View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10041_low_20 (Length: 368)
Name: NF10041_low_20
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10041_low_20 |
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Alignment Details
Target: chr2 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 16 - 362
Target Start/End: Original strand, 17357432 - 17357778
Alignment:
| Q |
16 |
tgatgaagagatcatttgcattctttagaagcttgaatttgatgagaatgagagatcgaaatcaagctgcgcgaccctcgagtaatcaacttcatcatat |
115 |
Q |
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| T |
17357432 |
tgatgaagagatcatttgcattctttagaagcttgaatttgatgagaatgagagatcgaaatcaagctgcacgaccctcgagtaatcaacttcatcatat |
17357531 |
T |
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| Q |
116 |
gatatcagagcgacgaagacgagagaagcttaatgacaattttcaagcacttagagcattacttcctcaaggaacaaaggtacgtactaaattgttaatc |
215 |
Q |
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| T |
17357532 |
gatatcagagcgacgaagacgagagaagcttaatgagaattttcaagcacttagagcattacttcctcaaggaacaaaggtacgtactaaattgttaatc |
17357631 |
T |
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| Q |
216 |
tcatcatgttgttttataatcaatgcattattatgtgtataaggaacaatgttctgaaaagtgagcaatgatcactagccgtcgagatttctaatgtcta |
315 |
Q |
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| T |
17357632 |
tcatcatgttgttttataatcaatgcattattatgtgtataaggaacaatgttttgaaaaatgagcaatgatcactagccgtcaagatttttaatgtcta |
17357731 |
T |
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| Q |
316 |
tgtaaatgcaatcgcataaatccaaatttttcttgcaaacgattata |
362 |
Q |
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| T |
17357732 |
tttaaatgcaatcgcataaatccgaatttttcttgcaaacgattata |
17357778 |
T |
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