View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10041_low_28 (Length: 356)
Name: NF10041_low_28
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10041_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 4 - 340
Target Start/End: Original strand, 40783269 - 40783614
Alignment:
| Q |
4 |
gagtttggtgttcctgattttagactcgagaaggcattatctgttggtgcaaaaattgttaggccttgatttgagttgttgagttgtgagttgattcggt |
103 |
Q |
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| T |
40783269 |
gagtttagtgttcctgattttagactcgagaaggcattatctgttggtgcaaaaattgttaggccttgatttgagttgttgagttgtgagttgattcggt |
40783368 |
T |
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| Q |
104 |
cggatacttgtgttgcttttagtagcttgatgaatgttgtgaattgtcctgccttttctaggactttggttatgtttaatggtcctgatggtgctggtga |
203 |
Q |
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| T |
40783369 |
cggatacttgtgttgcttttagtagcttgatgaatgttgtgaattgtcctgccttttctaggactttggttatgtttaatggtcctgatggtgctggtga |
40783468 |
T |
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| Q |
204 |
tatagctggttgagctgaaattctttgaaacaatgtcacaatgatgaatacgttg-nnnnnnngagaggaaagaaattgaatagcttagccattggtatg |
302 |
Q |
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| T |
40783469 |
tatagctggttgagctgaaattctttgaaacaatgtcacaatgatgaatacgttgagaaaaaagagaggaaagaaattgaatagcttagccattggtatg |
40783568 |
T |
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| Q |
303 |
aaaaaac--------tagaagaatgtgttttgtttgaagtggaatg |
340 |
Q |
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| T |
40783569 |
aaaaaactagaagattagaagaatgtgttttgtttgaagtggaatg |
40783614 |
T |
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