View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10041_high_29 (Length: 246)

Name: NF10041_high_29
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10041_high_29
NF10041_high_29
[»] chr3 (49 HSPs)
chr3 (21-239)||(36750050-36750268)
chr3 (13-239)||(52492104-52492330)
chr3 (15-164)||(36750337-36750486)
chr3 (17-172)||(38922744-38922900)
chr3 (14-164)||(32490094-32490245)
chr3 (15-164)||(41755498-41755648)
chr3 (16-164)||(19132711-19132860)
chr3 (16-164)||(38923564-38923713)
chr3 (17-164)||(45242067-45242215)
chr3 (15-164)||(41756331-41756481)
chr3 (15-164)||(44687062-44687212)
chr3 (18-164)||(3970994-3971141)
chr3 (16-134)||(19132563-19132681)
chr3 (15-164)||(44686254-44686403)
chr3 (16-164)||(45242886-45243035)
chr3 (18-164)||(3998740-3998887)
chr3 (15-164)||(3971801-3971951)
chr3 (15-164)||(3997927-3998077)
chr3 (16-164)||(52491891-52492035)
chr3 (16-134)||(32489946-32490064)
chr3 (40-164)||(45500497-45500620)
chr3 (43-155)||(8436574-8436685)
chr3 (40-155)||(8440119-8440233)
chr3 (16-63)||(31556217-31556264)
chr3 (14-65)||(37105076-37105127)
chr3 (15-65)||(14667296-14667345)
chr3 (75-164)||(8653622-8653709)
chr3 (16-65)||(49757181-49757230)
chr3 (17-65)||(42145277-42145325)
chr3 (76-147)||(8427276-8427346)
chr3 (16-62)||(17226968-17227014)
chr3 (15-65)||(49756274-49756324)
chr3 (99-164)||(11267588-11267651)
chr3 (16-63)||(21811879-21811926)
chr3 (76-147)||(25025234-25025304)
chr3 (16-63)||(31556188-31556235)
chr3 (18-65)||(32994927-32994974)
chr3 (192-239)||(41756194-41756241)
chr3 (14-65)||(46719659-46719710)
chr3 (76-147)||(47737629-47737699)
chr3 (27-65)||(37104363-37104401)
chr3 (16-50)||(38923438-38923472)
chr3 (16-50)||(45242307-45242341)
chr3 (16-57)||(17227955-17227996)
chr3 (15-64)||(43638078-43638127)
chr3 (15-64)||(49749124-49749173)
chr3 (119-164)||(50305167-50305212)
chr3 (23-63)||(38337478-38337518)
chr3 (16-64)||(39901846-39901894)
[»] chr7 (43 HSPs)
chr7 (16-239)||(38072116-38072339)
chr7 (18-239)||(7677635-7677855)
chr7 (20-239)||(4261209-4261428)
chr7 (16-164)||(17145622-17145772)
chr7 (15-164)||(38071897-38072047)
chr7 (16-164)||(668179-668328)
chr7 (15-164)||(37864206-37864356)
chr7 (16-164)||(669002-669151)
chr7 (15-164)||(4261495-4261645)
chr7 (15-133)||(38778853-38778971)
chr7 (16-130)||(38779498-38779611)
chr7 (20-164)||(7677421-7677566)
chr7 (15-164)||(41194512-41194659)
chr7 (16-134)||(17145802-17145920)
chr7 (16-97)||(37468972-37469053)
chr7 (40-164)||(32859257-32859380)
chr7 (15-73)||(37468909-37468967)
chr7 (16-116)||(24322299-24322399)
chr7 (14-114)||(44909309-44909409)
chr7 (15-65)||(29006346-29006396)
chr7 (23-64)||(20890206-20890247)
chr7 (30-134)||(42607095-42607198)
chr7 (15-63)||(45887981-45888029)
chr7 (15-63)||(47331954-47332002)
chr7 (15-65)||(29007198-29007248)
chr7 (15-65)||(41224842-41224892)
chr7 (30-107)||(40257759-40257836)
chr7 (15-63)||(4985395-4985443)
chr7 (15-63)||(4989493-4989541)
chr7 (16-108)||(27599211-27599303)
chr7 (13-65)||(29314578-29314630)
chr7 (23-63)||(45887286-45887326)
chr7 (76-147)||(27855625-27855695)
chr7 (15-118)||(29315257-29315360)
chr7 (101-156)||(41195275-41195329)
chr7 (16-63)||(41533896-41533943)
chr7 (16-118)||(27600041-27600143)
chr7 (17-50)||(668420-668453)
chr7 (16-65)||(44896046-44896095)
chr7 (21-62)||(48259820-48259861)
chr7 (15-63)||(24321424-24321472)
chr7 (23-63)||(24322429-24322469)
chr7 (30-134)||(40257594-40257697)
[»] chr8 (36 HSPs)
chr8 (16-239)||(5035102-5035324)
chr8 (14-164)||(34992163-34992314)
chr8 (15-162)||(41859309-41859457)
chr8 (23-164)||(37639718-37639860)
chr8 (16-164)||(32536708-32536857)
chr8 (15-134)||(5034897-5035016)
chr8 (16-164)||(38023624-38023773)
chr8 (16-134)||(34992015-34992133)
chr8 (15-164)||(41859995-41860145)
chr8 (15-164)||(32537387-32537534)
chr8 (102-164)||(38024430-38024492)
chr8 (15-64)||(25876520-25876569)
chr8 (24-88)||(37640538-37640601)
chr8 (15-64)||(61453-61502)
chr8 (16-65)||(27918046-27918095)
chr8 (16-64)||(1365829-1365877)
chr8 (15-53)||(44098432-44098470)
chr8 (99-156)||(10501822-10501877)
chr8 (16-65)||(41092172-41092221)
chr8 (16-64)||(39254787-39254835)
chr8 (76-147)||(7818534-7818604)
chr8 (76-147)||(10806008-10806078)
chr8 (192-239)||(37639929-37639976)
chr8 (76-147)||(39852759-39852829)
chr8 (18-65)||(41348146-41348193)
chr8 (16-63)||(43924490-43924537)
chr8 (15-117)||(30272903-30273005)
chr8 (76-146)||(38778752-38778821)
chr8 (23-64)||(4364046-4364087)
chr8 (15-64)||(7424562-7424611)
chr8 (16-117)||(36936644-36936745)
chr8 (15-64)||(39255752-39255801)
chr8 (15-64)||(44751607-44751656)
chr8 (16-64)||(62240-62288)
chr8 (16-64)||(36936418-36936466)
chr8 (16-64)||(42345166-42345214)
[»] scaffold0041 (2 HSPs)
scaffold0041 (16-229)||(27221-27433)
scaffold0041 (16-93)||(27546-27623)
[»] chr5 (34 HSPs)
chr5 (15-172)||(33001931-33002087)
chr5 (15-164)||(33002715-33002865)
chr5 (16-164)||(686417-686565)
chr5 (16-164)||(15183916-15184065)
chr5 (15-162)||(8204119-8204267)
chr5 (15-164)||(8040194-8040344)
chr5 (16-164)||(15183088-15183238)
chr5 (15-144)||(12190078-12190207)
chr5 (15-134)||(36626560-36626679)
chr5 (17-164)||(687247-687395)
chr5 (15-134)||(8040374-8040493)
chr5 (177-239)||(33002584-33002646)
chr5 (15-116)||(33283971-33284072)
chr5 (16-63)||(39950404-39950451)
chr5 (20-116)||(33283169-33283265)
chr5 (16-63)||(2319266-2319313)
chr5 (22-65)||(4607470-4607513)
chr5 (16-118)||(16970979-16971081)
chr5 (16-65)||(4608589-4608638)
chr5 (15-64)||(13654932-13654981)
chr5 (15-63)||(2319968-2320016)
chr5 (15-63)||(26268343-26268391)
chr5 (43-95)||(33685772-33685824)
chr5 (16-52)||(39950444-39950480)
chr5 (15-66)||(13404701-13404752)
chr5 (16-63)||(26269022-26269069)
chr5 (16-50)||(686667-686701)
chr5 (15-65)||(2458353-2458403)
chr5 (15-64)||(8226641-8226690)
chr5 (16-65)||(31148444-31148493)
chr5 (21-62)||(39167442-39167483)
chr5 (75-155)||(42518811-42518891)
chr5 (16-64)||(26688166-26688214)
chr5 (16-64)||(26957897-26957945)
[»] chr4 (71 HSPs)
chr4 (16-172)||(39523164-39523319)
chr4 (15-164)||(11417686-11417836)
chr4 (15-164)||(26611182-26611332)
chr4 (15-164)||(10424958-10425108)
chr4 (15-164)||(21166274-21166424)
chr4 (15-164)||(29651231-29651381)
chr4 (16-164)||(10424123-10424272)
chr4 (20-172)||(38143628-38143781)
chr4 (16-164)||(45230365-45230514)
chr4 (16-164)||(36865616-36865765)
chr4 (16-134)||(11417867-11417985)
chr4 (21-164)||(26610350-26610495)
chr4 (16-164)||(38694850-38695002)
chr4 (16-164)||(45235859-45236008)
chr4 (14-134)||(31836390-31836510)
chr4 (17-164)||(29650416-29650564)
chr4 (16-134)||(38694702-38694820)
chr4 (16-164)||(21165447-21165596)
chr4 (15-134)||(9939301-9939420)
chr4 (15-164)||(39522374-39522524)
chr4 (16-164)||(31835148-31835297)
chr4 (17-134)||(36864818-36864935)
chr4 (15-162)||(9939124-9939269)
chr4 (34-134)||(38143506-38143606)
chr4 (30-164)||(25970120-25970250)
chr4 (30-164)||(36451327-36451461)
chr4 (54-172)||(11806129-11806244)
chr4 (33-164)||(23383327-23383457)
chr4 (43-164)||(17648044-17648165)
chr4 (30-158)||(36450742-36450871)
chr4 (15-165)||(25970701-25970852)
chr4 (14-65)||(47377597-47377648)
chr4 (177-239)||(39522593-39522655)
chr4 (16-108)||(30808621-30808713)
chr4 (21-64)||(3847891-3847934)
chr4 (14-64)||(47198603-47198653)
chr4 (15-64)||(42544487-42544536)
chr4 (16-69)||(47376852-47376905)
chr4 (16-116)||(38014870-38014970)
chr4 (21-64)||(3848578-3848621)
chr4 (23-65)||(11680283-11680325)
chr4 (23-65)||(11688562-11688604)
chr4 (21-63)||(25370511-25370553)
chr4 (15-65)||(28684231-28684281)
chr4 (16-65)||(37275088-37275137)
chr4 (14-63)||(46765169-46765218)
chr4 (15-64)||(52757812-52757861)
chr4 (75-145)||(5825393-5825459)
chr4 (16-64)||(25371545-25371593)
chr4 (15-117)||(12589286-12589388)
chr4 (192-239)||(29651115-29651162)
chr4 (13-64)||(55159177-55159228)
chr4 (16-50)||(10424385-10424419)
chr4 (23-65)||(12590202-12590244)
chr4 (16-50)||(21166137-21166171)
chr4 (15-65)||(23425206-23425256)
chr4 (23-65)||(25655638-25655680)
chr4 (16-50)||(29650655-29650689)
chr4 (16-50)||(31836221-31836255)
chr4 (15-65)||(31910553-31910603)
chr4 (16-50)||(45235733-45235767)
chr4 (15-64)||(30478308-30478357)
chr4 (16-65)||(42545562-42545611)
chr4 (15-64)||(47199395-47199444)
chr4 (15-64)||(48013316-48013365)
chr4 (15-64)||(55160067-55160115)
chr4 (15-63)||(11681275-11681323)
chr4 (15-63)||(11689554-11689602)
chr4 (99-147)||(20822706-20822754)
chr4 (16-60)||(23865321-23865365)
chr4 (17-65)||(52758709-52758757)
[»] chr6 (30 HSPs)
chr6 (18-164)||(3542816-3542963)
chr6 (16-172)||(33480519-33480676)
chr6 (16-134)||(3542993-3543111)
chr6 (16-164)||(15083217-15083366)
chr6 (16-164)||(22579935-22580084)
chr6 (16-164)||(33018167-33018316)
chr6 (18-164)||(33479698-33479846)
chr6 (21-164)||(15082402-15082546)
chr6 (14-134)||(33018346-33018466)
chr6 (15-154)||(7193337-7193474)
chr6 (20-160)||(22587213-22587354)
chr6 (15-134)||(7193508-7193627)
chr6 (20-123)||(22582420-22582523)
chr6 (16-65)||(24125972-24126021)
chr6 (16-69)||(24126713-24126766)
chr6 (15-64)||(7159341-7159390)
chr6 (16-64)||(7531829-7531877)
chr6 (192-239)||(22580153-22580200)
chr6 (21-63)||(10607406-10607448)
chr6 (23-65)||(10608319-10608361)
chr6 (14-64)||(14337557-14337607)
chr6 (16-50)||(15082638-15082672)
chr6 (16-50)||(22580597-22580631)
chr6 (16-50)||(22587083-22587117)
chr6 (16-50)||(33479938-33479972)
chr6 (15-116)||(1035351-1035452)
chr6 (15-64)||(7532440-7532489)
chr6 (41-89)||(4311163-4311211)
chr6 (16-64)||(9574571-9574619)
chr6 (30-118)||(25067796-25067884)
[»] scaffold0311 (1 HSPs)
scaffold0311 (14-164)||(58-210)
[»] chr2 (26 HSPs)
chr2 (16-164)||(21471853-21472002)
chr2 (15-164)||(21471016-21471166)
chr2 (14-164)||(38834385-38834536)
chr2 (15-134)||(37547997-37548116)
chr2 (16-130)||(14573261-14573374)
chr2 (16-164)||(4479603-4479750)
chr2 (15-134)||(38834566-38834685)
chr2 (16-134)||(13134318-13134436)
chr2 (15-133)||(14573930-14574048)
chr2 (16-64)||(33433160-33433208)
chr2 (41-96)||(30486909-30486964)
chr2 (14-64)||(5276463-5276513)
chr2 (15-52)||(1164788-1164825)
chr2 (16-65)||(16426553-16426602)
chr2 (16-65)||(40992222-40992271)
chr2 (15-63)||(41984726-41984774)
chr2 (14-65)||(2650227-2650278)
chr2 (101-156)||(4478936-4478990)
chr2 (76-147)||(11256696-11256766)
chr2 (15-65)||(24727820-24727870)
chr2 (16-58)||(24741811-24741853)
chr2 (15-65)||(30545434-30545484)
chr2 (15-64)||(4478850-4478899)
chr2 (15-64)||(19521917-19521966)
chr2 (14-63)||(41043329-41043378)
chr2 (16-68)||(30544727-30544779)
[»] chr1 (53 HSPs)
chr1 (16-164)||(43737729-43737878)
chr1 (16-164)||(16270207-16270357)
chr1 (16-134)||(23440795-23440913)
chr1 (15-162)||(48972346-48972494)
chr1 (16-164)||(9947995-9948144)
chr1 (16-144)||(9948807-9948935)
chr1 (16-164)||(23440617-23440765)
chr1 (15-164)||(51974436-51974586)
chr1 (16-164)||(16271047-16271196)
chr1 (30-172)||(6075988-6076127)
chr1 (15-134)||(43737908-43738027)
chr1 (16-172)||(48971705-48971862)
chr1 (16-164)||(51975126-51975275)
chr1 (16-164)||(193850-193997)
chr1 (16-162)||(50826992-50827138)
chr1 (16-172)||(38930312-38930469)
chr1 (40-164)||(12925897-12926020)
chr1 (30-164)||(6076767-6076901)
chr1 (40-164)||(20794313-20794436)
chr1 (34-164)||(47334217-47334347)
chr1 (51-164)||(17050488-17050600)
chr1 (40-164)||(31390726-31390847)
chr1 (18-164)||(38931145-38931293)
chr1 (16-165)||(47334798-47334948)
chr1 (46-110)||(27888701-27888765)
chr1 (177-228)||(6076636-6076687)
chr1 (15-65)||(1012546-1012596)
chr1 (51-115)||(40649516-40649580)
chr1 (15-64)||(51987826-51987875)
chr1 (43-131)||(46133720-46133807)
chr1 (75-164)||(27418222-27418311)
chr1 (15-64)||(35616775-35616824)
chr1 (15-64)||(45064685-45064734)
chr1 (17-62)||(49611562-49611607)
chr1 (16-64)||(8560839-8560887)
chr1 (16-64)||(49610706-49610754)
chr1 (16-64)||(51988464-51988512)
chr1 (76-147)||(7219068-7219138)
chr1 (76-147)||(51247888-51247958)
chr1 (76-147)||(51248439-51248509)
chr1 (15-65)||(1013471-1013521)
chr1 (16-50)||(16270901-16270935)
chr1 (16-50)||(38930574-38930608)
chr1 (15-65)||(45065385-45065435)
chr1 (22-64)||(48870753-48870795)
chr1 (74-147)||(37725437-37725509)
chr1 (16-64)||(194701-194749)
chr1 (15-63)||(8561737-8561785)
chr1 (15-107)||(11032176-11032268)
chr1 (23-63)||(14924681-14924721)
chr1 (23-63)||(14925343-14925383)
chr1 (16-64)||(37874064-37874112)
chr1 (14-62)||(48869767-48869815)
[»] scaffold0332 (1 HSPs)
scaffold0332 (16-159)||(9162-9306)
[»] scaffold0700 (1 HSPs)
scaffold0700 (41-155)||(5344-5457)
[»] scaffold0155 (1 HSPs)
scaffold0155 (16-65)||(17339-17388)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 21 - 239
Target Start/End: Original strand, 36750050 - 36750268
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 120  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36750050 catttaatttgggaaaggagagttcttttccaccatggaaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 36750149  T
Q  121 ctagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccgaca 220  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  36750150 ctagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttccggca 36750249  T
Q  221 gcaaccatgatggtctgtg 239  Q
    ||||||||| |||| ||||    
T  36750250 gcaaccatggtggtgtgtg 36750268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 13 - 239
Target Start/End: Complemental strand, 52492330 - 52492104
Alignment:
Q  13 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactct 112  Q
    ||||||| |||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  52492330 ggaggtgtcatttaatttgggaaatgagagttcttttccaccatggaaaagttgttcatgtccattagattaaatgaggaatacattcttatcatactct 52492231  T
Q  113 ctcaaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagtt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52492230 ctcaaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagtt 52492131  T
Q  213 ttccgacagcaaccatgatggtctgtg 239  Q
    ||||| ||||||||||| |||| ||||    
T  52492130 ttccggcagcaaccatggtggtgtgtg 52492104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 36750486 - 36750337
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  36750486 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctct 36750387  T
Q  115 caaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  36750386 caaccactagattattttttatactatctttcacactctctctttcatgt 36750337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 17 - 172
Target Start/End: Original strand, 38922744 - 38922900
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 116  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||| || | |||| |||||||||||||||    
T  38922744 gtgccatttaatttgggaaaggagagttatttcctaccatgggaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctctca 38922843  T
Q  117 accactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 172  Q
    |||||||||||| ||||||| |||||||| ||| ||||||||||||||| |||||||    
T  38922844 accactagattatttttttatactatctttcacactctctctttcatgtcctcacac 38922900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 32490245 - 32490094
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 113  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  32490245 gaggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 32490146  T
Q  114 tcaaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||||| ||||| |||||||| ||| ||| |||||||||||    
T  32490145 tcaaccactagattatttttttatactatctttcacactccctctttcatgt 32490094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 41755498 - 41755648
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  41755498 aggtgtcatttaatttgggaaaggagagttttttcccaccatgagaaaattgatcatgttcattagattaaatgaggaacatatttctatcatactctct 41755597  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  41755598 caaccactatattatttttttatactatctttcacactctctctttcatgt 41755648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 19132860 - 19132711
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  19132860 ggtgccatttaatttgggaaaggaaagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcttatcatactctctc 19132761  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||| ||||||| ||||| | |||||| |||  ||||||||||||||    
T  19132760 aaccactggattatttttttatattatctttcacattctctctttcatgt 19132711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 38923713 - 38923564
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| | |||  ||||||||||||||    
T  38923713 ggtgccatttaatttgggaaatgagagttctttcccaccatggaaaagttgataatgttcattagattaaatgaggaacatatttctatcatactctctc 38923614  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  38923613 aaccactagattatttttttatactatctttcacactctctctttcatgt 38923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 45242067 - 45242215
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 116  Q
    |||||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||    
T  45242067 gtgccatttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 45242166  T
Q  117 accactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  45242167 accactagattatttttttatactatctttcacactctctctttcatgt 45242215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 41756481 - 41756331
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||| ||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  41756481 aggtgtcatttaagttaggaaaggagagttctttcccatcatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctct 41756382  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  41756381 caaccattagattatttttttatactatctttcacactctctctttcatgt 41756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 44687212 - 44687062
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||||||||||||| || ||| ||||||||| |||||||||||| ||||||||||||||||||||| | |||| |||||||||||||    
T  44687212 aggtgccatttaatttgggaaaggagaattcttttccaccatggaaaagttgatcatattcattagattaaatgaggaaaatattcctatcatactctct 44687113  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  44687112 caaccattagattatttttttatactatctttcacactctctctttcatgt 44687062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 3970994 - 3971141
Alignment:
Q  18 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 117  Q
    ||||||||||||||||||| |||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  3970994 tgccatttaatttgggaaatgagagttttttttcaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 3971093  T
Q  118 ccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||| ||||| ||||||| |||||||| ||| |||||||||||||||    
T  3971094 ccacttgattatttttttatactatctttcacactctctctttcatgt 3971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 19132563 - 19132681
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  19132563 ggtgccatttaatttgggaaaggagagttctttcctactatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 19132662  T
Q  116 aaccactagattatttttt 134  Q
    |||||||||||||||||||    
T  19132663 aaccactagattatttttt 19132681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 44686254 - 44686403
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  44686254 aggtgccatttaatttggaaaaggagagtttttttc-accatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 44686352  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  44686353 caaccactagattatttttttatactatctttcacactctctctttcatgt 44686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 45243035 - 45242886
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  45243035 ggtgccatttaatttgggaaagaagagttcttttccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 45242936  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| | |||||| ||| |||||||||||||||    
T  45242935 aaccactagattatttttttatattatctttcacactctctctttcatgt 45242886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 3998887 - 3998740
Alignment:
Q  18 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 117  Q
    ||||||||||||||||||| |||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  3998887 tgccatttaatttgggaaatgagagttttttttcaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 3998788  T
Q  118 ccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||| ||||||| ||||| ||||||||  || |||||||||||||||    
T  3998787 ccacttgattatttttttatactatcttttacactctctctttcatgt 3998740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 3971951 - 3971801
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||| ||||| || |||| |||||||  ||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  3971951 aggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctct 3971852  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  3971851 caaccactagattatttttttatactatctttcacactctctctttcatgt 3971801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 3997927 - 3998077
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||| ||||| || |||| |||||||  ||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  3997927 aggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctct 3998026  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  3998027 caaccactagattatttttttatactatctttcacactctctctttcatgt 3998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 52491891 - 52492035
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||     ||| |||||||||||||| ||||||||||||| ||||| | |||  ||||||||||||||    
T  52491891 ggtgccatttaatttgggaaaggagagttctttcc-----tggaaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 52491985  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  52491986 aaccactagattatttttttatactatctttcacactctctctttcatgt 52492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 32489946 - 32490064
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||| ||||| | |||  ||||||||||||||    
T  32489946 ggtgccatttaatttgggaaaggagaattcttttccaccatgggaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 32490045  T
Q  116 aaccactagattatttttt 134  Q
    |||||||  ||||||||||    
T  32490046 aaccactgaattatttttt 32490064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 45500497 - 45500620
Alignment:
Q  40 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 139  Q
    |||||| || |||| |||||||||||||| |||| ||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||| |||   ||    
T  45500497 gagtttgtttccacaatgggaaagttgattatgtccattagattaaatgaggaacacattcttattctactctctcaa-cactagattattgttttatct 45500595  T
Q  140 atcttccaccctctctctttcatgt 164  Q
    |||||||||||||||||||||||||    
T  45500596 atcttccaccctctctctttcatgt 45500620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 155
Target Start/End: Complemental strand, 8436685 - 8436574
Alignment:
Q  43 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatc 142  Q
    |||||| ||||||||  ||||||||| |||| |||| ||||||||| |||| ||||| ||||  |||| ||||||| | |||||||||||||||||||||    
T  8436685 tttttttccaccatgaaaaagttgataatgtgcatttgattaaatgtggaacacatttttatactactttctcaac-attagattattttttacactatc 8436587  T
Q  143 ttccaccctctct 155  Q
    |||||| ||||||    
T  8436586 ttccactctctct 8436574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 40 - 155
Target Start/End: Complemental strand, 8440233 - 8440119
Alignment:
Q  40 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 139  Q
    |||||||||  |||||||  ||||||||| |||| |||| ||||||||| |||| ||||| ||||  ||||||||||| || ||||||||||||||||||    
T  8440233 gagttttttttcaccatgaaaaagttgataatgtgcatttgattaaatgtggaacacattattatactactctctcaa-cattagattattttttacact 8440135  T
Q  140 atcttccaccctctct 155  Q
    ||||| ||| ||||||    
T  8440134 atctttcactctctct 8440119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 31556264 - 31556217
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  31556264 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaag 31556217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 37105127 - 37105076
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  37105127 gaggtgccgtttaatttgggaaacgagacttttttcccaccatgggaaagtt 37105076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 14667296 - 14667345
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  14667296 aggtgccgtttaatttgggaaaggaga-ttttttcccaccatgggaaagtt 14667345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 8653709 - 8653622
Alignment:
Q  75 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
    |||| ||| ||||||| || ||| |||||||||| || |||||| ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  8653709 catttgatcaaatgagaaacacactcttatcatattccctcaac-actagatcattttctacactatcttcc-ccctctctctttcatgt 8653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 49757230 - 49757181
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  49757230 ggtgccgtttaatttgggaaaggagacttttttcctaccatgggaaagtt 49757181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 42145325 - 42145277
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  42145325 gtgccatttaatttgggaaaggagactttttttccaccataggaaagtt 42145277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 8427276 - 8427346
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||||||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  8427276 attagattaaatgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 8427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 62
Target Start/End: Original strand, 17226968 - 17227014
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 62  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||    
T  17226968 ggtggcatttaatttgggaaaggagatttctttcccaccatgggaaa 17227014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 49756274 - 49756324
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||||| ||||||  ||| ||||||||||||||||||||    
T  49756274 aggtgccatttaatttggaaaaggaatgttatttcccaccatgggaaagtt 49756324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 11267651 - 11267588
Alignment:
Q  99 tcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||  ||| |||||| |||||||||||||||||||||| ||||||||||| |||||    
T  11267651 tcttatcatactccatca-ccactatattattttttacactatcttcc-ccctctctcttccatgt 11267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 21811879 - 21811926
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    |||||| |||||||||||||| |||| |||||||| ||||||||||||    
T  21811879 ggtgccgtttaatttgggaaatgagacttttttcctaccatgggaaag 21811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 25025234 - 25025304
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||| |||||||| ||||| |||||||||||||    
T  25025234 attagattaagtgaagaacatattcttaacatgctctctcaac-actagattttttttcacactatcttcca 25025304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 31556188 - 31556235
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||| ||||||||||| |||||||  |||||||||    
T  31556188 ggtgccatttaatttggaaaaggagagttctttcccatgatgggaaag 31556235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 32994927 - 32994974
Alignment:
Q  18 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||||||| | | |||||||||| ||||||||||||    
T  32994927 tgccatttaatttgggaaagcacatttttttcccatcatgggaaagtt 32994974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 41756194 - 41756241
Alignment:
Q  192 aaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 239  Q
    ||||| |||| ||||||||||||||| |||||||||||||||| ||||    
T  41756194 aaaatcgtacgctaacaagttttccggcagcaaccatgatggtgtgtg 41756241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 46719659 - 46719710
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||||||||| |  ||||||||| || ||||||||||||    
T  46719659 gaggtgccatttaatttgggaaatgctagttttttctcatcatgggaaagtt 46719710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 47737699 - 47737629
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  47737699 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 47737629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 65
Target Start/End: Original strand, 37104363 - 37104401
Alignment:
Q  27 atttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  37104363 atttgggaaaggagactttttttccaccatgggaaagtt 37104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 38923438 - 38923472
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  38923438 ggtgccatttaatttgggaaaggagagttctttcc 38923472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 45242341 - 45242307
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  45242341 ggtgccatttaatttgggaaaggagagttctttcc 45242307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 17227996 - 17227955
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatg 57  Q
    |||| ||||||||||||||||||||| || ||||||||||||    
T  17227996 ggtggcatttaatttgggaaaggagacttctttcccaccatg 17227955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 43638127 - 43638078
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  43638127 aggtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 43638078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 49749124 - 49749173
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||| ||||||||||| | |||||||||| ||| |||||||    
T  49749124 aggtgccatttaacttgggaaaggaaatttttttcccatcataggaaagt 49749173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 50305212 - 50305167
Alignment:
Q  119 cactagattattttttacactatcttccaccctctctctttcatgt 164  Q
    ||||| |||||| ||||| ||||||||||||||||||||| |||||    
T  50305212 cactatattattctttacgctatcttccaccctctctcttccatgt 50305167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 38337518 - 38337478
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  38337518 tttaatttgggaaagggaagttgtttcccaccatgggaaag 38337478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 39901846 - 39901894
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||| |||||  ||||||| ||||||| |||||||||||||||||||    
T  39901846 ggtgccgtttaacctgggaaatgagagttctttcccaccatgggaaagt 39901894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 38072339 - 38072116
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  38072339 ggtgccatttaatttgggaaatgagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgatgaatacattcttatcatactctctc 38072240  T
Q  116 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38072239 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttc 38072140  T
Q  216 cgacagcaaccatgatggtctgtg 239  Q
    || ||||||||||| |||| ||||    
T  38072139 cggcagcaaccatggtggtgtgtg 38072116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 7677855 - 7677635
Alignment:
Q  18 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  7677855 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacacattcttatcatattctctcaa 7677756  T
Q  118 ccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccg 217  Q
    | |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7677755 c-actaaattattttttacaatatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttccg 7677657  T
Q  218 acagcaaccatgatggtctgtg 239  Q
    |||||||||||| |||| ||||    
T  7677656 acagcaaccatggtggtgtgtg 7677635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 239
Target Start/End: Original strand, 4261209 - 4261428
Alignment:
Q  20 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 119  Q
    ||||||||||| ||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4261209 ccatttaatttaggaaaggagagttcttttctaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacc 4261308  T
Q  120 actagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccgac 219  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||| |    
T  4261309 actagattattttttacactatcttccaacctctctctttcatgttctcacactatatttgtttgatccttgaaaatggtatgctaacaagttttccggc 4261408  T
Q  220 agcaaccatgatggtctgtg 239  Q
    |||||||||| |||| ||||    
T  4261409 agcaaccatggtggtgtgtg 4261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 17145622 - 17145772
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  17145622 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 17145721  T
Q  116 aaccactagatta--ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||  ||||||| |||||||| ||| |||||||||||||||    
T  17145722 aaccactagattattttttttatactatctttcacactctctctttcatgt 17145772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 38071897 - 38072047
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  38071897 aggtgccatttaatttaggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 38071996  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38071997 caaccactagattatttttttatactatctttcacactctctctttcatgt 38072047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 668179 - 668328
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| ||||||||||||||    
T  668179 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctctc 668278  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||| |||||| ||||||| |||||||| ||| |||||||||||||||    
T  668279 aaccaccagattatttttttatactatctttcacactctctctttcatgt 668328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 37864356 - 37864206
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  37864356 aggtgccatttaatttgggaaataagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 37864257  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  37864256 caaccactagattatttttttatactatctttcacactctctctttcatgt 37864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 669151 - 669002
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||| | |||| ||||||||||||||    
T  669151 ggtgccatttaatttgggaaatgagagttttttcccaccataggaaagttgatcatatccattagatcaaatgaggaacatattcctatcatactctctc 669052  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  669051 aaccactagattatttttttatactatctttcacactctctctttcatgt 669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 4261645 - 4261495
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  4261645 aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatatttctatcatactctct 4261546  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  4261545 caaccattagattatttttttatactatctttcacactctctctttcatgt 4261495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 38778853 - 38778971
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||  | |||| |||||||||||||    
T  38778853 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggagcatattcctatcatactctct 38778952  T
Q  115 caaccactagattattttt 133  Q
    |||||||||||||||||||    
T  38778953 caaccactagattattttt 38778971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 38779611 - 38779498
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  38779611 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcttataatactctctc 38779512  T
Q  116 aaccactagattatt 130  Q
    || ||||||||||||    
T  38779511 aa-cactagattatt 38779498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 20 - 164
Target Start/End: Original strand, 7677421 - 7677566
Alignment:
Q  20 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 119  Q
    |||||||||||||||||||||| || ||||||||||||  |||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||||||    
T  7677421 ccatttaatttgggaaaggagaattctttcccaccatgaaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaacc 7677520  T
Q  120 actagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||| |||| ||||||| ||||||||  || |||||||||||||||    
T  7677521 actaaattatttttttatactatcttttacactctctctttcatgt 7677566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 41194512 - 41194659
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||| ||||||||| | |||||||||||||||| |    
T  41194512 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttaatcatgtccattaaatt-aatgaggaacatattcttatcatactcttt 41194610  T
Q  115 caaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
    | | ||||| ||||||||||| | |||||| || | ||||||||||||||    
T  41194611 cca-cactaaattattttttatattatctttcatcatctctctttcatgt 41194659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 17145920 - 17145802
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||   || ||||||||||||||||||| |||||||||||||||  || | |||| ||||||||||||||    
T  17145920 ggtgccatttaatttgggaaaggagagttcttttttactatgggaaagttgatcatgtccattagattaaatgaataacatattcctatcatactctctc 17145821  T
Q  116 aaccactagattatttttt 134  Q
    |||||||||||||||||||    
T  17145820 aaccactagattatttttt 17145802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 97
Target Start/End: Complemental strand, 37469053 - 37468972
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaataca 97  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37469053 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaataca 37468972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 32859257 - 32859380
Alignment:
Q  40 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 139  Q
    |||||||||  || || ||||||||||||  | | |||||||||||||| |||| ||||||||||  |||||||||||| | || |||||||||||||||    
T  32859257 gagttttttttcatcacgggaaagttgatagtatgcattagattaaatgtggaacacattcttatactactctctcaac-attaaattattttttacact 32859355  T
Q  140 atcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| |||||||||    
T  32859356 atcttccaccctctcactttcatgt 32859380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 73
Target Start/End: Original strand, 37468909 - 37468967
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgt 73  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37468909 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgt 37468967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 24322399 - 24322299
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| |||||||||||||||    
T  24322399 ggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacatttttatcatactctctc 24322300  T
Q  116 a 116  Q
    |    
T  24322299 a 24322299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 14 - 114
Target Start/End: Complemental strand, 44909409 - 44909309
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 113  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||| |  |  ||  | || ||| |||||||||||||||| | |||||||||||    
T  44909409 gaggtgccgtttaatttgggaaaggtaagttttttcccaccatgggaaaggtttttttggccgttggatcaaatgaggaatacattttaatcatactctc 44909310  T
Q  114 t 114  Q
    |    
T  44909309 t 44909309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 29006346 - 29006396
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  29006346 aggtgccatttaatttgggaaaggcttgttttttcccaccatgggaaagtt 29006396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 20890206 - 20890247
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  20890206 tttaatttgggaaaggacagttttttcccaccatgggaaagt 20890247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 134
Target Start/End: Original strand, 42607095 - 42607198
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 129  Q
    ||||||||| || || ||||||||||||||||||||| |  ||| |||||||| ||||||| || ||| |||||||||  ||| |||| |||| ||||||    
T  42607095 tgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagatcaaatgagaaacacaatcttatcatgatctatcaa-cacttgattat 42607193  T
Q  130 ttttt 134  Q
    |||||    
T  42607194 ttttt 42607198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 45888029 - 45887981
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  45888029 aggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 45887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 47332002 - 47331954
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  47332002 aggtgacatttaatttgggaaaggctagttttttcccaccatgggaaag 47331954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 29007248 - 29007198
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||||||||    
T  29007248 aggtgtcatttaatttgggaaaggcttgttttttcccaccatgggaaagtt 29007198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 41224892 - 41224842
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||    
T  41224892 aggtgccatttaatttgggaaaggcttattttttcccaccatgggaaagtt 41224842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 40257836 - 40257759
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcat 107  Q
    ||||||| | ||||| |||||||||||| |||||||| |  ||| |||||||| ||||||| || |||||||||||||    
T  40257836 tgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagatcaaatgagaaacacattcttatcat 40257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 4985443 - 4985395
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  4985443 aggtgacatttaatttgggaaatgctagttttttcccaccatgggaaag 4985395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 4989541 - 4989493
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  4989541 aggtgacatttaatttgggaaatgctagttttttcccaccatgggaaag 4989493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 27599211 - 27599303
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcata 108  Q
    |||| |||||||  ||||||||| ||||| |||||||||||||||||||| |   ||  ||||||||||| | | ||| ||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcata 27599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 29314578 - 29314630
Alignment:
Q  13 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||||| ||||||   ||||||| ||||||||||||||||    
T  29314578 ggaggtgccatttaatttgagaaaggcttgtttttttccaccatgggaaagtt 29314630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 45887286 - 45887326
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  45887286 tttaatttgggaaaggctagttttttcccaccatgggaaag 45887326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 27855625 - 27855695
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  27855625 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 27855695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 118
Target Start/End: Complemental strand, 29315360 - 29315257
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||| ||||||||||||||||   |||||||||||| |||||||||||   |  |   ||||||||  ||||| ||||||| ||||||||||||| ||    
T  29315360 aggtgcaatttaatttgggaaagactagttttttcccatcatgggaaagtaagttttaaccattagatctaatgaagaatacactcttatcatactccct 29315261  T
Q  115 caac 118  Q
    ||||    
T  29315260 caac 29315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 156
Target Start/End: Complemental strand, 41195329 - 41195275
Alignment:
Q  101 ttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 156  Q
    ||||||||||||||| || |||||||||||||||| |||||||| || ||||||||    
T  41195329 ttatcatactctctccac-actagattattttttatactatctttcatcctctctc 41195275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 41533896 - 41533943
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    |||||| ||||||||||||||||  |||||||| ||||||||||||||    
T  41533896 ggtgccgtttaatttgggaaaggtaagtttttttccaccatgggaaag 41533943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 27600143 - 27600041
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||| |||||||  ||||||||| ||||| |||||||||||||||||||| |   ||  || |||||||| | | ||| ||||||||||||||  |||||    
T  27600143 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacacattcttatcatagactctc 27600044  T
Q  116 aac 118  Q
    |||    
T  27600043 aac 27600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 668453 - 668420
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcc 50  Q
    |||||||||||||||||||||||||||| |||||    
T  668453 gtgccatttaatttgggaaaggagagttctttcc 668420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 44896046 - 44896095
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||| |||||||||||||||   ||||||| |||||||||||||||||    
T  44896046 ggtgccgtttaatttgggaaagactagtttttccccaccatgggaaagtt 44896095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 48259861 - 48259820
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaa 62  Q
    |||||||||||||||| |  ||||||||||||||||||||||    
T  48259861 catttaatttgggaaatgttagttttttcccaccatgggaaa 48259820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 24321424 - 24321472
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||||||||||  |||||| ||||| ||| ||||||    
T  24321424 aggtgccatttaatttgggaaaggttagttttatcccatcataggaaag 24321472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 24322429 - 24322469
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  24322429 tttaatttgggaaaggaaacttttttcccatcatgggaaag 24322469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 134
Target Start/End: Original strand, 40257594 - 40257697
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 129  Q
    ||||||| ||||||| ||| | ||||||| ||||||  |  ||| |||||||| ||||||| || |||||||||||||  ||| |||| |||| ||||||    
T  40257594 tgggaaatgagagttgttttcgaccatggaaaagttatttttgtccattagatcaaatgagaaacacattcttatcatgatctatcaa-cacttgattat 40257692  T
Q  130 ttttt 134  Q
    |||||    
T  40257693 ttttt 40257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 5035324 - 5035102
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5035324 ggtgccatttaatttgggaaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 5035225  T
Q  116 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 215  Q
    ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5035224 aac-actaaattatgttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 5035126  T
Q  216 cgacagcaaccatgatggtctgtg 239  Q
    || ||||||||||| |||| ||||    
T  5035125 cggcagcaaccatggtggtgtgtg 5035102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 34992314 - 34992163
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  34992314 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 34992215  T
Q  114 tcaaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  34992214 tcaaccactaaattatttttttatactatctttcacactctctctttcatgt 34992163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 41859309 - 41859457
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| ||| | |||| |||||||||||||    
T  41859309 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccgttagattaaatgaagaacatattcatatcatactctct 41859408  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcat 162  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  41859409 caaccactagattatttttttatactatctttcacactctctctttcat 41859457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 23 - 164
Target Start/End: Original strand, 37639718 - 37639860
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccact 122  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||| |||||||||||||||||    
T  37639718 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatgatactctctcaaccact 37639817  T
Q  123 agatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||| ||||||| |||||||| ||| |||||||||||||||    
T  37639818 agattatttttttatactatctttcacactctctctttcatgt 37639860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 32536708 - 32536857
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||||    
T  32536708 ggtgccatttaatttaggaaatgagagttctttcccaccatgggaaagttgatcatgtccattagattaaatggggaacatattcctatcatactctctc 32536807  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  32536808 aaccactagattatttttttatactatctttcacactctctctttcatgt 32536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 5034897 - 5035016
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||| | |||| |||||||||||||    
T  5034897 aggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattgaatgaggaacatattcatatcatactctct 5034996  T
Q  115 caaccactagattatttttt 134  Q
    ||||||||||||||||||||    
T  5034997 caaccactagattatttttt 5035016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 38023624 - 38023773
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||| ||||||||||||||||||||| || ||| ||| ||||| |||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  38023624 ggtgtcatttaatttgggaaaggagaattcttttccatcatggaaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctctc 38023723  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38023724 aaccactagattatttttttatactatctttcacactctctctttcatgt 38023773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 34992015 - 34992133
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  34992015 ggtgccatttaatttgggaaacgagagttattttccaccatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 34992114  T
Q  116 aaccactagattatttttt 134  Q
    |||||||| ||||||||||    
T  34992115 aaccactaaattatttttt 34992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 41860145 - 41859995
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||||||||| |||||| |||   || |||| |||||||||||||| ||||||||||||||||||| | |||  ||||||||| |||    
T  41860145 aggtgccatttaatttgggaaagaagagttattttttactatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactttct 41860046  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  41860045 caaccactatattatttttttatactatctttcacactctctctttcatgt 41859995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 32537534 - 32537387
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||| ||||||||||||||||| ||||||| ||| |||   || ||||||| ||||||| ||||| ||||||| ||||| | ||||||||||||||||||    
T  32537534 aggtaccatttaatttgggaaatgagagttcttttcca---tgagaaagttaatcatgtccattatattaaataaggaacatattcttatcatactctct 32537438  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||| ||||| |||||||| | | |||||||||||||||    
T  32537437 caaccactagattatttttttatactatctttcgcactctctctttcatgt 32537387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 164
Target Start/End: Complemental strand, 38024492 - 38024430
Alignment:
Q  102 tatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  38024492 tatcatactctctcaaccactagattattttttatactatctttcacactctctctttcatgt 38024430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 25876520 - 25876569
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  25876520 aggtgccatttaatttgggaaagaagatttttttcccaccatgggaaagt 25876569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 37640601 - 37640538
Alignment:
Q  24 ttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatg 88  Q
    |||||||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||||||    
T  37640601 ttaatttgggaaaggagagtttttttacactatggg-aagttgatcatgtttattagattaaatg 37640538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 61453 - 61502
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  61453 aggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 61502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 27918095 - 27918046
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  27918095 ggtgccgtttaatttgggaaatgagacttttttcccaccatgggaaagtt 27918046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 1365829 - 1365877
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||||    
T  1365829 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 1365877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 44098470 - 44098432
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccac 53  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  44098470 aggtgccatttaatttgggaaaggagagttctttcccac 44098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 10501877 - 10501822
Alignment:
Q  99 tcttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 156  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  10501877 tcttatcatactc-ctcaac-actagattattttttacactatcatcaaccctctctc 10501822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 41092172 - 41092221
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  41092172 ggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaagtt 41092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 39254787 - 39254835
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||||||||||||||||| || ||||||||||| |||||||    
T  39254787 ggtggcatttaatttgggaaaggagacttctttcccaccataggaaagt 39254835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 7818534 - 7818604
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  7818534 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 7818604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 10806008 - 10806078
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||||||| ||| | ||||||| ||| ||||||||| ||||||||| || || |||||||||||||    
T  10806008 attagattaaatgaagaacatattcttaacatgctctctcaa-cactagatttttcttcacactatcttcca 10806078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 37639976 - 37639929
Alignment:
Q  192 aaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 239  Q
    ||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  37639976 aaaatcgtacgctaacaagttttccgacagcaaccatggtggtgtgtg 37639929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 39852829 - 39852759
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  39852829 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 39852759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 41348146 - 41348193
Alignment:
Q  18 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||| ||||||||||||||||  ||||||| |||||||||||||||||    
T  41348146 tgccgtttaatttgggaaaggttagtttttccccaccatgggaaagtt 41348193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 43924490 - 43924537
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  43924490 ggtggcatttaatttgggaaagggaagttgtttcccaccatgggaaag 43924537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 117
Target Start/End: Complemental strand, 30273005 - 30272903
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||| ||||||||||||||| | | |||||||||| |||||||||||   |  |   ||||||||| ||||| ||||||| | ||||||||||| ||    
T  30273005 aggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagtaagttttaaccattagattcaatgaagaatacacttttatcatactccct 30272906  T
Q  115 caa 117  Q
    |||    
T  30272905 caa 30272903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 146
Target Start/End: Complemental strand, 38778821 - 38778752
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcc 146  Q
    |||||||||| ||| ||||| ||| ||| ||||||||||||| ||||||||| || || ||||||||||||    
T  38778821 attagattaagtgaagaatatatttttaacatactctctcaa-cactagatttttcttcacactatcttcc 38778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 4364046 - 4364087
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||| | |||||||||| |||||||||||    
T  4364046 tttaatttgggaaaggaaacttttttcccatcatgggaaagt 4364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 7424611 - 7424562
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||| |||||||||| ||||| ||| |||||| |||||||||||||||    
T  7424611 aggtgcaatttaatttgagaaagaagactttttttccaccatgggaaagt 7424562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 36936745 - 36936644
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||| ||||||||||||||| | | |||||||||| |||||||||||  ||  |   ||||||||| ||| | ||||||| | ||||||||||| |||    
T  36936745 ggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagtaaattttaaccattagattcaataaagaatacacttttatcatactccctc 36936646  T
Q  116 aa 117  Q
    ||    
T  36936645 aa 36936644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 39255801 - 39255752
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| ||||||| |||||||| |||| || |||||||||||||||||||    
T  39255801 aggtggcatttaacttgggaaatgagacttctttcccaccatgggaaagt 39255752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 44751607 - 44751656
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| ||||||| ||||||||||||| || ||||||| |||||||||||    
T  44751607 aggtggcatttaacttgggaaaggagacttctttcccatcatgggaaagt 44751656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 62288 - 62240
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||||||| ||||||||| || ||||||||||| |||||||    
T  62288 ggtgacatttaatttgagaaaggagacttctttcccaccataggaaagt 62240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 36936466 - 36936418
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||| ||||||||||||||| | | |||||||||| |||||||||||    
T  36936466 ggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagt 36936418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 42345166 - 42345214
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  42345166 ggtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 42345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 16 - 229
Target Start/End: Original strand, 27221 - 27433
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  27221 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacacattcttatcatactctctc 27320  T
Q  116 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 215  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  27321 aac-actaaattattttttacactatcttccaccctctctctttcatgttctcatactaaatttgtttgatccttgaaaatggtacgctaacaagttttc 27419  T
Q  216 cgacagcaaccatg 229  Q
    || |||||||||||    
T  27420 cggcagcaaccatg 27433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 27623 - 27546
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaa 93  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  27623 ggtgccatttaatttggaaaaggagagttttttcccaccatgggaaagttgatcatatccattagattaaatgaggaa 27546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 15 - 172
Target Start/End: Original strand, 33001931 - 33002087
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  33001931 aggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaatacattcttatcatattctct 33002030  T
Q  115 caaccactagattattttttacactatcttccaccctctctctttcatgttctcacac 172  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33002031 caa-cactaaattattttttacactatcttccaccctctctctttcatgttctcacac 33002087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 33002865 - 33002715
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  33002865 aggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 33002766  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  33002765 caaccactagattatttttttatactatctttcacactctctctttcatgt 33002715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 686417 - 686565
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  686417 ggtgccatttaatttgggaaaggagagtttt-tcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatattctctc 686515  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  686516 aaccactagattatttttttatactatctttcacactctctctttcatgt 686565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 15184065 - 15183916
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  15184065 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 15183966  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| |||||  ||||||| ||| |||||||||||||||    
T  15183965 aaccactagattatttttttatgctatctttcacactctctctttcatgt 15183916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 8204119 - 8204267
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||| |||    
T  8204119 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactatct 8204218  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcat 162  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  8204219 caaccactagattatttttttatactatctttcacactctctctttcat 8204267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 8040194 - 8040344
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  8040194 aggtgccatttaatttgggaaaggacagttctttcccatcgtgggaaagttgatcatgtccattagattaaatgaggaatatattcttatcatactctct 8040293  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  8040294 caaccactacattatttttttatactatctttcacactctctctttcatgt 8040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 15183088 - 15183238
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttt-tttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||| | |||  |||||||||||||    
T  15183088 ggtgccatttaatttgggaaaggagagtttatttcccatcatgagaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 15183187  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||| ||||||| |||||||| ||| ||||| |||||||||    
T  15183188 caaccactagattatttttttatactatctttcacactctcactttcatgt 15183238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 12190207 - 12190078
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||  |||||||||||||    
T  12190207 aggtgccatttaatttgggaaaagagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 12190108  T
Q  115 caaccactagattattttttacactatctt 144  Q
    ||| || |||||||||||||| | ||||||    
T  12190107 caatcattagattattttttatattatctt 12190078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 36626679 - 36626560
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | ||| ||||||| ||||||| ||||||||||||||||||    
T  36626679 aggtgccatttaatttgggaaatgagagttctttcccaccatgggaaagttgatcatgtccgttatattaaataaggaatatattcttatcatactctct 36626580  T
Q  115 caaccactagattatttttt 134  Q
    ||||||||||||||| ||||    
T  36626579 caaccactagattatatttt 36626560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 687395 - 687247
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 116  Q
    |||||||||||||||||||||||||||| ||| |||| |||| ||||||||| |||| ||||||||||||||||||| | |||| |||||||||||||||    
T  687395 gtgccatttaatttgggaaaggagagttcttttccactatggaaaagttgattatgtccattagattaaatgaggaacatattcctatcatactctctca 687296  T
Q  117 accactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    | ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  687295 atcactaaattatttttttatactatctttcacactctctctttcatgt 687247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 8040493 - 8040374
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||||||||||| | || ||||||||| |||||||||| ||||||| |||||||||||||  |||| | |||  |||||||||||||    
T  8040493 aggtgccatttaatttgggaaaggaaatttctttcccaccgtgggaaagttaatcatgtccattagattaaatagggaacatatttctatcatactctct 8040394  T
Q  115 caaccactagattatttttt 134  Q
    ||||||||||||||||||||    
T  8040393 caaccactagattatttttt 8040374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 33002584 - 33002646
Alignment:
Q  177 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 239  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||    
T  33002584 tttgtttgatccttgaaaatggtacgctaacaagttttccggcagcaaccatggtggtgtgtg 33002646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 33284072 - 33283971
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| ||||||||||||||    
T  33284072 aggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacatttttatcatactctct 33283973  T
Q  115 ca 116  Q
    ||    
T  33283972 ca 33283971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 39950404 - 39950451
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39950404 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 39950451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 33283169 - 33283265
Alignment:
Q  20 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 116  Q
    |||||||||||||||||||  |||||| ||||| |||||||||| |  |  ||  |||||||| |||||||||| ||||| ||||||||||||||||    
T  33283169 ccatttaatttgggaaaggttagttttatcccatcatgggaaaggtttttttgaccattagatcaaatgaggaacacatttttatcatactctctca 33283265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 2319266 - 2319313
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  2319266 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 2319313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 4607470 - 4607513
Alignment:
Q  22 atttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  4607470 atttaatttgggaaagtagacttttttcccaccatgggaaagtt 4607513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 16971081 - 16970979
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||   |||||||||||| |||||||||||   |  |   ||||||||  ||||| ||||||| ||||||||||||| |||    
T  16971081 ggtgccatttaatttgggaaagactagttttttcccatcatgggaaagtaagttttaaccattagatctaatgaagaatacactcttatcatactccctc 16970982  T
Q  116 aac 118  Q
    |||    
T  16970981 aac 16970979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 4608638 - 4608589
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  4608638 ggtgccatttaatctgggaaaggaatgttatttcccaccatgggaaagtt 4608589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 13654932 - 13654981
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| ||||||||||||||||||||| || ||||||||||| |||||||    
T  13654932 aggtgacatttaatttgggaaaggagacttctttcccaccataggaaagt 13654981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 2320016 - 2319968
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| ||||||||||||||||||  |||||||||||||||| ||||||    
T  2320016 aggtggcatttaatttgggaaaggctagttttttcccaccataggaaag 2319968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 26268343 - 26268391
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  26268343 aggtggcatttaatttgggaaatgttagttttttcccaccatgggaaag 26268391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 33685772 - 33685824
Alignment:
Q  43 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaata 95  Q
    |||||||||||||||  ||||||||| |||| ||||||||||||||| |||||    
T  33685772 ttttttcccaccatgtaaaagttgattatgtccattagattaaatgaagaata 33685824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 39950480 - 39950444
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttccca 52  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39950480 ggtgccatttaatttgggaaaggagagttctttccca 39950444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 13404752 - 13404701
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttg 66  Q
    ||||| ||||||||||||||| |||   ||||||||||||||||||||||||    
T  13404752 aggtggcatttaatttgggaacggactcttttttcccaccatgggaaagttg 13404701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 26269069 - 26269022
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||||||    
T  26269069 ggtggcatttaatttgggaaaggttagttttttcccatcatgggaaag 26269022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 686701 - 686667
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  686701 ggtgccatttaatttgggaaaggagagttctttcc 686667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 2458403 - 2458353
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| ||||||    
T  2458403 aggtgccgtttaatttgggaaatgagactttttttccaccatggaaaagtt 2458353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 8226641 - 8226690
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||| ||||| ||| ||||||||| |||||| |||||    
T  8226641 aggtgccatttaatttgagaaagaagaattttttccctccatggaaaagt 8226690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 31148493 - 31148444
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||| ||||||||||||||| | | |||||||||| ||||||||||||    
T  31148493 ggtgccgtttaatttgggaaagcacacttttttcccatcatgggaaagtt 31148444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 39167483 - 39167442
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaa 62  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  39167483 catttaatttgggaaaggagacttctttcccatcatgggaaa 39167442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 42518811 - 42518891
Alignment:
Q  75 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-ttttacactatcttccaccctctct 155  Q
    |||||||||||||||| || | ||||||||| |||| |||||| ||||| |||||| ||||| ||||| || ||||||||||    
T  42518811 cattagattaaatgagaaacaaattcttatcgtactatctcaa-cactaaattattgttttatactatttttcaccctctct 42518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 26688166 - 26688214
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  26688166 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 26688214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 26957897 - 26957945
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  26957897 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 26957945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 39523319 - 39523164
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||    
T  39523319 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgaggaatacatctttaccatactctctc 39523220  T
Q  116 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacac 172  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39523219 aa-cactaaattattttttacactatcttccaccctctctctttcatgttctcacac 39523164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 11417686 - 11417836
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  11417686 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 11417785  T
Q  115 caaccactagattat-tttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| |||||| |||||||| ||| |||||||||||||||    
T  11417786 caaccactagattatatttttatactatctttcacactctctctttcatgt 11417836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 26611332 - 26611182
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  26611332 aggtgtcatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 26611233  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||| ||||| ||||||||  || |||||||||||||||    
T  26611232 caaccactagattatttttttatactatcttttacactctctctttcatgt 26611182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 10425108 - 10424958
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  10425108 aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaatatattcctatcatactctct 10425009  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||| ||||| | |||||| ||| |||||||||||||||    
T  10425008 caaccactagattatttttttatattatctttcacactctctctttcatgt 10424958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 21166424 - 21166274
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  21166424 aggtgccatttaatttgagaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 21166325  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  21166324 caaccactagattatttttttatactatctttcacactctctctttcatgt 21166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 29651381 - 29651231
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||| | |||| |||||||||||||    
T  29651381 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctct 29651282  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  29651281 caaccactagattatttttttatactatctttcacactctctctttcatgt 29651231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 10424123 - 10424272
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  10424123 ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 10424222  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  10424223 aaccactagattatttttttatactatctttcacactctctctttcatgt 10424272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 20 - 172
Target Start/End: Complemental strand, 38143781 - 38143628
Alignment:
Q  20 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 119  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| | |||| ||||||||||||||||||    
T  38143781 ccatttaatttgggaaatgagagttctttcccaccatgggaaagttggtcatgtccattagattaaatgaggaacatattcctatcatactctctcaacc 38143682  T
Q  120 actagattatt-ttttacactatcttccaccctctctctttcatgttctcacac 172  Q
    ||||||||||| ||||| |||||||| ||| ||||||||||||||| |||||||    
T  38143681 actagattatttttttatactatctttcacactctctctttcatgtcctcacac 38143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 45230365 - 45230514
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  45230365 ggtgccatttaattcgggaaaagagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 45230464  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  45230465 aaccactagattatttttttatactatctttcacactctctctttcatgt 45230514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 36865765 - 36865616
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  36865765 ggtgacatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 36865666  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| ||||||||  || |||||||||||||||    
T  36865665 aaccactagattatttttttatactatcttttacactctctctttcatgt 36865616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 11417985 - 11417867
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  11417985 ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 11417886  T
Q  116 aaccactagattatttttt 134  Q
    |||||||||||||||||||    
T  11417885 aaccactagattatttttt 11417867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 26610350 - 26610495
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 120  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||    
T  26610350 catttaatttgggaaatgagagttctttcccaccatgggaaaattgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 26610449  T
Q  121 ctagatta--ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||  ||||||| |||||||| ||| |||||||||||||||    
T  26610450 ctagattattttttttatactatctttcacactctctctttcatgt 26610495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 38695002 - 38694850
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||  |||||||||||||||||| | |||| ||||||||||||||    
T  38695002 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatgtctattagattaaatgaggaaaatattcatatcatactctctc 38694903  T
Q  116 aaccactagattatttttt---ac-actatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||||||   || |||||||| ||| |||||||||||||||    
T  38694902 aaccactagattatttttttatactactatctttcacactctctctttcatgt 38694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 45236008 - 45235859
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | |||  ||||||| ||||||    
T  45236008 ggtgccatttaatttggaaaaggagagttctttcccaccatgggaaagttaatcatgtccattagattaaatgaggaacatatttctatcatattctctc 45235909  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  45235908 aaccactagattatttttttatactatctttcacactctctctttcatgt 45235859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 31836510 - 31836390
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 113  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  31836510 gaggtgccatttaatttgagaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctc 31836411  T
Q  114 tcaaccactagattatttttt 134  Q
    |||||||||||||||||||||    
T  31836410 tcaaccactagattatttttt 31836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 164
Target Start/End: Original strand, 29650416 - 29650564
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 116  Q
    |||||||||||||||||||| ||||||| ||| ||| | |||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||    
T  29650416 gtgccatttaatttgggaaatgagagttcttttccatcttgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 29650515  T
Q  117 accactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||| ||||||| |||||||| ||| |||||| ||||||||    
T  29650516 accactagattatttttttatactatctttcacactctctttttcatgt 29650564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 38694702 - 38694820
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  38694702 ggtgccatttaatttggaaaaggagagttctttcccagcatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 38694801  T
Q  116 aaccactagattatttttt 134  Q
    |||||||||||||||||||    
T  38694802 aaccactagattatttttt 38694820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 21165447 - 21165596
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||| |||| |||||||||||||| | |||  ||||||||||||||    
T  21165447 ggtgccatttaatttgggaaagaatagttctttcccaccatgagaaagttgatcatgtccatttgattaaatgaggaacatatttctatcatactctctc 21165546  T
Q  116 aaccactagatt-attttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||| |||||||| |||||||| |||  ||||||||||||||    
T  21165547 aaccactagattaattttttatactatctttcacagtctctctttcatgt 21165596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 9939420 - 9939301
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  9939420 aggtgccatttaatttgagaaaggggagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 9939321  T
Q  115 caaccactagattatttttt 134  Q
    ||||||||| ||||||||||    
T  9939320 caaccactatattatttttt 9939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 39522374 - 39522524
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||| ||||||||||||||||||| |||| |||  ||||||||||||||||||||| | ||||||||||||||||||| | |||| |||||||||||||    
T  39522374 aggtgtcatttaatttgggaaaggatagttctttttcaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctct 39522473  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||| ||||||| |||||||| | | ||| |||||||||||    
T  39522474 caaccactagattatttttttatactatctttcgcactccctctttcatgt 39522524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 31835148 - 31835297
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||  |||| | |||| ||||||||||| ||||||||||| |||| |||||||||||| |||||| | |||| ||||||||||||||    
T  31835148 ggtgccatttaatttgaaaaagtatagttctttcccaccataggaaagttgattatgtccattagattaaacgaggaacatattcctatcatactctctc 31835247  T
Q  116 aaccactagattat-tttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||| |||||| |||||||| ||| |||||||||||||||    
T  31835248 aaccactagattatctttttatactatctttcacactctctctttcatgt 31835297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 134
Target Start/End: Original strand, 36864818 - 36864935
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 116  Q
    |||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||| || | |||| |||||||||||||||    
T  36864818 gtgctatttaatttgggaaaggagagttctttctcaccatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctca 36864917  T
Q  117 accactagattatttttt 134  Q
    ||||||||||||||||||    
T  36864918 accactagattatttttt 36864935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 162
Target Start/End: Original strand, 9939124 - 9939269
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||| ||||||||||||||||| |||||| |||    | ||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||||    
T  9939124 aggtgtcatttaatttgggaaagtagagttcttt---tctatgggaaagttgatcatgtccattagattaaatgagaaacatattcttatcatactctct 9939220  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcat 162  Q
    |||||||||||||| ||||||| |||||||| |||  ||||||||||||    
T  9939221 caaccactagattatttttttatactatctttcacattctctctttcat 9939269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 38143506 - 38143606
Alignment:
Q  34 aaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttt 133  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  38143506 aaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattattttt 38143605  T
Q  134 t 134  Q
    |    
T  38143606 t 38143606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 30 - 164
Target Start/End: Original strand, 25970120 - 25970250
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 129  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||| || | ||  ||||||||||||||    |||||||||||    
T  25970120 tgggaaaggggagttgtttcccaccatgggaaagttgat-atgtccattagattaaatgagaaacaaatctttatcatactctct----cactagattat 25970214  T
Q  130 t-ttttacactatcttccaccctctctctttcatgt 164  Q
    | ||||||||||||||||||| ||||||||||||||    
T  25970215 tgttttacactatcttccaccatctctctttcatgt 25970250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 36451461 - 36451327
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 129  Q
    ||||||||  ||||| |||| |||||||| ||||||||| |||| |||||||||||||||  || | || |||||| ||||||||||| |||||||||||    
T  36451461 tgggaaagaggagttgtttctcaccatggaaaagttgattatgtccattagattaaatgaaaaacaaatccttatcctactctctcaa-cactagattat 36451363  T
Q  130 t-ttttacactatcttccaccctctctctttcatgt 164  Q
    | ||||||||||||||||||| ||||||||||||||    
T  36451362 tgttttacactatcttccaccatctctctttcatgt 36451327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 172
Target Start/End: Original strand, 11806129 - 11806244
Alignment:
Q  54 catgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctct 153  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||| ||||| ||||||||||| |||||| |||||||||||| |||  | ||  ||||    
T  11806129 catgggaaagttaatcatgtccattagattaaatgaggaacacatttttatcctactctctcaa-cactagtttattttttacattattattca--ctct 11806225  T
Q  154 ctctttcatgttctcacac 172  Q
    |||||||||||||||||||    
T  11806226 ctctttcatgttctcacac 11806244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 164
Target Start/End: Original strand, 23383327 - 23383457
Alignment:
Q  33 gaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatttt 132  Q
    |||||||||||| |||||||||||||||||||| ||  | | |||| ||| |||||| ||| ||| |||||||||||||  ||||  ||||||||| |||    
T  23383327 gaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaatgaagaacacactcttatcatactccatcaat-actagattaattt 23383425  T
Q  133 ttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||||||||||||| |||||    
T  23383426 ttacactatcttccaccctctctcttccatgt 23383457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 17648165 - 17648044
Alignment:
Q  43 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-ttttacactat 141  Q
    |||||| |||| ||| |||||||||| || | ||||||||||||| || |||| ||||||||| ||||||||||| ||||| |||||| |||||||||||    
T  17648165 tttttttccactatgtgaaagttgattatatccattagattaaataagaaataaattcttatcttactctctcaa-cactatattattgttttacactat 17648067  T
Q  142 cttccaccctctctctttcatgt 164  Q
    |||||| ||||||||||||||||    
T  17648066 cttccatcctctctctttcatgt 17648044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 36450742 - 36450871
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 129  Q
    ||||||||| ||||| ||| ||||||||||||||||||| |||| |||| ||||||||||| || | ||  ||||| ||||||||||  ||||||||| |    
T  36450742 tgggaaaggggagttgttttccaccatgggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctcatacactagattgt 36450841  T
Q  130 t-ttttacactatcttccaccctctctctt 158  Q
    | ||||||||||||||||||| ||||||||    
T  36450842 tgttttacactatcttccaccatctctctt 36450871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 25970852 - 25970701
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||| |||||| | ||||||| | ||||| |||||||||||| |||||||||| |||| ||||  |||||||||| || | ||  ||||| ||||||||    
T  25970852 aggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaagttgattatgtccattgaattaaatgagtaacaaatctttatcctactctct 25970753  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcatgtt 165  Q
    ||  ||||||||| || ||||||||||||||||||| |||||||||| ||||    
T  25970752 catacactagattgttgttttacactatcttccaccatctctctttcttgtt 25970701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Complemental strand, 47377648 - 47377597
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  47377648 gaggtgccatttaatttgggaaaggggagttgtttcccaccatgggaaagtt 47377597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 177 - 239
Target Start/End: Complemental strand, 39522655 - 39522593
Alignment:
Q  177 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 239  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||| ||||    
T  39522655 tttgtttgatccttgaaaatggtacgctaacaagtttttcggcagcaaccatggtggtgtgtg 39522593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 30808621 - 30808713
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcata 108  Q
    |||| |||||||  ||||||||||||||| |||||||||||||||||||| |   ||  ||||||||||| | | ||||||||||||||||||    
T  30808621 ggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaatacattcttatcata 30808713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 64
Target Start/End: Original strand, 3847891 - 3847934
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  3847891 catttaatttgggaaaggagacttttttcccaccatgggaaagt 3847934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 47198603 - 47198653
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  47198603 gaggtgacatttaatttgggaaaggagacttctttcccaccatgggaaagt 47198653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 42544487 - 42544536
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  42544487 aggtgccatttaatttgggaaagaagacttttttcccaccatggaaaagt 42544536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Original strand, 47376852 - 47376905
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatc 69  Q
    |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc 47376905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 38014970 - 38014870
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||| ||||||||||||||||  ||||||| ||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| | |||||||||||||    
T  38014970 ggtgccgtttaatttgggaaaggctagtttttccccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacattttaatcatactctctc 38014871  T
Q  116 a 116  Q
    |    
T  38014870 a 38014870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 64
Target Start/End: Complemental strand, 3848621 - 3848578
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  3848621 catttaatttgggaaaggagacttctttcccaccatgggaaagt 3848578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 11680283 - 11680325
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  11680283 tttaatttgggaaaggttagttttttcccaccatgggaaagtt 11680325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 11688562 - 11688604
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  11688562 tttaatttgggaaaggttagttttttcccaccatgggaaagtt 11688604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 25370511 - 25370553
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  25370511 catttaatttgggaaaggctagttttttcccaccatgggaaag 25370553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 28684281 - 28684231
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||| ||||||||||||||||||||| |||||||| ||||| ||||||||    
T  28684281 aggtgacatttaatttgggaaaggagacttttttcctaccataggaaagtt 28684231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 37275088 - 37275137
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  37275088 ggtgccgtttaatttgggaaaggagacttctttcccaccatgagaaagtt 37275137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 46765218 - 46765169
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  46765218 gaggtggcatttaatttgggaaagactagttttttcccaccatgggaaag 46765169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 52757812 - 52757861
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| ||| ||||||||| |||| |||||||    
T  52757812 aggtgccatttaatttgggaaagaagacttttttccctccataggaaagt 52757861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 145
Target Start/End: Original strand, 5825393 - 5825459
Alignment:
Q  75 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttc 145  Q
    |||||||| |||||||||| ||||| ||||| ||||||||||| ||||||   ||||||||||||||||||    
T  5825393 cattagatcaaatgaggaacacattattatcctactctctcaa-cactag---attttttacactatcttc 5825459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 25371593 - 25371545
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||||||||||||||||| || |||||||||||| ||||||    
T  25371593 ggtgacatttaatttgggaaaggagacttctttcccaccatgagaaagt 25371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 12589286 - 12589388
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtt-----cattagattaaatgaggaatacattcttatcatac 109  Q
    ||||| |||||||||||||||||   ||||||||||||| |||||||||     || |||     ||||||||||||||| |||||||||| ||||||||    
T  12589286 aggtgacatttaatttgggaaagattagttttttcccactatgggaaag-----caagtttcaaccattagattaaatgaagaatacattcatatcatac 12589380  T
Q  110 tctctcaa 117  Q
    || |||||    
T  12589381 tccctcaa 12589388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Original strand, 29651115 - 29651162
Alignment:
Q  192 aaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 239  Q
    ||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  29651115 aaaatcgtacgctaacaagttttccgacagcaaccatggtggtgtgtg 29651162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 64
Target Start/End: Original strand, 55159177 - 55159228
Alignment:
Q  13 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||||  |||||||||||||||||||| || ||||| |||||||||||||    
T  55159177 ggaggtggtatttaatttgggaaaggagacttctttcctaccatgggaaagt 55159228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 10424419 - 10424385
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  10424419 ggtgccatttaatttgggaaaggagagttctttcc 10424385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 12590244 - 12590202
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||  |||||||| ||||||||||||||||    
T  12590244 tttaatttgggaaaggctagtttttttccaccatgggaaagtt 12590202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 21166137 - 21166171
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  21166137 ggtgccatttaatttgggaaaggagagttctttcc 21166171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 23425256 - 23425206
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||| |||||| | |||||| |||||||| ||||||||||||||||||||    
T  23425256 aggtggcatttagtatgggaatggagagttgtttcccaccatgggaaagtt 23425206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 25655680 - 25655638
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||   |||||||||||||||||||||||||    
T  25655680 tttaatttgggaaagactagttttttcccaccatgggaaagtt 25655638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 29650689 - 29650655
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  29650689 ggtgccatttaatttgggaaaggagagttctttcc 29650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 31836221 - 31836255
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  31836221 ggtgccatttaatttgggaaaggagagttctttcc 31836255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 31910553 - 31910603
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||| |||||||||| |||||||   ||||||||||||||||||||||||    
T  31910553 aggtgtcatttaatttaggaaaggcttgttttttcccaccatgggaaagtt 31910603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 45235733 - 45235767
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  45235733 ggtgccatttaatttgggaaaggagagttctttcc 45235767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 30478308 - 30478357
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  30478308 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 30478357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 42545611 - 42545562
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||||||||| | | |||||||||| ||| ||||||||    
T  42545611 ggtgccatttaatttgggaaagtacacttttttcccatcataggaaagtt 42545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 47199444 - 47199395
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| |||||||||||||||| |||| || ||||||||||| |||||||    
T  47199444 aggtggcatttaatttgggaaaagagacttctttcccaccataggaaagt 47199395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 48013316 - 48013365
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  48013316 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 48013365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 55160115 - 55160067
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| |||||||||||||||||||||  |||||| ||||||||||||||    
T  55160115 aggtggcatttaatttgggaaaggaga-ctttttctcaccatgggaaagt 55160067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 11681323 - 11681275
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| |||||||||||| ||||   |||||||||||||||||||||||    
T  11681323 aggtggcatttaatttggaaaagactagttttttcccaccatgggaaag 11681275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 11689602 - 11689554
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| |||||||||||| ||||   |||||||||||||||||||||||    
T  11689602 aggtggcatttaatttggaaaagactagttttttcccaccatgggaaag 11689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 147
Target Start/End: Complemental strand, 20822754 - 20822706
Alignment:
Q  99 tcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    ||||||| ||||||||  | ||||| |||||||||||||||||||||||    
T  20822754 tcttatcgtactctctttaacactatattattttttacactatcttcca 20822706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 23865365 - 23865321
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatggga 60  Q
    |||||| ||||||||| ||||||||| || |||||||||||||||    
T  23865365 ggtgccgtttaatttgtgaaaggagacttgtttcccaccatggga 23865321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 52758757 - 52758709
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||||||| |  ||||||||| || ||||||||||||    
T  52758757 gtgccatttaatttgggaaatgctagttttttctcatcatgggaaagtt 52758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 3542816 - 3542963
Alignment:
Q  18 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  3542816 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctcaa 3542915  T
Q  118 ccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  3542916 ccactagattatttttttaaactatctttcacactctctctttcatgt 3542963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 172
Target Start/End: Complemental strand, 33480676 - 33480519
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  33480676 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 33480577  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgttctcacac 172  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||||||||| |||||    
T  33480576 aaccactagattatttttttatactatctttcacactctctctttcatgttcccacac 33480519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 3543111 - 3542993
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  3543111 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 3543012  T
Q  116 aaccactagattatttttt 134  Q
    |||||||||||||||||||    
T  3543011 aaccactagattatttttt 3542993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 15083366 - 15083217
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  15083366 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 15083267  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  15083266 aaccactagattatttttttatactatctttcacactctctctttcatgt 15083217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 22579935 - 22580084
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  22579935 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 22580034  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    || |||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  22580035 aatcactagattatttttttatactatctttcacactctctctttcatgt 22580084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 33018167 - 33018316
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||    
T  33018167 ggtgccatttaatttgggaaaggagagttctttcccatcattggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctctc 33018266  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||| ||||||| ||||||| |||||||| ||| |||||||||||||||    
T  33018267 aaccattagattatttttttatactatctttcacactctctctttcatgt 33018316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 33479698 - 33479846
Alignment:
Q  18 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||||    
T  33479698 tgccatttaatttgggaaaggagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaa 33479797  T
Q  118 ccactagatta--ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||  ||||||| |||||||| ||| |||||| ||||||||    
T  33479798 ccactagattattttttttatactatctttcacactctctatttcatgt 33479846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 15082402 - 15082546
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 120  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||    
T  15082402 catttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 15082501  T
Q  121 ctagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||| ||||||| |||||||| ||| |||||||||||||||    
T  15082502 ctagattatttttttatactatctttcacactctctctttcatgt 15082546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 134
Target Start/End: Complemental strand, 33018466 - 33018346
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 113  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  33018466 gaggtgtcgtttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctc 33018367  T
Q  114 tcaaccactagattatttttt 134  Q
    |||||||||||||||||||||    
T  33018366 tcaaccactagattatttttt 33018346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 154
Target Start/End: Original strand, 7193337 - 7193474
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||    
T  7193337 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatattcttatcatactctct 7193436  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctc 154  Q
    |||||   |||||| ||||||| |||||||| ||| |||||    
T  7193437 caacc---agattatttttttatactatctttcacactctc 7193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 160
Target Start/End: Complemental strand, 22587354 - 22587213
Alignment:
Q  20 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 119  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||| |||||| ||||| |    
T  22587354 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22587255  T
Q  120 actagattatt-ttttacactatcttccaccctctctctttc 160  Q
    ||||||||||| ||||| |||||||| ||| |||||||||||    
T  22587254 actagattatttttttatactatctttcacactctctctttc 22587213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 7193627 - 7193508
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    ||||||||||||||||| ||||| |||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||| |||  |||||||||||||    
T  7193627 aggtgccatttaatttgagaaagtagagttcttttccatcatgggaaagttgatcatatccattagattaaatgaggaatatatttctatcatactctct 7193528  T
Q  115 caaccactagattatttttt 134  Q
    ||||||||||||||||||||    
T  7193527 caaccactagattatttttt 7193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 22582523 - 22582420
Alignment:
Q  20 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 119  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||| |||||| ||||| |    
T  22582523 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22582424  T
Q  120 acta 123  Q
    ||||    
T  22582423 acta 22582420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 24125972 - 24126021
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaagtt 24126021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 69
Target Start/End: Complemental strand, 24126766 - 24126713
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatc 69  Q
    |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  24126766 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc 24126713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 7159390 - 7159341
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| | | |||||||||| |||||||||||    
T  7159390 aggtgccatttaatttgggaaagcaaacttttttcccatcatgggaaagt 7159341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 7531829 - 7531877
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||||||||||||||||| || ||||| |||||||||||||    
T  7531829 ggtggcatttaatttgggaaaggagacttctttcctaccatgggaaagt 7531877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 22580200 - 22580153
Alignment:
Q  192 aaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 239  Q
    ||||| |||| ||||||||||||||| |||||||||||||||| ||||    
T  22580200 aaaatcgtacgctaacaagttttccggcagcaaccatgatggtgtgtg 22580153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 10607406 - 10607448
Alignment:
Q  21 catttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    |||||||||||||||||   |||||||||||||||||||||||    
T  10607406 catttaatttgggaaagactagttttttcccaccatgggaaag 10607448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 10608361 - 10608319
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||   ||||||||||||||||||||||||    
T  10608361 tttaatttgggaaaggctggttttttcccaccatgggaaagtt 10608319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Complemental strand, 14337607 - 14337557
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  14337607 gaggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 14337557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 15082672 - 15082638
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  15082672 ggtgccatttaatttgggaaaggagagttctttcc 15082638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 22580597 - 22580631
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  22580597 ggtgccatttaatttgggaaaggagagttctttcc 22580631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 22587083 - 22587117
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  22587083 ggtgccatttaatttgggaaaggagagttctttcc 22587117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 33479972 - 33479938
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  33479972 ggtgccatttaatttgggaaaggagagttctttcc 33479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 116
Target Start/End: Complemental strand, 1035452 - 1035351
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||| |||||  | |||||||||| |||||||||| |  |  ||  | |||||| ||||||| || ||||| | ||||||||||||    
T  1035452 aggtgccatttaatttggaaaaggttaattttttcccatcatgggaaagatttttttgaccgttagatcaaatgagaaacacattttaatcatactctct 1035353  T
Q  115 ca 116  Q
    ||    
T  1035352 ca 1035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 7532489 - 7532440
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| ||||||||||||||||||||| || |||  ||||||||||||||    
T  7532489 aggtggcatttaatttgggaaaggagacttctttttcaccatgggaaagt 7532440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 89
Target Start/End: Complemental strand, 4311211 - 4311163
Alignment:
Q  41 agttttttcccaccatgggaaagttgatcatgttcattagattaaatga 89  Q
    |||||||||||||||||||| ||||||| |||| |||| ||| ||||||    
T  4311211 agttttttcccaccatgggagagttgattatgtgcattggatcaaatga 4311163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 9574619 - 9574571
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||| ||||||||||||| || ||||||||||| |||||||    
T  9574619 ggtggcatttaacttgggaaaggagacttctttcccaccataggaaagt 9574571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 118
Target Start/End: Complemental strand, 25067884 - 25067796
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaac 118  Q
    |||||||||| | || ||||||||||| ||||||||| |  ||| |||| ||| |||| || |||||| |||||| ||| |||||||||    
T  25067884 tgggaaaggatatttgtttcccaccataggaaagttgtttttgtccattggatcaaataagaaatacaatcttattatagtctctcaac 25067796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 210 - 58
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||| ||||||||||||    
T  210 gaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgattatgttcattagattaaatgaggaacatattcctatcatactctc 111  T
Q  114 tcaaccactagattatt--ttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||||  ||||| |||||||| ||| |||||||||||||||    
T  110 tcaaccactagattattttttttatactatctttcacactctctctttcatgt 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 21472002 - 21471853
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  21472002 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 21471903  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  21471902 aaccactagattatttttttatactatctttcacactctctctttcatgt 21471853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 21471016 - 21471166
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| |||||||||||||    
T  21471016 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctct 21471115  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    || ||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  21471116 cagccactagattatttttttatactatctttcacactctctctttcatgt 21471166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 38834385 - 38834536
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 113  Q
    ||||||||||||||||||||||||||| ||  |||||||||| ||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  38834385 gaggtgccatttaatttgggaaaggagggtactttcccaccacgggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctc 38834484  T
Q  114 tcaaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38834485 tcaaccactagattatttttttatactatctttcacactctctctttcatgt 38834536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 134
Target Start/End: Original strand, 37547997 - 37548116
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  37547997 aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 37548096  T
Q  115 caaccactagattatttttt 134  Q
    ||||||||||||||||||||    
T  37548097 caaccactagattatttttt 37548116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 14573261 - 14573374
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  14573261 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctc 14573360  T
Q  116 aaccactagattatt 130  Q
    || ||||||||||||    
T  14573361 aa-cactagattatt 14573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 4479750 - 4479603
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  4479750 ggtgccatttaatttgggaaaggagagttctttctcaccatgggaaagttaatcatgtccattagattaaatgaggaacatattcttatcatactctctc 4479651  T
Q  116 aaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
     | ||||| ||||||||||| | |||||| || | ||||||||||||||    
T  4479650 ca-cactaaattattttttatattatctttcatcatctctctttcatgt 4479603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 38834685 - 38834566
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||| | |||  |||||||||||||    
T  38834685 aggtgccatttaatttgggaaaggagagttttttcctaccgtgggaaagttgatcatgtccattagattaaatgaagaacatatttctatcatactctct 38834586  T
Q  115 caaccactagattatttttt 134  Q
    ||||||||||||||||||||    
T  38834585 caaccactagattatttttt 38834566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 13134318 - 13134436
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||| | |||  ||||||||||| ||    
T  13134318 ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattaaattaaatgaggaacatatttctatcatactctatc 13134417  T
Q  116 aaccactagattatttttt 134  Q
    |||||||||||||||||||    
T  13134418 aaccactagattatttttt 13134436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 15 - 133
Target Start/End: Complemental strand, 14574048 - 14573930
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| | |||||||||||||||| || | |||| |||||||||||||    
T  14574048 aggtgccatttaatttgggaaaggagagttctttcccaccataagaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctct 14573949  T
Q  115 caaccactagattattttt 133  Q
    ||||||||||||| |||||    
T  14573948 caaccactagattgttttt 14573930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 33433208 - 33433160
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  33433208 ggtgccgtttaatttgagaaaggagagttctttcccaccatgggaaagt 33433160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 96
Target Start/End: Complemental strand, 30486964 - 30486909
Alignment:
Q  41 agttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatac 96  Q
    |||||||||||||||||||||||||||| |||| |||| ||| |||||| ||||||    
T  30486964 agttttttcccaccatgggaaagttgattatgtgcattggatcaaatgaagaatac 30486909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 5276463 - 5276513
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  5276463 gaggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagt 5276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 1164825 - 1164788
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttccca 52  Q
    |||||||||||||||||||||||||||||| |||||||    
T  1164825 aggtgccatttaatttgggaaaggagagttctttccca 1164788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 16426553 - 16426602
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  16426553 ggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaagtt 16426602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 40992222 - 40992271
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||||||||||   ||||||||| ||||||||||||||    
T  40992222 ggtgccatttaatttgggaaaggtttgttttttcctaccatgggaaagtt 40992271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 41984726 - 41984774
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| ||||||||||||||||||  ||||||||| |||||||||||||    
T  41984726 aggtggcatttaatttgggaaaggctagttttttctcaccatgggaaag 41984774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 2650227 - 2650278
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||| |||||||||||||| |||| |||||||||| ||||| ||||||    
T  2650227 gaggtgccgtttaatttgggaaatgagacttttttcccatcatggaaaagtt 2650278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 156
Target Start/End: Original strand, 4478936 - 4478990
Alignment:
Q  101 ttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 156  Q
    ||||||||||||||| || |||||||||||||||| |||||||| || ||||||||    
T  4478936 ttatcatactctctccac-actagattattttttatactatctttcatcctctctc 4478990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 11256766 - 11256696
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  11256766 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 11256696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 24727820 - 24727870
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||||||||| | | |||||||||| ||||| ||||||    
T  24727820 aggtgccatttaatttgggaaagcacacttttttcccatcatggaaaagtt 24727870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 58
Target Start/End: Complemental strand, 24741853 - 24741811
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgg 58  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  24741853 ggtgccgtttaatttgggaaagaagacttttttcccaccatgg 24741811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 30545484 - 30545434
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||||||||||  |||| |||||||  |||||||||||    
T  30545484 aggtgccatttaatttgggaaagggaagttgtttcccatgatgggaaagtt 30545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 4478850 - 4478899
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  4478850 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 4478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 19521966 - 19521917
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  19521966 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 19521917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 41043378 - 41043329
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||| ||||    
T  41043378 gaggtggcatttaatttgggaaaggctagttttttcccatcatggaaaag 41043329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 30544727 - 30544779
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgat 68  Q
    ||||||||||||||||||||| |  |||| |||||||  ||||||||||||||    
T  30544727 ggtgccatttaatttgggaaatggaagttgtttcccatgatgggaaagttgat 30544779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 43737729 - 43737878
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  43737729 ggtgccatttaatttgggaaagtagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctc 43737828  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||| |||||||||||||||| |||  ||||||||| ||||    
T  43737829 aaccactagattatttttttacactatctttcacattctctctttgatgt 43737878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 16270207 - 16270357
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  16270207 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16270306  T
Q  116 aaccactagatta--ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||  ||||||| |||||||| ||| ||| |||||||||||    
T  16270307 aaccactagattattttttttatactatctttcacactccctctttcatgt 16270357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 23440913 - 23440795
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  23440913 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatactctctc 23440814  T
Q  116 aaccactagattatttttt 134  Q
    |||||||||||||||||||    
T  23440813 aaccactagattatttttt 23440795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 162
Target Start/End: Complemental strand, 48972494 - 48972346
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  48972494 aggtgccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 48972395  T
Q  115 caaccactagattatt-ttttacactatcttccaccctctctctttcat 162  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||    
T  48972394 caaccactagattatttttttatactatctttcacactctctctttcat 48972346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 9947995 - 9948144
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  9947995 ggtgccatttaatttgggaaagaaaagttctttcccaccatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 9948094  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  9948095 aaccactagattatttttttatactatctttcacactctctctttcatgt 9948144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 9948935 - 9948807
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||| ||    
T  9948935 ggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctatc 9948836  T
Q  116 aaccactagattattttttacactatctt 144  Q
    |||||||||||||||||||| ||||||||    
T  9948835 aaccactagattattttttatactatctt 9948807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 23440617 - 23440765
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| ||||| || |||| ||||||||| |||| |||||||||||||||| || | |||| ||||||||||||||    
T  23440617 ggtgccatttaatttgggaaaggagagttctttccaactatggaaaagttgattatgtccattagattaaatgagaaacatattcctatcatactctctc 23440716  T
Q  116 aaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  23440717 aaccactagattattttttatactatctttcacactctctctttcatgt 23440765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 51974436 - 51974586
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||| | |||| |||||||||||||    
T  51974436 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtctattagattaaatgaagaacatattcctatcatactctct 51974535  T
Q  115 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||| ||||||||| ||||||| |||||||| |||  ||||||||||||||    
T  51974536 caactactagattatttttttatactatctttcacattctctctttcatgt 51974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 16271196 - 16271047
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||| ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  16271196 ggtgccatttaatttaggaaaggagagttctttctcatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16271097  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| ||||| || ||| |||||||||||||||    
T  16271096 aaccactagattatttttttatactatatttcacactctctctttcatgt 16271047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 30 - 172
Target Start/End: Original strand, 6075988 - 6076127
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 129  Q
    ||||||||||||||| ||| | |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||    
T  6075988 tgggaaaggagagttcttttctaccatgagaaagttgatcatgtccattagattaaatgaggaatacatttttatcatagtctctcaa-cactaaattat 6076086  T
Q  130 tttttacactatcttccaccctctctctttcatgttctcacac 172  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  6076087 tttttacactatcttcca--ctctctctttcatgttctcacac 6076127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 43738027 - 43737908
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 114  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||| |||||    
T  43738027 aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatattctct 43737928  T
Q  115 caaccactagattatttttt 134  Q
    ||||||||||||||||||||    
T  43737927 caaccactagattatttttt 43737908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 48971705 - 48971862
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  48971705 ggtgtcatttaatttgggaaaggagagttctttcccacaatgagaaagttgatcatataaattagattaaatgaggaacatattcctatcatactctctc 48971804  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 172  Q
    |||||||| |||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  48971805 aaccactatattatttttttatactatctttcacactctctctttcatgttcccacac 48971862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 51975275 - 51975126
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||  |||||||||||||||||| | |||| |||||||||||||     
T  51975275 ggtgccatttaatttgggaaaggagagttctttttcactatgggaaagttgatcatgtcaattagattaaatgaggaacatattcctatcatactctctt 51975176  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  51975175 aaccactagattatttttttatactatctttcacactctctctttcatgt 51975126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 193850 - 193997
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||| ||||||||||||| | |||||||||||||||||||    
T  193850 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttaatcatgtccattaaattaaatgaggaacatattcttatcatactctctc 193949  T
Q  116 aaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
     | ||||||||||||||||| | |||||| || | ||||||||||||||    
T  193950 ca-cactagattattttttatattatctttcatcatctctctttcatgt 193997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 50827138 - 50826992
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || | ||| |||||||||||||||    
T  50827138 ggtgccatttaatttgagaaaggagagttttt-cccaccatgggaaagttgatcatgtccattagattaaatgagaaacatatttttatcatactctctc 50827040  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcat 162  Q
    |||||||| |||| ||||||| | |||||| ||| |||||||||||||    
T  50827039 aaccactaaattatttttttatagtatctttcacactctctctttcat 50826992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 38930312 - 38930469
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||| ||||||||||||||||||| |||| |||  ||||||||||||||||||||| | ||||| ||||||| ||||| | |||| ||||||||||||||    
T  38930312 ggtgtcatttaatttgggaaaggaaagttctttttcaccatgggaaagttgatcatatccattaaattaaataaggaacatattcctatcatactctctc 38930411  T
Q  116 aaccactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 172  Q
    ||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  38930412 aaccactagattatttttttatactatctttcacactctctctttcatgttcccacac 38930469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 12925897 - 12926020
Alignment:
Q  40 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 139  Q
    ||||||||| ||||||| | ||||||||| |||| |||||||||||||| |||||||||||||||  ||||||||||| || ||||||||||||||||||    
T  12925897 gagtttttttccaccatagaaaagttgataatgtccattagattaaatgtggaatacattcttatactactctctcaa-cattagattattttttacact 12925995  T
Q  140 atcttccaccctctctctttcatgt 164  Q
    |||||||||||||||||||||||||    
T  12925996 atcttccaccctctctctttcatgt 12926020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 30 - 164
Target Start/End: Complemental strand, 6076901 - 6076767
Alignment:
Q  30 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 129  Q
    ||||||| ||||||| |||||||| |||| |||||||||||||| ||||| |||||||||| || | |||| ||||||||||||||||||| ||||||||    
T  6076901 tgggaaatgagagttctttcccactatggaaaagttgatcatgtccattatattaaatgagtaacatattcctatcatactctctcaaccaatagattat 6076802  T
Q  130 tttttacactatcttccaccctctctctttcatgt 164  Q
    |||||| |||||||| ||| |||||||||||||||    
T  6076801 tttttatactatctttcacactctctctttcatgt 6076767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 20794313 - 20794436
Alignment:
Q  40 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 139  Q
    ||||||||| ||||||| ||||||||||| |||| |||||||||||||| |||| ||||||||||   |||||||||| || ||||||||||||||||||    
T  20794313 gagtttttttccaccataggaaagttgataatgtgcattagattaaatgtggaacacattcttatatcactctctcaa-cattagattattttttacact 20794411  T
Q  140 atcttccaccctctctctttcatgt 164  Q
    || ||||||||||||||||||||||    
T  20794412 attttccaccctctctctttcatgt 20794436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 34 - 164
Target Start/End: Original strand, 47334217 - 47334347
Alignment:
Q  34 aaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-tt 132  Q
    ||||| ||||| |||||||| |||||||||||||| |||| |||||||||||||||| || | || |||||| ||||||||||| |||||||||||| ||    
T  47334217 aaaggggagttgtttcccacaatgggaaagttgattatgtccattagattaaatgagaaacaaatccttatcctactctctcaa-cactagattattgtt 47334315  T
Q  133 ttacactatcttccaccctctctctttcatgt 164  Q
    ||||||||||||||||| ||||||||||||||    
T  47334316 ttacactatcttccaccatctctctttcatgt 47334347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 51 - 164
Target Start/End: Original strand, 17050488 - 17050600
Alignment:
Q  51 caccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccc 150  Q
    |||||||||||||||||| ||||||||||||||||||  || | ||||||||||  |||||||||||  | |||||||||||||||||||||||||||||    
T  17050488 caccatgggaaagttgataatgttcattagattaaatatggtacacattcttatactactctctcaat-attagattattttttacactatcttccaccc 17050586  T
Q  151 tctctctttcatgt 164  Q
    ||||||||||||||    
T  17050587 tctctctttcatgt 17050600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 31390847 - 31390726
Alignment:
Q  40 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 139  Q
    ||||| ||||||||||||||||||||||| |||| |||| || ||||||||||| ||||| ||||| ||||||||||| || ||||||||||||||||||    
T  31390847 gagttctttcccaccatgggaaagttgattatgtccattggaataaatgaggaacacatttttatcctactctctcaa-cattagattattttttacact 31390749  T
Q  140 atcttccaccctctctctttcatgt 164  Q
    ||||| ||  |||||||||||||||    
T  31390748 atctttca--ctctctctttcatgt 31390726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 164
Target Start/End: Complemental strand, 38931293 - 38931145
Alignment:
Q  18 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 117  Q
    |||||||||||||||||||| |||||| ||| | |||||||||||||||||||| | ||||| ||||||| || || | |||  ||||||||||||||||    
T  38931293 tgccatttaatttgggaaagaagagttcttttctaccatgggaaagttgatcatatccattaaattaaataagaaacatatttctatcatactctctcaa 38931194  T
Q  118 ccactagatta--ttttttacactatcttccaccctctctctttcatgt 164  Q
    |||||| ||||  ||||||| | |||||| ||| |||||||||||||||    
T  38931193 ccactatattattttttttatattatctttcacactctctctttcatgt 38931145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 47334948 - 47334798
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||| |||||| | ||||||| | ||||| ||||||||||| ||||||||||| |||| |||| ||||||||||| || | ||  ||||| |||||||||    
T  47334948 ggtggcatttagtatgggaaaagggagttgtttcccaccataggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctc 47334849  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctctttcatgtt 165  Q
    |  ||||| ||  || ||||||||||||||||||| |||||||||| ||||    
T  47334848 atacactatatcgttgttttacactatcttccaccatctctctttcttgtt 47334798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 27888701 - 27888765
Alignment:
Q  46 tttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatact 110  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||    
T  27888701 tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatact 27888765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 6076636 - 6076687
Alignment:
Q  177 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccat 228  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  6076636 tttgtttgatccttgaaaatggtacattaacaagttttccggcagcaaccat 6076687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 1012546 - 1012596
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  1012546 aggtgccgtttaatttgggaaaggagatttttttcccaccatgggaaagtt 1012596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 40649580 - 40649516
Alignment:
Q  51 caccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||||||||||||||||| |||| |||||||||||||| |||| ||||||||||  |||||||||    
T  40649580 caccatgggaaagttgataatgtccattagattaaatgtggaacacattcttatactactctctc 40649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 51987826 - 51987875
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  51987826 aggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 51987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 46133720 - 46133807
Alignment:
Q  43 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattt 131  Q
    ||||| ||||||||||||||||  || |||| ||| ||||||||||||||  ||||||||||  ||||||||||| || ||||||||||    
T  46133720 tttttccccaccatgggaaagtgaattatgtccatcagattaaatgaggagcacattcttatactactctctcaa-cattagattattt 46133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 164
Target Start/End: Original strand, 27418222 - 27418311
Alignment:
Q  75 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 164  Q
    |||||||| |||||| ||  ||| |||| | |||||||||| | ||||| |||||||| ||||||||||||||   ||||||||||||||    
T  27418222 cattagatcaaatgaagagcacactcttgttatactctctcgaacactatattattttatacactatcttccataatctctctttcatgt 27418311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 35616824 - 35616775
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  35616824 aggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagt 35616775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 45064685 - 45064734
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||||||||||||||||||||   |||||||||||| |||||||||||    
T  45064685 aggtgccatttaatttgggaaagattagttttttcccatcatgggaaagt 45064734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 62
Target Start/End: Complemental strand, 49611607 - 49611562
Alignment:
Q  17 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 62  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||    
T  49611607 gtgccatttaatttgggaaaggctagttttttcccatcatgggaaa 49611562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 8560839 - 8560887
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||||||||||||||||| || ||||||| |||||||||||    
T  8560839 ggtgacatttaatttgggaaaggagacttctttcccatcatgggaaagt 8560887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 49610706 - 49610754
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  49610706 ggtgccattttatttgggaaagaagacttttttccctccatgggaaagt 49610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 51988512 - 51988464
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||||    
T  51988512 ggtggcatttaatttgggaaaggagacttcttttccaccatgggaaagt 51988464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 7219068 - 7219138
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||||||| ||||| ||||||| ||| || |||||| ||||||||| || || |||||||||||||    
T  7219068 attagattaaatgaagaatatattcttaacatgctttctcaa-cactagatttttcttcacactatcttcca 7219138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 51247888 - 51247958
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  51247888 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 51247958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 51248509 - 51248439
Alignment:
Q  76 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||| ||| ||| | ||||||| ||||||||||||| ||||||||| || || |||||||||||||    
T  51248509 attagattaagtgaagaacatattcttaacatactctctcaa-cactagatttttcttcacactatcttcca 51248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 1013521 - 1013471
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||| |||||||||||||||||||  ||| ||| ||||||||||||||||    
T  1013521 aggtgtcatttaatttgggaaaggaatgttattttccaccatgggaaagtt 1013471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Original strand, 16270901 - 16270935
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  16270901 ggtgccatttaatttgggaaaggagagttctttcc 16270935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 50
Target Start/End: Complemental strand, 38930608 - 38930574
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcc 50  Q
    ||||||||||||||||||||||||||||| |||||    
T  38930608 ggtgccatttaatttgggaaaggagagttctttcc 38930574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 45065435 - 45065385
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    |||||||||||||||||| ||| |   ||||||||||||||||||||||||    
T  45065435 aggtgccatttaatttggaaaaagcttgttttttcccaccatgggaaagtt 45065385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Complemental strand, 48870795 - 48870753
Alignment:
Q  22 atttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||| |||||||| |||| ||||||||||||||||||||||    
T  48870795 atttaacttgggaaatgagacttttttcccaccatgggaaagt 48870753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 147
Target Start/End: Original strand, 37725437 - 37725509
Alignment:
Q  74 tcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 147  Q
    |||||||||||| ||| ||| | ||||||| ||||||||||||| ||||||||| || || ||||||| |||||    
T  37725437 tcattagattaagtgaagaacatattcttaacatactctctcaa-cactagatttttcttcacactattttcca 37725509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 194749 - 194701
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  194749 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 194701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Complemental strand, 8561785 - 8561737
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||| |||||||||||||||||   |||||||||||| ||||||||||    
T  8561785 aggtgacatttaatttgggaaagactagttttttcccatcatgggaaag 8561737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 107
Target Start/End: Complemental strand, 11032268 - 11032176
Alignment:
Q  15 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcat 107  Q
    ||||| |||||||  ||||||||| || |  ||||||||||||||||||||||   ||  ||||||||||| | | ||| |||||||||||||    
T  11032268 aggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagattaagtaatgaacacattcttatcat 11032176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Original strand, 14924681 - 14924721
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  14924681 tttaatttgggaaagggaagttgtttcccaccatgggaaag 14924721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 63
Target Start/End: Complemental strand, 14925383 - 14925343
Alignment:
Q  23 tttaatttgggaaaggagagttttttcccaccatgggaaag 63  Q
    ||||||||||| ||||| |||| ||||||||||||||||||    
T  14925383 tttaatttggggaaggaaagttgtttcccaccatgggaaag 14925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 37874064 - 37874112
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 64  Q
    |||| ||||||| |||||||| |||| || |||||||||||||||||||    
T  37874064 ggtgacatttaacttgggaaatgagacttctttcccaccatgggaaagt 37874112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 48869767 - 48869815
Alignment:
Q  14 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 62  Q
    |||||| ||||||| ||||||||||||| || ||| |||||||||||||    
T  48869767 gaggtgacatttaacttgggaaaggagacttcttttccaccatgggaaa 48869815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 159
Target Start/End: Complemental strand, 9306 - 9162
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 115  Q
    |||| |||||||||||| |||||||||||||||  |||||||| |||||| ||||||| ||||||||||||||| ||| | |||||||||||||||||||    
T  9306 ggtgtcatttaatttggaaaaggagagttttttttcaccatggaaaagttcatcatgtccattagattaaatgatgaacatattcttatcatactctctc 9207  T
Q  116 aaccactagattatt-ttttacactatcttccaccctctctcttt 159  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||    
T  9206 aaccactagattatttttttatactatctttcacactctctcttt 9162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 155
Target Start/End: Original strand, 5344 - 5457
Alignment:
Q  41 agttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacacta 140  Q
    |||||| |||||| || ||||||| ||| || | |||||||||||||||| || ||||||||||| |||||| || |  ||||||||||||||||   ||    
T  5344 agttttctcccactataggaaagtagattatatccattagattaaatgagaaacacattcttatcctactctttcca-tactagattattttttatgata 5442  T
Q  141 tcttccaccctctct 155  Q
    |||||||| ||||||    
T  5443 tcttccacactctct 5457  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 17339 - 17388
Alignment:
Q  16 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 65  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||||    
T  17339 ggtgccatttaatttggaaaaggcttgttttttcccaccatgggaaagtt 17388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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