View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10041_low_72 (Length: 239)
Name: NF10041_low_72
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10041_low_72 |
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Alignment Details
Target: chr5 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 40924073 - 40924295
Alignment:
| Q |
1 |
aaatgtgaaaaaggacaacaatatagagaaggatgtggatgagaatgtaagaagagatcaagagagtgcaatgaagatagaaatggatgaaaacaagtga |
100 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40924073 |
aaatgtgaaaaaggacaacaatatagagaaggatgtgaatgagaatgtaagaagagatcaagagagtgcaatgaagatagaaatggatgaaaacaagtga |
40924172 |
T |
|
| Q |
101 |
agcataaaacacaaacgcctgtgaatgaagtgaatctagtatggaaaatgagaattggtatcatactttgtaatcttcatctaagaaactaacaaatcct |
200 |
Q |
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||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
40924173 |
agcataaaacacaaacgccagtgaatgaagcgaatctagtatggaaaatgagaattggtatcatactttgtgatcttcatctaagaaactaacaaatcct |
40924272 |
T |
|
| Q |
201 |
tcacagttgttgtaggttacgtt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
40924273 |
tcacagttgttgtaggttacgtt |
40924295 |
T |
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