View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10041_high_20 (Length: 275)
Name: NF10041_high_20
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10041_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 225
Target Start/End: Original strand, 4314686 - 4314895
Alignment:
| Q |
16 |
aaaattagagtgccaaagcagaaaatagtttaaaatttaaacttagagaagaaattaatttaagaaactgcaccctaaattaaactatgctacactagca |
115 |
Q |
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| T |
4314686 |
aaaattagagtgccaaagcagaaaatagtttaaaatttaaacttagagaagaaattaatttaagaaactgcaccctaaattaaactatgctacactagca |
4314785 |
T |
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| Q |
116 |
ctcactagataacatgtctaaactctggcccacaatgatgatgataattgatgaaatcatctccaccgttagatgaaacgccgaaaattgaactgtgact |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4314786 |
ctcactagataacatgtctaaactctggcccacaatgatgatgataattgatgaaatcatctccaccgttagatgaaacgccgaaaattgaactgtgact |
4314885 |
T |
|
| Q |
216 |
cagaagctgt |
225 |
Q |
| |
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|||||||||| |
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| T |
4314886 |
cagaagctgt |
4314895 |
T |
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