View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10041_high_8 (Length: 371)
Name: NF10041_high_8
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10041_high_8 |
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Alignment Details
Target: chr5 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 7 - 334
Target Start/End: Complemental strand, 17428775 - 17428448
Alignment:
| Q |
7 |
gaagcataggaagaaaaagaaggtcagagcaagaattattatcacaaaatatgggaagttatttgttacaatcaaatgtagggtcacttccttcaagtca |
106 |
Q |
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| T |
17428775 |
gaagcatgggaagaaaaagaaggtcagagcaagaattattatcacaaaatatgggaagttatttgttacaatcaaatgtagggtcacttccttcaagtca |
17428676 |
T |
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| Q |
107 |
tgcttcaaatacggcagcgttttggatggtaactggtaatgggaaccaaggtgttaatgttaatggtggtaatggaaatgatccaatttgggcaattcct |
206 |
Q |
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| T |
17428675 |
tgcttcaaatacggcagcgttttggatggtaactggtaatgggaaccaaggtgttaatgttaatggtggtaatggaaatgatccaatttgggcaattcct |
17428576 |
T |
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| Q |
207 |
tctgttgggaataatggtttgtatagaggagctatgacatctcctaatggatttcatttcatgaattttgctgcatctccaatgaatcttatgccaggaa |
306 |
Q |
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| T |
17428575 |
tctgttgggaataatggtatgtatagaggagctatgacatctcctaatggatttcatttcatgaattttgctgcatctccaatgaatcttatgccaggaa |
17428476 |
T |
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| Q |
307 |
gtcagttaggttcaggaatcgtcggcgg |
334 |
Q |
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| T |
17428475 |
gtcaattaggttcaggaatcgtcggcgg |
17428448 |
T |
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