View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10039_low_49 (Length: 231)
Name: NF10039_low_49
Description: NF10039
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10039_low_49 |
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Alignment Details
Target: chr2 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 22 - 217
Target Start/End: Original strand, 45459928 - 45460123
Alignment:
| Q |
22 |
cagctccagtagacgtaccagatgaagctccagctccagggccggcaatatcacctgtggaagctccagcaccagtattatctcctacaaatccagatga |
121 |
Q |
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| T |
45459928 |
cagctccagtagccgtaccagttgaagctccagctccagggccggcaatatcacctgtggaaactccagcaccagtattatctcctacaaatccagatga |
45460027 |
T |
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| Q |
122 |
agctgcagatggtcccaattcaggggtgataaagtctgatgtgaacaatgccttagctctcttccttactttttcctcaatctatgtgcttcttct |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45460028 |
agctgcagatggtcccaattcaggggtgataaagtctgatgtgaacaatgccttagctctcttccttactttttcctcaatctatgtgcttcttct |
45460123 |
T |
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