
    ||||||| | |||||||||||||||||||||| || |||| | ||||||||||| ||||||  ||||| || ||||||||||    
T  32273553 attatgttattttttcaaattattagttgtgttggcgtgtca-tgtccggtgtctgtgtccatatccgtattcgtgcttcat 32273633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 4383419 - 4383352
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||| || ||||||||| |||||||||||||||||||| |||  |||| ||||||||    
T  4383419 gacatttgtaattacactgaattatgtga-tttttcaaattattagttgtatcgacgtgtcagtgtccg 4383352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 11110708 - 11110768
Alignment:
Q  63 tattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 123  Q
    ||||||||||  |||||||||||||  ||||||||| ||||  ||||||||||||||||||    
T  11110708 tattatgtgatattttcaaattattccttgtgtcggcgtgtctgtgtccggtgtccgtgtc 11110768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 16073452 - 16073373
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtcc 118  Q
    |||| ||||||||||||||||| || |||||| || ||||||||||||||| |||||| || |||| || |||| ||||||    
T  16073452 gacaccgacacttgtaattacactgaattatgcga-tttttcaaattattacttgtgttggcgtgtcagagtccagtgtcc 16073373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 112
Target Start/End: Complemental strand, 20633536 - 20633469
Alignment:
Q  42 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||||||||| |||||||   ||||||||||||||||  ||||||  |||| ||||||||    
T  20633536 acgacacttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtccg 20633469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 28084574 - 28084514
Alignment:
Q  44 gacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||||||||||||| |||||||||  ||||||||||| |||| |||||||| ||||    
T  28084574 gacacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgt 28084514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 31800484 - 31800544
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||||||||||||||||  ||||| | | ||||| |||||||||| |||||||||||||    
T  31800484 cgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgt 31800544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 34306805 - 34306864
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||| ||||||||||||||||| |  ||||| ||| |||||||||||||||||||||||||    
T  34306805 gacaccgacacttgtaattacactacattatctga-tttttcaaattattagttgtgtcgg 34306864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 38847019 - 38847078
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||||||||||||| || || || ||| |||||||||||||||| |||||||| ||||    
T  38847019 gacacttgtaattacactgaataatatgattttttcaaattattagctgtgtcggagtgt 38847078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 49431084 - 49431009
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||| |||||||| || ||||||||| ||||| ||||||||||| |||||||| |||| | ||||||    
T  49431084 gacaccgacacttttaattacactgaattatgtgatttttttcaaattattagctgtgtcggcgtgtcactgtccg 49431009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 34
Target Start/End: Original strand, 17210039 - 17210069
Alignment:
Q  4 cacggacactcctcggattagacgtgtccga 34  Q
    |||||||||||||||||||||||||||||||    
T  17210039 cacggacactcctcggattagacgtgtccga 17210069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 27706185 - 27706251
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    ||||||||||||||| |  ||||||||| ||||| ||||||||| ||||||||  |||| |||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtcc 27706251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 88
Target Start/End: Original strand, 6485617 - 6485662
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattatta 88  Q
    ||||||||||||||||| |  ||||||||| |||||||||||||||    
T  6485617 cgacacttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 12895275 - 12895340
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| |||||||| ||||||||    ||||||||| ||||||||||||||| ||||||||| ||||    
T  12895275 gacaccgacacttataattacacaaaattatgtgattttttcaaattattatttgtgtcggcgtgt 12895340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 3 - 32
Target Start/End: Complemental strand, 35239231 - 35239202
Alignment:
Q  3 gcacggacactcctcggattagacgtgtcc 32  Q
    ||||||||||||||||||||||||||||||    
T  35239231 gcacggacactcctcggattagacgtgtcc 35239202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 37203315 - 37203239
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtcc 124  Q
    ||||||||||||||| |  ||||||| | ||||||||||||||||  ||||| |||   | |||||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattagccgtgtctgtg---tcgtgtccggtgtccgtgtcc 37203239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 389
Target Start/End: Complemental strand, 3929630 - 3929573
Alignment:
Q  330 atttcatcaaaagtaacgaaatttactagttttcttattatgtgtaaataatcttaaaac 389  Q
    |||||||||||| |||| ||||||| | |||||||||  |||||||||||| ||||||||    
T  3929630 atttcatcaaaaataacaaaatttattggttttctta--atgtgtaaataaacttaaaac 3929573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 4383480 - 4383448
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccg 33  Q
    |||||||||||||||||||||||| ||||||||    
T  4383480 aagcacggacactcctcggattaggcgtgtccg 4383448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 12884352 - 12884380
Alignment:
Q  1 aagcacggacactcctcggattagacgtg 29  Q
    |||||||||||||||||||||||||||||    
T  12884352 aagcacggacactcctcggattagacgtg 12884380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 36635368 - 36635308
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||| || ||||||||| ||| ||||||||||||| |||| || |||| ||||||||    
T  36635368 taattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtgtccg 36635308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 101
Target Start/End: Complemental strand, 51701309 - 51701253
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    ||||||||||||||| |  ||||||| | |||||||||||||||| |||||| ||||    
T  51701309 acacttgtaattacactcaattatgtaattttttcaaattattagctgtgtccgtgt 51701253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 37 - 123
Target Start/End: Original strand, 17749 - 17835
Alignment:
Q  37 ggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 123  Q
    ||||| ||||||||||||||||| |  ||||||||| ||||||||||||||||||||||| | |||||| |||||| ||||||||||    
T  17749 ggacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgttattgtccgatgtccgtgtc 17835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 5e-20; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 21374706 - 21374807
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtcc-gtgtccgcatccgcatccgtgctt 142  Q
    |||||||||||||||| || ||||||| | |||||||||||||||| |||||||| |||||||||||| |||||| |||||||  |||| ||||||||||    
T  21374706 gacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtcc-gtgtccggtgtccgtgtccgtatccgtgctt 21374804  T
Q  143 cat 145  Q
    |||    
T  21374805 cat 21374807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19536366 - 19536473
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttt-tcaaattattagttgtgtcggt 99  Q
    ||||| |||||||||||||||||| |||||||||     || ||||||||||||||||| || ||||||||| |||| |||||||||||||||||||||     
T  19536366 aagcatggacactcctcggattaggcgtgtccga-----caccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggc 19536460  T
Q  100 gtgttagtgtccg 112  Q
    |||| | ||||||    
T  19536461 gtgtcattgtccg 19536473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 37559035 - 37558949
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||| |||||||||||||||||||| ||||||||| |||| ||||||||||| |||||||| |||| ||||||| |||||||| ||||    
T  37559035 gacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtatccg 37558949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 20539637 - 20539749
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtc-cgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggt 99  Q
    ||||||||||||||||||||| || |||||| ||  | |||| ||||||||||||||||| |  ||||| ||| |||||||||||||||| |||||||      
T  20539637 aagcacggacactcctcggatcaggcgtgtctcgccacgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgac 20539736  T
Q  100 gtgttagtgtccg 112  Q
    |||| ||||||||    
T  20539737 gtgtcagtgtccg 20539749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 15657922 - 15657848
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||| ||||||||||| || ||||||||| |||| |||||||||||||| ||||| |||||||||||||    
T  15657922 gacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtgtccg 15657848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 30717531 - 30717605
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| | ||||||| ||| ||||||||    
T  30717531 gacatcgacacttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccg 30717605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 15972931 - 15972857
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||| ||| | ||||||||||||||| ||||||||| |||| ||||||||    
T  15972931 gacaccgacacttgtaattacactgaattgtgtaattttttcaaattattaattgtgtcggcgtgtcagtgtccg 15972857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 16021964 - 16022034
Alignment:
Q  325 aaatgatttcatcaaaagtaacgaaatttactagttttcttattatgtgtaaataatcttaaaacgacaat 395  Q
    |||| ||| ||| ||||||||| ||||||| | ||||||| | ||||||||||||||||||||||||||||    
T  16021964 aaataattccataaaaagtaacaaaatttattggttttctcagtatgtgtaaataatcttaaaacgacaat 16022034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 18422021 - 18421947
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || |||||||||  |||| ||||||||| ||||||||| |||| ||||||||    
T  18422021 gacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtgtccg 18421947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 30335475 - 30335401
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||| ||||||||||| |  ||||||| | ||||||||||||||||||||||||| ||| |||||||||    
T  30335475 gacaccgacatttgtaattacactaaattatgtcattttttcaaattattagttgtgtcggcgtgctagtgtccg 30335401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 6940308 - 6940239
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||||| |  ||||||| ||||||| |||||||||| |||||||| |||| ||||||||    
T  6940308 cgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccg 6940239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 18841014 - 18841087
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    |||| ||||||||||||||||| |  ||||||| | ||||||||||||||||||||||| | |||| |||||||    
T  18841014 gacaccgacacttgtaattacacttaattatgtaattttttcaaattattagttgtgtcagcgtgtcagtgtcc 18841087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 23718079 - 23718010
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||| | |||||||| || ||||||||||||| ||||||||||||  |||||||||||| ||||||||    
T  23718079 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccg 23718010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Complemental strand, 24105751 - 24105682
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||| | |||||||| || ||||||||||||| ||||||||||||  |||||||||||| ||||||||    
T  24105751 cgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccg 24105682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 30404856 - 30404925
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||   ||||||| |||| ||||||||    
T  30404856 cgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccg 30404925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 20473380 - 20473320
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||| ||||||||||||||||| || ||||| ||| ||||| |||||||||||||||||||    
T  20473380 gacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcgg 20473320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Complemental strand, 974805 - 974746
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    |||| ||||||||||||||||| || || ||||||  |||||||||||||||||||||||    
T  974805 gacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtcg 974746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 37419793 - 37419714
Alignment:
Q  46 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||||||||||||| || ||| ||||| |||||||||||||| |   |||||| |||| |||||||||||||||| ||||    
T  37419793 cacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtgtccggtgtccgtatccg 37419714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 2438720 - 2438778
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||| ||||||||||||||||| || ||||||||| ||||| |||||||||| ||||||    
T  2438720 gacaccgacacttgtaattacactgaattatgtgattttttgaaattattagctgtgtc 2438778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 26769569 - 26769471
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt-----tagtgtccggtgtccgtgtccgcatccg 131  Q
    |||| |||||||||||||||||    || ||||||  |||||||||||||||||||||||| ||||     | |||||||||||||||||||| |||||    
T  26769569 gacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtctgtgtcgtgtccggtgtccgtgtccgtatccg 26769471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 12668424 - 12668489
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| |||||||| |||||||| || ||||||| | |||||||||||||||||| |||||| ||||    
T  12668424 gacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgt 12668489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 12940941 - 12940994
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    ||||| ||||||||||| || ||||| ||| |||||||||||||||||||||||    
T  12940941 cgacatttgtaattacactgaattatatgattttttcaaattattagttgtgtc 12940994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 38117167 - 38117232
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||||||||||||||  | | ||||||| |||||||||||||||| |||||||| |||| ||||||    
T  38117167 acacttgtaattacaccgaagtatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 38117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 36756345 - 36756417
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||| |||||||| |||||||| || ||||||| | || |||||||||||||||||||||  |||| ||||||    
T  36756345 gacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtc 36756417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 5040792 - 5040730
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtga--ctttttcaaattattagttgtgtcgg 98  Q
    |||| |||||||||||||||||||| |||||||||   |||||||||||||||| ||| ||||    
T  5040792 gacaccgacacttgtaattacattgaattatgtgattttttttcaaattattagctgtatcgg 5040730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 14117731 - 14117814
Alignment:
Q  271 agagataagtagatagaacaagataataaaaagttaagggtataatag-aaaaagaaatgatttcatcaaaagtaacgaaattt 353  Q
    |||||||| |||||  || ||||||||||| | ||||| |||| |||| ||||||| || ||||||||||||||||| ||||||    
T  14117731 agagataaatagatgaaataagataataaatacttaagagtattataggaaaaagacataatttcatcaaaagtaacaaaattt 14117814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 14996213 - 14996330
Alignment:
Q  27 gtgtccgataggacaacgacacttgtaattacattgtattatgtgactttt-tcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||||||| | |||| ||||||||||||||||| |  ||||| ||| |||| |||||||||||| ||||||||  ||| ||||||| |||| | |||| |    
T  14996213 gtgtccgacaagacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtcc-gtgt-catgtctg 14996310  T
Q  126 catccgcatccgtgcttcat 145  Q
    | |||| |||||||||||||    
T  14996311 cgtccgtatccgtgcttcat 14996330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 23058443 - 23058518
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || |||||||||  ||||||||||||||| |||||| || |||| | ||||||    
T  23058443 gacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtcactgtccg 23058518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 11223864 - 11223922
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    |||| ||||||||||||||||| || ||||||| | ||||||||| |||||| ||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtc 11223922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 29176501 - 29176566
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||||| |||||||| || |||||||||| ||||||||||||||  |||||| | |||| ||||||    
T  29176501 acacttataattacactgaattatgtgaccttttcaaattattaactgtgtctgcgtgtaagtgtc 29176566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 34691777 - 34691857
Alignment:
Q  4 cacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    ||||||||||||||||||||| |||||||||     || |||||| | |||||||| || ||||| ||| ||| ||||||||||||    
T  34691777 cacggacactcctcggattaggcgtgtccga-----caccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 89
Target Start/End: Original strand, 34714189 - 34714269
Alignment:
Q  4 cacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    ||||||||||||||||||||| |||||||||     || |||||| | |||||||| || ||||| ||| ||| ||||||||||||    
T  34714189 cacggacactcctcggattaggcgtgtccga-----caccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 21091775 - 21091707
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||||||||||| || | ||||| | ||| | ||||||||||  |||||||||||| ||||||||    
T  21091775 gacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtccg 21091707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 33599068 - 33599016
Alignment:
Q  212 tttatttgttgtttttaaattttaatgcaacattaactattattttgtcaata 264  Q
    ||||||| || |||| ||| |||||||||||||||||  ||||||||||||||    
T  33599068 tttatttattattttcaaagtttaatgcaacattaaccgttattttgtcaata 33599016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 22652034 - 22651960
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||| |||| ||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  22652034 gacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 22651960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 36450762 - 36450841
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    ||||||||||||||| || ||| ||||| ||||||||||||||||||||||||| |||| ||||||| |||||||| ||||    
T  36450762 acacttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtcc-gtgtccgtatccg 36450841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 46 - 117
Target Start/End: Original strand, 30271300 - 30271371
Alignment:
Q  46 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtc 117  Q
    |||||||||||||| || ||||||||| |||||||||| ||||| |||||||| |||| |||||||||||||    
T  30271300 cacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccggtgtc 30271371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 15816130 - 15816204
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||| |||||||| |  ||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  15816130 gacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 15816204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 107
Target Start/End: Original strand, 4298887 - 4298956
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagt 107  Q
    |||| |||||||||||||||||||  ||||||||| |||||||||||||||  |||||||| ||||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagt 4298956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 25566899 - 25566789
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt---tagtgtccggtgtccgtgtccgcatccgcat 134  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| |||||| |||| |   |  ||||||||||| |||||   ||||| ||    
T  25566899 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagtgtctgtgtcatgtccggtgtctgtgtctatatccgtat 25566800  T
Q  135 ccgtgcttcat 145  Q
    |||||||||||    
T  25566799 ccgtgcttcat 25566789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 29447111 - 29447170
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    |||| ||||||||||| |||||||| ||||||||| ||| ||||||||||||||||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtcg 29447170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 18170483 - 18170557
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||| |||||||||||||| ||||||| | ||||||||||| ||| ||||||||| |||| ||||||||    
T  18170483 gacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccg 18170557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 18634051 - 18634125
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||| |||||||||||||| ||||||| | ||||||||||| ||| ||||||||| |||| ||||||||    
T  18634051 gacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtgtccg 18634125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 22197749 - 22197815
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||| ||||| || |||||||||||    
T  22197749 gacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtc 22197815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 24613578 - 24613509
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtg 108  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| ||||||||||||| ||||    
T  24613578 gacaccgacacttgtaattacacttaattatgtga-tttttcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 4948710 - 4948657
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagtt 91  Q
    |||| ||||||||||||||||| || ||||||||| ||||||||||||||||||    
T  4948710 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 111
Target Start/End: Original strand, 13436965 - 13437038
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    |||| |||||||||| |||||  || ||||||||| |||||||||||||||| |||||||| |||| |||||||    
T  13436965 gacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcc 13437038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 25192353 - 25192422
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||| |||||| | || ||||||| |||||||||||||||||| |||||||| |||| ||||||||    
T  25192353 cgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccg 25192422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 29510310 - 29510379
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||| | || ||| ||||| |||||||||||||||| |||||||| |||| ||||||||    
T  29510310 cgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 29510379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 2572057 - 2572116
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| |||||||    
T  2572057 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcg 2572116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 8343030 - 8342967
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| | |||||||||    
T  8343030 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgt 8342967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 8343368 - 8343309
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||| | |||||||||||    
T  8343368 gacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgt 8343309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 5813650 - 5813576
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||| ||||| |  | |||||||||||||||||||||||| |||||||| ||||  |||||||    
T  5813650 gacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagctgtgtcggcgtgtccgtgtccg 5813576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 20873127 - 20873053
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||  | |||||| |||| ||||||||    
T  20873127 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccg 20873053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 21465463 - 21465391
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgt 120  Q
    |||||||||||||||| | ||||| ||| |||||||||||||||| |||||| |||   | |||||||||||||||    
T  21465463 acacttgtaattacatcgaattatatgattttttcaaattattagctgtgtccgtg---tcgtgtccggtgtccgt 21465391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 22596045 - 22595981
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    ||||||||||||||| || ||||||| | ||||| |||||||||| |||||||| |||| |||||    
T  22596045 acacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 41831945 - 41832001
Alignment:
Q  42 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||||||||||| ||||| || ||||||||| |||||||||||||||  ||||||||    
T  41831945 acgacacttgtagttacactgaattatgtgattttttcaaattattaactgtgtcgg 41832001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 18407772 - 18407717
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    ||||||||||||||||| || ||||||||| |||||  ||||||||| ||||||||    
T  18407772 cgacacttgtaattacactgaattatgtgatttttttgaattattagctgtgtcgg 18407717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 22652101 - 22652070
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtcc 32  Q
    ||||||||||||||||||||||||||||||||    
T  22652101 aagcacggacactcctcggattagacgtgtcc 22652070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 89
Target Start/End: Complemental strand, 28745556 - 28745505
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    |||| ||||| ||||| |||||||| ||||||||| ||||||||||||||||    
T  28745556 gacatcgacatttgtagttacattgaattatgtgaatttttcaaattattag 28745505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 31557054 - 31556985
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtg 108  Q
    |||| ||| ||||||||||||| || ||||||||| |||||||||||||||  |||||||| |||| ||||    
T  31557054 gacaccgaaacttgtaattacactgaattatgtga-tttttcaaattattaactgtgtcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 11803384 - 11803355
Alignment:
Q  1 aagcacggacactcctcggattagacgtgt 30  Q
    ||||||||||||||||||||||||||||||    
T  11803384 aagcacggacactcctcggattagacgtgt 11803355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 89
Target Start/End: Original strand, 30077394 - 30077439
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    |||||||||||||||| || |||||||||  |||||||||||||||    
T  30077394 gacacttgtaattacactgaattatgtgatgttttcaaattattag 30077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 339 - 387
Target Start/End: Original strand, 9706796 - 9706844
Alignment:
Q  339 aaagtaacgaaatttactagttttcttattatgtgtaaataatcttaaa 387  Q
    |||||||||||||||| | ||||||||  ||||||||||||| ||||||    
T  9706796 aaagtaacgaaatttattggttttcttggtatgtgtaaataaccttaaa 9706844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 17468516 - 17468568
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    |||||||||||||||  | ||||||||| |||| ||||||||| |||||||||    
T  17468516 acacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtcg 17468568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 24196628 - 24196672
Alignment:
Q  68 tgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||| ||||||||||||||||||||||||| ||||  |||||||    
T  24196628 tgtgattttttcaaattattagttgtgtcggcgtgtcggtgtccg 24196672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Original strand, 31236583 - 31236643
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||| | ||||||||||| ||||||||| ||| ||||||||||||  ||||||| ||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgt 31236643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34897175 - 34897092
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    |||||||||||||||||| |||| | ||||||||     || |||||| | |||||||| || ||||||||| ||| ||||||||||||    
T  34897175 aagcacggacactcctcgaattacatgtgtccga-----catcgacacatataattacactgaattatgtgattttctcaaattattag 34897092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 112
Target Start/End: Complemental strand, 36934714 - 36934654
Alignment:
Q  52 taattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||| || ||||||||| |||||| |||||||||  ||||||  |||||||||||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccg 36934654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 87
Target Start/End: Complemental strand, 40332244 - 40332200
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattatt 87  Q
    ||||||||||||||||| || ||||||||| ||| ||||||||||    
T  40332244 cgacacttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 44067570 - 44067502
Alignment:
Q  42 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||| |||||||| |||||||||| | ||| |||||||||||   ||||||| |||| ||||||    
T  44067570 acgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtc 44067502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 125
Target Start/End: Complemental strand, 34910382 - 34910289
Alignment:
Q  31 ccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||||| |||| |||| |||||||||||| || ||||||||| ||||||||||||||||||||||||| ||| | ||||| ||||||||| ||||    
T  34910382 ccgatacgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtg-tcgtgtctggtgtccgtatccg 34910289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 25948851 - 25948939
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattag 89  Q
    ||||||||||| |||| |||||| |||||||||| | |||| | |||||| |||||||| || ||||||||| ||||||||||||||||    
T  25948851 aagcacggacattccttggattacacgtgtccgacacgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 10955010 - 10954939
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    |||| |||||||||| |||||| || ||||||||| ||||||||||||||||||||||||| |||| |||||    
T  10955010 gacaccgacacttgtgattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgt 10954939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 10335287 - 10335361
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||| ||||| |  | ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  10335287 gacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccg 10335361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 55401133 - 55401059
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| |  ||||||||| ||||||||||||||||||||||||| || | ||||||||    
T  55401133 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtatcagtgtccg 55401059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 21256953 - 21257045
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    ||||||||||||||||||||||||  ||||||   | || | ||||||||||||||| | || ||||||||| |||||||||||||||| ||||||    
T  21256953 aagcacggacactcctcggattaggtgtgtcc---acgataccgacacttgtaattatactgaattatgtgattttttcaaattattagctgtgtc 21257045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 4987299 - 4987363
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgt 109  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| |||||    
T  4987299 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 14209165 - 14209106
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||||||||||||| || ||||||||| ||||| ||||||||||||||||||| ||||    
T  14209165 gacacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgt 14209106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 20503518 - 20503451
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||||||||||| || ||||||| | |||||||||||||| |||||||||| |||| ||||||    
T  20503518 cgacacttgtaattacactgaattatgtcattttttcaaattatttgttgtgtcggcgtgtcagtgtc 20503451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 8587022 - 8587096
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||| ||| |||||||| |||| ||||||||    
T  8587022 gacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccg 8587096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 25775567 - 25775481
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgact-ttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 123  Q
    |||| ||||||||||||||||| || ||||||||| | ||||||||||||||  ||||| || |||| ||||||| |||||||||||    
T  25775567 gacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtgtccagtgtccgtgtc 25775481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 28918059 - 28917985
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||||||||| |||||||||||||||| | |||||| |||| ||| ||||    
T  28918059 gacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccg 28917985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 145
Target Start/End: Complemental strand, 14216944 - 14216845
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccgcatccgtgcttc 143  Q
    |||||||||||||||| || ||||| |||  |||| ||||||||||||||||||  |||| ||||||| |||| |||||| |  ||||||||||||||||    
T  14216944 gacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtcc-gtgt-cgtgtctgtgtccgcatccgtgcttc 14216847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 145
Target Start/End: Complemental strand, 14223073 - 14222974
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatccgcatccgtgcttc 143  Q
    |||||||||||||||| || ||||| |||  |||| ||||||||||||||||||  |||| ||||||| |||| |||||| |  ||||||||||||||||    
T  14223073 gacacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtgtcc-gtgt-cgtgtctgtgtccgcatccgtgcttc 14222976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 21479176 - 21479079
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt-----tagtgtccggtgtccgtgtccgcatcc 130  Q
    |||| ||||||| ||||||||| || ||| ||||| |||||||||||||||| |||||||| ||||     | |||||||||||||||||||| ||||    
T  21479176 gacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtgtcgtgtccggtgtccgtgtccgtatcc 21479079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 26508163 - 26508110
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtc 96  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||| ||||||    
T  26508163 cgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtc 26508110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 28812573 - 28812508
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| |||||||||||| |||| || ||||||||| || |||||||||||||||||||||| ||||    
T  28812573 gacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgt 28812508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 145
Target Start/End: Complemental strand, 39756294 - 39756188
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccg-tgtccgcatccgcatcc 136  Q
    |||| ||||||||||||||| |||  ||||||||| ||||| ||||||||| || |||||| |||| ||||||  ||||||| |||||| ||||  ||||    
T  39756294 gacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtgtc--gtgtccgatgtccgtatccatatcc 39756197  T
Q  137 gtgcttcat 145  Q
    |||||||||    
T  39756196 gtgcttcat 39756188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 49651778 - 49651847
Alignment:
Q  29 gtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||||| | |||| ||||||||||||||||| || ||||||||| ||||||||||||||||  |||||||    
T  49651778 gtccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagccgtgtcgg 49651847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 7928536 - 7928445
Alignment:
Q  5 acggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    ||||||||||||| |||||| |||||||||     || |||||| | |||||||| || ||||||||| ||||||||||||||||  ||||||||||    
T  7928536 acggacactcctcagattaggcgtgtccga-----caccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcggtgt 7928445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 10318064 - 10318119
Alignment:
Q  67 atgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 123  Q
    ||||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||    
T  10318064 atgtgactttttcaaattattagctgtgtcggcgtgtcagtgtcc-gtgtccgtgtc 10318119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 48 - 145
Target Start/End: Complemental strand, 14747610 - 14747513
Alignment:
Q  48 cttgtaattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgttagtgtccggtgtcc-gtgtccgcatccgcatccgtgcttcat 145  Q
    |||||||||||| |  ||||||||| ||||| ||||||||||| |||||||| |||| ||||||  |||||| ||||||| ||||| |||||||||||||    
T  14747610 cttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc--gtgtccggtgtccgtatccgtatccgtgcttcat 14747513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 110
Target Start/End: Complemental strand, 14829747 - 14829676
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||| ||||||||||||||||  || ||||||||| |||||||||||||||| |||||||| |||| ||||||    
T  14829747 gacaccgacacttgtaattaccatgaattatgtga-tttttcaaattattagctgtgtcggcgtgtcagtgtc 14829676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 16000017 - 16000089
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||| ||||||||||| ||||| || ||||||| | ||||| ||||||||||||||||||| |||| ||||||    
T  16000017 gacaccgacacttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtc 16000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 21305290 - 21305218
Alignment:
Q  52 taattacattgtattatgtgacttttt-caaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtc 123  Q
    ||||||||||  ||||||||| ||||| |||||||||||  ||||||| ||||||||||| ||||||||||||    
T  21305290 taattacatttaattatgtgatttttttcaaattattagaggtgtcggcgtgttagtgtctggtgtccgtgtc 21305218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 35994743 - 35994798
Alignment:
Q  42 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||||||||||||||||| || ||||||||| |||||||||||||||| ||||||||    
T  35994743 acgacacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcgg 35994798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 1509597 - 1509534
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    |||| ||||||||||||||||| |  ||||||||| |||||||||||||||| |||||| ||||    
T  1509597 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcagtgt 1509534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 10268493 - 10268560
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||  |||||||| |||| |||||||    
T  10268493 gacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtcc 10268560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 14832151 - 14832092
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||||||||||||||||  |||||||| |||||||||||||||| ||| |||| ||||    
T  14832151 gacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgt 14832092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 38 - 101
Target Start/End: Original strand, 51206354 - 51206417
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgt 101  Q
    |||| ||||||||||| ||||| || ||||||||| |||||||||||||||| |||||| ||||    
T  51206354 gacaccgacacttgtatttacactgaattatgtgattttttcaaattattagctgtgtcagtgt 51206417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 121
Target Start/End: Original strand, 8412972 - 8413029
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtg 121  Q
    ||||||||  ||| |||||||||||||||||||||| ||| | |||||||||||||||    
T  8412972 attatgtgtttttctcaaattattagttgtgtcggtctgtcaatgtccggtgtccgtg 8413029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 32400715 - 32400798
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccgcatcc 130  Q
    ||||||||||||||||    ||||||| |  ||||||||||||||| |||||||  |||| |||||||||||| |||||||| ||||    
T  32400715 gacacttgtaattacaa---attatgtaatcttttcaaattattagctgtgtcgccgtgtcagtgtccggtgttcgtgtccgtatcc 32400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 41961651 - 41961723
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||| |||||||||||||||||  | || ||||||  |||||||||||||||||||| ||| |||| ||||||    
T  41961651 gacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtgtc 41961723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 97
Target Start/End: Original strand, 750619 - 750678
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    |||| |||||||||||||| ||  | |||||||||  |||||||||||||||||||||||    
T  750619 gacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcg 750678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 34910431 - 34910400
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtcc 32  Q
    ||||||||||||||||||||||||||||||||    
T  34910431 aagcacggacactcctcggattagacgtgtcc 34910400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 15796295 - 15796369
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||| ||||||||||| || ||||| ||| |||||||||||||||  |||||||| |||| | ||||||    
T  15796295 gacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtcattgtccg 15796369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 24205046 - 24205116
Alignment:
Q  42 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||| |||||||| |||||||||| | ||| |||||||||||   ||||||| |||| ||||||||    
T  24205046 acgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccg 24205116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 26492206 - 26492280
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||| ||||||||||||| || ||| | ||| |||||||||||||||| | |||||| |||| ||||||||    
T  26492206 gacaccgatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccg 26492280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 40052364 - 40052318
Alignment:
Q  64 attatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||| |||||||||||||||| |||||||| |||| ||||||    
T  40052364 attatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 40052318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 98
Target Start/End: Complemental strand, 14979224 - 14979179
Alignment:
Q  53 aattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    ||||||| || ||||||||| |||||||||||||||| ||||||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcgg 14979179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Original strand, 34185124 - 34185189
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| ||||||||||||||||| || ||| ||||| ||||| ||||||||||  ||||||| ||||    
T  34185124 gacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgt 34185189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 3164033 - 3164085
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcg 97  Q
    ||||||||  ||||| || ||||||||| |||||||||||||||| |||||||    
T  3164033 acacttgttcttacactgaattatgtgattttttcaaattattagctgtgtcg 3164085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 111
Target Start/End: Original strand, 17005625 - 17005693
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtcc 111  Q
    |||||||| |||||||| || ||||| ||| ||| ||||||||||||| |||| |||| || |||||||    
T  17005625 cgacacttataattacactgaattatatgattttatcaaattattagtggtgttggtgagtcagtgtcc 17005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Complemental strand, 27505304 - 27505244
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||| ||||||||||||||||| |  ||||||||| ||||  |||||||||| ||||||||    
T  27505304 gacaccgacacttgtaattacacttaattatgtgatttttaaaaattattagctgtgtcgg 27505244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 103
Target Start/End: Complemental strand, 29508497 - 29508437
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||| | |||||||| || ||||| ||| ||||||||||||||||| || |||||||||    
T  29508497 cgacacatataattacactgaattatatgattttttcaaattattagtggtatcggtgtgt 29508437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 46771 - 46628
Alignment:
Q  1 aagcacggacactcctcggattagacgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtg 100  Q
    |||||||||||||||||||||||| ||||||      |||| ||||| ||||||||||| || ||||||||| |||||||||||||||  |||||||| |    
T  46771 aagcacggacactcctcggattaggcgtgtc------gacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcg 46678  T
Q  101 tgttagtgtccg----gtgtccg-tgtccgcatccgcatccgtgcttcat 145  Q
    ||| | ||||||    ||||||| ||||||  |||| |||||||||||||    
T  46677 tgtcattgtccgtgtcgtgtccgatgtccgtgtccgtatccgtgcttcat 46628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 51862 - 51795
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  51862 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 51795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 103
Target Start/End: Complemental strand, 14580 - 14523
Alignment:
Q  46 cacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||    
T  14580 cacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgt 14523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 178825 - 178894
Alignment:
Q  44 gacacttgtaattacattgtattatg-tgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||||||||||| || |||||| ||| ||||||||||||||||||||||||| |||| ||||||||    
T  178825 gacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccg 178894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 20224 - 20156
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||||||||||| || ||||||||| |||||||||||||||| |||||||| |||| | ||||||    
T  20224 gacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccg 20156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 13458 - 13384
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||| ||||||||| || || ||||||||| ||| ||||||||||||||||||||| |||| ||||||||    
T  13458 gacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccg 13384  T

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Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 21869 - 21943
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||| ||||||||| || || ||||||||| ||| ||||||||||||||||||||| |||| ||||||||    
T  21869 gacaccgacccttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccg 21943  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 112
Target Start/End: Original strand, 225273 - 225343
Alignment:
Q  42 acgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||| ||||||||||||||||||| | ||| |||||||||||  |||||||| |||| ||||||||    
T  225273 acgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccg 225343  T

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Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 19626 - 19562
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    ||||||||||||||| || ||||||||| |||||||||||||||||||| |||| |||| ||||||    
T  19626 acacttgtaattacactgaattatgtga-tttttcaaattattagttgtatcggcgtgtcagtgtc 19562  T

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Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 8067 - 8003
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||| |||||||| |||||||| |||||||| ||| ||||||||||||||||||||||||| ||||    
T  8067 gacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgt 8003  T

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Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 23828 - 23740
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtga-ctttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    |||| ||||||||||||||||| || |||||||||  |||||||||||||||  |||| | |||||| |||||||||||| ||| ||||    
T  23828 gacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtgtccggtgttcgtatccg 23740  T

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Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 45 - 106
Target Start/End: Original strand, 4891 - 4953
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttc-aaattattagttgtgtcggtgtgttag 106  Q
    ||||||||||||||| || ||||||||| |||||  |||||||||| ||||||||||||||||    
T  4891 acacttgtaattacactgaattatgtgattttttttaaattattagctgtgtcggtgtgttag 4953  T

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Target: scaffold0652 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 112
Target Start/End: Original strand, 463 - 537
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| || ||| ||||| ||||||||||||||||  ||||||| || | ||||||||    
T  463 gacaccgacacttgtaattacactgaattttgtgattttttcaaattattagcagtgtcggcgtatcagtgtccg 537  T

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Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 8856 - 8782
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| ||||||||||||||||| |  || || ||| |||||||||||||||| |||||||| |||| ||||||||    
T  8856 gacaccgacacttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccg 8782  T

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Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 10509 - 10546
Alignment:
Q  75 ttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  10509 ttttcaaattattagctgtgtcggtgtgttagtgtccg 10546  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 92859 - 92791
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||||||||||||||| || ||||||| | ||| ||||||||||||  ||||||| |||| ||||||||    
T  92859 gacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccg 92791  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 145
Target Start/End: Complemental strand, 23490 - 23373
Alignment:
Q  26 cgtgtccgataggacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccggtgtccgtgtccg 125  Q
    ||||||||| | |||| |||||||| |||||||| || ||||||||| |||||  | ||||||  |||||||| |||| |||||| | |||| |||||||    
T  23490 cgtgtccgacacgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtgtctg-tgtc-gtgtccg 23393  T
Q  126 catccgcatccgtgcttcat 145  Q
      |||| |||||||||||||    
T  23392 tgtccgtatccgtgcttcat 23373  T

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Target: scaffold0021 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 98
Target Start/End: Complemental strand, 130535 - 130480
Alignment:
Q  43 cgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    ||||||||||||||||| || ||||||||| ||||||||| |||||  ||||||||    
T  130535 cgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcgg 130480  T

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Target: scaffold0227 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 7319 - 7377
Alignment:
Q  45 acacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    |||||| |||||||| |  ||||||||| |||| |||||||||||||||||||| ||||    
T  7319 acacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgt 7377  T

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Target: scaffold0066 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 33375 - 33429
Alignment:
Q  49 ttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgt 103  Q
    ||||||||||| || ||||||| | |||||||||||||||| |||||||| ||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgt 33429  T

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Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 112
Target Start/End: Complemental strand, 241652 - 241578
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtccg 112  Q
    |||| |||||||  |||||||| |  ||||||||| |||| ||||||||||| |||||||| |||| ||||||||    
T  241652 gacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccg 241578  T

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Target: scaffold0187 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 4620 - 4567
Alignment:
Q  210 tatttatttgttgtttttaaattttaatgcaacattaactattattttgtcaat 263  Q
    |||||| |||||||||||||| ||| ||| ||||||||||||||| ||| ||||    
T  4620 tatttaattgttgtttttaaagttttatgtaacattaactattatcttgacaat 4567  T

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Target: scaffold0450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 98
Target Start/End: Original strand, 8636 - 8696
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcgg 98  Q
    |||| ||||| ||||||||| |  | |||||||||  ||||||||||||||||||||||||    
T  8636 gacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcgg 8696  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 3856 - 3900
Alignment:
Q  44 gacacttgtaattacattgtattatgtgactttttcaaattatta 88  Q
    |||||||||||||||| || ||||||||| ||||| |||||||||    
T  3856 gacacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

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Target: scaffold0062 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 332 - 372
Alignment:
Q  224 ttttaaattttaatgcaacattaactattattttgtcaata 264  Q
    |||||||||||||||||||||||| |||| | |||||||||    
T  332 ttttaaattttaatgcaacattaattattgtcttgtcaata 372  T

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Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 110
Target Start/End: Original strand, 135313 - 135385
Alignment:
Q  38 gacaacgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggtgtgttagtgtc 110  Q
    |||| |||||| | ||||||||  | ||||||||| ||| ||||||||||||  ||||||||||||| |||||    
T  135313 gacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtc 135385  T

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