View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10041_low_46 (Length: 284)
Name: NF10041_low_46
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10041_low_46 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 32917586 - 32917842
Alignment:
| Q |
20 |
tgacacacagagaatacttgttccttatgtttaatgaacctacaaaatcatttgggaatacatgttccttatgttccttgttgtattgatttacaatgta |
119 |
Q |
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| T |
32917586 |
tgacacacagagaatacttgttccttatgtttaatgaacctacaaaatcatttgggaatacatgttccttatgttccttgttgtattgatttacaatgta |
32917685 |
T |
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| Q |
120 |
gtttctgttttgtatttgcattatgtagtttaagtgtgaacaagtcctttaagtgaagcaataaataaatagtccttgaagtttttcatgttgttgtaaa |
219 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32917686 |
gtttctgttttgtatttgcattatgtagttcaagtgtgaacaagtcctttaagtgaagcaataaataaatagtccttgaagtttttcatgttgttgtaaa |
32917785 |
T |
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| Q |
220 |
caagattttgcactatagtgtgcagactcatatttgaatatttctatgttctctgct |
276 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32917786 |
caagattttgcactatagtgtgcagactcatatttgaatatttctatgttctttgct |
32917842 |
T |
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