View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10041_low_94 (Length: 206)
Name: NF10041_low_94
Description: NF10041
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10041_low_94 |
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Alignment Details
Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 40378762 - 40378702
Alignment:
| Q |
130 |
atcggatcttgtaattgcatgcatatcgccttcaattgattcaccctttaaccattcaatt |
190 |
Q |
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| T |
40378762 |
atcggatcttgtaattgcatgcatatcgccttcaattgattcaccctttaaccattcaatt |
40378702 |
T |
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Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 40378878 - 40378839
Alignment:
| Q |
14 |
caaagggttaggttttcggcaatctcctccaaggtaccaa |
53 |
Q |
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| T |
40378878 |
caaagtgttaggttttcggcaatctcctccaaggtaccaa |
40378839 |
T |
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