View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10040_low_10 (Length: 253)

Name: NF10040_low_10
Description: NF10040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10040_low_10
NF10040_low_10
[»] chr7 (49 HSPs)
chr7 (1-88)||(23455239-23455326)
chr7 (1-70)||(35455802-35455871)
chr7 (1-77)||(14603254-14603330)
chr7 (3-78)||(6498759-6498834)
chr7 (1-68)||(39342634-39342701)
chr7 (1-67)||(9784923-9784989)
chr7 (1-71)||(28539160-28539230)
chr7 (1-70)||(23548603-23548672)
chr7 (3-70)||(26162131-26162198)
chr7 (1-64)||(30629061-30629124)
chr7 (3-77)||(5644668-5644742)
chr7 (3-68)||(29065819-29065884)
chr7 (3-68)||(31632722-31632787)
chr7 (4-68)||(40110737-40110801)
chr7 (4-68)||(43955517-43955581)
chr7 (1-68)||(30524255-30524322)
chr7 (3-72)||(34398942-34399012)
chr7 (4-66)||(43955609-43955671)
chr7 (3-68)||(2057395-2057460)
chr7 (3-68)||(35776949-35777014)
chr7 (11-70)||(29065921-29065980)
chr7 (5-71)||(2057491-2057557)
chr7 (3-73)||(40110832-40110902)
chr7 (4-69)||(18789241-18789306)
chr7 (3-68)||(25189220-25189285)
chr7 (3-72)||(34388359-34388428)
chr7 (11-70)||(5644779-5644838)
chr7 (66-163)||(10624935-10625033)
chr7 (33-75)||(40853980-40854022)
chr7 (67-163)||(25119972-25120069)
chr7 (67-163)||(28514628-28514725)
chr7 (33-71)||(32650588-32650626)
chr7 (23-68)||(29195709-29195754)
chr7 (99-163)||(37869749-37869814)
chr7 (67-160)||(31191363-31191456)
chr7 (3-62)||(21635979-21636038)
chr7 (33-68)||(31913236-31913271)
chr7 (3-77)||(40854063-40854138)
chr7 (3-42)||(43791116-43791155)
chr7 (65-163)||(48488449-48488548)
chr7 (33-71)||(13815000-13815038)
chr7 (33-67)||(30587909-30587943)
chr7 (100-160)||(1111732-1111793)
chr7 (3-64)||(15990895-15990956)
chr7 (68-160)||(28646648-28646741)
chr7 (37-70)||(31913309-31913342)
chr7 (3-68)||(44915195-44915260)
chr7 (41-77)||(26415962-26415998)
chr7 (23-71)||(46482059-46482107)
[»] chr8 (47 HSPs)
chr8 (1-71)||(29257367-29257437)
chr8 (1-70)||(44346694-44346763)
chr8 (3-86)||(40046786-40046869)
chr8 (3-68)||(36103101-36103166)
chr8 (2-70)||(33902665-33902733)
chr8 (3-70)||(515550-515617)
chr8 (1-68)||(33377313-33377380)
chr8 (3-70)||(44889352-44889419)
chr8 (4-74)||(17110964-17111034)
chr8 (1-66)||(29482823-29482888)
chr8 (7-71)||(28324684-28324748)
chr8 (1-68)||(14239-14305)
chr8 (3-71)||(3853613-3853681)
chr8 (3-71)||(3858071-3858139)
chr8 (1-68)||(1088293-1088360)
chr8 (3-68)||(17110869-17110934)
chr8 (3-68)||(42711374-42711439)
chr8 (7-70)||(24044958-24045021)
chr8 (5-71)||(14800056-14800122)
chr8 (3-65)||(35979022-35979084)
chr8 (3-68)||(23011734-23011799)
chr8 (33-77)||(7202934-7202978)
chr8 (4-66)||(4156262-4156324)
chr8 (4-62)||(8689138-8689196)
chr8 (11-68)||(14991692-14991749)
chr8 (15-68)||(27322679-27322732)
chr8 (33-74)||(29611382-29611423)
chr8 (3-68)||(33986004-33986069)
chr8 (10-74)||(33902768-33902831)
chr8 (3-50)||(8049272-8049319)
chr8 (3-50)||(13404921-13404968)
chr8 (33-68)||(30444963-30444998)
chr8 (33-68)||(42739949-42739984)
chr8 (14-64)||(30435250-30435300)
chr8 (33-71)||(34008796-34008834)
chr8 (99-163)||(7642621-7642686)
chr8 (33-70)||(8409947-8409984)
chr8 (14-70)||(37268112-37268168)
chr8 (33-68)||(7202865-7202900)
chr8 (11-66)||(13404829-13404884)
chr8 (33-68)||(14799979-14800014)
chr8 (67-133)||(13177816-13177882)
chr8 (99-137)||(24999446-24999484)
chr8 (11-68)||(31807409-31807465)
chr8 (23-68)||(32626072-32626117)
chr8 (99-163)||(38573313-38573378)
chr8 (33-69)||(30435350-30435386)
[»] chr2 (53 HSPs)
chr2 (1-71)||(1583815-1583885)
chr2 (1-74)||(35047685-35047758)
chr2 (1-68)||(769036-769103)
chr2 (1-68)||(11141305-11141372)
chr2 (1-68)||(33189263-33189330)
chr2 (2-71)||(14365792-14365861)
chr2 (1-68)||(3092282-3092349)
chr2 (3-71)||(11716405-11716473)
chr2 (3-68)||(14365700-14365765)
chr2 (3-71)||(13017776-13017844)
chr2 (8-68)||(39630225-39630285)
chr2 (11-71)||(41461617-41461677)
chr2 (3-68)||(10480119-10480184)
chr2 (3-68)||(14537199-14537264)
chr2 (3-68)||(27033490-27033555)
chr2 (3-66)||(11532261-11532324)
chr2 (3-66)||(11793897-11793960)
chr2 (4-70)||(784888-784954)
chr2 (3-65)||(28740599-28740661)
chr2 (11-64)||(11684603-11684656)
chr2 (11-68)||(17180297-17180354)
chr2 (67-163)||(36903952-36904049)
chr2 (4-68)||(14954266-14954330)
chr2 (99-160)||(9047633-9047695)
chr2 (3-68)||(784793-784858)
chr2 (1-38)||(7309769-7309806)
chr2 (11-60)||(11716501-11716550)
chr2 (3-68)||(17905654-17905719)
chr2 (7-60)||(30698289-30698342)
chr2 (33-73)||(14537305-14537345)
chr2 (68-159)||(38402528-38402620)
chr2 (4-76)||(45094480-45094552)
chr2 (5-72)||(10244173-10244240)
chr2 (33-68)||(11684696-11684731)
chr2 (7-77)||(7228024-7228094)
chr2 (33-74)||(11824786-11824827)
chr2 (3-71)||(8735841-8735909)
chr2 (33-72)||(8736461-8736500)
chr2 (8-66)||(2274801-2274859)
chr2 (33-71)||(2924775-2924813)
chr2 (33-75)||(20935718-20935759)
chr2 (33-71)||(21504465-21504503)
chr2 (3-41)||(32839656-32839694)
chr2 (67-137)||(39791522-39791592)
chr2 (13-83)||(44256211-44256280)
chr2 (99-163)||(223921-223986)
chr2 (67-128)||(2854426-2854487)
chr2 (33-66)||(3345765-3345798)
chr2 (33-62)||(11824704-11824733)
chr2 (69-137)||(15335826-15335894)
chr2 (33-73)||(19231305-19231345)
chr2 (99-159)||(41283360-41283420)
chr2 (14-66)||(41461517-41461569)
[»] scaffold0301 (1 HSPs)
scaffold0301 (2-66)||(7153-7217)
[»] chr6 (21 HSPs)
chr6 (3-74)||(34244988-34245059)
chr6 (3-74)||(29889442-29889513)
chr6 (3-68)||(28918165-28918230)
chr6 (3-72)||(9285643-9285712)
chr6 (9-71)||(1368474-1368536)
chr6 (4-76)||(8574687-8574759)
chr6 (3-66)||(6919710-6919773)
chr6 (3-70)||(13487273-13487340)
chr6 (4-71)||(776077-776144)
chr6 (11-74)||(6919809-6919872)
chr6 (11-68)||(9763114-9763171)
chr6 (4-68)||(8574760-8574824)
chr6 (3-71)||(9763009-9763077)
chr6 (3-70)||(15299519-15299585)
chr6 (1-64)||(15832470-15832533)
chr6 (30-70)||(33733430-33733470)
chr6 (4-68)||(776175-776239)
chr6 (3-55)||(15299412-15299464)
chr6 (4-70)||(10737728-10737794)
chr6 (35-68)||(1195351-1195384)
chr6 (99-163)||(6100694-6100759)
[»] chr5 (57 HSPs)
chr5 (1-68)||(41762218-41762285)
chr5 (1-68)||(927302-927369)
chr5 (3-74)||(37722899-37722970)
chr5 (3-74)||(15804316-15804387)
chr5 (3-66)||(19533912-19533975)
chr5 (4-70)||(22766950-22767016)
chr5 (7-72)||(22303879-22303944)
chr5 (3-71)||(9764432-9764500)
chr5 (3-71)||(15373957-15374025)
chr5 (3-66)||(2721565-2721628)
chr5 (6-68)||(15374057-15374119)
chr5 (4-70)||(26281275-26281341)
chr5 (3-68)||(25935295-25935360)
chr5 (3-68)||(40090419-40090484)
chr5 (11-68)||(40643919-40643976)
chr5 (4-68)||(2316378-2316442)
chr5 (2-66)||(20320652-20320716)
chr5 (4-67)||(3563278-3563341)
chr5 (4-67)||(20523228-20523291)
chr5 (3-64)||(9894327-9894388)
chr5 (13-66)||(28828369-28828422)
chr5 (7-68)||(32250107-32250167)
chr5 (3-75)||(2316473-2316544)
chr5 (4-68)||(9764338-9764402)
chr5 (23-74)||(5658770-5658821)
chr5 (3-66)||(14834826-14834889)
chr5 (3-70)||(20523131-20523198)
chr5 (11-74)||(34982210-34982272)
chr5 (3-70)||(35379342-35379408)
chr5 (3-66)||(37145506-37145569)
chr5 (33-71)||(34982313-34982351)
chr5 (3-73)||(40809336-40809406)
chr5 (3-68)||(10314649-10314714)
chr5 (11-68)||(32470882-32470939)
chr5 (14-66)||(15804399-15804451)
chr5 (4-68)||(23092057-23092121)
chr5 (13-77)||(13243448-13243514)
chr5 (33-68)||(15270871-15270906)
chr5 (4-71)||(23091960-23092026)
chr5 (67-157)||(32292254-32292345)
chr5 (4-67)||(33245378-33245441)
chr5 (11-73)||(16515000-16515061)
chr5 (3-77)||(32390066-32390140)
chr5 (33-71)||(33146058-33146096)
chr5 (33-71)||(33146188-33146226)
chr5 (33-74)||(2550322-2550363)
chr5 (11-68)||(6634015-6634072)
chr5 (11-68)||(16515120-16515177)
chr5 (33-74)||(22302533-22302574)
chr5 (11-71)||(28828449-28828509)
chr5 (6-66)||(32389974-32390034)
chr5 (38-70)||(34105087-34105119)
chr5 (12-72)||(40809444-40809504)
chr5 (33-68)||(22305112-22305147)
chr5 (33-72)||(40643832-40643871)
chr5 (3-72)||(32470976-32471043)
chr5 (3-71)||(6634108-6634176)
[»] chr3 (48 HSPs)
chr3 (1-71)||(36397994-36398064)
chr3 (1-68)||(34088571-34088638)
chr3 (1-72)||(48947601-48947672)
chr3 (3-74)||(44692916-44692987)
chr3 (3-70)||(46672810-46672877)
chr3 (1-68)||(53129848-53129915)
chr3 (1-71)||(53470434-53470504)
chr3 (7-72)||(47767428-47767493)
chr3 (1-68)||(671624-671691)
chr3 (3-68)||(9129438-9129503)
chr3 (3-68)||(9137545-9137610)
chr3 (3-64)||(21307539-21307600)
chr3 (3-68)||(27251988-27252053)
chr3 (11-72)||(44692818-44692879)
chr3 (11-68)||(49457343-49457400)
chr3 (7-71)||(37054391-37054455)
chr3 (7-73)||(42005964-42006030)
chr3 (3-60)||(19475824-19475881)
chr3 (11-68)||(44436258-44436315)
chr3 (67-163)||(45249390-45249487)
chr3 (4-68)||(5415783-5415847)
chr3 (3-71)||(28092211-28092279)
chr3 (3-71)||(39110391-39110459)
chr3 (4-71)||(44288467-44288534)
chr3 (3-60)||(31070415-31070471)
chr3 (4-68)||(5415878-5415942)
chr3 (3-70)||(31189404-31189471)
chr3 (11-74)||(46429498-46429561)
chr3 (33-68)||(54761583-54761618)
chr3 (5-71)||(30767101-30767167)
chr3 (14-64)||(35279920-35279970)
chr3 (33-71)||(46429411-46429449)
chr3 (7-68)||(7302346-7302407)
chr3 (11-72)||(47284328-47284389)
chr3 (33-77)||(332081-332125)
chr3 (4-68)||(9129344-9129408)
chr3 (4-68)||(9137451-9137515)
chr3 (12-68)||(46001364-46001420)
chr3 (7-50)||(30766571-30766614)
chr3 (33-71)||(25655312-25655350)
chr3 (33-75)||(27251905-27251947)
chr3 (33-67)||(38506895-38506929)
chr3 (4-70)||(46635855-46635921)
chr3 (3-65)||(52527039-52527101)
chr3 (33-70)||(331991-332027)
chr3 (33-66)||(27485474-27485507)
chr3 (33-73)||(47284222-47284262)
chr3 (33-69)||(47714286-47714322)
[»] chr4 (56 HSPs)
chr4 (1-71)||(2125854-2125924)
chr4 (1-71)||(35470119-35470189)
chr4 (4-71)||(14982277-14982344)
chr4 (3-70)||(31473847-31473914)
chr4 (3-60)||(1539649-1539706)
chr4 (3-72)||(15660277-15660346)
chr4 (3-71)||(857333-857401)
chr4 (3-74)||(10128068-10128139)
chr4 (11-70)||(49111414-49111473)
chr4 (3-65)||(10633035-10633097)
chr4 (4-70)||(36455905-36455971)
chr4 (3-68)||(7352906-7352971)
chr4 (67-163)||(31861581-31861678)
chr4 (11-67)||(4441338-4441394)
chr4 (4-68)||(36456021-36456085)
chr4 (3-74)||(5715738-5715809)
chr4 (3-70)||(16516169-16516236)
chr4 (4-63)||(28845876-28845935)
chr4 (3-70)||(28845965-28846032)
chr4 (11-73)||(4896643-4896705)
chr4 (3-68)||(1112605-1112670)
chr4 (11-72)||(7352808-7352869)
chr4 (11-72)||(11348339-11348400)
chr4 (23-68)||(31742878-31742923)
chr4 (11-68)||(41498592-41498649)
chr4 (3-71)||(11040965-11041032)
chr4 (6-77)||(1107149-1107220)
chr4 (97-163)||(2168473-2168540)
chr4 (3-66)||(4896726-4896789)
chr4 (65-163)||(25231536-25231635)
chr4 (4-70)||(55266870-55266936)
chr4 (109-163)||(37624859-37624914)
chr4 (23-66)||(42542981-42543024)
chr4 (67-160)||(41621902-41621996)
chr4 (3-72)||(1112716-1112785)
chr4 (99-163)||(3121080-3121145)
chr4 (99-163)||(9093611-9093676)
chr4 (11-68)||(15660183-15660240)
chr4 (33-70)||(26251015-26251052)
chr4 (67-159)||(26876113-26876206)
chr4 (99-163)||(35808712-35808777)
chr4 (99-159)||(41735448-41735509)
chr4 (3-68)||(42844543-42844608)
chr4 (33-73)||(42775618-42775658)
chr4 (4-68)||(42776637-42776701)
chr4 (23-70)||(467916-467962)
chr4 (33-68)||(21012596-21012631)
chr4 (11-66)||(31742778-31742833)
chr4 (4-62)||(9451141-9451199)
chr4 (3-41)||(29091164-29091202)
chr4 (33-71)||(53760810-53760848)
chr4 (33-70)||(56339149-56339186)
chr4 (37-73)||(32724925-32724961)
chr4 (4-68)||(41139475-41139537)
chr4 (11-71)||(42844645-42844705)
chr4 (33-69)||(47108317-47108353)
[»] chr1 (59 HSPs)
chr1 (165-248)||(23460038-23460123)
chr1 (3-68)||(26501087-26501152)
chr1 (3-72)||(15034753-15034822)
chr1 (4-68)||(15034659-15034723)
chr1 (3-71)||(24273228-24273296)
chr1 (4-76)||(47165221-47165293)
chr1 (3-73)||(34756422-34756492)
chr1 (3-76)||(8224760-8224833)
chr1 (3-68)||(23536067-23536132)
chr1 (3-68)||(32287941-32288006)
chr1 (3-70)||(6470694-6470761)
chr1 (2-71)||(946373-946441)
chr1 (3-68)||(4038075-4038140)
chr1 (11-72)||(30190238-30190299)
chr1 (4-65)||(51847855-51847916)
chr1 (1-69)||(32647300-32647368)
chr1 (4-71)||(4038170-4038237)
chr1 (107-165)||(23459474-23459533)
chr1 (11-74)||(50005181-50005244)
chr1 (3-73)||(27935579-27935649)
chr1 (11-72)||(45565390-45565451)
chr1 (1-41)||(15467969-15468009)
chr1 (4-68)||(27804360-27804424)
chr1 (11-71)||(44410308-44410368)
chr1 (66-137)||(51049809-51049880)
chr1 (3-74)||(43622986-43623057)
chr1 (3-65)||(37036957-37037019)
chr1 (11-64)||(27804269-27804322)
chr1 (99-158)||(1795858-1795918)
chr1 (13-69)||(32652205-32652261)
chr1 (11-71)||(40264132-40264192)
chr1 (33-72)||(32572936-32572975)
chr1 (11-73)||(29446745-29446807)
chr1 (99-160)||(36563873-36563935)
chr1 (4-38)||(47820243-47820277)
chr1 (99-163)||(3831412-3831477)
chr1 (3-68)||(38277415-38277480)
chr1 (11-72)||(38277517-38277577)
chr1 (67-136)||(42410254-42410323)
chr1 (3-68)||(49659217-49659281)
chr1 (99-158)||(894801-894861)
chr1 (6-50)||(946931-946975)
chr1 (11-67)||(32573024-32573080)
chr1 (3-59)||(37448409-37448465)
chr1 (7-59)||(44570687-44570739)
chr1 (33-73)||(45565500-45565540)
chr1 (33-81)||(48953574-48953622)
chr1 (33-68)||(5474417-5474452)
chr1 (33-68)||(15245460-15245495)
chr1 (11-66)||(28632601-28632656)
chr1 (11-66)||(28745799-28745854)
chr1 (33-72)||(37214924-37214963)
chr1 (33-71)||(23536173-23536211)
chr1 (3-68)||(31166310-31166375)
chr1 (33-70)||(32128046-32128083)
chr1 (11-68)||(44410413-44410470)
chr1 (11-68)||(50005079-50005136)
chr1 (99-139)||(36384915-36384955)
chr1 (33-73)||(41823180-41823220)
[»] scaffold0009 (2 HSPs)
scaffold0009 (3-70)||(41995-42062)
scaffold0009 (10-68)||(42079-42137)
[»] scaffold1562 (2 HSPs)
scaffold1562 (3-73)||(499-569)
scaffold1562 (5-68)||(405-468)
[»] scaffold1158 (2 HSPs)
scaffold1158 (3-73)||(2024-2094)
scaffold1158 (5-68)||(2125-2188)
[»] scaffold0169 (1 HSPs)
scaffold0169 (3-68)||(4075-4140)
[»] scaffold0027 (1 HSPs)
scaffold0027 (3-67)||(10887-10951)
[»] scaffold0048 (1 HSPs)
scaffold0048 (4-66)||(82945-83007)
[»] scaffold0400 (1 HSPs)
scaffold0400 (1-77)||(4504-4580)
[»] scaffold0365 (1 HSPs)
scaffold0365 (1-77)||(5148-5224)
[»] scaffold0318 (1 HSPs)
scaffold0318 (8-71)||(2864-2927)
[»] scaffold0129 (2 HSPs)
scaffold0129 (3-66)||(19793-19855)
scaffold0129 (3-66)||(19200-19262)
[»] scaffold0240 (1 HSPs)
scaffold0240 (33-77)||(17605-17649)
[»] scaffold0039 (1 HSPs)
scaffold0039 (33-70)||(109047-109084)
[»] scaffold0044 (1 HSPs)
scaffold0044 (4-64)||(56369-56429)
[»] scaffold0020 (1 HSPs)
scaffold0020 (103-137)||(171646-171680)


Alignment Details
Target: chr7 (Bit Score: 68; Significance: 2e-30; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 23455239 - 23455326
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtattgtttaaggaat 88  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||| ||||||||| |||||||||||||    
T  23455239 cccaaagtatttgaattccctcaaaacaatacattccctcaaaacattccctcatccaaacacattctaagggtgttgtttaaggaat 23455326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 35455871 - 35455802
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  35455871 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaa 35455802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 14603254 - 14603330
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||    
T  14603254 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactcttagagtatt 14603330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 6498759 - 6498834
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtattg 78  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6498759 caaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagagtattg 6498834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 39342634 - 39342701
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39342634 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 39342701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 9784923 - 9784989
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactc 67  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9784923 cccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcctccatccaaacacactc 9784989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28539160 - 28539230
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28539160 cccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactctaag 28539230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 23548603 - 23548672
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23548603 cccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 23548672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 26162131 - 26162198
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||    
T  26162131 caaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaa 26162198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30629124 - 30629061
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  30629124 cccaaagtatttaaattctcttaaaacaatacattccctcaaaacattcccccatccaaacaca 30629061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 5644742 - 5644668
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||| || |||||    
T  5644742 caaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactcttagagtatt 5644668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 29065884 - 29065819
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||    
T  29065884 caaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactct 29065819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 31632787 - 31632722
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  31632787 caaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactct 31632722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 40110801 - 40110737
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  40110801 aaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 40110737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 43955581 - 43955517
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  43955581 aaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 43955517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 30524322 - 30524255
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||||| ||||||||| |||||||||    
T  30524322 cccaaagtatttgaattccctcaaaacattacattccttcaaaacattactccatccatacacactct 30524255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 34398942 - 34399012
Alignment:
Q  3 caaagtatttgaattc-ccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| |||||||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  34398942 caaagtagttgaattcacctcaaaacattacattccctcaaaacattcccccatccaaacacactctaagg 34399012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 43955609 - 43955671
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  43955609 aaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 43955671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 2057460 - 2057395
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||    
T  2057460 caaagtagttgaattccctcaaaacattacattcgctcaaaacattcccccatccaaacacactct 2057395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 35776949 - 35777014
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||  ||||||||||||||||    
T  35776949 caaagtatttgaattccctcataacattacattccctcaaaacattccctcatccaaacacactct 35777014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 29065921 - 29065980
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||| |||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  29065921 ttgaattccctcaaaacattacattaccttaaaacattcctccatccaaacacactctaa 29065980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 2057491 - 2057557
Alignment:
Q  5 aagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||| ||||||||||| |||||| ||| ||||||||||| ||||| ||||||||||||||||||||    
T  2057491 aagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactctaag 2057557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 40110832 - 40110902
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||| ||||||||||| |||||| ||||||||||| ||||||| | ||||||||||||||||| ||||    
T  40110832 caaagtagttgaattccctcaaaacattacattccctcgaaacatttccccatccaaacacactcttaggg 40110902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 18789241 - 18789306
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactcta 69  Q
    |||||||||||||||||| | |||| || |||| ||||||| ||||||||||||||||||||||||    
T  18789241 aaagtatttgaattccctcataacattatattctctcaaaatattcctccatccaaacacactcta 18789306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 25189220 - 25189285
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||| |||||| | |||| ||||||||||||||  ||||||||||||||||    
T  25189220 caaagtatttgaattccctcaaaacattgcattacctcaaaacattcccacatccaaacacactct 25189285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 34388359 - 34388428
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| ||||||||||| |||| | |||||||||||||||||||||  ||| ||||||||||||||||    
T  34388359 caaagtagttgaattccctcaaaatattacattccctcaaaacattccatcattcaaacacactctaagg 34388428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 5644779 - 5644838
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||| |||||| |||||| ||||||||| |||| |||||||||||||||||||    
T  5644779 ttgaattccctcaaaacattacattacctcaaaacgttcccccatccaaacacactctaa 5644838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 66 - 163
Target Start/End: Original strand, 10624935 - 10625033
Alignment:
Q  66 tctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgtta-aattataaccgtacaattttcaatgcaa 163  Q
    |||||||| ||||||||| ||| | | | | | |||||||||||||||||||||||| |||||| | ||| | | ||||||||||||||||||||||||    
T  10624935 tctaagggcattgtttaaagaacccacaaaaagaaattatgtcttgaaaatacaagtcaaacacttattatagtcataaccgtacaattttcaatgcaa 10625033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 40854022 - 40853980
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggta 75  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  40854022 attccctcaaaacattcccccatccaaacacactctaagggta 40853980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 25120069 - 25119972
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||||||||||||||||||| | | | | ||||| |||||||||||||||| | ||| | |||||||| |||||||| ||||||||  |||||||    
T  25120069 ctaagggtattgtttaaggaatccacaaaaagaaattgtgtcttgaaaatacaattcaaatatatgttaaagttataaccatacaatttataatgcaa 25119972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 28514628 - 28514725
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||| ||||||||||||| | | | | | |||||||| |||||||||| |||| |||||| |||| || ||||||||||||||||| ||||||||    
T  28514628 ctaagggcattgtttaaggaacccataaaaagaaattatgccttgaaaatataagtcaaacacttgttcaagttataaccgtacaatttccaatgcaa 28514725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 32650626 - 32650588
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  32650626 attccctcaaaacattcctccatcgaaacacactctaag 32650588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 29195754 - 29195709
Alignment:
Q  23 aaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| |||||| |||||||| |||||||||||||||||||||||    
T  29195754 aaaacattacattacctcaaaatattcctccatccaaacacactct 29195709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 37869814 - 37869749
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaatt-ataaccgtacaattttcaatgcaa 163  Q
    ||||||||| || |||||| |||| |||||| ||||||| | ||||||||||||||||||||||||    
T  37869814 aaattatgttttaaaaatataagtcaaacacttgttaaagtcataaccgtacaattttcaatgcaa 37869749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 31191363 - 31191456
Alignment:
Q  67 ctaagggtattgtttaaggaatc-taaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatg 160  Q
    ||||||| ||||||||||||| | |||| ||  |||||||| |||||||||| |||| |||||| ||||||| |||||||||| |||||| |||||    
T  31191363 ctaagggcattgtttaaggaaccataaaaag--aaattatgccttgaaaatataagtcaaacacttgttaaagttataaccgtgcaatttccaatg 31191456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 62
Target Start/End: Original strand, 21635979 - 21636038
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaaca 62  Q
    ||||||| || |||||| | |||||| ||||||||||||||||||| | |||||||||||    
T  21635979 caaagtagttaaattccttcaaaacattacattccctcaaaacatttccccatccaaaca 21636038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 31913271 - 31913236
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||| |||||||||||||||||    
T  31913271 attccctcaaaacattcccccatccaaacacactct 31913236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 40854063 - 40854138
Alignment:
Q  3 caaagtatttgaattccctt-aaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    ||||||| |||||||||| | |||| | |||||||||||| |||||| | ||||||||||||||||| ||| ||||    
T  40854063 caaagtagttgaattcccctcaaaatattacattccctcagaacatttccccatccaaacacactcttaggatatt 40854138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 43791155 - 43791116
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaa 42  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  43791155 caaagtatttgaattccctcaaaacattacattccctcaa 43791116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 48488548 - 48488449
Alignment:
Q  65 ctctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||| | ||||||||||||| | | | | | ||||||||  ||||||||| |||| |||||| |||| || ||||||||||||||||| ||||||||    
T  48488548 ctctaagtgcattgtttaaggaacccataaaaagaaattatgctttgaaaatataagtcaaacacttgttgaagttataaccgtacaatttccaatgcaa 48488449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 13815000 - 13815038
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  13815000 attccctcaaaacattcccctatccaaacacactctaag 13815038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 30587909 - 30587943
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactc 67  Q
    |||||||||||||||||| ||||||||||||||||    
T  30587909 attccctcaaaacattcccccatccaaacacactc 30587943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 100 - 160
Target Start/End: Complemental strand, 1111793 - 1111732
Alignment:
Q  100 aattatgtcttgaaaatacaagtgaaacacatgttaaatt-ataaccgtacaattttcaatg 160  Q
    |||||||| ||||||||| |||| |||||| ||||||| | |||||| ||||||||||||||    
T  1111793 aattatgttttgaaaatataagtcaaacacttgttaaagtcataaccatacaattttcaatg 1111732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 15990956 - 15990895
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    ||||||||||||||||| | || ||| |||||| |||||||| ||| ||| |||||||||||    
T  15990956 caaagtatttgaattccttcaagacattacattacctcaaaatattactcaatccaaacaca 15990895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 160
Target Start/End: Complemental strand, 28646741 - 28646648
Alignment:
Q  68 taagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatg 160  Q
    ||||| |||||||||| ||||||| | | | |||||||||||| |||||| |||| ||| |  ||||||| | ||||||||||||||| |||||    
T  28646741 taaggatattgtttaaagaatctacaaaaagaaattatgtcttaaaaatataagtcaaaaatttgttaaagtcataaccgtacaatttccaatg 28646648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 37 - 70
Target Start/End: Original strand, 31913309 - 31913342
Alignment:
Q  37 cctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||| |||||||||||||||||||    
T  31913309 cctcaaaacattcccccatccaaacacactctaa 31913342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 44915260 - 44915195
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||| | |||||| ||| ||||||||||| ||||   ||||||||||||||||    
T  44915260 caaagtagttgaattccttcaaaacattacgttccctcaaaaaattctctcatccaaacacactct 44915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 77
Target Start/End: Complemental strand, 26415998 - 26415962
Alignment:
Q  41 aaaacattcctccatccaaacacactctaagggtatt 77  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  26415998 aaaacattcctcaatccaaacacactttaagggtatt 26415962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 71
Target Start/End: Original strand, 46482059 - 46482107
Alignment:
Q  23 aaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||| |||||||| |||| ||||| |||||| |||||||||||||||    
T  46482059 aaaacattacattccttcaacacatttctccattcaaacacactctaag 46482107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 29257367 - 29257437
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  29257367 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaag 29257437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 44346694 - 44346763
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  44346694 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacattctaa 44346763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 86
Target Start/End: Complemental strand, 40046869 - 40046786
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtattgtttaagga 86  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  40046869 caaagtagttgaattccctcaaaacattacattccctcaaaacattcatccatccaaacacactcttagggtattgattaagga 40046786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 36103166 - 36103101
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36103166 caaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 36103101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 70
Target Start/End: Complemental strand, 33902733 - 33902665
Alignment:
Q  2 ccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  33902733 ccaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaa 33902665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 515550 - 515617
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  515550 caaagtatttgaactcccttaaaacattacattccttcaaaacattcctccatccaaacacactctaa 515617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33377313 - 33377380
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||    
T  33377313 cccaaagtatttgaattccctcaaaacaatatattccctcaaaacattcccccatccaaacacactct 33377380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 44889419 - 44889352
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||    
T  44889419 caaagtatttgaattccctcaaaacattatattccctcaaaacattcctccatccaaacacactctaa 44889352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 74
Target Start/End: Original strand, 17110964 - 17111034
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||    
T  17110964 aaagtagttgaattccctcaaaacattacattccctcaaaacatttctccatccaaacacactctaagggt 17111034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29482823 - 29482888
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||    
T  29482823 cccaaagtatttgaattccctcaaaacaatacgttccctcaaaacattcccccatccaaacacact 29482888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 71
Target Start/End: Original strand, 28324684 - 28324748
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  28324684 gtatttgaattccttcaaaacattacattccctcaaaacattcctccatccaaacacactctaag 28324748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 14305 - 14239
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  14305 cccaaagtatttgaattcccttaaaacattacattccctccaaacattcc-ccatccaaacacactct 14239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 3853681 - 3853613
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  3853681 caaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 3853613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 3858139 - 3858071
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||| ||| |||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  3858139 caaagtagttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 3858071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 1088293 - 1088360
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| |||||||||| ||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  1088293 cccaaaatatttgaatttcctcaaaacaatacattctctcaaaacattcctccacccaaacacactct 1088360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 17110934 - 17110869
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||||    
T  17110934 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 17110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 42711374 - 42711439
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| | |||||||||||||||    
T  42711374 caaagtagttgaattccctcaaaacattacattccctcaaaacattccccaatccaaacacactct 42711439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 24045021 - 24044958
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||| | |||||| |||||||||||||||||||||  ||||||||||||||||||    
T  24045021 gtatttgaattccttcaaaacattacattccctcaaaacattccctcatccaaacacactctaa 24044958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 14800056 - 14800122
Alignment:
Q  5 aagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||| ||||||||||| |||||| ||| ||||||||||| ||||| ||||||||||||||||||||    
T  14800056 aagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactctaag 14800122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 35979022 - 35979084
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacac 65  Q
    |||||||||||||||||||   || | ||||||||||||||||||||||||||||||||||||    
T  35979022 caaagtatttgaattccctcttaagattacattccctcaaaacattcctccatccaaacacac 35979084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23011799 - 23011734
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||  || ||||||||||||||    
T  23011799 caaagtatttgaattccctcataacattacattccctcaaaacattctcccgtccaaacacactct 23011734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 7202934 - 7202978
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  7202934 attccctcaaaacattcctccatccaaacacactctaagagtatt 7202978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 4156262 - 4156324
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||| ||||||||||| |||||| ||||||||||||||| ||||  |||||||||||||||    
T  4156262 aaagtagttgaattccctcaaaacattacattccctcaaaatattctcccatccaaacacact 4156324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 62
Target Start/End: Complemental strand, 8689196 - 8689138
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaaca 62  Q
    |||||| ||||||||||| |||||| |||||||| |||||||||| |||||||||||||    
T  8689196 aaagtagttgaattccctcaaaacattacattccttcaaaacatttctccatccaaaca 8689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 14991749 - 14991692
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||| |||||| |||||| |||||||||||||| |||||||||||||||||    
T  14991749 ttgaattgcctcaaaacattacattacctcaaaacattcccccatccaaacacactct 14991692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 27322679 - 27322732
Alignment:
Q  15 attcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||| |||||||| ||||||||||||||||||||  |||||||||||||||||    
T  27322679 attcctttaaaacattacattccctcaaaacattctcccatccaaacacactct 27322732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 29611423 - 29611382
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  29611423 attccctcaaaacattcccccatccaaacacactctaagggt 29611382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 33986069 - 33986004
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||| || |||||| |||||| | |||| ||||||| |||||||||||||||||    
T  33986069 caaagtatttgaattctctcaaaacattacattacttcaagacattcccccatccaaacacactct 33986004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 10 - 74
Target Start/End: Original strand, 33902768 - 33902831
Alignment:
Q  10 tttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    |||||||||||| ||||||| |||||||||| ||||||||| |||||| |||||||||| |||||    
T  33902768 tttgaattccctcaaaacaaaacattccctc-aaacattcccccatcccaacacactcttagggt 33902831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Complemental strand, 8049319 - 8049272
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcc 50  Q
    ||||||||||||||||||| |||||| || ||||||||||||||||||    
T  8049319 caaagtatttgaattccctcaaaacattatattccctcaaaacattcc 8049272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 13404921 - 13404968
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcc 50  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||    
T  13404921 caaagtagttgaattccctcaaaacattacattccctcaaaacattcc 13404968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 30444963 - 30444998
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  30444963 attccctcaaaacattcctccatccaaacacactct 30444998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 42739984 - 42739949
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  42739984 attccctcaaaacattcctccatccaaacacactct 42739949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 30435300 - 30435250
Alignment:
Q  14 aattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    ||||||||  ||||| ||||||||||||||||||| |||||||||||||||    
T  30435300 aattccctccaaacattacattccctcaaaacatttctccatccaaacaca 30435250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 34008834 - 34008796
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34008834 attccctcaaaacattcccccatccaaacacactctaag 34008796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 7642621 - 7642686
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||||| ||||||||| |||| |||||| |||| || ||||||||||||||||| ||||||||    
T  7642621 aaattatgttttgaaaatataagtcaaacacttgttgaagttataaccgtacaatttacaatgcaa 7642686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 8409947 - 8409984
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  8409947 attcccttaaaacattcctccatccaaacacactctaa 8409984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 37268112 - 37268168
Alignment:
Q  14 aattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||| |||||| |||||| |||||||| ||||| | |||||||||||||||||    
T  37268112 aattccctcaaaacattacattacctcaaaatattcccctatccaaacacactctaa 37268168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 7202900 - 7202865
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7202900 attccctcaaaacattcatccatccaaacacactct 7202865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 13404884 - 13404829
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||| |||||| |||||| |||||||| ||| | |||||||||||||||    
T  13404884 ttgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 13404829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 14800014 - 14799979
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||| |||||||||||||||||    
T  14800014 attccctcaaaacattcccccatccaaacacactct 14799979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 13177882 - 13177816
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgt 133  Q
    ||||||| ||||||||||||||||  | | | ||| | |||||||||||||||||| ||||||||||    
T  13177882 ctaagggcattgtttaaggaatcttcaaaaagaaagtttgtcttgaaaatacaagtcaaacacatgt 13177816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 137
Target Start/End: Complemental strand, 24999484 - 24999446
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa 137  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  24999484 aaattatgtcttgaaaatacaagtcaaacacttgttaaa 24999446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 31807465 - 31807409
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||| |||||||| |||||||||||   ||||||||||||||||    
T  31807465 ttgaattccctcaaaacattacattcc-tcaaaacattctctcatccaaacacactct 31807409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 32626072 - 32626117
Alignment:
Q  23 aaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||||||||| ||||| |||||||| ||||||||    
T  32626072 aaaacattacattccctcaaaagattcccccatccaagcacactct 32626117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 38573313 - 38573378
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    |||||||| |||||||||| |||| |||||  |||| || ||||||||||||||||| ||||||||    
T  38573313 aaattatgccttgaaaatataagtcaaacatttgttgaagttataaccgtacaatttccaatgcaa 38573378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 30435350 - 30435386
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactcta 69  Q
    |||||||||||||||| | ||||||||||||||||||    
T  30435350 attccctcaaaacatttccccatccaaacacactcta 30435386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 1583815 - 1583885
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  1583815 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactctaag 1583885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 35047685 - 35047758
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  35047685 cccaaagtatttgaattcccttaaaacaatacatttcctcaaaacattcccccatccaaacacactctaagggt 35047758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 769103 - 769036
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  769103 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 769036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 11141372 - 11141305
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11141372 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 11141305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 33189263 - 33189330
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33189263 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 33189330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 14365792 - 14365861
Alignment:
Q  2 ccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14365792 ccaaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaag 14365861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 3092349 - 3092282
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||    
T  3092349 cccaaagtatttgaatttcctcaaaacaatacattccctcaaaacattcctccatccaaatacactct 3092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 11716473 - 11716405
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||    
T  11716473 caaagtagttgaattccctcaaaacattacattccctcaaaacattcttccatccaaacacactctaag 11716405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 14365765 - 14365700
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  14365765 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 14365700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 13017844 - 13017776
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |  |||||||||||||||||||    
T  13017844 caaagtatttgaattcccttaaaatattacattccctcaaaacatttccacatccaaacacactctaag 13017776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 39630285 - 39630225
Alignment:
Q  8 tatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||    
T  39630285 tatttgaattccctcaaaacaatacattccctcaaaacatttctccattcaaacacactct 39630225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 41461617 - 41461677
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  41461617 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaag 41461677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 10480184 - 10480119
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||||   |||| ||||||||||||||||||||| |||||||||||||||||    
T  10480184 caaagtatttgaattccctcgtaacattacattccctcaaaacattcccccatccaaacacactct 10480119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 14537264 - 14537199
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  14537264 caaagtagttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactct 14537199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 27033555 - 27033490
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||    
T  27033555 caaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactct 27033490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 11532261 - 11532324
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||||||||||| |||||| ||||||||||| ||| ||||| |||||||||||||||    
T  11532261 caaagtatttgaattccctcaaaacattacattccctccaaatattcccccatccaaacacact 11532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 11793960 - 11793897
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||||||||||| | |||| ||||||||||||||| ||||| |||||||||||||||    
T  11793960 caaagtatttgaattccctcataacattacattccctcaaaatattcccccatccaaacacact 11793897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 784888 - 784954
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||| ||||||||||| |||||| |||||||| |||||| ||||| |||||||||||||||||||    
T  784888 aaagtagttgaattccctcaaaacattacattccatcaaaatattcccccatccaaacacactctaa 784954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 28740661 - 28740599
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacac 65  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||| | |||| |||||||||    
T  28740661 caaagtatttgaattccctcaaaacattacattccctcaaaacatttccccattcaaacacac 28740599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 11684656 - 11684603
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||    
T  11684656 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacaca 11684603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 17180354 - 17180297
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||    
T  17180354 ttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 17180297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 163
Target Start/End: Original strand, 36903952 - 36904049
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||| ||||||||||||| | | | | | |||||||||||||||||||||||| |||||| | ||||| | ||||||||||||||| ||||||||    
T  36903952 ctaagggcattgtttaaggaacccacaaaaagaaattatgtcttgaaaatacaagtcaaacacttattaaagtcataaccgtacaatttccaatgcaa 36904049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 14954330 - 14954266
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| |||||||| ||||||| | ||||||| ||||||||||||||| |||||||||||||||    
T  14954330 aaagtagttgaattctcttaaaagattacattcactcaaaacattcctctatccaaacacactct 14954266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 160
Target Start/End: Complemental strand, 9047695 - 9047633
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatg 160  Q
    ||||||||| |||||||||||||| |||||| ||||||| | |||||||||||||||||||||    
T  9047695 aaattatgttttgaaaatacaagtcaaacacttgttaaagtcataaccgtacaattttcaatg 9047633  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 784858 - 784793
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| || |||||| | |||||| |||||||||||||||||||  ||||||||||||||||||    
T  784858 caaagtagttaaattccttcaaaacattacattccctcaaaacatttttccatccaaacacactct 784793  T

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Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 7309769 - 7309806
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccc 38  Q
    ||||||||||||||||||||||||||||||||||||||    
T  7309769 cccaaagtatttgaattcccttaaaacaatacattccc 7309806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 60
Target Start/End: Original strand, 11716501 - 11716550
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaa 60  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  11716501 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaa 11716550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 17905719 - 17905654
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||| |||||||||||| |||||||| ||||||| |||||||||||||  ||||| ||||||||||    
T  17905719 caaaatatttgaattcctttaaaacattacattctctcaaaacattccctcatcctaacacactct 17905654  T

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Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 60
Target Start/End: Complemental strand, 30698342 - 30698289
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaa 60  Q
    ||||||||||||| | |||||| ||||||||||||||||||||| |||||||||    
T  30698342 gtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaa 30698289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 14537305 - 14537345
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  14537305 attccctcaaaacattcccccatccaaacacactctaaggg 14537345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 159
Target Start/End: Original strand, 38402528 - 38402620
Alignment:
Q  68 taagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaat 159  Q
    |||||| ||||||||||||||| | | | | ||||||||| |||||||||||||| |||||| | ||||| | ||||||||||||||| ||||    
T  38402528 taagggcattgtttaaggaatccataaaaagaaattatgttttgaaaatacaagttaaacacttcttaaagtcataaccgtacaatttccaat 38402620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 45094480 - 45094552
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtat 76  Q
    |||||| || |||||||| |||||| || ||||||||||||||||||  ||| |||||||||||||| |||||    
T  45094480 aaagtagttaaattccctcaaaacattatattccctcaaaacattccctcattcaaacacactctaatggtat 45094552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 10244240 - 10244173
Alignment:
Q  5 aagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||| ||||||||||| |||||| ||| |||||||| || ||||  |||||||||||||||||||||    
T  10244240 aagtagttgaattccctcaaaacattactttccctcagaatattctcccatccaaacacactctaagg 10244173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 11684696 - 11684731
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  11684696 attccctcaaaacattcctccatccaaacacactct 11684731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 7228024 - 7228094
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    |||||| |||||| | |||||| ||||||| ||||||||||| | ||||||||||||||||| | ||||||    
T  7228024 gtatttaaattccttcaaaacattacattctctcaaaacatttccccatccaaacacactcttaaggtatt 7228094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 74
Target Start/End: Original strand, 11824786 - 11824827
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    |||||||||||||||||| ||||||||||||||| |||||||    
T  11824786 attccctcaaaacattcccccatccaaacacactttaagggt 11824827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 8735909 - 8735841
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||||   |||| || |||||||||||||||    ||||||||||||||||||||    
T  8735909 caaagtatttgaattccctcgtaacattatattccctcaaaacatgttcccatccaaacacactctaag 8735841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 8736461 - 8736500
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  8736461 attccctcaaaacattccctcatccaaacacactctaagg 8736500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 2274801 - 2274859
Alignment:
Q  8 tatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||||||||||| | |  ||| |||| |||||||||| ||||||||||||||    
T  2274801 tatttgaattcccttaaaatattgtattacctcgaaacattccttcatccaaacacact 2274859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 2924813 - 2924775
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  2924813 attccctcaaaacattcttctatccaaacacactctaag 2924775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 20935759 - 20935718
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggta 75  Q
    |||||||||||||||||| ||||||||||||||||||| ||||    
T  20935759 attccctcaaaacattcc-ccatccaaacacactctaaaggta 20935718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 21504503 - 21504465
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  21504503 attccctcaaaacattccccgatccaaacacactctaag 21504465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 32839656 - 32839694
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctca 41  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  32839656 caaagtatttgaattccctcaaaacattacattccctca 32839694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 137
Target Start/End: Original strand, 39791522 - 39791592
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa 137  Q
    ||||||||||||||||| ||||| | | | | ||||||||| |||||||||||||| |||||  |||||||    
T  39791522 ctaagggtattgtttaaagaatccacaaaaagaaattatgttttgaaaatacaagtcaaacatttgttaaa 39791592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 83
Target Start/End: Original strand, 44256211 - 44256280
Alignment:
Q  13 gaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtattgtttaa 83  Q
    ||||||||| |||||| |||||| |||||||  ||||| ||||||||||||||| |||| |||||| ||||    
T  44256211 gaattccctcaaaacattacattacctcaaat-attcccccatccaaacacactataagagtattggttaa 44256280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 223986 - 223921
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    |||||||  |||||||||| |||| |||||| | || || ||||||||||||||||||||||||||    
T  223986 aaattataccttgaaaatataagtcaaacacttattgaagttataaccgtacaattttcaatgcaa 223921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 2854487 - 2854426
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaaca 128  Q
    ||||||| || |||||||||||| | ||| | ||||| |||||||||||||||||| |||||    
T  2854487 ctaagggcatcgtttaaggaatccacataaagaaattttgtcttgaaaatacaagttaaaca 2854426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 3345798 - 3345765
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacact 66  Q
    |||||||||||||||||| |||||||||||||||    
T  3345798 attccctcaaaacattcccccatccaaacacact 3345765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 62
Target Start/End: Complemental strand, 11824733 - 11824704
Alignment:
Q  33 attccctcaaaacattcctccatccaaaca 62  Q
    ||||||||||||||||||||||||||||||    
T  11824733 attccctcaaaacattcctccatccaaaca 11824704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 137
Target Start/End: Original strand, 15335826 - 15335894
Alignment:
Q  69 aagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa 137  Q
    ||||| ||||||||||||| | | | ||| || || |||||||||||||||||| ||||| ||||||||    
T  15335826 aagggcattgtttaaggaacccacaaagagaatttttgtcttgaaaatacaagtcaaacatatgttaaa 15335894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 19231305 - 19231345
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    |||||||||||||||||| ||||||||||||| ||| ||||    
T  19231305 attccctcaaaacattcccccatccaaacacaatcttaggg 19231345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 41283360 - 41283420
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaattataaccgtacaattttcaat 159  Q
    |||||||  |||||||||| |||| ||| |  |||||| ||||||||||||||||||||||    
T  41283360 aaattataccttgaaaatataagtcaaatatttgttaagttataaccgtacaattttcaat 41283420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 41461569 - 41461517
Alignment:
Q  14 aattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||||| |||||| |||||| |||||||| ||| | |||||||||||||||    
T  41461569 aattccctcaaaacattacattacctcaaaatatttccccatccaaacacact 41461517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 66
Target Start/End: Complemental strand, 7217 - 7153
Alignment:
Q  2 ccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7217 ccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 7153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 64; Significance: 4e-28; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 34244988 - 34245059
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  34244988 caaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaagggt 34245059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 29889442 - 29889513
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||||||||||||| |||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  29889442 caaagtatttgaattccctcaaaacattacattccatcaaaacattcctccatccaaacacactctaagggt 29889513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 28918230 - 28918165
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  28918230 caaagtatttgaatttccttaaaacattacattccctcaaaacattcctccatccaaacacactct 28918165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 72
Target Start/End: Complemental strand, 9285712 - 9285643
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  9285712 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaagg 9285643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 1368536 - 1368474
Alignment:
Q  9 atttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||    
T  1368536 atttgaattcccttaaaatattacattctctcaaaacattcctccatccaaacacactctaag 1368474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 4 - 76
Target Start/End: Complemental strand, 8574759 - 8574687
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtat 76  Q
    |||||| ||||||||||| |||||| ||||||| ||||||||||| | |||||||||||||||||||||||||    
T  8574759 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactctaagggtat 8574687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 6919773 - 6919710
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||| ||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  6919773 caaagtagttgaattccctcaaaacattacattccctcaaaccattcctccatccaaacacact 6919710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 13487340 - 13487273
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||| ||||| |||||||||||||    
T  13487340 caaagtatttgaattccctcataacactacattccctcaaaacattcccccatctaaacacactctaa 13487273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 776144 - 776077
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||| ||||||| ||| |||||| ||||||||||||||||||| ||||||| ||||||||||||||    
T  776144 aaagtagttgaatttcctcaaaacattacattccctcaaaacatttctccatctaaacacactctaag 776077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 6919809 - 6919872
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||||| |||||| ||| ||||||||||||||||| ||||||||||||||||| |||||    
T  6919809 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactcttagggt 6919872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 9763114 - 9763171
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||| |||||| |||||||| |||||||||||||||||||||||    
T  9763114 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactct 9763171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 8574760 - 8574824
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||||| |||||| ||||||| ||||||||||| | |||||||||||||||||    
T  8574760 aaagtagttgaattccctcaaaacattacattcactcaaaacatttccccatccaaacacactct 8574824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 9763077 - 9763009
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||| | || |||||||||||| ||||    
T  9763077 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccttccaaacacactataag 9763009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 15299519 - 15299585
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||| ||||||||| | |||||| ||||||||||||||||||||| ||||||||||||| |||||    
T  15299519 caaagtagttgaattccttcaaaacattacattccctcaaaacattcc-ccatccaaacacattctaa 15299585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 15832533 - 15832470
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    |||||||||||||||||||||||||||| |||||||| || ||||||| |  ||||||||||||    
T  15832533 cccaaagtatttgaattcccttaaaacattacattccttcgaaacattacctcatccaaacaca 15832470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 33733470 - 33733430
Alignment:
Q  30 tacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  33733470 tacattccctcaaaacattcccccatccaaacacactctaa 33733430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 776175 - 776239
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||| ||| |||||| |||||||||||||||||||   | |||||||||||||||    
T  776175 aaagtagttgaatttcctcaaaacattacattccctcaaaacattttcctatccaaacacactct 776239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 15299464 - 15299412
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccat 55  Q
    ||||||| |||||||| || |||||| ||||||| ||||||||||||||||||    
T  15299464 caaagtagttgaattctctcaaaacattacattcgctcaaaacattcctccat 15299412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 10737728 - 10737794
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||| |||| ||||||||  ||| |||| ||| |||| ||||||||||||||||||||| |||||||    
T  10737728 aaagaatttaaattccctcgaaaaaatatattacctcgaaacattcctccatccaaacatactctaa 10737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 68
Target Start/End: Complemental strand, 1195384 - 1195351
Alignment:
Q  35 tccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||| |||||||||||||||||    
T  1195384 tccctcaaaacattcccccatccaaacacactct 1195351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 6100759 - 6100694
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||||||||||||||||| || |||||| | ||||| | |||||| || ||||||||||||||    
T  6100759 aaattatgtcttgaaaatacatgtcaaacacttcttaaagtcataaccctataattttcaatgcaa 6100694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 4e-28; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 41762218 - 41762285
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41762218 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcccccatccaaacacactct 41762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 927369 - 927302
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||    
T  927369 cccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttccccatccaaacacactct 927302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 37722899 - 37722970
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||||||||    
T  37722899 caaagtatttgaattccctcaaaacattacattccctcaaaatattcccccatccaaacacactctaagggt 37722970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 15804387 - 15804316
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||| |||||    
T  15804387 caaagtagttgaattccctcaaaacactacattccctcaaaacattcccccatccaaacacactctcagggt 15804316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 19533912 - 19533975
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||    
T  19533912 caaagtatttgaattccctcataacattacattccctcaaaacattcctccatccaaacacact 19533975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 22767016 - 22766950
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||    
T  22767016 aaagtatttgaattccctcaaaacattatattccctcaaaacattcccccatccaaacacactctaa 22766950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 22303879 - 22303944
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  22303879 gtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactctaagg 22303944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 9764432 - 9764500
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||    
T  9764432 caaagtagttgaattccctcaaaacattacattccctcgaaacattcccccatccaaacacactctaag 9764500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 15374025 - 15373957
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||||||| |||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  15374025 caaagtagttgaattccctcaaaacattacattccctcaaaaaattcttccatccaaacacactctaag 15373957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 2721565 - 2721628
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  2721565 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 2721628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 68
Target Start/End: Original strand, 15374057 - 15374119
Alignment:
Q  6 agtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  15374057 agtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 15374119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 26281275 - 26281341
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||| ||||||||||| |||||| |||||||||||||||| |||| |||||||||||||||||||    
T  26281275 aaagtagttgaattccctcaaaacattacattccctcaaaacgttcccccatccaaacacactctaa 26281341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 25935295 - 25935360
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||| ||| | |||| ||||||||||||||||||||| |||||||||||||||||    
T  25935295 caaagtatttgaatttcctcataacattacattccctcaaaacattcccccatccaaacacactct 25935360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 40090419 - 40090484
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||| | |||||| |||||| |||||||||||||| |||||||||||||||||    
T  40090419 caaagtatttgaattccatcaaaacattacatttcctcaaaacattcccccatccaaacacactct 40090484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 40643919 - 40643976
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  40643919 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 40643976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 2316442 - 2316378
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||    
T  2316442 aaagtagttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacacactct 2316378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 2 - 66
Target Start/End: Original strand, 20320652 - 20320716
Alignment:
Q  2 ccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||||||||||||||||| | |||||||| ||||||||||| | ||||||||||||||    
T  20320652 ccaaagtatttgaattcccttaaaatattacattccttcaaaacattcattcatccaaacacact 20320716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 3563341 - 3563278
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactc 67  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||    
T  3563341 aaagtagttgaattccctcaaaacattacattccctcaaaacattcccctatccaaacacactc 3563278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 20523228 - 20523291
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactc 67  Q
    |||||| ||||||||||| |||||| ||||||| ||||||||||||| ||||||||||||||||    
T  20523228 aaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacactc 20523291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 9894327 - 9894388
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    |||||||||||||||||||   |||| ||||||||||||||||||||| |||||||||||||    
T  9894327 caaagtatttgaattccctggtaacattacattccctcaaaacattcccccatccaaacaca 9894388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 28828422 - 28828369
Alignment:
Q  13 gaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||| |||||| ||||||||||||||||||||| |||||||||||||||    
T  28828422 gaattccctcaaaacattacattccctcaaaacattcccccatccaaacacact 28828369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 32250107 - 32250167
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  32250107 gtatttgaattccctcaaaacattactttccctcaaaacattcc-ccatccaaacacactct 32250167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 2316473 - 2316544
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggta 75  Q
    ||||||| |||||||| || |||||| |||||||||||||||||||  |||||||||||||||||||| ||||    
T  2316473 caaagtagttgaattctctcaaaacattacattccctcaaaacatt-ttccatccaaacacactctaaaggta 2316544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 9764402 - 9764338
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||||| |||||| ||| ||||||||||| ||||| |||||||||||||||||    
T  9764402 aaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactct 9764338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 5658821 - 5658770
Alignment:
Q  23 aaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  5658821 aaaacattacattccctcaaaacatttctccatccaaacacactcttagggt 5658770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 14834889 - 14834826
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||| |||||||||||||| ||||||||||| ||||||||  |||| ||||||||||    
T  14834889 caaagtatttggattcccttaaaacattacattccctcgaaacattctcccatgcaaacacact 14834826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 20523198 - 20523131
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||| ||||||||||| | || | ||||||||||||||||||||  |||||||||||||||||||    
T  20523198 caaagtagttgaattccctcagaatattacattccctcaaaacattctcccatccaaacacactctaa 20523131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 74
Target Start/End: Complemental strand, 34982272 - 34982210
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||||| |||||| ||||||||||||||||||||| | ||||||||||||||| |||||    
T  34982272 ttgaattccctcaaaaca-tacattccctcaaaacattcccctatccaaacacactcttagggt 34982210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 35379408 - 35379342
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||| ||||||||||||| |||||| ||||||  ||||||||||||| |||||||||||||||||||    
T  35379408 caaagaatttgaattccctcaaaacattacattatctcaaaacattcc-ccatccaaacacactctaa 35379342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 37145506 - 37145569
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||||||||||||| || | |||| ||||||||||||||||||||| |||||||||| ||||    
T  37145506 caaagtatttgaattctctcataacattacattccctcaaaacattcccccatccaaacccact 37145569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 34982313 - 34982351
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||||||||||||||||||||||||    
T  34982313 attccctcaaaacattcctccatccaaacacactctaag 34982351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 40809406 - 40809336
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||| ||||||||||| |||||| || |||| ||||||||||| | ||||||||||||||||| ||||    
T  40809406 caaagtagttgaattccctcaaaacattatattctctcaaaacatttccccatccaaacacactcttaggg 40809336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 10314714 - 10314649
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||| ||||||||||||||||||| | |||||| | |||||||||| ||||||||||||| |||||    
T  10314714 caaaatatttgaattcccttaaaatattacatttcttcaaaacatttctccatccaaacatactct 10314649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 32470939 - 32470882
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||| | |||||| ||||||||||||||||||| ||||||||||| |||||||    
T  32470939 ttgaattccttcaaaacattacattccctcaaaacatttctccatccaaatacactct 32470882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 15804399 - 15804451
Alignment:
Q  14 aattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||||| |||||| ||||||||||||||||||| | |||||||||||||||    
T  15804399 aattccctcaaaacattacattccctcaaaacatttccccatccaaacacact 15804451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 23092057 - 23092121
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||| ||||| |||||| |||||||  |||||||||||| |||||||||||||||||    
T  23092057 aaagtagttgaactccctcaaaacattacattcgttcaaaacattcccccatccaaacacactct 23092121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 13243514 - 13243448
Alignment:
Q  13 gaattcccttaaaacaatacattccctcaaaacattcctccatc--caaacacactctaagggtatt 77  Q
    ||||||||| |||||| |||||||||||||||||||||  ||||  |||||||||||| ||||||||    
T  13243514 gaattccctcaaaacattacattccctcaaaacattccctcatccacaaacacactcttagggtatt 13243448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 15270871 - 15270906
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  15270871 attccctcaaaacattcctccatccaaacacactct 15270906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 23092026 - 23091960
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||| ||||||||| | |||||| ||||||||||||||| ||||| ||||| ||||||||||||||    
T  23092026 aaagtagttgaattccttcaaaacattacattccctcaaaatattcc-ccatcaaaacacactctaag 23091960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 157
Target Start/End: Complemental strand, 32292345 - 32292254
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttca 157  Q
    ||||||||||||||||||||| ||| | | |||||||| || ||||||||| |||| |||||  ||||||| |||||| | |||||||||||    
T  32292345 ctaagggtattgtttaaggaacctataaaaataaattacgttttgaaaatataagtcaaacatttgttaaagttataaacctacaattttca 32292254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 33245378 - 33245441
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactc 67  Q
    |||||| |||||||  || |||||| |||||||| |||||||||||| ||||||||||||||||    
T  33245378 aaagtagttgaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactc 33245441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 16515061 - 16515000
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||||||| |||||  ||||||||||||||||||| ||||||||||||||| | ||||||    
T  16515061 ttgaattccctcaaaaccttacattccctcaaaacatt-ctccatccaaacacattataaggg 16515000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 32390066 - 32390140
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    ||||||| ||||||||||| |||||| ||||||||||||||| ||||    ||||||||||||||| || |||||    
T  32390066 caaagtagttgaattccctcaaaacattacattccctcaaaaaattctctaatccaaacacactcttagagtatt 32390140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 33146096 - 33146058
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33146096 attccctcaaaacattcccccatccaaacacactctaag 33146058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 33146226 - 33146188
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33146226 attccctcaaaacattcccccatccaaacacactctaag 33146188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 2550363 - 2550322
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  2550363 attccctcaaaacattcccccatccaaacacactcttagggt 2550322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 6634072 - 6634015
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||| |||||| |||||||| || || |||||||||||||||||    
T  6634072 ttgaattccctcaaaacattacattacctcaaaatatccccccatccaaacacactct 6634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 16515120 - 16515177
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||| |||||||||| |||||||||   ||||||||||||||||    
T  16515120 ttgaattccctcaaaacattacattccctaaaaacattctctcatccaaacacactct 16515177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 74
Target Start/End: Complemental strand, 22302574 - 22302533
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  22302574 attccctcaaaacattaccccatccaaacacactctaagggt 22302533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 28828449 - 28828509
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||| |||||| |||||| |||||||| ||| | ||||||||||||||| ||||    
T  28828449 ttgaattccctcaaaacattacattacctcaaaatatttccccatccaaacacactataag 28828509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 32390034 - 32389974
Alignment:
Q  6 agtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||| ||||||||||| |||| | |||||||| ||||||||||||  ||||||||||||||    
T  32390034 agtagttgaattccctcaaaatattacattccttcaaaacattccctcatccaaacacact 32389974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 70
Target Start/End: Complemental strand, 34105119 - 34105087
Alignment:
Q  38 ctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||||||||||||||||||||||    
T  34105119 ctcaaaacattcctccatccaaacacactctaa 34105087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 40809444 - 40809504
Alignment:
Q  12 tgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| || |||||| ||||||| ||||||||||| | ||||| |||||||||||||||    
T  40809444 tgaattcactcaaaacattacattctctcaaaacatttccccatctaaacacactctaagg 40809504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 22305147 - 22305112
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||| |||||||||||||||||    
T  22305147 attccctcaaaacattcccccatccaaacacactct 22305112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 40643871 - 40643832
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagg 72  Q
    |||||||||||||||| ||||||||||||||||| |||||    
T  40643871 attccctcaaaacatttctccatccaaacacactataagg 40643832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 32470976 - 32471043
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| ||||||||||| |||||| ||||||||||||| |  || |  ||||||||||||||||||||    
T  32470976 caaagtagttgaattccctcaaaacattacattccctcaaga--tttccacatccaaacacactctaagg 32471043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 6634108 - 6634176
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||| ||| |||||| | ||||||||||| |||  |||| |||||||||||||| |||||    
T  6634108 caaagtagttgaactcctttaaaatattacattccctcgaaatgttcccccatccaaacacaccctaag 6634176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 36397994 - 36398064
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36397994 cccaaagtatttgaattccctcaaaacaatacattccctcaaaacattcccccatccaaacacactctaag 36398064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 34088638 - 34088571
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  34088638 cccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttctccatccaaacacactct 34088571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 48947672 - 48947601
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    |||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  48947672 cccaaagtatttgaattctctcaaaacaatacattccctcaaaacattcttccatccaaacacactctaagg 48947601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 44692916 - 44692987
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  44692916 caaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactcttagggt 44692987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 46672810 - 46672877
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  46672810 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 46672877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 53129848 - 53129915
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||    
T  53129848 cccaaagtatttgaattcccttaaaacattacattccctcgaaacattccctcatccaaacacactct 53129915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 53470434 - 53470504
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||| |  |||||||||||||||||||    
T  53470434 cccaaagtatttgaattccctcaaaacaatagattccctcaaaacatttcctcatccaaacacactctaag 53470504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 47767493 - 47767428
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||||||| | |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  47767493 gtatttgaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactctaagg 47767428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 671624 - 671691
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||    
T  671624 cccaaagtatctgaattccctcaaaacaatacattccctcaaaacattcccctatccaaaaacactct 671691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 9129438 - 9129503
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||    
T  9129438 caaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 9129503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 9137545 - 9137610
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||    
T  9137545 caaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactct 9137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 64
Target Start/End: Original strand, 21307539 - 21307600
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||| |||||||||||||    
T  21307539 caaagtatttgaattccctcaaaacattacattcccgcaaaacattcccccatccaaacaca 21307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 27251988 - 27252053
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||| || |||||||||||||||||    
T  27251988 caaagtagttgaattccctcaaaacattacattccctcaaaacatccccccatccaaacacactct 27252053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 44692879 - 44692818
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||||||    
T  44692879 ttgaattccctcaaaacattactttccctcaaaacattcccccatccaaacacactctaagg 44692818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 49457400 - 49457343
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  49457400 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 49457343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 37054455 - 37054391
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||| | |||||| |||||||||| |||||||||| ||||||||||||||||||||    
T  37054455 gtatttgaattccttcaaaacattacattcccttaaaacattcccccatccaaacacactctaag 37054391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Original strand, 42005964 - 42006030
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    |||||| |||||| | |||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  42005964 gtatttaaattccttcaaaacattacattccctcaaaacattcccccatccaaacacactcttaggg 42006030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 19475881 - 19475824
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaa 60  Q
    ||||||||||||||| ||| | |||| |||||||||||||||||||||||||||||||    
T  19475881 caaagtatttgaattacctcataacattacattccctcaaaacattcctccatccaaa 19475824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 44436315 - 44436258
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  44436315 ttgaatttcctcaaaacattacattccctcaaaacattcccccatccaaacacactct 44436258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 45249487 - 45249390
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||| ||||||||||||| | | | | | |||||||||||||||||||||||| |||||  ||||||| | ||||||||||||||| ||||||||    
T  45249487 ctaagggcattgtttaaggaacccacaaaaagaaattatgtcttgaaaatacaagtcaaacatttgttaaagtcataaccgtacaatttccaatgcaa 45249390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 5415847 - 5415783
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||||| |||||| ||||||||||||||| ||||| | |||||||||||||||    
T  5415847 aaagtagttgaattccctcaaaacattacattccctcaaaatattcccctatccaaacacactct 5415783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 28092279 - 28092211
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||||||| ||||||  ||||| |||||||||||||| ||||||||||| ||||||||    
T  28092279 caaagtaattgaattccctcaaaacatcacatttcctcaaaacattcccccatccaaacatactctaag 28092211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 39110459 - 39110391
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||||||  |||||| ||||||| ||||||||||| || |||||||||||||||||||    
T  39110459 caaagtagttgaattcccacaaaacattacattcgctcaaaacatttcttcatccaaacacactctaag 39110391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 44288467 - 44288534
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||| | |||||| || ||| |||||||||||||||||||||||||| ||| ||||    
T  44288467 aaagtatttgaattccatcaaaacattatattacctcaaaacattcctccatccaaacatactataag 44288534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 31070471 - 31070415
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaa 60  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||    
T  31070471 caaagtagttgaattccctcaaaacattacattccctcaaaacattcc-ccatccaaa 31070415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 5415878 - 5415942
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||| | |||||| ||| ||||||||||| ||||| |||||||||||||||||    
T  5415878 aaagtagttgaattccatcaaaacattactttccctcaaaatattcccccatccaaacacactct 5415942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 31189404 - 31189471
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||||| || |||||| |||||| |||||||||||||   ||| ||||||||||||||    
T  31189404 caaagtatttgaattctctcaaaacattacattacctcaaaacattctctcattcaaacacactctaa 31189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 46429498 - 46429561
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||| | |||||| |||||| |||||||| |||||  ||||||||||||||||||||||    
T  46429498 ttgaattccttcaaaacattacattacctcaaaatattccctcatccaaacacactctaagggt 46429561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 54761583 - 54761618
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||||||||||||||||||||    
T  54761583 attccctcaaaacattcctccatccaaacacactct 54761618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 30767167 - 30767101
Alignment:
Q  5 aagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||||| | | |||| || |||||||||||||||| | ||||||||| ||||||||||    
T  30767167 aagtatttgaattccttcataacattagattccctcaaaacattaccccatccaaatacactctaag 30767101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 35279920 - 35279970
Alignment:
Q  14 aattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    ||||| || |||||| ||||||||||||||||||||| |||||||||||||    
T  35279920 aattcactcaaaacattacattccctcaaaacattcccccatccaaacaca 35279970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 46429449 - 46429411
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  46429449 attccctcaaaacattcccccatccaaacacactctaag 46429411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 7302407 - 7302346
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||| |||||||| | |||||| ||||||| |||||||||||||  ||||||||||||||||    
T  7302407 gtatctgaattccttcaaaacattacattctctcaaaacattccctcatccaaacacactct 7302346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 47284328 - 47284389
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||||| |||||| |||||| |||||||| ||||   ||||||||||||||||||||    
T  47284328 ttgaattccctcaaaacattacattacctcaaaatattctctcatccaaacacactctaagg 47284389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 332081 - 332125
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||    
T  332081 attccctcaaaacattcttccatccaaacacactcttaaggtatt 332125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 9129408 - 9129344
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||| | |||||| ||||||||||||||| | ||  |||||||||||||||||    
T  9129408 aaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactct 9129344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 9137515 - 9137451
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||| | |||||| ||||||||||||||| | ||  |||||||||||||||||    
T  9137515 aaagtagttgaattccatcaaaacattacattccctcaaaatagtctcccatccaaacacactct 9137451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 46001420 - 46001364
Alignment:
Q  12 tgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||  ||||| |||||| |||||||| ||||| |||||||||||||||||    
T  46001420 tgaattccctcgaaacattacattacctcaaaatattccgccatccaaacacactct 46001364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 30766614 - 30766571
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcc 50  Q
    ||||||||||||| | |||||| |||||||||||||||||||||    
T  30766614 gtatttgaattccttcaaaacattacattccctcaaaacattcc 30766571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Complemental strand, 25655350 - 25655312
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  25655350 attccctcaaaacatttccccatccaaacacactctaag 25655312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 27251947 - 27251905
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggta 75  Q
    ||||||| |||||||||| ||||||||||||| ||||||||||    
T  27251947 attcccttaaaacattcccccatccaaacacattctaagggta 27251905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 67
Target Start/End: Original strand, 38506895 - 38506929
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactc 67  Q
    |||||||||||||||||||| ||||||||||||||    
T  38506895 attccctcaaaacattcctctatccaaacacactc 38506929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 46635921 - 46635855
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||| ||| |||||| ||||||  |||||||||||    ||||||||||||||||||    
T  46635921 aaagtatttgaatttcctcaaaacattacattagctcaaaacattttctcatccaaacacactctaa 46635855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 52527101 - 52527039
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacac 65  Q
    |||||||||||||||||   | |||| ||||| || |||||||||||| ||||||||||||||    
T  52527101 caaagtatttgaattcctccataacattacatcccttcaaaacattcccccatccaaacacac 52527039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 332027 - 331991
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  332027 attccctcaaaacattc-tccatccaaacacactctaa 331991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 27485507 - 27485474
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacact 66  Q
    |||||||||||||||||| |||||||||||||||    
T  27485507 attccctcaaaacattcccccatccaaacacact 27485474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 47284222 - 47284262
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    |||||||||||| |||||  |||||||||||||||||||||    
T  47284222 attccctcaaaatattccctcatccaaacacactctaaggg 47284262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 47714322 - 47714286
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactcta 69  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  47714322 attccctcaaaacattcatccatccaagcacactcta 47714286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2125924 - 2125854
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  2125924 cccaaagtatttgaattccctcaaaacaatacattccctcaaaatattcccccatccaaacacactctaag 2125854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35470189 - 35470119
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||||    
T  35470189 cccaaagtatttgaattccctcaaaacaatacattccctcaaaacatttcaccatctaaacacactctaag 35470119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 14982344 - 14982277
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14982344 aaagtagttaaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactctaag 14982277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 31473914 - 31473847
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||| |||||||||||||||||||    
T  31473914 caaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaa 31473847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 1539706 - 1539649
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaa 60  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  1539706 caaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaa 1539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 15660277 - 15660346
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  15660277 caaagtagttgaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactctaagg 15660346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 857333 - 857401
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  857333 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactctaag 857401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 10128068 - 10128139
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||| ||||||||||| |||||| ||||||| ||||||||||||| ||||||||| |||||||||||||    
T  10128068 caaagtagttgaattccctcaaaacattacattctctcaaaacattcccccatccaaatacactctaagggt 10128139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 70
Target Start/End: Original strand, 49111414 - 49111473
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  49111414 ttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaa 49111473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 10633097 - 10633035
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacac 65  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||    
T  10633097 caaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacac 10633035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 4 - 70
Target Start/End: Complemental strand, 36455971 - 36455905
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||| ||||||||||| |||||| || |||||||||||||||||| |||||||||||||||||||    
T  36455971 aaagtagttgaattccctcaaaacattagattccctcaaaacattcccccatccaaacacactctaa 36455905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 7352906 - 7352971
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||| | |||||||||||||||||    
T  7352906 caaagtagttgaattccctcaaaacattacattccctcaaaacatttccccatccaaacacactct 7352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 67 - 163
Target Start/End: Complemental strand, 31861678 - 31861581
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgtt-aaattataaccgtacaattttcaatgcaa 163  Q
    ||||| ||||||||||||||||| | | | | ||||||||||||||||||| |||| |||||| |||| |||||||||||| ||||||| ||||||||    
T  31861678 ctaagagtattgtttaaggaatccataaaaagaaattatgtcttgaaaatataagtcaaacacttgttaaaattataaccggacaatttccaatgcaa 31861581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 4441394 - 4441338
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactc 67  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  4441394 ttgaattccctcaaaacattacattccctcaaaacattccaccatccaaacacactc 4441338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 36456021 - 36456085
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||| ||| |||| | |||||||||||||||||||||||||||||||||||||||    
T  36456021 aaagtagttgaatttcctcaaaatattacattccctcaaaacattcctccatccaaacacactct 36456085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 5715809 - 5715738
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||||||||| ||| |||||| ||||||  |||||||||||||  ||||||||||||||||||||||    
T  5715809 caaagtatttgaattacctcaaaacattacattatctcaaaacattccctcatccaaacacactctaagggt 5715738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 16516236 - 16516169
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||| |||||| | |||||| |||||||| |||||||||||| |||||||||||||||||||    
T  16516236 caaagtatttaaattccttcaaaacattacattccgtcaaaacattcccccatccaaacacactctaa 16516169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 63
Target Start/End: Complemental strand, 28845935 - 28845876
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacac 63  Q
    |||||| |||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  28845935 aaagtagttgaattccctcgaaacattacattccctcaaaacattcctccatccaaacac 28845876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 28845965 - 28846032
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||| ||||||||||| |||||| || |||||||||||||||| | |||||||||||||||||||    
T  28845965 caaagtagttgaattccctcaaaacattatattccctcaaaacatttccccatccaaacacactctaa 28846032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 4896705 - 4896643
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||||||| |||||| |||||| |||||||| ||||| ||||||||||||||||||||||    
T  4896705 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactctaaggg 4896643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 1112670 - 1112605
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| |||||||||||  ||||| |||||| |||||||||||||| |||||||||||||||||    
T  1112670 caaagtagttgaattccctcgaaacattacatttcctcaaaacattcccccatccaaacacactct 1112605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 7352869 - 7352808
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||| | |||||| ||||||||||||||||||||| ||||||||||||||| |||||    
T  7352869 ttgaattccatcaaaacattacattccctcaaaacattcccccatccaaacacactttaagg 7352808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 11348339 - 11348400
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||||| |||||| |||||||||| |||||||||| ||||||||| |||||||||||    
T  11348339 ttgaattccctcaaaacattacattcccttaaaacattcccccatccaaatacactctaagg 11348400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 31742878 - 31742923
Alignment:
Q  23 aaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  31742878 aaaacattacattccctcaaaacattcctccatccaaacacactct 31742923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 41498592 - 41498649
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||| | |||||| ||||||||||||||| |||||||||||||||||||||||    
T  41498592 ttgaattccttcaaaacattacattccctcaaaatattcctccatccaaacacactct 41498649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 11041032 - 11040965
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||| |||||||| || |||||| ||||||||||||||| ||||| ||||||||||||||||||||    
T  11041032 caaagtagttgaattctctcaaaacattacattccctcaaaatattcc-ccatccaaacacactctaag 11040965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 6 - 77
Target Start/End: Original strand, 1107149 - 1107220
Alignment:
Q  6 agtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    |||| ||||||||||| |||||| || |||||||||||| ||||| ||||||||| ||||||||| ||||||    
T  1107149 agtagttgaattccctcaaaacattatattccctcaaaatattcccccatccaaatacactctaaaggtatt 1107220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 97 - 163
Target Start/End: Original strand, 2168473 - 2168540
Alignment:
Q  97 ataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    |||||||||||| ||||||||||||| |||||| ||||||| |  |||||||||||||||||||||||    
T  2168473 ataaattatgtcctgaaaatacaagtcaaacacttgttaaagtcgtaaccgtacaattttcaatgcaa 2168540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 4896726 - 4896789
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||| ||||||||||| |||||| ||||||||||||||| ||| | |||||||||||||||    
T  4896726 caaagtagttgaattccctcaaaacattacattccctcaaaatatttccccatccaaacacact 4896789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 65 - 163
Target Start/End: Complemental strand, 25231635 - 25231536
Alignment:
Q  65 ctctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgtt-aaattataaccgtacaattttcaatgcaa 163  Q
    ||||||||| ||||||||||||||| | | | | ||||||||||||||||||| |||| ||| |  |||| || ||||||||||||||||| ||||||||    
T  25231635 ctctaagggcattgtttaaggaatccataaaaagaaattatgtcttgaaaatataagtcaaatatttgttgaagttataaccgtacaatttccaatgcaa 25231536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 70
Target Start/End: Original strand, 55266870 - 55266936
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||| ||||||||||| |||| | || ||| ||||||||||||| ||||||||||||||||||||    
T  55266870 aaagtagttgaattccctcaaaatattatatttcctcaaaacattcatccatccaaacacactctaa 55266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 37624859 - 37624914
Alignment:
Q  109 ttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||    
T  37624859 ttgaaaatataagtcaaacacttgttaaagttataaccgtacaattttcaatgcaa 37624914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 42542981 - 42543024
Alignment:
Q  23 aaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||| ||||||||||||||||||||| |||||||||||||||    
T  42542981 aaaacattacattccctcaaaacattccaccatccaaacacact 42543024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 41621902 - 41621996
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatg 160  Q
    ||||||| ||||||||||||| | | | | | |||||||||||||||||||||| | || ||| ||||||| | |||| ||||||||||||||||    
T  41621902 ctaagggcattgtttaaggaacccacaaaaagaaattatgtcttgaaaatacaaatcaatcacttgttaaagtcataatcgtacaattttcaatg 41621996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 1112716 - 1112785
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| |||||||||||  ||||| ||||||  |||||||||| || ||||||||||| |||||||||    
T  1112716 caaagtagttgaattccctcgaaacattacatttgctcaaaacatccccccatccaaacaaactctaagg 1112785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 3121080 - 3121145
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||||||||||||||| |||| || ||  |||| || ||||||||||||||||||||||||||    
T  3121080 aaattatgtcttgaaaatataagtcaatcatttgttgaagttataaccgtacaattttcaatgcaa 3121145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 9093676 - 9093611
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||| || |||||||||| |||| |||||| |||| || ||||||||||||||||||||||||||    
T  9093676 aaattttgccttgaaaatataagtcaaacacttgtttaagttataaccgtacaattttcaatgcaa 9093611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 15660240 - 15660183
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||| |||||| |||||||| ||||| | |||||||||||||||    
T  15660240 ttgaattccctcaaaacattacattacctcaaaatattcccctatccaaacacactct 15660183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 26251015 - 26251052
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||||||| |||||||||||||||||||    
T  26251015 attccctcaaaacattcccccatccaaacacactctaa 26251052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 26876206 - 26876113
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaat 159  Q
    ||||||| ||||||||||||| | ||| | | |||||||| ||||||||||||||| |||||| | ||||| | |||||| |||||||| ||||    
T  26876206 ctaagggaattgtttaaggaacccaaaaaaagaaattatggcttgaaaatacaagtcaaacacttcttaaagtcataaccctacaatttccaat 26876113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 35808712 - 35808777
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    ||||||| ||||||||||| |||| ||||||  ||| || ||||||||||||||||||||||||||    
T  35808712 aaattatatcttgaaaatataagtcaaacactagttgaagttataaccgtacaattttcaatgcaa 35808777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 159
Target Start/End: Original strand, 41735448 - 41735509
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaat 159  Q
    |||||||||||||||||||||||| |||||| ||||||| | |||| |||||||||| ||||    
T  41735448 aaattatgtcttgaaaatacaagtcaaacacttgttaaagtcataatcgtacaatttccaat 41735509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 42844608 - 42844543
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||| | |||| | ||||||||||||||||||||| ||||| | |||||||||    
T  42844608 caaagtagttgaattccttcaaaatattacattccctcaaaacattcccccatctatacacactct 42844543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Complemental strand, 42775658 - 42775618
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  42775658 attccctcaaaacattcccccatccaaacacactttaaggg 42775618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 42776701 - 42776637
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||  || |||||| |||||  ||| ||||||||| ||||||||||||||||||    
T  42776701 aaagtatttgaatttactcaaaacattacataacctaaaaacattcttccatccaaacacactct 42776637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 467916 - 467962
Alignment:
Q  23 aaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||| |||||||| ||||||||||| ||||||||||||||||||||    
T  467916 aaaacattacattccatcaaaacattc-tccatccaaacacactctaa 467962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 68
Target Start/End: Original strand, 21012596 - 21012631
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||| ||||||||||||||||||    
T  21012596 attccctcaaaacattcgtccatccaaacacactct 21012631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 31742833 - 31742778
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||| |||||| |||| | ||| |||| |||||||||||||||||||||    
T  31742833 ttgaattccctcaaaacattacactaccttaaaatattcctccatccaaacacact 31742778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 62
Target Start/End: Original strand, 9451141 - 9451199
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaaca 62  Q
    |||||||||||| || || |||||| |||||| ||| ||||||||||| ||||||||||    
T  9451141 aaagtatttgaactctctcaaaacattacattaccttaaaacattccttcatccaaaca 9451199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 29091202 - 29091164
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctca 41  Q
    ||||||||||||||||||| |||||| ||||||||||||    
T  29091202 caaagtatttgaattccctcaaaacattacattccctca 29091164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 53760810 - 53760848
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  53760810 attccctcaaaacattcccccattcaaacacactctaag 53760848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 56339186 - 56339149
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  56339186 attccctcaaaacattccatcatccaaacacactctaa 56339149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 73
Target Start/End: Complemental strand, 32724961 - 32724925
Alignment:
Q  37 cctcaaaacattcctccatccaaacacactctaaggg 73  Q
    |||||||||||||| |||| |||||||||||||||||    
T  32724961 cctcaaaacattcccccattcaaacacactctaaggg 32724925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 41139537 - 41139475
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||| ||| |||||| |||||| ||||||| | |||| |||||||||||||||||    
T  41139537 aaagtatttgaatttcctcaaaacattacattacctcaaagc-ttcc-ccatccaaacacactct 41139475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 42844645 - 42844705
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||| |||||| |||||| |||||| |||||||| ||| | ||||||||||||||| ||||    
T  42844645 ttgatttccctcaaaacattacattacctcaaaatatttccccatccaaacacactataag 42844705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 47108353 - 47108317
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactcta 69  Q
    ||||||||||||||||||  |||||||||||||||||    
T  47108353 attccctcaaaacattccctcatccaaacacactcta 47108317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 23460038 - 23460123
Alignment:
Q  165 agtgactgctcaaattctactaatagagatgaatc--cacagtttaagtcatctcaaaatttataacgcaataatcctatgcttct 248  Q
    |||||||||||||||||||||||||||||||||||  |||||||||| ||||||| ||||||||||| ||||||||||||| ||||    
T  23460038 agtgactgctcaaattctactaatagagatgaatccacacagtttaattcatctcgaaatttataacacaataatcctatggttct 23460123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 26501087 - 26501152
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  26501087 caaagtatttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 26501152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 15034753 - 15034822
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  15034753 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactctaagg 15034822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 15034723 - 15034659
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  15034723 aaagtagttgaattccctcaaaacattacattccctcaaaacattcctccatccaaacacactct 15034659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 24273228 - 24273296
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||||||||||| | |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  24273228 caaagtatttgaattccctcataacattacattccctcaaaacattcccccatccaaacacactctaag 24273296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 47165221 - 47165293
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtat 76  Q
    |||||||||||||||||| |||||| |||||| |||||||||||| ||||||||||||||||||||| |||||    
T  47165221 aaagtatttgaattccctcaaaacattacatttcctcaaaacatttctccatccaaacacactctaaaggtat 47165293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 34756492 - 34756422
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||| |||||||||    
T  34756492 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacactctctaaggg 34756422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 76
Target Start/End: Complemental strand, 8224833 - 8224760
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtat 76  Q
    |||||||||| |||||||| |||||| |||||||||||||||||||||  |||||||||||||||| |||||||    
T  8224833 caaagtatttcaattccctcaaaacattacattccctcaaaacattccctcatccaaacacactcttagggtat 8224760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 23536132 - 23536067
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||||||||||    
T  23536132 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactct 23536067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 32287941 - 32288006
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||| ||| |||||| |||||||||||||||| ||||||||||||||||||||||    
T  32287941 caaagtatttgaatttcctcaaaacattacattccctcaaaactttcctccatccaaacacactct 32288006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 6470694 - 6470761
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||| ||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||||||    
T  6470694 caaagaatttgaattccctcaaaacattacattctctcaaaacattccgccatccaaacacactctaa 6470761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 946441 - 946373
Alignment:
Q  2 ccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||| |||||||| ||||||||||||||||||||| |||| || |||||||||||||||||||    
T  946441 ccaaagtatttaaattccctcaaaacaatacattccctcaaagcatttct-catccaaacacactctaag 946373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 4038140 - 4038075
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||||||    
T  4038140 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccacccaaacacactct 4038075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 30190238 - 30190299
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||| ||| |||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  30190238 ttgaattacctcaaaacattacattccctcaaaacattcccccatccaaacacactctaagg 30190299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 65
Target Start/End: Complemental strand, 51847916 - 51847855
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacac 65  Q
    |||||||||||||| | |||||||| |||||| |||||||||||||||||||||||||||||    
T  51847916 aaagtatttgaatttctttaaaacattacattacctcaaaacattcctccatccaaacacac 51847855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 32647368 - 32647300
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactcta 69  Q
    ||||||||||||||||| ||| ||||||||||||| | ||||||||||||||| |||||| ||||||||    
T  32647368 cccaaagtatttgaatttcctcaaaacaatacatttcttcaaaacattcctccgtccaaatacactcta 32647300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 4038170 - 4038237
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||| ||||||||||| |||||| ||| ||||||||||| ||||| ||||||||||||||||||||    
T  4038170 aaagtagttgaattccctcaaaacattactttccctcaaaatattcccccatccaaacacactctaag 4038237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 23459474 - 23459533
Alignment:
Q  107 tcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaaga 165  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||    
T  23459474 tcttgaaaatacaagtaaaacacatgttaaagttataacggtacaattttcaatgcaaga 23459533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 50005181 - 50005244
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    ||||||||||| |||||| |||||| |||||||| ||||||||||||||||||||| |||||||    
T  50005181 ttgaattccctcaaaacattacattacctcaaaatattcctccatccaaacacactataagggt 50005244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 27935579 - 27935649
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||| ||||||| ||| |||||| ||||||||||||||| ||| ||||||||||||||||||| ||||    
T  27935579 caaagtagttgaatttcctcaaaacattacattccctcaaaatatttctccatccaaacacactcttaggg 27935649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 45565451 - 45565390
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||| ||||||    
T  45565451 ttgaattccctcaaaacattacattctctcaaaacattcccccatccaaacacaccctaagg 45565390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15467969 - 15468009
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctca 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  15467969 cccaaagtatttgaattcccttaaaacaatacattccctca 15468009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 27804360 - 27804424
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||| ||||||||| |  ||||| |||||| ||||||||||||||||||||||||||||||||    
T  27804360 aaagtagttgaattccttctaaacattacatttcctcaaaacattcctccatccaaacacactct 27804424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 44410368 - 44410308
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||| ||||||||| ||||||||||||||||||||  ||||||||| ||||||||||    
T  44410368 ttgaattcgcttaaaacattacattccctcaaaacattctcccatccaaatacactctaag 44410308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Original strand, 51049809 - 51049880
Alignment:
Q  66 tctaagggtattgtttaaggaatcta-aatagataaattatgtcttgaaaatacaagtgaaacacatgttaaa 137  Q
    ||||||||||||||||||||||| || || ||| |||||||||||||||||||||||| |||||| |||||||    
T  51049809 tctaagggtattgtttaaggaatttagaaaaga-aaattatgtcttgaaaatacaagttaaacacttgttaaa 51049880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 43622986 - 43623057
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggt 74  Q
    |||||||||| ||||  || |||||| |||||||| |||||||||||| ||||||||||||||||| |||||    
T  43622986 caaagtatttaaattttctcaaaacattacattccatcaaaacattcccccatccaaacacactcttagggt 43623057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 37036957 - 37037019
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacac 65  Q
    |||| |||||||||||||| |||||| ||||||| |||||||||||||  |||||||||||||    
T  37036957 caaaatatttgaattccctcaaaacattacattcactcaaaacattccctcatccaaacacac 37037019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 64
Target Start/End: Complemental strand, 27804322 - 27804269
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    ||||||||||| |||| | ||||||||||||||||||||| |||||||||||||    
T  27804322 ttgaattccctcaaaatattacattccctcaaaacattcccccatccaaacaca 27804269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 99 - 158
Target Start/End: Complemental strand, 1795918 - 1795858
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaa 158  Q
    |||||| ||||||||||||||||| |||||||| ||||| | |||||||||||||||||||    
T  1795918 aaattaagtcttgaaaatacaagtcaaacacatcttaaagtcataaccgtacaattttcaa 1795858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 69
Target Start/End: Complemental strand, 32652261 - 32652205
Alignment:
Q  13 gaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactcta 69  Q
    ||||| ||| ||||||||||||| |||||||||||| ||||||||||| ||||||||    
T  32652261 gaatttcctcaaaacaatacatttcctcaaaacatttctccatccaaatacactcta 32652205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 40264132 - 40264192
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    ||||||||||| |||||| |||||| |||||||| ||||| ||||||||||||||| ||||    
T  40264132 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaaacacactataag 40264192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 72
Target Start/End: Complemental strand, 32572975 - 32572936
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagg 72  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  32572975 attccctcaaaacattcccccatccaaacacactctaagg 32572936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 29446807 - 29446745
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||||||| |||||| |||||||| |||||||||||| || | |||||||||||| ||||    
T  29446807 ttgaattccctcaaaacattacattccttcaaaacattcccccgttcaaacacactcttaggg 29446745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 36563873 - 36563935
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatg 160  Q
    |||||||| |||||||||| |||| |||||| ||||||| ||||| |||||||||||||||||    
T  36563873 aaattatgccttgaaaatataagtcaaacacttgttaaagttatatccgtacaattttcaatg 36563935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 38
Target Start/End: Complemental strand, 47820277 - 47820243
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccc 38  Q
    |||||||||||||||||||||||||||||||||||    
T  47820277 aaagtatttgaattcccttaaaacaatacattccc 47820243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 3831477 - 3831412
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaatgcaa 163  Q
    |||||||||||||||||||||| |  ||||||||||||| | ||||| ||||||||| ||||||||    
T  3831477 aaattatgtcttgaaaatacaaattcaacacatgttaaagtcataactgtacaatttccaatgcaa 3831412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 38277480 - 38277415
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||| ||||||||| | |||||| ||||||||||||||| ||||   ||||||||||||||||    
T  38277480 caaagtagttgaattccttcaaaacattacattccctcaaaatattctctcatccaaacacactct 38277415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 38277517 - 38277577
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagg 72  Q
    ||||||||||| |||||| |||||| |||||||| ||||| ||||||||||||||| |||||    
T  38277517 ttgaattccctcaaaacattacattacctcaaaatattcc-ccatccaaacacactataagg 38277577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 136
Target Start/End: Complemental strand, 42410323 - 42410254
Alignment:
Q  67 ctaagggtattgtttaaggaatctaaatagataaattatgtcttgaaaatacaagtgaaacacatgttaa 136  Q
    ||||||| ||||||||||||| | | | | | |||||||||||||||||||||||| |||||| ||||||    
T  42410323 ctaagggcattgtttaaggaacccacaaaaagaaattatgtcttgaaaatacaagtcaaacacttgttaa 42410254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 49659281 - 49659217
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||| ||||||||   |||| ||||||||||||| ||||||| |||||||||||||||||    
T  49659281 caaagtatttaaattccctcgtaacattacattccctcaatacattcc-ccatccaaacacactct 49659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 894801 - 894861
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaa-ttataaccgtacaattttcaa 158  Q
    |||||||||||||||| ||||||| |||||| ||||||| | |||| ||||||||||||||    
T  894801 aaattatgtcttgaaagtacaagtcaaacacttgttaaagtcataatcgtacaattttcaa 894861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 946975 - 946931
Alignment:
Q  6 agtatttgaattcccttaaaacaatacattccctcaaaacattcc 50  Q
    |||||||||||| ||| |||| |||||||||||||||||||||||    
T  946975 agtatttgaatttcctcaaaataatacattccctcaaaacattcc 946931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 67
Target Start/End: Original strand, 32573024 - 32573080
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactc 67  Q
    ||||||||||| |||||| |||||| |||||||| ||||| |||||||| |||||||    
T  32573024 ttgaattccctcaaaacattacattacctcaaaatattcccccatccaatcacactc 32573080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 37448409 - 37448465
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaa 59  Q
    |||||||||| |||||||| |||||| ||||||| |||||||||||||  |||||||    
T  37448409 caaagtatttaaattccctcaaaacattacattctctcaaaacattccctcatccaa 37448465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 44570739 - 44570687
Alignment:
Q  7 gtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaa 59  Q
    ||||||||||||| | |||||| ||||||||||||||||||||  ||||||||    
T  44570739 gtatttgaattccttcaaaacattacattccctcaaaacattctcccatccaa 44570687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 45565500 - 45565540
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  45565500 attccctcaaaacattcttccatccaaacacactcttaggg 45565540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 48953622 - 48953574
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggtattgttt 81  Q
    ||||| |||||||||||| |||||||||||||||||||| | |||||||    
T  48953622 attccttcaaaacattcccccatccaaacacactctaagagaattgttt 48953574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 5474452 - 5474417
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||| |||||||||||||||||    
T  5474452 attccctcaaaacattcccccatccaaacacactct 5474417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 15245495 - 15245460
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||||||||||||| |||||||||||||||||    
T  15245495 attccctcaaaacattcccccatccaaacacactct 15245460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 28632601 - 28632656
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||||| || |||||| ||||||||||| |||||||||  ||||||||||||||    
T  28632601 ttgaattctctcaaaacattacattccctccaaacattccctcatccaaacacact 28632656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 28745854 - 28745799
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    ||||||||||| ||| || ||||||||||||||| ||||| ||||||||| |||||    
T  28745854 ttgaattccctcaaaccattacattccctcaaaatattcccccatccaaatacact 28745799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 33 - 72
Target Start/End: Original strand, 37214924 - 37214963
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagg 72  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  37214924 attccctcaaaacattctcccatccaaacacactctaagg 37214963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 71
Target Start/End: Original strand, 23536173 - 23536211
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  23536173 attccctcaaaacattcccccatccaaacacattctaag 23536211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 31166375 - 31166310
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||| |||||| ||||| | |||||| ||||||  |||||||||||||  ||||||||||||||||    
T  31166375 caaaatatttgcattccatcaaaacattacattatctcaaaacattccctcatccaaacacactct 31166310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 32128083 - 32128046
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  32128083 attccctcaaaacattcccccatctaaacacactctaa 32128046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 44410413 - 44410470
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||| |||||  |||||| |||||||| ||||| | |||||||||||||||    
T  44410413 ttgaattccctcaaaactttacattacctcaaaatattccccaatccaaacacactct 44410470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 50005136 - 50005079
Alignment:
Q  11 ttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    |||||||| || |||||| ||||||| ||||||| |||||  ||||||||||||||||    
T  50005136 ttgaattcgctcaaaacattacattctctcaaaatattccgtcatccaaacacactct 50005079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 36384955 - 36384915
Alignment:
Q  99 aaattatgtcttgaaaatacaagtgaaacacatgttaaatt 139  Q
    ||||||| |||||||||||||| | ||||||||||||||||    
T  36384955 aaattatatcttgaaaatacaatttaaacacatgttaaatt 36384915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 73
Target Start/End: Original strand, 41823180 - 41823220
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||| |||||||||||| ||||||||||||||||| ||||    
T  41823180 attccttcaaaacattcccccatccaaacacactcttaggg 41823220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 42062 - 41995
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaa 70  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||    
T  42062 caaagtagttgaattccctcaaaacattacattccctcaaaacattcctccattcaaacacactctaa 41995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 42079 - 42137
Alignment:
Q  10 tttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||| || |||||| |||||||||||||||| |||| |||||||||||||||||    
T  42079 tttgaattctctcaaaacattacattccctcaaaacgttcccccatccaaacacactct 42137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 499 - 569
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| ||||||    
T  499 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactataaggg 569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 468 - 405
Alignment:
Q  5 aagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||| ||||||||||| |||||| ||  ||||||||||| ||||| |||||||||||||||||    
T  468 aagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 2094 - 2024
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaaggg 73  Q
    ||||||| ||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||| ||||||    
T  2094 caaagtagttgaattccctcaaaacattacattccctcaaaacattcccccatccaaacacactataaggg 2024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 2125 - 2188
Alignment:
Q  5 aagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||| ||||||||||| |||||| ||  ||||||||||| ||||| |||||||||||||||||    
T  2125 aagtagttgaattccctcaaaacattattttccctcaaaatattcccccatccaaacacactct 2188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 4140 - 4075
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactct 68  Q
    ||||||||||||||||||| |||||| ||||||| ||||||||||||||  |||||||||||||||    
T  4140 caaagtatttgaattccctcaaaacattacattctctcaaaacattcctttatccaaacacactct 4075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 10951 - 10887
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactc 67  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||||| ||||| |||||||||||    
T  10951 caaagtatttgaattccctcaaaacattacattcccttaaaacattcttccattcaaacacactc 10887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 83007 - 82945
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||| ||||||||||| |||||| ||||||||||||||||||||  |||||||||||||||    
T  83007 aaagtagttgaattccctcaaaacattacattccctcaaaacattcacccatccaaacacact 82945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 4504 - 4580
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    |||||| |||||||||| ||| |||||| || ||||||||||||||||||  ||||||||||||||| | |||||||    
T  4504 cccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactcaaggggtatt 4580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 5148 - 5224
Alignment:
Q  1 cccaaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    |||||| |||||||||| ||| |||||| || ||||||||||||||||||  ||||||||||||||| | |||||||    
T  5148 cccaaaatatttgaatttcctcaaaacattatattccctcaaaacattccctcatccaaacacactcaaggggtatt 5224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 71
Target Start/End: Complemental strand, 2927 - 2864
Alignment:
Q  8 tatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacactctaag 71  Q
    |||||||||||||| |||||| ||||||| ||| ||||||||| ||||| ||||||||||||||    
T  2927 tatttgaattccctcaaaacattacattctctcgaaacattcccccatctaaacacactctaag 2864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 19793 - 19855
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||||||||||||||  ||||||||| ||||||||||||||||| ||| |||||||||||||||    
T  19793 caaagtatttgaattttcttaaaacattacattccctcaaaaca-tcccccatccaaacacact 19855  T

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Target: scaffold0129; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 19262 - 19200
Alignment:
Q  3 caaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacacact 66  Q
    |||| |||||||||||| | |||||| ||||||||||||||| | ||| |||||||||||||||    
T  19262 caaaatatttgaattcc-tcaaaacattacattccctcaaaatactcccccatccaaacacact 19200  T

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Target: scaffold0240 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 77
Target Start/End: Original strand, 17605 - 17649
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaagggtatt 77  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  17605 attccctcaaaacattcccccatccaaacacactctaagtgtatt 17649  T

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Target: scaffold0039 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 109084 - 109047
Alignment:
Q  33 attccctcaaaacattcctccatccaaacacactctaa 70  Q
    |||||||||||||||||| |||||||||||||||||||    
T  109084 attccctcaaaacattcccccatccaaacacactctaa 109047  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 56369 - 56429
Alignment:
Q  4 aaagtatttgaattcccttaaaacaatacattccctcaaaacattcctccatccaaacaca 64  Q
    |||||| ||||||||||| |||||| ||| ||||||||||| |||||  ||||||||||||    
T  56369 aaagtagttgaattccctcaaaacattactttccctcaaaatattccctcatccaaacaca 56429  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 137
Target Start/End: Complemental strand, 171680 - 171646
Alignment:
Q  103 tatgtcttgaaaatacaagtgaaacacatgttaaa 137  Q
    |||||||||||||||||||| ||||||||||||||    
T  171680 tatgtcttgaaaatacaagtcaaacacatgttaaa 171646  T

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