View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10041_low_80 (Length: 231)
Name: NF10041_low_80
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10041_low_80 |
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Alignment Details
Target: chr2 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 19 - 215
Target Start/End: Original strand, 43181842 - 43182038
Alignment:
| Q |
19 |
tatatatgagcttaatgctaatcacaagaacacactaaccaccttttctttgtcctccccttcctttgaataacaacaggttggaatggtttatacaaag |
118 |
Q |
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| T |
43181842 |
tatatatgagcttaatgctaatcacaagaacacactaaccaccttttctttgtcctccccttcctttgaataacaacaggttggaatggtttatacaaag |
43181941 |
T |
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| Q |
119 |
atgttgctgttgctgtaacaaatttcctttcatcttcctaacaccacaaaagaggtccaatattcaaagcaatggtcaagattttgctgccattcat |
215 |
Q |
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| T |
43181942 |
atgttgctgttgctgtaacaaatttcctttcatcttcctaacaccacaaaagaggtccaatattcaaagcaatggtcaagattttgctgctattcat |
43182038 |
T |
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