View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10042_high_6 (Length: 345)
Name: NF10042_high_6
Description: NF10042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10042_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 1 - 337
Target Start/End: Original strand, 32024988 - 32025324
Alignment:
| Q |
1 |
tgttgatttcctttgtctgtgctaactagttcggtaattagtgattcagtggtaattactttgattgttcttgtggtaacaagcactgagggaattagtt |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
32024988 |
tgttgatttcctttgtctgtgctaactagttcggtaattagtgattcagtggtaattactttgattgttctcgtggtaacaagcactgagggaattagtt |
32025087 |
T |
|
| Q |
101 |
agtaattagtagagtagagattctaattaatggaaggaagtagctagatcccactaactaaatagagctactcaactacttcgaattccttctcattcta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32025088 |
agtaattagtagagtagagattctaattaatggaaggaagtagctagatcccactaactaaatagagctactcaactacttcgaattccttctcattcta |
32025187 |
T |
|
| Q |
201 |
tagaagaagtccaataagcaagctaatcattagaagagtttactaaacctagctatttagtttgatcggctcacttgatagaaattattcagttactcgg |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32025188 |
tagaagaagtccaataagcaagctaatcattagaagagtttactaaacctagctatttagtttgatcggctcacttgatagaaattattcagttactcgg |
32025287 |
T |
|
| Q |
301 |
agttagtgatagattgggacgagacacaggttctgct |
337 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||| |
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| T |
32025288 |
agttagtgatagattgggacgagacactgggtctgct |
32025324 |
T |
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