View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10043_low_1 (Length: 295)

Name: NF10043_low_1
Description: NF10043
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10043_low_1
NF10043_low_1
[»] chr5 (43 HSPs)
chr5 (123-225)||(35779350-35779452)
chr5 (154-295)||(13239730-13239871)
chr5 (154-295)||(9049390-9049530)
chr5 (154-295)||(25412740-25412880)
chr5 (154-289)||(28278301-28278436)
chr5 (154-295)||(42428478-42428619)
chr5 (154-289)||(213450-213585)
chr5 (13-77)||(35779504-35779568)
chr5 (154-289)||(40147246-40147381)
chr5 (154-291)||(13488186-13488323)
chr5 (154-295)||(16452059-16452200)
chr5 (154-295)||(39468597-39468738)
chr5 (154-291)||(42426283-42426420)
chr5 (171-295)||(42310000-42310124)
chr5 (154-289)||(38746990-38747125)
chr5 (154-295)||(533748-533889)
chr5 (202-295)||(8566042-8566135)
chr5 (181-295)||(13695766-13695880)
chr5 (156-295)||(30182567-30182706)
chr5 (154-295)||(538004-538145)
chr5 (202-295)||(3075754-3075847)
chr5 (206-295)||(5887516-5887605)
chr5 (176-293)||(16641007-16641127)
chr5 (154-295)||(28750703-28750844)
chr5 (154-295)||(33831659-33831800)
chr5 (202-289)||(27637709-27637796)
chr5 (207-295)||(19806362-19806449)
chr5 (154-295)||(31182952-31183091)
chr5 (154-295)||(32636803-32636944)
chr5 (154-289)||(5058032-5058165)
chr5 (203-295)||(13343039-13343132)
chr5 (154-253)||(37439163-37439261)
chr5 (202-295)||(30683020-30683110)
chr5 (181-268)||(316769-316855)
chr5 (156-295)||(36074093-36074234)
chr5 (153-215)||(16137074-16137137)
chr5 (154-207)||(16135490-16135544)
chr5 (196-270)||(22536380-22536453)
chr5 (196-270)||(29751250-29751324)
chr5 (154-253)||(10700696-10700794)
chr5 (203-243)||(30802859-30802899)
chr5 (171-242)||(32609567-32609639)
chr5 (181-295)||(35616148-35616262)
[»] chr2 (40 HSPs)
chr2 (171-295)||(13121748-13121870)
chr2 (154-295)||(5723304-5723444)
chr2 (153-295)||(7815320-7815462)
chr2 (154-295)||(24398034-24398178)
chr2 (154-295)||(2334466-2334607)
chr2 (154-289)||(45726914-45727049)
chr2 (202-295)||(34139867-34139960)
chr2 (154-295)||(36318057-36318198)
chr2 (154-295)||(36773541-36773682)
chr2 (154-295)||(38312219-38312360)
chr2 (154-295)||(42362331-42362472)
chr2 (154-295)||(6595054-6595196)
chr2 (181-291)||(33648153-33648264)
chr2 (154-295)||(723792-723933)
chr2 (202-295)||(11690480-11690573)
chr2 (154-295)||(17057417-17057558)
chr2 (154-295)||(17085400-17085541)
chr2 (154-295)||(29867848-29867989)
chr2 (154-289)||(35446932-35447067)
chr2 (156-295)||(36205715-36205853)
chr2 (154-253)||(26353205-26353304)
chr2 (171-295)||(11049529-11049657)
chr2 (202-295)||(24885640-24885733)
chr2 (202-295)||(33162546-33162639)
chr2 (154-295)||(36988124-36988265)
chr2 (157-289)||(1631783-1631915)
chr2 (154-295)||(17490196-17490331)
chr2 (154-288)||(42288158-42288292)
chr2 (156-295)||(4503183-4503322)
chr2 (202-295)||(11151687-11151780)
chr2 (202-295)||(14633922-14634015)
chr2 (156-295)||(45099733-45099872)
chr2 (181-295)||(30218120-30218234)
chr2 (156-295)||(30833324-30833464)
chr2 (156-295)||(4484380-4484520)
chr2 (179-254)||(4561109-4561183)
chr2 (154-295)||(11067284-11067425)
chr2 (202-286)||(14202501-14202585)
chr2 (181-269)||(42261561-42261648)
chr2 (196-270)||(6266695-6266769)
[»] chr4 (68 HSPs)
chr4 (202-295)||(48142474-48142567)
chr4 (154-295)||(54199954-54200095)
chr4 (154-295)||(56178685-56178826)
chr4 (153-289)||(2209698-2209835)
chr4 (154-289)||(27417013-27417148)
chr4 (154-293)||(36463437-36463576)
chr4 (154-289)||(40632430-40632565)
chr4 (154-295)||(5429658-5429799)
chr4 (154-295)||(26175684-26175825)
chr4 (154-295)||(31474129-31474271)
chr4 (154-295)||(34570462-34570603)
chr4 (154-295)||(36994503-36994644)
chr4 (154-289)||(46703485-46703621)
chr4 (154-295)||(9927506-9927647)
chr4 (154-295)||(37229769-37229911)
chr4 (155-295)||(4587937-4588078)
chr4 (203-295)||(47038507-47038598)
chr4 (154-295)||(48893686-48893831)
chr4 (202-295)||(53345196-53345289)
chr4 (154-289)||(8665393-8665528)
chr4 (154-289)||(35662426-35662561)
chr4 (154-295)||(48143021-48143163)
chr4 (158-289)||(54883005-54883136)
chr4 (154-248)||(26699490-26699585)
chr4 (154-283)||(379371-379500)
chr4 (202-295)||(12739646-12739739)
chr4 (202-295)||(12747852-12747945)
chr4 (154-295)||(24969091-24969232)
chr4 (154-287)||(26364223-26364356)
chr4 (154-295)||(52467402-52467543)
chr4 (154-289)||(50673895-50674029)
chr4 (154-291)||(6542227-6542366)
chr4 (154-289)||(8648124-8648259)
chr4 (154-289)||(12073377-12073512)
chr4 (181-295)||(12119517-12119632)
chr4 (154-295)||(3913427-3913568)
chr4 (202-295)||(5871799-5871892)
chr4 (154-289)||(21688233-21688369)
chr4 (154-295)||(37740604-37740745)
chr4 (202-295)||(52095458-52095551)
chr4 (203-295)||(55085462-55085553)
chr4 (154-289)||(6655941-6656076)
chr4 (154-295)||(12745484-12745625)
chr4 (154-295)||(29254473-29254614)
chr4 (154-295)||(29999854-29999995)
chr4 (157-269)||(21703886-21703999)
chr4 (154-290)||(45687230-45687367)
chr4 (154-289)||(41964400-41964536)
chr4 (177-290)||(46147462-46147575)
chr4 (210-295)||(5207946-5208031)
chr4 (171-240)||(50262766-50262835)
chr4 (154-295)||(51337043-51337184)
chr4 (171-295)||(5370148-5370276)
chr4 (154-253)||(12743973-12744071)
chr4 (154-253)||(12744095-12744193)
chr4 (154-253)||(12745362-12745460)
chr4 (181-295)||(32091457-32091571)
chr4 (154-288)||(41639412-41639546)
chr4 (221-295)||(29056337-29056411)
chr4 (202-295)||(52082753-52082846)
chr4 (181-242)||(44570441-44570502)
chr4 (224-295)||(13009549-13009620)
chr4 (181-295)||(22882826-22882940)
chr4 (181-295)||(22934490-22934604)
chr4 (202-288)||(41639249-41639335)
chr4 (179-269)||(44967903-44967992)
chr4 (181-295)||(33089857-33089971)
chr4 (181-229)||(34788850-34788898)
[»] chr3 (62 HSPs)
chr3 (154-289)||(30236110-30236245)
chr3 (154-295)||(40735362-40735503)
chr3 (181-295)||(5433951-5434067)
chr3 (154-295)||(45095143-45095283)
chr3 (154-289)||(46860459-46860594)
chr3 (154-295)||(5236504-5236645)
chr3 (154-295)||(7762244-7762385)
chr3 (154-295)||(29196434-29196576)
chr3 (154-295)||(40734477-40734618)
chr3 (154-295)||(44700526-44700667)
chr3 (153-295)||(51398793-51398935)
chr3 (154-295)||(32891082-32891224)
chr3 (154-295)||(44331524-44331665)
chr3 (154-295)||(7764446-7764584)
chr3 (154-295)||(22835050-22835191)
chr3 (155-295)||(5373210-5373353)
chr3 (154-289)||(34491197-34491332)
chr3 (202-289)||(43401898-43401985)
chr3 (153-289)||(49199516-49199653)
chr3 (202-294)||(51352206-51352298)
chr3 (154-289)||(54593689-54593824)
chr3 (154-295)||(760826-760967)
chr3 (154-295)||(4569931-4570072)
chr3 (202-295)||(9666562-9666656)
chr3 (154-295)||(19683937-19684078)
chr3 (154-295)||(31314424-31314565)
chr3 (154-289)||(6095647-6095782)
chr3 (156-295)||(5258194-5258334)
chr3 (202-295)||(23392005-23392098)
chr3 (154-291)||(37408441-37408578)
chr3 (202-295)||(53921599-53921692)
chr3 (156-295)||(23200188-23200326)
chr3 (154-295)||(29810847-29810988)
chr3 (202-289)||(43403841-43403928)
chr3 (202-289)||(47304236-47304323)
chr3 (154-253)||(46173379-46173477)
chr3 (156-295)||(5260373-5260513)
chr3 (156-295)||(9636176-9636316)
chr3 (154-295)||(16499009-16499149)
chr3 (154-295)||(29682338-29682479)
chr3 (202-295)||(39153457-39153550)
chr3 (154-295)||(9581262-9581402)
chr3 (156-295)||(23197989-23198127)
chr3 (202-289)||(41819619-41819706)
chr3 (202-253)||(28253363-28253414)
chr3 (181-295)||(35138781-35138895)
chr3 (202-288)||(36018838-36018924)
chr3 (222-295)||(26386597-26386670)
chr3 (202-295)||(29813042-29813135)
chr3 (177-289)||(31340272-31340384)
chr3 (218-269)||(54739065-54739116)
chr3 (181-286)||(8166532-8166636)
chr3 (224-295)||(2075174-2075246)
chr3 (179-294)||(26323147-26323262)
chr3 (202-242)||(32744532-32744572)
chr3 (196-270)||(6716504-6716577)
chr3 (196-270)||(54635129-54635202)
chr3 (224-253)||(25517091-25517120)
chr3 (181-295)||(40519273-40519382)
chr3 (204-253)||(55302079-55302127)
chr3 (202-253)||(4386876-4386925)
chr3 (207-255)||(25491069-25491116)
[»] chr8 (53 HSPs)
chr8 (202-295)||(30291585-30291679)
chr8 (154-295)||(34254379-34254519)
chr8 (154-295)||(15212765-15212906)
chr8 (154-295)||(8965739-8965880)
chr8 (154-295)||(34256555-34256695)
chr8 (154-291)||(3772175-3772312)
chr8 (154-295)||(4731637-4731778)
chr8 (182-295)||(27811257-27811370)
chr8 (154-295)||(40321059-40321200)
chr8 (154-289)||(4283509-4283644)
chr8 (154-295)||(42498172-42498314)
chr8 (202-295)||(18141800-18141892)
chr8 (154-295)||(33352129-33352270)
chr8 (171-291)||(1292528-1292648)
chr8 (157-289)||(42435042-42435174)
chr8 (171-295)||(44353772-44353896)
chr8 (154-289)||(18655385-18655520)
chr8 (177-291)||(19491770-19491884)
chr8 (154-295)||(43036402-43036543)
chr8 (154-286)||(30143328-30143460)
chr8 (156-291)||(9765728-9765863)
chr8 (154-295)||(12702682-12702828)
chr8 (171-295)||(31218235-31218360)
chr8 (202-284)||(1822282-1822364)
chr8 (202-284)||(1856727-1856809)
chr8 (156-295)||(17982631-17982771)
chr8 (202-289)||(10930295-10930382)
chr8 (154-289)||(40221730-40221865)
chr8 (154-285)||(40328768-40328900)
chr8 (202-295)||(1345467-1345560)
chr8 (156-295)||(1746269-1746408)
chr8 (154-295)||(3303718-3303859)
chr8 (154-295)||(5689250-5689391)
chr8 (202-295)||(10929778-10929871)
chr8 (202-255)||(10240173-10240226)
chr8 (157-289)||(11383971-11384102)
chr8 (171-293)||(3231860-3231984)
chr8 (181-295)||(11712076-11712191)
chr8 (156-295)||(19945409-19945550)
chr8 (201-295)||(41364942-41365036)
chr8 (202-295)||(6598951-6599044)
chr8 (202-295)||(6674404-6674497)
chr8 (154-295)||(41366662-41366803)
chr8 (156-295)||(44303832-44303973)
chr8 (202-290)||(18106174-18106262)
chr8 (154-214)||(3073921-3073981)
chr8 (171-243)||(4162528-4162600)
chr8 (239-286)||(8153752-8153799)
chr8 (202-295)||(4743300-4743392)
chr8 (196-270)||(25689959-25690032)
chr8 (179-253)||(29796395-29796469)
chr8 (202-295)||(41266947-41267041)
chr8 (203-295)||(33655402-33655493)
[»] chr7 (61 HSPs)
chr7 (154-295)||(26417295-26417436)
chr7 (154-295)||(47673991-47674132)
chr7 (154-295)||(23555018-23555160)
chr7 (154-295)||(1113636-1113777)
chr7 (154-295)||(30024780-30024921)
chr7 (154-295)||(31733017-31733158)
chr7 (154-289)||(22269958-22270093)
chr7 (154-295)||(4253576-4253718)
chr7 (154-295)||(8153321-8153462)
chr7 (154-295)||(48491558-48491699)
chr7 (154-295)||(29991033-29991173)
chr7 (154-289)||(4508754-4508889)
chr7 (171-289)||(2361037-2361155)
chr7 (154-295)||(4586140-4586281)
chr7 (154-295)||(27347796-27347937)
chr7 (154-295)||(36146456-36146597)
chr7 (154-295)||(43864223-43864364)
chr7 (157-289)||(29608722-29608854)
chr7 (154-289)||(34310764-34310899)
chr7 (156-295)||(35853893-35854032)
chr7 (169-295)||(31518774-31518900)
chr7 (177-295)||(47676207-47676325)
chr7 (202-295)||(12097955-12098048)
chr7 (154-295)||(14069881-14070022)
chr7 (154-295)||(14379909-14380050)
chr7 (157-295)||(23343954-23344092)
chr7 (202-295)||(24525992-24526086)
chr7 (154-295)||(38671270-38671411)
chr7 (154-287)||(23565109-23565245)
chr7 (154-289)||(3258980-3259115)
chr7 (154-289)||(6431956-6432091)
chr7 (154-289)||(8359364-8359500)
chr7 (158-295)||(18126623-18126760)
chr7 (154-295)||(31105441-31105582)
chr7 (154-295)||(41317482-41317623)
chr7 (154-295)||(19502156-19502298)
chr7 (185-253)||(22328470-22328538)
chr7 (154-285)||(48599382-48599513)
chr7 (154-295)||(41649059-41649199)
chr7 (177-253)||(2390304-2390379)
chr7 (181-295)||(3904692-3904807)
chr7 (185-295)||(4178753-4178863)
chr7 (154-295)||(496031-496172)
chr7 (154-240)||(32358102-32358188)
chr7 (154-295)||(48489410-48489551)
chr7 (210-295)||(5514113-5514198)
chr7 (181-253)||(36574591-36574663)
chr7 (202-295)||(4538636-4538729)
chr7 (196-250)||(24789865-24789919)
chr7 (157-249)||(2759248-2759339)
chr7 (154-253)||(5116626-5116725)
chr7 (154-253)||(31518925-31519022)
chr7 (202-295)||(1360249-1360342)
chr7 (196-270)||(20343901-20343974)
chr7 (202-295)||(48408781-48408874)
chr7 (154-231)||(6360000-6360077)
chr7 (202-289)||(4510644-4510731)
chr7 (202-289)||(4512486-4512573)
chr7 (263-295)||(24514918-24514950)
chr7 (202-253)||(28617184-28617233)
chr7 (162-213)||(38280867-38280919)
[»] chr1 (65 HSPs)
chr1 (154-295)||(3156844-3156985)
chr1 (154-295)||(4552685-4552826)
chr1 (154-295)||(49918329-49918470)
chr1 (177-295)||(928047-928166)
chr1 (154-295)||(31659217-31659358)
chr1 (153-295)||(196955-197097)
chr1 (154-295)||(834215-834356)
chr1 (182-295)||(10925202-10925315)
chr1 (154-289)||(19754479-19754615)
chr1 (154-295)||(45644402-45644544)
chr1 (154-295)||(50167223-50167364)
chr1 (154-289)||(193596-193731)
chr1 (154-289)||(11348683-11348818)
chr1 (154-289)||(13547137-13547272)
chr1 (153-289)||(37033119-37033256)
chr1 (154-295)||(37503605-37503743)
chr1 (154-289)||(47255388-47255523)
chr1 (154-289)||(37168282-37168418)
chr1 (154-289)||(47115156-47115292)
chr1 (154-295)||(8550835-8550976)
chr1 (202-295)||(13138072-13138163)
chr1 (154-295)||(28220274-28220415)
chr1 (154-295)||(28265602-28265743)
chr1 (202-289)||(37879007-37879094)
chr1 (154-289)||(42298023-42298158)
chr1 (154-289)||(7482278-7482414)
chr1 (177-291)||(41360897-41361011)
chr1 (154-292)||(44455142-44455280)
chr1 (154-295)||(28223469-28223610)
chr1 (202-295)||(46064897-46064990)
chr1 (154-289)||(19752670-19752806)
chr1 (154-289)||(13549048-13549183)
chr1 (154-295)||(20762650-20762792)
chr1 (206-289)||(29136232-29136315)
chr1 (202-289)||(34603561-34603648)
chr1 (181-292)||(37282767-37282877)
chr1 (154-295)||(37559916-37560058)
chr1 (154-295)||(1833501-1833642)
chr1 (154-295)||(13659384-13659525)
chr1 (154-295)||(15820286-15820427)
chr1 (202-295)||(50169306-50169399)
chr1 (202-287)||(8871144-8871229)
chr1 (154-289)||(31925755-31925890)
chr1 (154-295)||(3189309-3189450)
chr1 (154-295)||(3198126-3198267)
chr1 (154-295)||(3206965-3207106)
chr1 (154-295)||(3847169-3847310)
chr1 (154-242)||(22079348-22079437)
chr1 (181-253)||(3460717-3460789)
chr1 (154-295)||(16455601-16455741)
chr1 (156-291)||(23555315-23555450)
chr1 (203-291)||(44646881-44646969)
chr1 (203-291)||(44650260-44650348)
chr1 (154-253)||(30476494-30476592)
chr1 (181-239)||(1050519-1050577)
chr1 (181-242)||(4535556-4535617)
chr1 (156-253)||(13316402-13316498)
chr1 (154-237)||(2263022-2263106)
chr1 (203-253)||(918439-918487)
chr1 (181-295)||(9109495-9109609)
chr1 (202-253)||(36683712-36683762)
chr1 (181-243)||(6808483-6808545)
chr1 (196-270)||(9036421-9036494)
chr1 (202-253)||(35109496-35109545)
chr1 (182-214)||(48260373-48260405)
[»] chr6 (30 HSPs)
chr6 (154-295)||(5406248-5406388)
chr6 (154-295)||(5410573-5410713)
chr6 (154-295)||(4045402-4045544)
chr6 (154-295)||(9183079-9183220)
chr6 (154-289)||(5043612-5043747)
chr6 (154-289)||(21588916-21589051)
chr6 (154-289)||(21593649-21593784)
chr6 (154-295)||(5413442-5413582)
chr6 (154-295)||(31404723-31404863)
chr6 (202-289)||(17762975-17763062)
chr6 (154-287)||(2972987-2973120)
chr6 (154-295)||(28137456-28137597)
chr6 (154-287)||(3808756-3808890)
chr6 (154-295)||(26954334-26954474)
chr6 (156-295)||(2171582-2171720)
chr6 (154-289)||(17758008-17758143)
chr6 (154-295)||(33211233-33211374)
chr6 (177-295)||(3038974-3039092)
chr6 (156-295)||(30834586-30834726)
chr6 (177-289)||(22424896-22425010)
chr6 (156-295)||(16452379-16452519)
chr6 (202-270)||(16569037-16569106)
chr6 (154-289)||(26830171-26830307)
chr6 (154-295)||(33160400-33160542)
chr6 (177-240)||(603159-603222)
chr6 (206-253)||(16567218-16567265)
chr6 (196-270)||(16554873-16554946)
chr6 (196-270)||(16631429-16631502)
chr6 (196-270)||(27647865-27647938)
chr6 (156-270)||(3072809-3072924)
[»] scaffold0286 (1 HSPs)
scaffold0286 (156-295)||(11536-11675)
[»] scaffold0016 (2 HSPs)
scaffold0016 (154-295)||(114581-114722)
scaffold0016 (202-253)||(102453-102502)
[»] scaffold0002 (2 HSPs)
scaffold0002 (156-295)||(434511-434651)
scaffold0002 (181-269)||(490396-490483)
[»] scaffold0466 (1 HSPs)
scaffold0466 (154-289)||(7312-7447)
[»] scaffold0014 (1 HSPs)
scaffold0014 (206-289)||(80383-80466)
[»] scaffold0006 (1 HSPs)
scaffold0006 (154-295)||(149145-149286)
[»] scaffold0176 (1 HSPs)
scaffold0176 (154-289)||(18052-18186)
[»] scaffold0066 (1 HSPs)
scaffold0066 (154-295)||(20463-20604)
[»] scaffold0053 (1 HSPs)
scaffold0053 (181-241)||(25086-25146)
[»] scaffold0236 (1 HSPs)
scaffold0236 (225-295)||(10469-10540)
[»] scaffold1519 (1 HSPs)
scaffold1519 (156-295)||(895-1033)
[»] scaffold0491 (1 HSPs)
scaffold0491 (202-295)||(11258-11351)
[»] scaffold0219 (1 HSPs)
scaffold0219 (154-229)||(27490-27566)


Alignment Details
Target: chr5 (Bit Score: 99; Significance: 7e-49; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 123 - 225
Target Start/End: Complemental strand, 35779452 - 35779350
Alignment:
Q  123 gcccaaatttgatccacatcgcaaaagaggaatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaa 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35779452 gcccaaatttgatccacatcgcaaaagaggaatctctccaattcattgtcaataaatttttacaaagagaaaccaaaatgttacaagaaattatcttcaa 35779353  T
Q  223 caa 225  Q
    |||    
T  35779352 caa 35779350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 13239871 - 13239730
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||| |||||||||| |||||||||||||||    
T  13239871 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaa-aaaccctaatttcta 13239773  T
Q  254 tcatgttct-caatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| || | |||||||| ||||||||||||||||||||||||    
T  13239772 ccattttttccaatctcaccaatgaacaagacactcaatgatt 13239730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 9049390 - 9049530
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || ||||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  9049390 atctctccaatccactgtcaatgagttcttacaaagagatacaaaatggttacaagaaattagcttcaacaagctcacaaa-aacaaacactaatttcta 9049488  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||| ||| ||| ||||  ||| ||||||||||||| |||||    
T  9049489 tcattttcccaaactcactaatcaacaagacactcagtgatt 9049530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 25412880 - 25412740
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| ||||||||||||    
T  25412880 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 25412782  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | | ||| |||||||| ||||||||||||||||||||||||    
T  25412781 cccttttcccaatctcaccaatgaacaagacactcaatgatt 25412740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 28278436 - 28278301
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||||||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  28278436 atctctccaatccactatcaatgagtttttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccataatttcta 28278338  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  28278337 cccattttcccaatctcaccaatgaacaagacactca 28278301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 42428478 - 42428619
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| |||||||||| ||||| |||||||||    
T  42428478 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaa-aaaccataatttcta 42428576  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  42428577 cccattttcccaatctcaccaatgaacaagacactcaatgatt 42428619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 213585 - 213450
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  213585 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttaacaagctcacaaagaac-aaccctaatttcta 213487  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  213486 cccattttcccaatctcaccaatgaacaagacactca 213450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 35779568 - 35779504
Alignment:
Q  13 aaggtgatcaaacaagcgaagacaaaactacacgataaaggagaataaagaaaaatatgacaata 77  Q
    ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  35779568 aaggtgatcaaacaagcaaagacaaaacaacacgataaaggagaataaagaaaaatatgacaata 35779504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 40147381 - 40147246
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  40147381 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaac-aaccctaatttcta 40147283  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  40147282 cccattttcccaatctcaccaatgaacaagacactca 40147246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 13488323 - 13488186
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  13488323 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 13488225  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaat 291  Q
      ||| ||| |||||| | ||||||||||||||||||||    
T  13488224 cccattttcccaatcttaccaatgaacaagacactcaat 13488186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 16452200 - 16452059
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | | ||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||| |||||||||| | |||||||||    
T  16452200 atctctccaatccactatgaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaa-cttaatttcta 16452102  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  |||||||||||||||||||||||||||||||||    
T  16452101 cccatttttccaatctcatcaatgaacaagacactcaatgatt 16452059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 39468597 - 39468738
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||| ||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  39468597 atctctctaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 39468695  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||||||||||||    
T  39468696 cccattttcccaatctcactaatgaacaagacactcaatgatt 39468738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 291
Target Start/End: Original strand, 42426283 - 42426420
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||| |||||||||| |||||||||  ||||||||||| ||||||||||||||    
T  42426283 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaac-aaccctaatttcta 42426381  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaat 291  Q
      ||| |||||||||||| ||||||||||||||||||||    
T  42426382 cccattttctcaatctcaccaatgaacaagacactcaat 42426420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 42310000 - 42310124
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctc 269  Q
    |||||||||| ||||||||||| || |||  |||||||||||||| |||||||||||||||||||| |||| | | |||||||  ||  |||||||||||    
T  42310000 tcaataagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagatcaaa-cttgatttctacccaatttctcaatctc 42310098  T
Q  270 atcaatgaacaagacactcaatgatt 295  Q
    | |||||| |||||||||||||||||    
T  42310099 accaatgagcaagacactcaatgatt 42310124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 38747125 - 38746990
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| |  | ||||| ||||||| |||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  38747125 atctctccaatcctctatcaatgagtttttccaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 38747027  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| ||||||||| ||||||||||| |||||    
T  38747026 cccattttcccaatctcattaatgaacaagatactca 38746990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 533889 - 533748
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||| |||||| || | ||||| |||| ||||||||||| || ||   ||||||| |||||| ||||||||||||||||||| || ||||||||||||||    
T  533889 atctttccaatccactatcaatgagttcttacaaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaaag-accaaccctaatttcta 533791  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||| ||||||||    
T  533790 cccattttcccaatctcaccaatgaacaagacacgcaatgatt 533748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 8566042 - 8566135
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||| |||||  ||| ||||||||||||  |||||||||||||||||||||||    
T  8566042 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaagttctacccattttctcaatctcacaaatgaacaagacactcaatgatt 8566135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 13695766 - 13695880
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaaca 280  Q
    |||||||||||| || |||  |||||||||||||| ||| |||||||||||||||||||||||||||||| || | | ||| |||||||  ||| ||| |    
T  13695766 tttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgtacccttttcccaatctctccaaagaaaa 13695865  T
Q  281 agacactcaatgatt 295  Q
    ||| |||||||||||    
T  13695866 agatactcaatgatt 13695880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 30182706 - 30182567
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| |  |||  |||||||||||||| |||  ||||| ||||||||||||| |||||||||||| |    
T  30182706 ctctccaatccactatcaatgagttcttccaaagagatagaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacc 30182608  T
Q  256 atgtt-ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    || || | |||||||| ||||||||||||||||||||||||    
T  30182607 atttttcccaatctcaccaatgaacaagacactcaatgatt 30182567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 538145 - 538004
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||  | | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||| | |||| |||||||||    
T  538145 atctctccaatctactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagagc-aaccttaatttcta 538047  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||| ||||||||    
T  538046 cccattttcccaatctcactaatgaacaagacacgcaatgatt 538004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 3075754 - 3075847
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||||  |||| ||||||||||||||||||| ||||||||||| | || ||||||||||||  ||||||| |||||||||||||||    
T  3075754 gttacaagaaattagattcagcaagctcacaaagaacaaa-cctaatttctacctattttctcaatctcacaaatgaacgagacactcaatgatt 3075847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 5887516 - 5887605
Alignment:
Q  206 caagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat-catgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||| ||| |||||||||||||||||||||  ||||||||||| ||| ||||||||||||  ||||||||||||| |||||||||    
T  5887516 caagaaattagcttaaacaagctcacaaagaacaaa-tctaatttctatccattttctcaatctcacaaatgaacaagacattcaatgatt 5887605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 176 - 293
Target Start/End: Original strand, 16641007 - 16641127
Alignment:
Q  176 aagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatca---tgttctcaatctcatc 272  Q
    ||||| ||||||||||| || |||  ||||  |||||| | |||||||||||||||||||||||||| |||||||||| ||   | |||||||||||  |    
T  16641007 aagttcttacaaagagatacaaaagagttatcagaaatcagcttcaacaagctcacaaagaacaaacactaatttctaccatttttttctcaatctcgcc 16641106  T
Q  273 aatgaacaagacactcaatga 293  Q
    ||||||||||||||| |||||    
T  16641107 aatgaacaagacacttaatga 16641127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 28750703 - 28750844
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || ||   |||||| ||||||| |||||||||  ||| ||||||||| ||||||||||||    
T  28750703 atctctccaatccactatcaatgagttcttacaaaaagatacaaatgggttacaggaaattaacttcaacaatttcataaagaacaa-ccctaatttcta 28750801  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| ||||||||||||||||||||||||    
T  28750802 cccattttcccaatctcaccaatgaacaagacactcaatgatt 28750844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 33831800 - 33831659
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  33831800 atctcttcaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 33831702  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  ||||||||  |||||| ||||||||||||||||    
T  33831701 cccatttttccaatctcacaaatgaataagacactcaatgatt 33831659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 27637709 - 27637796
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactca 289  Q
    ||||||||||||||  || |||||||||| ||||||||| |||||||||||| | || |||||||||||| ||||||||||||||||||    
T  27637709 gttacaagaaattagtttaaacaagctcataaagaacaa-ccctaatttctacccattttctcaatctcaccaatgaacaagacactca 27637796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 295
Target Start/End: Complemental strand, 19806449 - 19806362
Alignment:
Q  207 aagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||| ||||||||| ||||||||||||||  ||||||||||| | || ||  |||||||| ||||||||||||||||||||||||    
T  19806449 aagaaattagcttcaacaaactcacaaagaacaa--cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgatt 19806362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 31183091 - 31182952
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || |||  |||||||||||||| ||| ||||| |||||||||||| || |||||||||||    
T  31183091 atctctccaatccagtatcaatgagttcttacaaagggatac-aaatggttacaagaaattaacttaaacaaactcacaaagaac-aatcctaatttcta 31182994  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||||||||||||    
T  31182993 cccattttc-caatctcacaaatgaacaagacactcaatgatt 31182952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 32636944 - 32636803
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| |||  ||||| ||||||||||| |||| |||||||||    
T  32636944 atctctccaatccactatcaaagagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccataatttcta 32636846  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||| ||||||||||||||||    
T  32636845 cccattttcccaatctcaccaatgaataagacactcaatgatt 32636803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 5058165 - 5058032
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   | ||||||||| || ||||||||||||||||  |||||| ||||||||||||    
T  5058165 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggatacaagaaaatagcttcaacaagctcaca--gaacaa-ccctaatttcta 5058069  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactca 289  Q
     | || ||| |||||||| ||||||||||||||||||    
T  5058068 cccattttcccaatctcaccaatgaacaagacactca 5058032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 295
Target Start/End: Complemental strand, 13343132 - 13343039
Alignment:
Q  203 ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc--atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |   | ||| |||||||| ||||||||||||||||||||||||    
T  13343132 ttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacccttttttcccaatctcaccaatgaacaagacactcaatgatt 13343039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 37439261 - 37439163
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  37439261 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattaactttgacaagttcacaaagaac-aaccctaatttcta 37439163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 30683020 - 30683110
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgtt-ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||||||||| |||||||||||    ||||||||||| | | || | ||||||||  |||||||||||||||||||||||    
T  30683020 gttacaagaaattagcttcaacaagttcacaaagaac----cctaatttctaccctttttcccaatctcacaaatgaacaagacactcaatgatt 30683110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 268
Target Start/End: Complemental strand, 316855 - 316769
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatct 268  Q
    |||||||||||| || |||   ||||||||||||| ||||||||||||| | ||||||||| ||||||||||| | | ||||||||||    
T  316855 tttacaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaa-cctaatttctacctttttctcaatct 316769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 36074093 - 36074234
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| || |||||||||| |||||||||||| |    
T  36074093 ctctccaatccactatcaatgagttctt-caaagagatacaaaagagttacaagaaattagctttgacaagttcgcaaagaacaa-ccctaatttctacc 36074190  T
Q  256 atgttct----caatctcatcaatgaacaagacactcaatgatt 295  Q
     | || |    |||||||| ||||||||||||||||||||||||    
T  36074191 cttttttttcccaatctcaccaatgaacaagacactcaatgatt 36074234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 16137137 - 16137074
Alignment:
Q  153 aatctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaatta 215  Q
    |||||||| |||||| | ||||| |||| ||| |||||||||||||||| ||||||||||||||    
T  16137137 aatctctcaaattcactatcaatgagttgttttcaaagagaaaccaaaaggttacaagaaatta 16137074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 154 - 207
Target Start/End: Complemental strand, 16135544 - 16135490
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttaca 207  Q
    |||||||||||||||| | ||| |||| |||||||||||||||||||| ||||||    
T  16135544 atctctccaattcattatgaatgagttatttacaaagagaaaccaaaaggttaca 16135490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 22536380 - 22536453
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  22536380 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 22536453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Original strand, 29751250 - 29751324
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| ||||||||||||||  ||  ||||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  29751250 caaaaggttacaagaaattagatttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctca 29751324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 10700696 - 10700794
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    ||||||||| |||| | ||||| |||| |||  ||||||| || ||||||||| ||||| ||| ||||||||||||| | ||||||||| ||||||||||    
T  10700696 atctctccacttcactatcaatgagttctttttaaagagatacaaaaatgttataagaa-ttagcttcaacaagctctctaagaacaaa-cctaatttct 10700793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 30802899 - 30802859
Alignment:
Q  203 ttacaagaaattatcttcaacaagctcacaaagaacaaacc 243  Q
    |||||| ||||||  ||||||||||||||||||||||||||    
T  30802899 ttacaataaattagtttcaacaagctcacaaagaacaaacc 30802859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 32609639 - 32609567
Alignment:
Q  171 tcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaac 242  Q
    |||||||||| |||||||||| | || |||  |||||||||||||| ||||||||| ||| ||||||| ||||    
T  32609639 tcaataagttctttacaaagaaatacaaaagagttacaagaaattaacttcaacaaactctcaaagaataaac 32609567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 35616262 - 35616148
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcat-caatgaa 278  Q
    |||||||||| | || |||  |||||||||||||| ||| ||| ||||| | ||||||||| ||||||||||| |||| ||||||||||| | |  ||||    
T  35616262 tttacaaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaa-cctaatttctactcat-ttctcaatctcttcccgtgaa 35616165  T
Q  279 caagacactcaatgatt 295  Q
    ||||| |||||||||||    
T  35616164 caagagactcaatgatt 35616148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 13121870 - 13121748
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| ||||| |||||||||| ||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| || |||||    
T  13121870 tcaatgagtttctacaaagagatac--aaaggttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctaccattttcccagtctca 13121773  T
Q  271 tcaatgaacaagacactcaatgatt 295  Q
     ||||||||||||||||||||||||    
T  13121772 ccaatgaacaagacactcaatgatt 13121748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 5723304 - 5723444
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||| |||||||||||||| |||  ||||| ||||||||||| || |||||||||||    
T  5723304 atctctccaatccactatcaatgagttcttacaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaac-aagcctaatttcta 5723402  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | | |||||||||||| ||||||||||||||||||||||||    
T  5723403 cccttttctcaatctcaccaatgaacaagacactcaatgatt 5723444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 295
Target Start/End: Original strand, 7815320 - 7815462
Alignment:
Q  153 aatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    |||||||||||| || | | ||| |||| ||||||||||| || |||  |||||||||||||| ||||||||||||   ||||||||||||||||||||     
T  7815320 aatctctccaatccactataaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaagcttctaaagaacaaaccctaatttca 7815419  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | | | |||||||||||| ||||||||||||||| ||||||||    
T  7815420 acctttttctcaatctcaccaatgaacaagacacgcaatgatt 7815462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 24398178 - 24398034
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    ||||||||||| |||| ||||| |||| |||||||||||| || |||  |||||||||||||| ||||||||||||||||||||||||||| ||| ||||    
T  24398178 atctctccaatccattatcaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccttaacttct 24398079  T
Q  253 atc--atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | |   | ||| |||||||| |||||||||||||||||| |||||    
T  24398078 accctttcttcacaatctcaccaatgaacaagacactcattgatt 24398034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 2334466 - 2334607
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  ||||| |||||||| |||||||||| ||||||||||| |||||| |||||||    
T  2334466 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttactagaaattagcttcaacaagttcacaaagaac-aacccttatttcta 2334564  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  2334565 cccattttcccaatctcaccaatgaacaagacactcaatgatt 2334607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 45727049 - 45726914
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || || | |||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  45727049 atctctccaatccactatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttcta 45726951  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||| ||||||||||    
T  45726950 cccattttcccaatctcaccaatgaataagacactca 45726914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 34139867 - 34139960
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||||||  ||| ||||||||||||  |||||||||||||||||||||||    
T  34139867 gttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccattttctcaatctcacaaatgaacaagacactcaatgatt 34139960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 36318057 - 36318198
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||| ||||||  ||||||||||||||||||||| ||||||||||||||    
T  36318057 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaataaattagtttcaacaagctcacaaagaac-aaccctaatttcta 36318155  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  |||||||| ||||||||||||||||||||||||    
T  36318156 cccatttttccaatctcaccaatgaacaagacactcaatgatt 36318198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 36773682 - 36773541
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaattt-ct 252  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| |||||||||||  |    
T  36773682 atctctccaatccactatcaaagagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttatt 36773584  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  36773583 cccattttcccaatctcaccaatgaacaagacactcaatgatt 36773541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 38312360 - 38312219
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| || | ||||||||||| || ||   ||||||||||||||  ||||||||| ||||||||||| ||||||||||||||    
T  38312360 atctctccaatccactatcaatgagatcttacaaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaagaac-aaccctaatttcta 38312262  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  38312261 cccattttcccaatctcaccaatgaacaagacactcaatgatt 38312219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 42362472 - 42362331
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  42362472 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 42362374  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||||||||||||    
T  42362373 cccattttcccaatctcacaaatgaacaagacactcaatgatt 42362331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 6595054 - 6595196
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| |||||||||||  | |||  |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  6595054 atctctccaatccactatcaacgagttcttacaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 6595152  T
Q  254 tcatgttctc--aatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| || ||  ||||||| ||||||||||||||| ||||||||    
T  6595153 ccattttttcctaatctcaccaatgaacaagacacccaatgatt 6595196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 181 - 291
Target Start/End: Complemental strand, 33648264 - 33648153
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatc-aatgaac 279  Q
    |||||||||| | || |||  |||||| ||||||| |||||||||||||||||||||||||||||||||| || ||| ||||||||||| ||  ||| ||    
T  33648264 tttacaaagaaatacaaaagggttacaggaaattagcttcaacaagctcacaaagaacaaaccctaatttttaccattttctcaatctcctctcatgtac 33648165  T
Q  280 aagacactcaat 291  Q
    ||||||||||||    
T  33648164 aagacactcaat 33648153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 723792 - 723933
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  723792 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 723890  T
Q  254 tcatgttct-caatctcatcaatgaacaagacactcaatgatt 295  Q
     |  ||| | ||||||||  |||||||||||||||||||||||    
T  723891 cccagttttccaatctcacaaatgaacaagacactcaatgatt 723933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 11690573 - 11690480
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||||  ||| ||| ||||||||  |||||||||||||||||||||||    
T  11690573 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctacccattttcccaatctcacaaatgaacaagacactcaatgatt 11690480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 17057417 - 17057558
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||| |||||| ||||||||||||  |||||||| ||||||||||||||    
T  17057417 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaac-aaccctaatttcta 17057515  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  |||||||| ||||||||||||||||||||||||    
T  17057516 cccatttttccaatctcaccaatgaacaagacactcaatgatt 17057558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 17085400 - 17085541
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||| |||||| ||||||||||||  |||||||| ||||||||||||||    
T  17085400 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaac-aaccctaatttcta 17085498  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  |||||||| ||||||||||||||||||||||||    
T  17085499 cccatttttccaatctcaccaatgaacaagacactcaatgatt 17085541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 29867989 - 29867848
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| |||  ||||| ||||||||||||| ||||||||||||    
T  29867989 atctctccaatccactatcaaagagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 29867891  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| ||||||||||||||||||||||||    
T  29867890 cccattttcccaatctcaccaatgaacaagacactcaatgatt 29867848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 35446932 - 35447067
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||||||||||  ||||||||| ||||||||||| ||||||||||||||    
T  35446932 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagattcaacaagatcacaaagaac-aaccctaatttcta 35447030  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactca 289  Q
     | || ||  |||||||| ||||||||||||||||||    
T  35447031 ccaattttaccaatctcaccaatgaacaagacactca 35447067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 36205715 - 36205853
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| |  ||||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| |||||||||||| |    
T  36205715 ctctccaatccgctgtcaatgagttctt-caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacc 36205812  T
Q  256 atgtt-ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    || || | |||||||| ||||||||||||||||||||||||    
T  36205813 atttttcccaatctcaccaatgaacaagacactcaatgatt 36205853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 26353304 - 26353205
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||  ||||||| ||| || ||| ||||||||||||||| ||||||||| ||||||||||||||||| |||||||||    
T  26353304 atctctccaatccactatcaatgagtacttacaaaaagatacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttcta 26353205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 11049657 - 11049529
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatg-ttacaagaaattatcttcaacaagctcacaaa---gaacaaaccctaatttctatcatgttctcaat 266  Q
    ||||| |||| ||||||||||| || |||| | ||| ||||||||| ||||||||||||||||||   |||||||||||||||| || ||| |||  |||    
T  11049657 tcaatgagttcttacaaagagatactaaaagggttataagaaattagcttcaacaagctcacaaattagaacaaaccctaatttataccattttcctaat 11049558  T
Q  267 ctcatcaatgaacaagacactcaatgatt 295  Q
    |||| |||  |||||||||||||||||||    
T  11049557 ctcaccaaaaaacaagacactcaatgatt 11049529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 24885733 - 24885640
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| ||||||||||||||||||||| ||||||||||| |||| ||| |||| | |  |||||||||||||||||||||||    
T  24885733 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttctactcattttcccaattttacaaatgaacaagacactcaatgatt 24885640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 33162546 - 33162639
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||| |||  ||| ||| ||||||||||||||||| ||||||    
T  33162546 gttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcctaatttcaccaatgaacaagacactcgatgatt 33162639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 36988124 - 36988265
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  ||||||||||||||  ||  ||||||||||| ||||| ||||||||||||||    
T  36988124 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattagttttgacaagctcacatagaac-aaccctaatttcta 36988222  T
Q  254 tcatgttct-caatctcatcaatgaacaagacactcaatgatt 295  Q
     | | || | ||||| || ||||||||||||||||||||||||    
T  36988223 cccttttttccaatcccaccaatgaacaagacactcaatgatt 36988265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 1631783 - 1631915
Alignment:
Q  157 tctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tc 255  Q
    |||||||| || | ||||| |||| ||||||||||| || ||   ||||||||| |||| |||||||||||||||||||||| || |||||||||||  |    
T  1631783 tctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagatattagcttcaacaagctcacaaagaac-aatcctaatttctaccc 1631881  T
Q  256 atgttctcaatctcatcaatgaacaagacactca 289  Q
    || ||  |||||||| ||||||||||||||||||    
T  1631882 atttttccaatctcaccaatgaacaagacactca 1631915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 17490196 - 17490331
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| || | ||||| |||| ||||||||||  || |||  |||||||||||||| ||||||||||||||||||||| ||     ||||||||    
T  17490196 atctctacaatccactatcaatgagttcttacaaagagttacaaaagagttacaagaaattagcttcaacaagctcacaaagaataa-----aatttcta 17490290  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| ||| |||||||| |||||||||||||| |||||||||    
T  17490291 ccattttc-caatctcaacaatgaacaagacattcaatgatt 17490331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 288
Target Start/End: Original strand, 42288158 - 42288292
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| |||| ||||| || | ||||||||| | || ||   ||||||| |||||| |||||||||||||||||||||| |||| |||||||||    
T  42288158 atctctccaatccattatcaatgagctcttacaaagaaatacaaatgggttacaataaattagcttcaacaagctcacaaagaac-aaccttaatttcta 42288256  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactc 288  Q
      ||| ||| |||||||| ||||| |||||||||||    
T  42288257 cccattttcccaatctcaccaatgcacaagacactc 42288292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 4503183 - 4503322
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| |||||||||||| |    
T  4503183 ctctccaatccactatcaatgagttctt-caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacc 4503280  T
Q  256 atgttctc--aatctcatcaatgaacaagacactcaatgatt 295  Q
    || || ||  ||||||  ||||||||||||||||||||||||    
T  4503281 attttttcccaatctctccaatgaacaagacactcaatgatt 4503322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 11151687 - 11151780
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| |||||||||||||||||||||  ||||||||||  ||| ||| |||| ||| |||||||||||| |||||||||||    
T  11151687 gttacaagaaattagcttaaacaagctcacaaagaacaaa-tctaatttctacccattttcccaatttcaccaatgaacaagagactcaatgatt 11151780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 14633922 - 14634015
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| |||||||||||||||||| || |||||||||||  ||| ||  ||||||||  |||||||||||||||||||||||    
T  14633922 gttacaagaaattagcttaaacaagctcacaaagaac-aatcctaatttctacccattttaccaatctcacaaatgaacaagacactcaatgatt 14634015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 45099872 - 45099733
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |    
T  45099872 ctctccaatccactatcaatgagttctt-caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 45099775  T
Q  256 --atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
       | ||| |||||||| ||||||||||||||||||||||||    
T  45099774 cttttttcccaatctcaccaatgaacaagacactcaatgatt 45099733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 30218120 - 30218234
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatct-catcaatgaac 279  Q
    |||||||||||| || |||  |||||||||||||| |||||| |||||| | ||||||||| ||||| ||||| |   |||||||||| | || ||||||    
T  30218120 tttacaaagagatacaaaatggttacaagaaattagcttcaataagctctccaagaacaaa-cctaacttctacccatttctcaatctccttccatgaac 30218218  T
Q  280 aagacactcaatgatt 295  Q
    ||||||||||||||||    
T  30218219 aagacactcaatgatt 30218234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 30833464 - 30833324
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaa-gagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat 254  Q
    ||||||||| || | ||||| |||| ||||||| |||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||     
T  30833464 ctctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaac-aaccctaatttctac 30833366  T
Q  255 catgttct--caatctcatcaatgaacaagacactcaatgatt 295  Q
    | | ||||  |||||||| ||| ||||||||||||||||||||    
T  30833365 ccttttctcccaatctcaccaa-gaacaagacactcaatgatt 30833324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 4484380 - 4484520
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaa-gagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat 254  Q
    ||||||||| || | ||||| |||| ||||||| |||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||     
T  4484380 ctctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctac 4484478  T
Q  255 catgttct--caatctcatcaatgaacaagacactcaatgatt 295  Q
    | | ||||  |||| ||| ||| ||||||||||||||||||||    
T  4484479 ccttttctcccaatttcaccaa-gaacaagacactcaatgatt 4484520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 254
Target Start/End: Complemental strand, 4561183 - 4561109
Alignment:
Q  179 tttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat 254  Q
    |||||||||||||| || ||||||||||||||||||| |||||||||  || || | |||||| ||||||||||||    
T  4561183 tttttacaaagagatacaaaaatgttacaagaaattagcttcaacaatatctcata-aacaaaacctaatttctat 4561109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 11067425 - 11067284
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| |||| | ||| |||| ||||||||||| || ||   |||||||||||||| |||  |||||||||||||| || ||| ||||||||||    
T  11067425 atctcttcaatccattataaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaagtac-aacactaatttcta 11067327  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  |||| ||| ||||||| ||||||||||||||||    
T  11067326 cccatttttccaatttcaccaatgaataagacactcaatgatt 11067284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 14202501 - 14202585
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacac 286  Q
    |||||||||||||| ||| ||||||||||||||||||||| | |||||||||  ||| ||| ||||||||  |||||| |||||||    
T  14202501 gttacaagaaattagcttaaacaagctcacaaagaacaaa-cataatttctacccattttcccaatctcagaaatgaaaaagacac 14202585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 42261561 - 42261648
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctc 269  Q
    |||||||||| | || |||  |||||||||||||| ||||||||||||| | ||||||||| | |||||||||  || |||||||||||    
T  42261561 tttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cttaatttctacgattttctcaatctc 42261648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 6266769 - 6266695
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| ||||||||||||||  ||  ||||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  6266769 caaaaggttacaagaaattagatttgacaagttcacaatgaacaaaccctaatttctacccttttcccaatctca 6266695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 6e-34; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 48142474 - 48142567
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  48142474 gttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttctatcatgttcccaatctcatcaatgggcaagacactcaatgatt 48142567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 54199954 - 54200095
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||| |||||| | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  54199954 atctctctaattcactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 54200052  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  54200053 cccattttcccaatctcaccaatgaacaagacactcaatgatt 54200095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 56178685 - 56178826
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  56178685 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 56178783  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | ||| |||||||| ||||||||||||||||||||||||    
T  56178784 ccctttttcccaatctcaccaatgaacaagacactcaatgatt 56178826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 153 - 289
Target Start/End: Complemental strand, 2209835 - 2209698
Alignment:
Q  153 aatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaattt 250  Q
    |||||||||||| || | ||||| |||| ||||||||||| || ||||||  ||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  2209835 aatctctccaatccactatcaatgagttcttacaaagagatac-aaaatgggttacaagaaattagcttcaacaagctcacaaagaa-aaaccctaattt 2209738  T
Q  251 cta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||  ||| ||| |||||||| ||||||||||||||||||    
T  2209737 ctacccattttcccaatctcaacaatgaacaagacactca 2209698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 27417013 - 27417148
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||||||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  27417013 atctctccaatccactatcaatgagtttttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 27417111  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||  |||||||| ||||||||||||||||||    
T  27417112 cacattttaccaatctcaccaatgaacaagacactca 27417148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 293
Target Start/End: Original strand, 36463437 - 36463576
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || ||||||  |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||| |||| | ||||||||||||    
T  36463437 atctctccaatccactgtcaaagagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-agccctaatttcta 36463535  T
Q  254 t-catgttctcaatctcatcaatgaacaagacactcaatga 293  Q
    | ||| ||| |||||||| ||||||||||||||||||||||    
T  36463536 tccattttcccaatctcaccaatgaacaagacactcaatga 36463576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 40632565 - 40632430
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || || | |||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  40632565 atctctccaatccactatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aactctaatttcta 40632467  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  40632466 cccattttcccaatctcaccaatgaacaagacactca 40632430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 5429799 - 5429658
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || ||   |||||||||||||| ||||||||||||||| |||||  ||||||||||||||    
T  5429799 atctctccaatccactatcaatgagttcttacaaatagatacaaatgggttacaagaaattagcttcaacaagctcacgaagaa-taaccctaatttcta 5429701  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     |||| ||| |||||||| ||||||||||||||||||||||||    
T  5429700 ctcattttcccaatctcaccaatgaacaagacactcaatgatt 5429658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 26175684 - 26175825
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct- 252  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||||||||||  ||||||||||||||||||||| |||||||||||||     
T  26175684 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaac-aaccctaatttctc 26175782  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  26175783 cccattttcccaatctcaccaatgaacaagacactcaatgatt 26175825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 31474271 - 31474129
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||  | | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||| |||| |||||||||  |||||||||||    
T  31474271 atctctccaatcaactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaagacctaatttcta 31474172  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| ||||||||||||||||||||||||    
T  31474171 cccattttctcaatctcaccaatgaacaagacactcaatgatt 31474129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 34570462 - 34570603
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |    |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  34570462 atctctccaatccactatcaatgagttcttacaaagagatacaattgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 34570560  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| ||||||||||||||||||||||||    
T  34570561 cctattttcccaatctcaccaatgaacaagacactcaatgatt 34570603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 36994644 - 36994503
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  36994644 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttcta 36994546  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  36994545 cccattttcccaatctcaccaatgaacaagacactcaatgatt 36994503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 46703621 - 46703485
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    ||||||||||| || | | ||| |||| ||||||||||| || ||||||  ||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  46703621 atctctccaatccactataaatgagttcttacaaagagatac-aaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttc 46703524  T
Q  252 ta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    || |||| ||| |||||||| ||||||||||||||||||    
T  46703523 tactcattttcccaatctcaccaatgaacaagacactca 46703485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 9927506 - 9927647
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  9927506 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 9927604  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||| |||||||||| |||||    
T  9927605 cccattttcccaatctcaccaatgaataagacactcagtgatt 9927647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 37229769 - 37229911
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg-ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    ||||||||||| || | | ||| |||| ||||||||||| |  |||| | |||||| |||||  ||| ||||||||||||||||||| ||||||||||||    
T  37229769 atctctccaatccactataaatgagttcttacaaagagatataaaaagggttacaacaaatttgctttaacaagctcacaaagaacacaccctaatttct 37229868  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | ||| ||| |||||||| |||||||||||||||||| |||||    
T  37229869 accattttcccaatctcaccaatgaacaagacactcattgatt 37229911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 155 - 295
Target Start/End: Complemental strand, 4588078 - 4587937
Alignment:
Q  155 tctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat 254  Q
    |||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||||| |||||||||||| | |||||||||     
T  4588078 tctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaatcttaatttctac 4587979  T
Q  255 c-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |  | ||| |||| ||| ||||||||| ||||||||||||||    
T  4587978 cttttttcccaatttcaccaatgaacatgacactcaatgatt 4587937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 203 - 295
Target Start/End: Original strand, 47038507 - 47038598
Alignment:
Q  203 ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||| ||| |||||||| ||||||||||||||||||||||||    
T  47038507 ttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttc-caatctcaccaatgaacaagacactcaatgatt 47038598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 48893686 - 48893831
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaa----gaacaaaccctaatt 249  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||    |||| ||||||||||    
T  48893686 atctctccaatccactatcaaagagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaacaatgaac-aaccctaatt 48893784  T
Q  250 tcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||  ||| |||||||||||| ||||||||||||||||||||||||    
T  48893785 tctacccattttctcaatctcaccaatgaacaagacactcaatgatt 48893831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 53345289 - 53345196
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||||  ||||||||||||||||||||  |||| ||||||||||||| |||||||||||  | || |||||||||||||||||||    
T  53345289 gttacaagaaattagtttcaacaagctcacaaagaatcaaccttaatttctatcattttctcaatctctccgataaacaagacactcaatgatt 53345196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 8665528 - 8665393
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  8665528 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaac-aaccctaatttcta 8665430  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| || ||||| ||||||||||||||||||    
T  8665429 cccattttcccattctcaccaatgaacaagacactca 8665393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 35662561 - 35662426
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||| |||| ||||||| ||||||||||||||    
T  35662561 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaaactcataaagaac-aaccctaatttcta 35662463  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| || ||||||||| ||||||||||||||||||    
T  35662462 cccattttttcaatctcaccaatgaacaagacactca 35662426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 48143163 - 48143021
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||  |||||| || |||  |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  48143163 atctctccaatccactatcaatgagttcttatgaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 48143065  T
Q  254 --tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      |  | ||| |||||||| ||||||||||||||||||||||||    
T  48143064 cctttttttcccaatctcaccaatgaacaagacactcaatgatt 48143021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 289
Target Start/End: Complemental strand, 54883136 - 54883005
Alignment:
Q  158 ctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tca 256  Q
    ||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||| ||| ||||||||||||||  ||    
T  54883136 ctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttctaccca 54883038  T
Q  257 tgttctcaatctcatcaatgaacaagacactca 289  Q
    | ||| |||||||| ||||||||||||||||||    
T  54883037 ttttcccaatctcaccaatgaacaagacactca 54883005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 154 - 248
Target Start/End: Original strand, 26699490 - 26699585
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaat 248  Q
    ||||||||||| |||| | ||| |||| |||||||||||| || |||  |||||||||||||| ||||||||||||||||||||||||||||||||    
T  26699490 atctctccaatccattataaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaaccctaat 26699585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 283
Target Start/End: Complemental strand, 379500 - 379371
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  379500 atctctccaatccactatcaattagttcttacaaagcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 379402  T
Q  254 -tcatgttctcaatctcatcaatgaacaaga 283  Q
      ||| ||||||||||||  |||||||||||    
T  379401 cccattttctcaatctcacaaatgaacaaga 379371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 12739646 - 12739739
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||  ||||| ||||||||||||| |||||||||||||| || ||| |||||||| ||||||||||||||||||||||||    
T  12739646 gttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgatt 12739739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 12747852 - 12747945
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||  ||||| ||||||||||||| |||||||||||||| || ||| |||||||| ||||||||||||||||||||||||    
T  12747852 gttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctatccattttcccaatctcaccaatgaacaagacactcaatgatt 12747945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 24969232 - 24969091
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  24969232 atctctccaatccactatcaattagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-tctaatttcta 24969134  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  |||||||| ||| ||||||||| ||||||||||    
T  24969133 cccatttttccaatctcaccaaagaacaagactctcaatgatt 24969091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 26364356 - 26364223
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | | ||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  26364356 atctctccaatccactattaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 26364258  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacact 287  Q
      ||| ||| |||||||| ||||||||||||||||    
T  26364257 cccattttcccaatctcaccaatgaacaagacact 26364223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 52467402 - 52467543
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | |||| ||||| |||||||| || || ||   ||||||||| |||| ||||||||||||||||||||||||| |||||||||||    
T  52467402 atctctccaatccactatcaaaaagttattacaaagtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaa-cctaatttcta 52467500  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||| ||||  |||||||||||||||||||||||    
T  52467501 cccattttcccaacctcacaaatgaacaagacactcaatgatt 52467543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 50673895 - 50674029
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||||   || |||||||||||    
T  50673895 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaaga--caatcctaatttcta 50673992  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
     |||| ||||||||||||  |||||||| ||||||||    
T  50673993 ctcattttctcaatctcacaaatgaacacgacactca 50674029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 291
Target Start/End: Original strand, 6542227 - 6542366
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || |||   | |||||||||||  |||||||||||||||||||||||| |||||||||||    
T  6542227 atctctccaatccactatcaacgagttcttacaaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcctaatttcta 6542326  T
Q  254 tca--tgttctcaatctcatcaatgaacaagacactcaat 291  Q
     ||  | ||| |||||||  ||||||||||||||||||||    
T  6542327 ccattttttcccaatctccccaatgaacaagacactcaat 6542366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 8648259 - 8648124
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||| ||||||||| ||||||||| ||||||| |||| ||||||||||||||    
T  8648259 atctctccaatccaatatcaatgagttcttacaaagagatacaaatgggttataagaaattagcttcaacaaactcacaatgaac-aaccctaatttcta 8648161  T
Q  254 t-catgttctcaatctcatcaatgaacaagacactca 289  Q
    | ||| ||| || ||||| ||||||||||||||||||    
T  8648160 tccattttcccattctcaccaatgaacaagacactca 8648124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 12073512 - 12073377
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||| |||||| ||||||||||||||||||||||||| |||||||||||    
T  12073512 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 12073414  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| |||| | |||||||||||    
T  12073413 cccattttcccaatctcaccaataagcaagacactca 12073377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 12119632 - 12119517
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaac 279  Q
    |||||||||||| || |||  |||||||||||||| |||||| ||| |||||||||||||||| ||||||||| || | ||  |||||||| | ||||||    
T  12119632 tttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaaccataatttctactcttttttccaatctcacctatgaac 12119533  T
Q  280 aagacactcaatgatt 295  Q
    |||||||||| |||||    
T  12119532 aagacactcattgatt 12119517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 3913568 - 3913427
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||| | || ||   |||| ||||||||| ||||||||| |||||||||||||  | ||||||||||    
T  3913568 atctctccaatccactatcaatgagttcttacaaagatatacaaatgggttaaaagaaattagcttcaacaaactcacaaagaacag-ctctaatttcta 3913470  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     |||| ||| ||||||||  |||||||||||||||||||||||    
T  3913469 ctcattttcccaatctcacaaatgaacaagacactcaatgatt 3913427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 5871892 - 5871799
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||  ||| ||||||||||||||||||||| |||||||||||  ||| ||  |||||||| ||||||||||||||||||||||||    
T  5871892 gttacaagaaatttgcttaaacaagctcacaaagaacaaa-cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgatt 5871799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 21688369 - 21688233
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||||||| ||||| |||| || | |||||| || ||   ||||||| ||||||  ||||||||||||||||||||| ||||||||||||||    
T  21688369 atctctccaattcattatcaatgagttcttccgaagagatacaaatgagttacaaaaaattagtttcaacaagctcacaaagaac-aaccctaatttcta 21688271  T
Q  254 tc--atgttctcaatctcatcaatgaacaagacactca 289  Q
     |   | |||||||||||| | ||||||||||||||||    
T  21688270 cccatttttctcaatctcaccgatgaacaagacactca 21688233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 37740745 - 37740604
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||| ||    
T  37740745 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttata 37740647  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | |||  ||||||| |||||||||||||||||| |||||    
T  37740646 ccctttttccaaatctcaccaatgaacaagacactcagtgatt 37740604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 52095458 - 52095551
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||  ||||| ||||||||||||| |||||||||||| | || ||| |||||||| ||||||||||||||||||||||||    
T  52095458 gttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacccattttcccaatctcaccaatgaacaagacactcaatgatt 52095551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 295
Target Start/End: Original strand, 55085462 - 55085553
Alignment:
Q  203 ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||||||||| | || ||| |||||||| |||||||||||||| |||||||||    
T  55085462 ttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttctacctattttc-caatctcaccaatgaacaagacagtcaatgatt 55085553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 6656076 - 6655941
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| |||| |||||||||    
T  6656076 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaac-aaccttaatttcta 6655978  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| || |||||||||  | |||||||||||||||    
T  6655977 cccattttttcaatctcacaagtgaacaagacactca 6655941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 12745484 - 12745625
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||||||||||  ||  ||||| ||||||||||| ||||||||||||||    
T  12745484 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagttttgacaagttcacaaagaac-aaccctaatttcta 12745582  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||  ||||||  ||||||||||||||||||||||||    
T  12745583 cccattttcctaatctcgccaatgaacaagacactcaatgatt 12745625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 29254614 - 29254473
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   ||| |||||||||| |||||||||||||| ||| ||||| | ||||||||||    
T  29254614 atctctccaatccactatcaacgagttcttacaaagagacacaaatgggttgcaagaaattaacttcaacaagctcataaaaaacaa-ctctaatttcta 29254516  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | |  ||| |||||||| ||||||||||||||||||||||||    
T  29254515 cccaatttcccaatctcaccaatgaacaagacactcaatgatt 29254473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 29999854 - 29999995
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaaga-gaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    ||||||||||| || | ||||| |||| ||||||| | || || |||  |||||||||||||| |||  ||| | ||||||||||||| |||||||||||    
T  29999854 atctctccaatccactatcaatgagttcttacaaaaaagatacaaaagagttacaagaaattagctttgacatgttcacaaagaacaa-ccctaatttct 29999952  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | | | ||| |||||||| ||||||||||||||||||| ||||    
T  29999953 acccttttcccaatctcaccaatgaacaagacactcaacgatt 29999995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 269
Target Start/End: Original strand, 21703886 - 21703999
Alignment:
Q  157 tctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    |||||||| || ||||||| |||| |||||||| ||| || |||| | |||||||||| ||||||||||||||  | ||||||||| ||||||||||| |    
T  21703886 tctccaatccactgtcaatgagttctttacaaaaagatacaaaaagggtacaagaaatcatcttcaacaagctttctaagaacaaaacctaatttctacc 21703985  T
Q  256 atgttctcaatctc 269  Q
     | |||||||||||    
T  21703986 tttttctcaatctc 21703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 290
Target Start/End: Original strand, 45687230 - 45687367
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc-t 252  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || ||   |||| ||||||||| |||  |||||||||||||||||||| ||||||||| |    
T  45687230 atctctccaatccactatcaatgagttcttacaaatagatacaaatgagttataagaaattagctttgacaagctcacaaagaacaaaacctaatttctt 45687329  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaa 290  Q
      ||| ||| |||||||| |||||||||||||| ||||    
T  45687330 cccattttcccaatctcaccaatgaacaagacaatcaa 45687367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 41964536 - 41964400
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||||||  |||||| |||||| ||| |||||||||||||||||| ||||||||||||    
T  41964536 atctctccaatccactatcaatgagttcttacaaagggatac-aaaatgggttacaataaattagcttaaacaagctcacaaagaac-aaccctaatttc 41964439  T
Q  252 ta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    ||  ||| ||| |||| ||| ||| ||||||||||||||    
T  41964438 tacccattttcccaatttcaccaacgaacaagacactca 41964400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 177 - 290
Target Start/End: Original strand, 46147462 - 46147575
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaat 275  Q
    |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||| |||| ||||||||||||||  ||| ||  |||||||| | ||    
T  46147462 agttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttctacccatttttccaatctcaccgat 46147560  T
Q  276 gaacaagacactcaa 290  Q
    |||||||||| ||||    
T  46147561 gaacaagacaatcaa 46147575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 5207946 - 5208031
Alignment:
Q  210 aaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||| |||||||||| |||||||||||||||||||||||||| | | ||  ||||| |  ||||||||||| |||| |||||||    
T  5207946 aaattagcttcaacaagttcacaaagaacaaaccctaatttctaccctttttccaatcactccaatgaacaagtcactaaatgatt 5208031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 171 - 240
Target Start/End: Original strand, 50262766 - 50262835
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaa 240  Q
    ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||||||||    
T  50262766 tcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 50262835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 51337184 - 51337043
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccc-taatttct 252  Q
    ||||||| ||| || | ||||| |||| ||| ||||||| || |||  |||| || |||||||||| ||  ||||||||||||||||| || ||||||||    
T  51337184 atctctctaatacactatcaatgagttcttaaaaagagatacaaaagggttataataaattatcttaaa--agctcacaaagaacaaatccgtaatttct 51337087  T
Q  253 atcatgtt-ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | | | || |||||||||| ||||||||| ||||||||||||||    
T  51337086 accctttttctcaatctcaccaatgaacaggacactcaatgatt 51337043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 295
Target Start/End: Original strand, 5370148 - 5370276
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttca-acaagctcacaaagaacaaaccctaatttcta--tcatgttct--caa 265  Q
    ||||| |||| ||||||||||| || |||  |||||||||||||| |||   ||||| ||||||||||||| ||||||||||||  || | || |  |||    
T  5370148 tcaatgagttcttacaaagagatacaaaagggttacaagaaattagcttttgacaagttcacaaagaacaa-ccctaatttctacctcttttttttccaa 5370246  T
Q  266 tctcatcaatgaacaagacactcaatgatt 295  Q
    ||||| ||||||||||||||||||||||||    
T  5370247 tctcaccaatgaacaagacactcaatgatt 5370276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 12743973 - 12744071
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  12743973 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 12744071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 12744095 - 12744193
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  12744095 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 12744193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 12745362 - 12745460
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  12745362 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 12745460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 32091571 - 32091457
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatc-tcatcaatgaac 279  Q
    |||||||||||| || |||  ||||||||||||||  |||||||| ||| | ||||||||| ||||||||||| ||| ||| ||||| ||  | ||||||    
T  32091571 tttacaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaa-cctaatttctagcattttcccaatcttctcccatgaac 32091473  T
Q  280 aagacactcaatgatt 295  Q
    |||| |||||||||||    
T  32091472 aagagactcaatgatt 32091457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 288
Target Start/End: Complemental strand, 41639546 - 41639412
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | || || |||| ||||||| ||| || ||   |||||||||||||| |||||| ||| ||||||||||| ||||||||||||||    
T  41639546 atctctccaatccactatcgatgagttcttacaaatagatacaaatgggttacaagaaattagcttcaaaaagttcacaaagaac-aaccctaatttcta 41639448  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactc 288  Q
      ||| ||| |||||| | |||| ||||||||||||    
T  41639447 cccattttcccaatcttaccaataaacaagacactc 41639412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 29056411 - 29056337
Alignment:
Q  221 aacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||| |||||||||||||| |||||| ||| ||| ||| |||||||   ||||||||| |||||||||||||    
T  29056411 aacaagcacacaaagaacaaactctaattcctaccattttcccaatctctctaatgaacaaaacactcaatgatt 29056337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 52082753 - 52082846
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||||  ||  ||||| ||||||||||||| ||||| |||||| | || ||| |||||||| |||||||||||||| |||||||||    
T  52082753 gttacaagaaattagttttgacaagttcacaaagaacaa-ccctagtttctacccattttcccaatctcaccaatgaacaagacagtcaatgatt 52082846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 44570441 - 44570502
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaac 242  Q
    |||||||||||| || |||||||||||||||||||  |||||||||||| | || |||||||    
T  44570441 tttacaaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaac 44570502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 13009549 - 13009620
Alignment:
Q  224 aagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||| ||||||||||| ||||||||| | || ||| ||||||||  |||||||||||||||||||||||    
T  13009549 aagctcacgaagaacaaacc-taatttctacccattttcacaatctcacaaatgaacaagacactcaatgatt 13009620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 22882826 - 22882940
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctc-atcaatgaac 279  Q
    ||||| |||||| || |||  |||||||||||||| ||||||||| ||| | ||||||||| |||||||| ||||   || ||||||||  || ||||||    
T  22882826 tttacgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaacaaa-cctaatttttatccatttttcaatctctttccatgaac 22882924  T
Q  280 aagacactcaatgatt 295  Q
    ||| ||||||||||||    
T  22882925 aaggcactcaatgatt 22882940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 22934490 - 22934604
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctc-atcaatgaac 279  Q
    ||||| |||||| || |||  |||||||||||||| ||||||||| ||| | ||||||||| |||||||| ||||   || ||||||||  || ||||||    
T  22934490 tttacgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaacaaa-cctaatttttatccatttttcaatctctttccatgaac 22934588  T
Q  280 aagacactcaatgatt 295  Q
    ||| ||||||||||||    
T  22934589 aaggcactcaatgatt 22934604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 41639335 - 41639249
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactc 288  Q
    |||||||||||||| |||||| ||| | ||||||||| ||||||||||||||  ||| ||| |||||| | |||| ||||||||||||    
T  41639335 gttacaagaaattagcttcaaaaagtttacaaagaac-aaccctaatttctacccattttcccaatcttaccaataaacaagacactc 41639249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 269
Target Start/End: Original strand, 44967903 - 44967992
Alignment:
Q  179 tttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctc 269  Q
    |||||||||||||| || |||  |||||||||||||  ||||| ||||||| | |||| |||| ||||||||||| ||| ||| |||||||    
T  44967903 tttttacaaagagatac-aaatggttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctc 44967992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 295
Target Start/End: Complemental strand, 33089971 - 33089857
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat-catgttctcaatctcatca-atgaa 278  Q
    |||||| ||||| || |||  |||| || |||||| ||||||||||||| | ||||||||||  |||||||||| ||| | ||||||||| ||  |||||    
T  33089971 tttacagagagatacaaaatggttataataaattagcttcaacaagctctccaagaacaaaca-taatttctattcatct-ctcaatctcttcccatgaa 33089874  T
Q  279 caagacactcaatgatt 295  Q
    |||||||||||||||||    
T  33089873 caagacactcaatgatt 33089857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 181 - 229
Target Start/End: Original strand, 34788850 - 34788898
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctc 229  Q
    |||||||||||| || |||  |||||||||||||| |||||||||||||    
T  34788850 tttacaaagagatacaaaagagttacaagaaattaacttcaacaagctc 34788898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 30236245 - 30236110
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || || | |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  30236245 atctctccaatccactatcaatgagttcttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 30236147  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||||||||||||||||||||||    
T  30236146 cccattttcccaatctcatcaatgaacaagacactca 30236110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 40735503 - 40735362
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||| |||||| |||||||||||||||||||||| ||||||||||||||    
T  40735503 atctctccaatccactatcaatgagttcttacaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaac-aaccctaatttcta 40735405  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| ||||||||||||||||||||||||    
T  40735404 cccattttctcaatctcaccaatgaacaagacactcaatgatt 40735362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 5433951 - 5434067
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttct--caatctcatcaatgaa 278  Q
    |||||||||||| |  |||  |||||||||||||| ||| ||||||||||||||||||||||||||||||||| ||| ||||  |||||||| |||||||    
T  5433951 tttacaaagagatataaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctaccattttctcccaatctcaccaatgaa 5434050  T
Q  279 caagacactcaatgatt 295  Q
    |||||||||||||||||    
T  5434051 caagacactcaatgatt 5434067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 45095283 - 45095143
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| ||||||||||||    
T  45095283 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 45095185  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| ||| |||||||| ||||||||||||||||||||||||    
T  45095184 ccattttcccaatctcaccaatgaacaagacactcaatgatt 45095143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 46860594 - 46860459
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  46860594 atctctccaatccactatcaatgagttattacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 46860496  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| |||||||||||| ||||||||||||||||||    
T  46860495 cccattttctcaatctcaccaatgaacaagacactca 46860459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 5236504 - 5236645
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||| ||| |||| ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  5236504 atctctcgaatccattatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 5236602  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  5236603 cccattttcccaatctcaccaatgaacaagacactcaatgatt 5236645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 7762385 - 7762244
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  7762385 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 7762287  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | |||||||||||| ||||||| ||||||||||||||||    
T  7762286 ccctttttctcaatctcaccaatgaataagacactcaatgatt 7762244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 29196434 - 29196576
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||| |||||||||| |||  ||||||||||||||||||||||||||||||||    
T  29196434 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccctaatttcta 29196533  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  29196534 cccattttcccaatctcaccaatgaacaagacactcaatgatt 29196576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 40734618 - 40734477
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||  |||||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  40734618 atctctccaatccactatcaatgagttcttacaaagggatacaaatgtgttacaagaaattaggttcaacaagctcacaaagaac-aaccctaatttcta 40734520  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  40734519 cccattttcccaatctcaccaatgaacaagacactcaatgatt 40734477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 44700526 - 44700667
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || || | |||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  44700526 atctctccaatccactatcaaagagttcttacaaagagatacaaataggttacaagaaattagcttcaacaaactcacaaagaac-aaccctaatttcta 44700624  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  44700625 cccattttcccaatctcaccaatgaacaagacactcaatgatt 44700667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 51398935 - 51398793
Alignment:
Q  153 aatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    |||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| |||| |||||| |||||||||||||    
T  51398935 aatctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagttcactaagaac-aaccctaatttct 51398837  T
Q  253 a-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |  ||| ||  |||||||||||||||||||||||||||||||||    
T  51398836 acccatttttccaatctcatcaatgaacaagacactcaatgatt 51398793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 32891224 - 32891082
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||||||||| | |||||||||    
T  32891224 atctctccaatccactatcaacgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttcta 32891125  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| | | ||||||||||||||||||||    
T  32891124 cccattttctcaatctcaccgaagaacaagacactcaatgatt 32891082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 44331665 - 44331524
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | |||||||||| ||||||||||| || ||    ||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  44331665 atctctccaatccactatcaataagttcttacaaagagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttcta 44331567  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||  ||||||| ||||||||||||||||||||||||    
T  44331566 cccattttcctaatctcaccaatgaacaagacactcaatgatt 44331524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 7764584 - 7764446
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| ||| |||||| ||||||||||| ||||||||||||||    
T  7764584 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattagctttaacaagttcacaaagaac-aaccctaatttcta 7764486  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | | ||| |  ||||| ||||||||||||||||||||||||    
T  7764485 cccttttccc--tctcaccaatgaacaagacactcaatgatt 7764446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 22835050 - 22835191
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  22835050 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 22835148  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||||||||||||    
T  22835149 cccattttcccaatctcacaaatgaacaagacactcaatgatt 22835191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 155 - 295
Target Start/End: Complemental strand, 5373353 - 5373210
Alignment:
Q  155 tctctccaattcattgtcaataagttt-ttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||| ||||| |||| ||||  ||||||||||| |  |||  ||||||| |||||| |||||||||||||| |||||||||| |||||||||||    
T  5373353 tctctccaatccattggcaatgagttccttacaaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttcta 5373254  T
Q  254 tc--atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     |   | ||| ||||||| |||||||||||||||||||||||||    
T  5373253 cccttttttcccaatctcttcaatgaacaagacactcaatgatt 5373210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 34491332 - 34491197
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  34491332 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 34491234  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||| || |||||||    
T  34491233 cccattttcccaatctcaccaatgaataacacactca 34491197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 43401898 - 43401985
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||| ||| |||||||| ||||||||||||||||||    
T  43401898 gttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcaccaatgaacaagacactca 43401985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 289
Target Start/End: Original strand, 49199516 - 49199653
Alignment:
Q  153 aatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaattt 250  Q
    |||||||||||| || | ||||| |||| ||||||||||| || ||||||  ||||||||||||| |||||||||||||||||||||| |||| ||||||    
T  49199516 aatctctccaatccactatcaatgagttcttacaaagagatac-aaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaattt 49199613  T
Q  251 cta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||  ||| ||| |||||||| ||| ||||||||||||||    
T  49199614 ctacccattttcccaatctcaccaacgaacaagacactca 49199653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 294
Target Start/End: Original strand, 51352206 - 51352298
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaatgat 294  Q
    |||||||||||||| ||| || |||||||||| ||||||||||||| ||||||||| |||  ||||||| |||| ||||||||||||||||||    
T  51352206 gttacaagaaattaactttaaaaagctcacaatgaacaaaccctaacttctatcattttcctaatctcaccaataaacaagacactcaatgat 51352298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 54593824 - 54593689
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct- 252  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||| |||||| |||||||||||||||||||||| |||||||||||||     
T  54593824 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaataaattagcttcaacaagctcacaaagaac-aaccctaatttctg 54593726  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  54593725 cacattttcccaatctcaccaatgaacaagacactca 54593689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 760967 - 760826
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||| ||||||||||||||||||| | |||||||||||    
T  760967 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaga-cctaatttcta 760869  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||||||||||||    
T  760868 cccattttcccaatctcacaaatgaacaagacactcaatgatt 760826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 4570072 - 4569931
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||| |||||||||| |||| ||||||||||||||    
T  4570072 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaataagctcacaatgaac-aaccctaatttcta 4569974  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||| |||||| |||||||||||||    
T  4569973 cccattttcccaatctcaccaaagaacaaaacactcaatgatt 4569931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 9666562 - 9666656
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||||||||||||||||||||||||  ||||||||||  ||| ||  ||||||||  |||||||||||||||||||||||    
T  9666562 gttacaagaaattagcttcaacaagctcacaaagaacaaaatctaatttctacccatttttccaatctcacaaatgaacaagacactcaatgatt 9666656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 19683937 - 19684078
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  19683937 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 19684035  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  ||||||||||||| |||||||||    
T  19684036 cccattttcccaatctcacaaatgaacaagacattcaatgatt 19684078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 31314565 - 31314424
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||| ||| || ||   |||||||||||||| |||||||||| |||||| |||| ||||||||||||||    
T  31314565 atctctccaatccactatcaaagagttcttacaaaaagatacaaatgggttacaagaaattagcttcaacaagatcacaatgaac-aaccctaatttcta 31314467  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| | ||||||||||||||||||||||    
T  31314466 cccattttctcaatctcacctatgaacaagacactcaatgatt 31314424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 6095647 - 6095782
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||| ||| | ||||||||| ||||||||||||||    
T  6095647 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattaacttcaagaagtttacaaagaac-aaccctaatttcta 6095745  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
     |||| ||| |||||||| ||||||| ||||||||||    
T  6095746 ctcattttcccaatctcaccaatgaataagacactca 6095782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 5258194 - 5258334
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |    
T  5258194 ctctccaatccactatcaatgagttcttccaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 5258292  T
Q  256 --atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
       | ||| |||||||| ||||||||||||||||||||||||    
T  5258293 cttttttcccaatctcaccaatgaacaagacactcaatgatt 5258334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 23392005 - 23392098
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||||||||| |||| ||| ||| |||| ||||||| |||||||| |||||||    
T  23392005 gttacaagaaattatcttaaacaagctcacaaagaacaaa-cttaatttctactcattttcccaaactcaccaatgaaaaagacactaaatgatt 23392098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 37408578 - 37408441
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  37408578 atctcttcaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 37408480  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaat 291  Q
      | | ||| |||||||| ||||||||||||||||||||    
T  37408479 ccctttttcccaatctcaccaatgaacaagacactcaat 37408441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 53921599 - 53921692
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| |||||||||||||| |||||| |||||||||||  ||| ||  |||||||| ||||||||||||||||||||||||    
T  53921599 gttacaagaaattagctttaacaagctcacaaacaacaaa-cctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgatt 53921692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 23200188 - 23200326
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    |||||||||||| | ||||| |||| ||||||| ||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||| |||||||||| |    
T  23200188 ctctccaattcactatcaatgagttcttacaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aactctaatttctacc 23200286  T
Q  256 a-tgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | | ||| |||||||| ||| ||||||||||||||||||||    
T  23200287 atttttcccaatctcaccaa-gaacaagacactcaatgatt 23200326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 29810988 - 29810847
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||| ||||||||||    
T  29810988 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aactctaatttcta 29810890  T
Q  254 tcatgttctc--aatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| || ||  ||||||| ||||||| |||||| |||||||||    
T  29810889 -catattttcctaatctcaccaatgaataagacattcaatgatt 29810847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 43403841 - 43403928
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||| | |||||||||||||||||||||| || |||||||||||  ||| ||| |||||||| ||||||||||||||||||    
T  43403841 gttacaagaaatgagcttcaacaagctcacaaagaac-aagcctaatttctacccattttcccaatctcaccaatgaacaagacactca 43403928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 47304323 - 47304236
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    ||||||||| |||| |||||||||||||||||||||| |||| |||||||||  ||| ||||||||||||  |||||||||||||||||    
T  47304323 gttacaagatattaacttcaacaagctcacaaagaac-aaccataatttctacccattttctcaatctcacaaatgaacaagacactca 47304236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 46173477 - 46173379
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| | || ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  46173477 atctctccaatccactatcaatgaattcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 46173379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 5260373 - 5260513
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |    
T  5260373 ctctccaatccactatcaatgagttcttccaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 5260471  T
Q  256 --atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
       | ||| |||||||| |||||| |||||||||||||||||    
T  5260472 cttttttcccaatctcaccaatgaccaagacactcaatgatt 5260513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 9636176 - 9636316
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| ||||||| ||| || |||  ||||||||||||||  ||  ||||| ||||||||||| |||||||||||||| |    
T  9636176 ctctccaatccactatcaatgagttcttacaaaaagatacaaaagggttacaagaaattagttttgacaagttcacaaagaac-aaccctaatttctacc 9636274  T
Q  256 atgttct--caatctcatcaatgaacaagacactcaatgatt 295  Q
     | ||||  |||||||| |||||| |||||||||||||||||    
T  9636275 cttttctcccaatctcaccaatgaccaagacactcaatgatt 9636316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 16499149 - 16499009
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| |  ||   || ||||||||||| |||||||||||| ||||| ||||| ||||||||||||    
T  16499149 atctctccaatccactatcaatgagttcttacaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaa-aacaa-ccctaatttcta 16499052  T
Q  254 tca-tgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||  | ||| ||||||||  |||||||||||||||||||||||    
T  16499051 tccgttttcccaatctcacaaatgaacaagacactcaatgatt 16499009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 29682479 - 29682338
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   || ||||||||||| ||| ||||||||||||||||||||| | |||||||||    
T  29682479 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaa-cataatttcta 29682381  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  ||| |||||||||||||||||||    
T  29682380 cccattttcccaatctcacaaataaacaagacactcaatgatt 29682338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 39153457 - 39153550
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| ||||||||||||| ||||||| |||||||||||  ||| ||| ||||||||   ||||||||||||||||||||||    
T  39153457 gttacaagaaattagcttaaacaagctcacaatgaacaaa-cctaatttctacccattttcccaatctcacacatgaacaagacactcaatgatt 39153550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 9581402 - 9581262
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||| ||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  9581402 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 9581304  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     |   |||  |||| ||  |||||||||||||||||||||||    
T  9581303 cccatttccgaatcccacaaatgaacaagacactcaatgatt 9581262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 23197989 - 23198127
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    |||||||||||| | ||||| |||| ||||||| ||| || |||  |||||||||||||| |||  ||||| ||||||| ||| ||| |||||||||| |    
T  23197989 ctctccaattcactatcaatgagttcttacaaaaagatacaaaagggttacaagaaattagctttgacaagttcacaaaaaac-aactctaatttctacc 23198087  T
Q  256 a-tgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | | ||| |||||||| ||| ||||||||||||||||||||    
T  23198088 atttttcccaatctcaccaa-gaacaagacactcaatgatt 23198127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 41819619 - 41819706
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||||| |||  ||||||||||||| ||| ||||||||||||||  ||| ||| |||||||| ||||||||||||||||||    
T  41819619 gttacaagaaattagcttagacaagctcacaaaaaac-aaccctaatttctacccattttcccaatctcaccaatgaacaagacactca 41819706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 253
Target Start/End: Original strand, 28253363 - 28253414
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  28253363 gttacaagaaattaacttcaacaagctcacaatgaacgaaccctaatttcta 28253414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 35138781 - 35138895
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctc-atcaatgaac 279  Q
    |||||||||||| || |||  ||| |||||||||| ||||||||| ||||| ||||||||| | ||||||||| |   |||||||||||  || ||||||    
T  35138781 tttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaa-cataatttctacccatttctcaatctctttccatgaac 35138879  T
Q  280 aagacactcaatgatt 295  Q
    ||||||||||||||||    
T  35138880 aagacactcaatgatt 35138895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 36018924 - 36018838
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactc 288  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||| |  ||| ||| |||| ||| ||||||||||| |||||    
T  36018924 gttacaagaaattaacttcaacaagctcacaaagaac-aaccctaatttcaacccattttcccaatttcaccaatgaacaagtcactc 36018838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 26386597 - 26386670
Alignment:
Q  222 acaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||||||||||| ||||||||| | || ||| ||||||||  |||||||||||||||||||||||    
T  26386597 acaagctcacaaagaacaaacc-taatttctacccattttcccaatctcacaaatgaacaagacactcaatgatt 26386670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 29813135 - 29813042
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||||||||| ||||||||||| |||||||||||||| | || ||  |||||||| |||| |||||| | ||||||||||    
T  29813135 gttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacctatttttccaatctcaccaattaacaagcccctcaatgatt 29813042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 289
Target Start/End: Original strand, 31340272 - 31340384
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaat 275  Q
    |||| ||||||||||| || ||   |||||| ||||||| |||||||||||||||||||||| ||||  |||||||| | || ||| |||||||| ||||    
T  31340272 agttcttacaaagagatacaaatgagttacatgaaattagcttcaacaagctcacaaagaac-aacctcaatttctaccaattttcccaatctcaccaat 31340370  T
Q  276 gaacaagacactca 289  Q
    |||||| |||||||    
T  31340371 gaacaaaacactca 31340384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 269
Target Start/End: Original strand, 54739065 - 54739116
Alignment:
Q  218 ttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctc 269  Q
    ||||||||||||||||||||||||| |||||||||| ||| || ||||||||    
T  54739065 ttcaacaagctcacaaagaacaaacactaatttctaccattttttcaatctc 54739116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 286
Target Start/End: Original strand, 8166532 - 8166636
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaac 279  Q
    |||||||||||| || |||| |||| |||| |||| ||||||||| ||| | ||||||||| ||||||||||| |||| || |||||||| || ||||||    
T  8166532 tttacaaagagatacaaaaaggttataagatattaacttcaacaaactctccaagaacaaa-cctaatttctactcat-ttatcaatctcttccatgaac 8166629  T
Q  280 aagacac 286  Q
    |||||||    
T  8166630 aagacac 8166636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 295
Target Start/End: Original strand, 2075174 - 2075246
Alignment:
Q  224 aagctcacaaagaacaaaccctaatttctatcatgtt-ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||||| ||| |||||| ||| ||| || | |||| ||| ||||||||||||||||||||||||    
T  2075174 aagctcacaaagaaccaactctaattactaccatttttcccaatatcaccaatgaacaagacactcaatgatt 2075246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 294
Target Start/End: Original strand, 26323147 - 26323262
Alignment:
Q  179 tttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcat-caatga 277  Q
    ||||||| |||| | || |||| |||||||||||||| ||||||||| |||   || |||||| |||||||| || | | ||||||||||||| | ||||    
T  26323147 tttttaccaagatatacaaaaaggttacaagaaattagcttcaacaaactcttcaaaaacaaa-cctaatttttacccttttctcaatctcatcccatga 26323245  T
Q  278 acaagacactcaatgat 294  Q
    |||||||||| ||||||    
T  26323246 acaagacacttaatgat 26323262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 32744532 - 32744572
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaac 242  Q
    |||||||||||||| ||| ||||||||||||||||||||||    
T  32744532 gttacaagaaattagcttaaacaagctcacaaagaacaaac 32744572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 6716577 - 6716504
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  6716577 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 6716504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 54635202 - 54635129
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  54635202 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 54635129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 253
Target Start/End: Original strand, 25517091 - 25517120
Alignment:
Q  224 aagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||||||||||||||||||||||    
T  25517091 aagctcacaaagaacaaaccctaatttcta 25517120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 40519273 - 40519382
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaaca 280  Q
    |||||||||||| || ||||| ||||||||||||| |||||||||    | ||||||||||| |||||||||||  | |||  ||| ||  ||||||| |    
T  40519273 tttacaaagagatac-aaaatattacaagaaattaacttcaacaa----ataaagaacaaactctaatttctattgttttcctaatatctccaatgaata 40519367  T
Q  281 agacactcaatgatt 295  Q
    ||||| |||||||||    
T  40519368 agacattcaatgatt 40519382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 55302079 - 55302127
Alignment:
Q  204 tacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||| ||||||||| || ||||||||| ||||||||||||||    
T  55302079 tacaagaaattagcttcaacaaacttacaaagaac-aaccctaatttcta 55302127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 4386925 - 4386876
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||||| ||| ||  ||||||||||||||||| |||||||||||    
T  4386925 gttacaagaaattagcttaaa--agctcacaaagaacaaaacctaatttcta 4386876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 255
Target Start/End: Original strand, 25491069 - 25491116
Alignment:
Q  207 aagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||| | ||||||||||||| ||||||||||| |||||||||||||    
T  25491069 aagaaatcagcttcaacaagctctcaaagaacaaa-cctaatttctatc 25491116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 8e-30; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 30291679 - 30291585
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||  ||| |||||||||||| ||||||||||||||||||||||||    
T  30291679 gttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctcaccaatgaacaagacactcaatgatt 30291585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 34254379 - 34254519
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | |||||||||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  34254379 atctctccaatccactatcaataagttcttacaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaac-aaccctaatttcta 34254477  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | | ||| |||||||| ||||||||||||||||||||||||    
T  34254478 cccttttcccaatctcaccaatgaacaagacactcaatgatt 34254519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 15212906 - 15212765
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| |||| ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  15212906 atctctccaatccattatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 15212808  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| |||||||||||||| |||||||||    
T  15212807 cccattttcccaatctcaccaatgaacaagacattcaatgatt 15212765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 8965739 - 8965880
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||| || || | ||||| |||| ||||||||||| |  |||  |||| ||||||||| ||||||||| |||| ||||||||||||||||||||||    
T  8965739 atctctccgatgcactatcaatgagttcttacaaagagatataaaagggttataagaaattaacttcaacaaactcataaagaacaaaccctaatttcta 8965838  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | | ||| |||||||| ||||||||||||||||||||||||    
T  8965839 cctttttcccaatctcaccaatgaacaagacactcaatgatt 8965880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 34256555 - 34256695
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| ||||||||||||    
T  34256555 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaa-ccctaatttcta 34256653  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| ||  |||||||| ||||||||||||||||||||||||    
T  34256654 ccatttttccaatctcaccaatgaacaagacactcaatgatt 34256695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 291
Target Start/End: Complemental strand, 3772312 - 3772175
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||||| || ||||||||| | || ||   |||||||||||||| ||| || |||||||||||||||||| |||||||||||    
T  3772312 atctctccaatccactatcaataaattcttacaaagatatacaaatgagttacaagaaattagcttaaataagctcacaaagaacaaa-cctaatttcta 3772214  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaat 291  Q
    || || |||||||||||| ||||||||||||||||||||    
T  3772213 tcaattttctcaatctcaccaatgaacaagacactcaat 3772175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 4731778 - 4731637
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||||||||||  ||||||||||||||||||| | ||||||||||||||    
T  4731778 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattaggttcaacaagctcacaaagagc-aaccctaatttcta 4731680  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  4731679 cccattttcccaatctcaccaatgaacaagacactcaatgatt 4731637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 27811370 - 27811257
Alignment:
Q  182 ttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaaca 280  Q
    ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||| ||| |||||||| |||||||||    
T  27811370 ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcaccaatgaaca 27811272  T
Q  281 agacactcaatgatt 295  Q
    |||||||||||||||    
T  27811271 agacactcaatgatt 27811257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 40321200 - 40321059
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||||||||||||||| || ||   |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  40321200 atctctccaatccactatcaaagagtttttacaaagagatactaatgggttacaagaaattaacttcaacaagctcacaatgaac-aaccctaatttcta 40321102  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| | ||||||||||||||||||||||    
T  40321101 cccattttcccaatctcacctatgaacaagacactcaatgatt 40321059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 4283644 - 4283509
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  4283644 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttcta 4283546  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  4283545 cccattttcccaatctcaccaatgaacaagacactca 4283509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 42498314 - 42498172
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||| | || |||  |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  42498314 atctctccaatccactatcaatgagttcttacaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 42498216  T
Q  254 --tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      |  | ||| |||||||| ||||||||||||||||||||||||    
T  42498215 cctttttttcccaatctcaccaatgaacaagacactcaatgatt 42498172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 18141892 - 18141800
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||||||||||||||||||||||||  |||||||||||  ||| ||| |||||||| ||||||||||||||||||||||||    
T  18141892 gttacaagaaattagcttcaacaagctcacaaagaacaa--cctaatttctacccattttcacaatctcaccaatgaacaagacactcaatgatt 18141800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 33352270 - 33352129
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||||||||||  ||||||||| ||||||||||| ||||||||||| ||    
T  33352270 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaac-aaccctaattttta 33352172  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  33352171 cccattttcccaatctcaccaatgaacaagacactcaatgatt 33352129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 291
Target Start/End: Original strand, 1292528 - 1292648
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctc 269  Q
    ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||||||||| | |||||||||  ||| |||||||||||    
T  1292528 tcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cttaatttctacccattttctcaatctc 1292626  T
Q  270 atcaatgaacaagacactcaat 291  Q
    | ||| ||||||||||||||||    
T  1292627 accaaagaacaagacactcaat 1292648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 289
Target Start/End: Original strand, 42435042 - 42435174
Alignment:
Q  157 tctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tc 255  Q
    |||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||  |    
T  42435042 tctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctaccc 42435140  T
Q  256 atgttctcaatctcatcaatgaacaagacactca 289  Q
    || ||  |||||||| ||||||||||||||||||    
T  42435141 atttttccaatctcaccaatgaacaagacactca 42435174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 44353896 - 44353772
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctc 269  Q
    ||||| |||| ||||||||||| || ||  ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||  ||| ||| |||||||    
T  44353896 tcaatgagttcttacaaagagatacaaatgtgttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttctacccattttcccaatctc 44353798  T
Q  270 atcaatgaacaagacactcaatgatt 295  Q
    |  ||||||||||| |||||||||||    
T  44353797 acaaatgaacaagatactcaatgatt 44353772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 18655520 - 18655385
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||| ||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  18655520 atctctctaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttcta 18655422  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| |||||||||||| |||||||||| |||||||    
T  18655421 cccattttctcaatctcaccaatgaacaaaacactca 18655385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 291
Target Start/End: Original strand, 19491770 - 19491884
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaat 275  Q
    |||| ||||||||||| || ||   ||||||||||||||  |||||||||||||||||||||||| |||||||||||  ||| ||| |||||||| ||||    
T  19491770 agttcttacaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaa-cctaatttctacccattttcccaatctcaccaat 19491868  T
Q  276 gaacaagacactcaat 291  Q
    ||||||||||||||||    
T  19491869 gaacaagacactcaat 19491884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 43036543 - 43036402
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||| ||| || | ||||| |||| ||||||||||| || ||    |||||||||||||  ||||||||| ||||||||||||| ||||||||||||    
T  43036543 atctctcaaatccactatcaatgagttcttacaaagagatacaaatgaattacaagaaattagtttcaacaagttcacaaagaacaa-ccctaatttcta 43036445  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| ||||||||||||||||||||||||    
T  43036444 cccattttcccaatctcaccaatgaacaagacactcaatgatt 43036402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 286
Target Start/End: Complemental strand, 30143460 - 30143328
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  30143460 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 30143362  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacac 286  Q
      ||| ||| ||||||   |||||||||||||||    
T  30143361 cccattttcccaatctggccaatgaacaagacac 30143328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 156 - 291
Target Start/End: Complemental strand, 9765863 - 9765728
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-t 254  Q
    ||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||   |||||||||||||||| ||||||||||||||      
T  9765863 ctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgccaagctcacaaagaac-aaccctaatttctacc 9765765  T
Q  255 catgttctcaatctcatcaatgaacaagacactcaat 291  Q
    ||| ||| |||||||| ||||||||||||||||||||    
T  9765764 cattttcccaatctcaccaatgaacaagacactcaat 9765728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 12702682 - 12702828
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  12702682 atctctccaatccaatatcaatgagttcttacaaagagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 12702780  T
Q  254 ------tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
          |  | ||| |||||||| |||||||||||||||| |||||||    
T  12702781 cccttttttttttcccaatctcaccaatgaacaagacacttaatgatt 12702828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 171 - 295
Target Start/End: Complemental strand, 31218360 - 31218235
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctc--aatct 268  Q
    ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| |||||||||||| ||| || ||  |||||    
T  31218360 tcaatgagttcttccaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctaccattttttcccaatct 31218262  T
Q  269 catcaatgaacaagacactcaatgatt 295  Q
    || ||||||||||||||||||||||||    
T  31218261 caccaatgaacaagacactcaatgatt 31218235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 1822364 - 1822282
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagac 284  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| | ||  |||||||   ||||||||||||    
T  1822364 gttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctctcaaatgaacaagac 1822282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 284
Target Start/End: Complemental strand, 1856809 - 1856727
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagac 284  Q
    |||||||||||||| ||||||||||||||||||||||||||| ||||||||||| | ||  |||||||   ||||||||||||    
T  1856809 gttacaagaaattagcttcaacaagctcacaaagaacaaaccataatttctatcctttttgcaatctctcaaatgaacaagac 1856727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 17982771 - 17982631
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |    
T  17982771 ctctccaatccactatcaatgagttcttccaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaac-aaccctaatttctacc 17982673  T
Q  256 --atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
       | ||| |||||||| ||||||||||||||||||||||||    
T  17982672 cttttttcccaatctcaccaatgaacaagacactcaatgatt 17982631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 10930295 - 10930382
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat-catgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||||| ||||||| |||||||||||| | ||||||||||||||| ||| ||| |||||||| | ||||||||||||||||    
T  10930295 gttacaagaaattagcttcaacgagctcacaaagagc-aaccctaatttctatccattttcccaatctcaccgatgaacaagacactca 10930382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 40221865 - 40221730
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   ||||||||||||||  ||||||||||||||||||||| ||||||||||||||    
T  40221865 atctctccaatccactatcaacgagttcttacaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaac-aaccctaatttcta 40221767  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||  |||||||| ||| ||||||||||||||    
T  40221766 cccattttaccaatctcaccaaagaacaagacactca 40221730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 285
Target Start/End: Complemental strand, 40328900 - 40328768
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||||||  |||||||||||||  || ||||||||||||||||||||| |||||||||    
T  40328900 atctctccaatccactatcaatgagttcttacaaagagatac-aaaatgagttacaagaaattagtttaaacaagctcacaaagaacaaa-cctaatttc 40328803  T
Q  252 ta-tcatgttctcaatctcatcaatgaacaagaca 285  Q
    ||  ||| ||| ||||||||  |||||||||||||    
T  40328802 tacccattttcccaatctcacaaatgaacaagaca 40328768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 1345467 - 1345560
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||||| || |||||||||||| ||||||||||||||  ||| ||| ||||||||  ||||||||||||| |||||||||    
T  1345467 gttacaagaaattagcttcaataaactcacaaagaac-aaccctaatttctacacattttcccaatctcacaaatgaacaagacattcaatgatt 1345560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 1746269 - 1746408
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-- 253  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||      
T  1746269 ctctccaatccactatcaatgagttctt-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 1746366  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |  | || ||||||||| ||||||||||||||||||||||||    
T  1746367 tttttttttcaatctcaccaatgaacaagacactcaatgatt 1746408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 3303718 - 3303859
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| || | ||||| |||| ||||||||||| || ||   ||||||||||||||  || ||||||||||||||||||||| | |||||||||    
T  3303718 atctcttcaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaa-cttaatttcta 3303816  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| |||| ||||||| |||||||||||    
T  3303817 cccattttcccaatctcaccaataaacaagatactcaatgatt 3303859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 5689391 - 5689250
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||  |||||||||||||| ||  ||| |||||||||    
T  5689391 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaagcac-caccttaatttcta 5689293  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  ||||||||| |||||||||||||||||||||||    
T  5689292 cccatttttccaatctcattaatgaacaagacactcaatgatt 5689250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 10929871 - 10929778
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||  ||| |||   |||||| ||| ||||||||||||||||||||    
T  10929871 gttacaagaaattagcttcaacaagctcacaaagaacaaa-cataatttctacccattttccatatctcaccaaagaacaagacactcaatgatt 10929778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 255
Target Start/End: Complemental strand, 10240226 - 10240173
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  10240226 gttacaagaaattagattcaacaagctcacaaagaacaaacccaaatttctatc 10240173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 11384102 - 11383971
Alignment:
Q  157 tctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tc 255  Q
    |||||||| || | |||||  ||| ||||||||||| || ||   |||||||||||||| ||||||||| |||||||||||| ||||||||||||||  |    
T  11384102 tctccaatccagtatcaatgggttcttacaaagagatacaaatgagttacaagaaattagcttcaacaaactcacaaagaac-aaccctaatttctaccc 11384004  T
Q  256 atgttctcaatctcatcaatgaacaagacactca 289  Q
    || ||  ||||||||| |||||||||||||||||    
T  11384003 atttttccaatctcat-aatgaacaagacactca 11383971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 171 - 293
Target Start/End: Original strand, 3231860 - 3231984
Alignment:
Q  171 tcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctc 269  Q
    |||||||||| |||||||||||| || |||  |||| || |||||| ||||||||||||||| ||||||||| |||||||||||   | |||||||||||    
T  3231860 tcaataagttctttacaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctacatttttctcaatctc 3231959  T
Q  270 at-caatgaacaagacactcaatga 293  Q
     | | | |||||||| |||||||||    
T  3231960 ttcctaagaacaagagactcaatga 3231984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 11712076 - 11712191
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcat-caatgaac 279  Q
    |||||||||||| |  |||  ||| |||||||||| ||||||||||||| ||| ||||||| |||||||| ||| || ||||||||||| | ||| ||||    
T  11712076 tttacaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaacctaatttatattattttctcaatctcttccaaagaac 11712175  T
Q  280 aagacactcaatgatt 295  Q
    || | |||||||||||    
T  11712176 aaaagactcaatgatt 11712191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 19945409 - 19945550
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg-ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat 254  Q
    ||||||||| || | ||||| |||| || |||||||| || ||| || ||||||||||||| |||  ||||| ||||||||||| |||| |||||||||     
T  19945409 ctctccaatccactatcaatgagttcttccaaagagatacaaaagtggttacaagaaattagctttgacaagttcacaaagaac-aaccataatttctac 19945507  T
Q  255 c--atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |   | ||| |||||||| ||||||||||||||||||||||||    
T  19945508 ccttttttcccaatctcaccaatgaacaagacactcaatgatt 19945550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Original strand, 41364942 - 41365036
Alignment:
Q  201 tgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||| | || ||| ||||||||    |||||||||||||||||||||    
T  41364942 tgttacaagaaattagcttaaacaaactcacaaagaacaaa-cctaatttctaccaattttcccaatctcagtcttgaacaagacactcaatgatt 41365036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 6599044 - 6598951
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| ||||||||| ||||||||||| | |||||||||  ||| ||| ||||||||  ||||||||||||||| |||||||    
T  6599044 gttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccattttcccaatctcacaaatgaacaagacacttaatgatt 6598951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 6674497 - 6674404
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| ||||||||| ||||||||||| | |||||||||  ||| ||| ||||||||  ||||||||||||||| |||||||    
T  6674497 gttacaagaaattagcttaaacaagctcgcaaagaacaaa-cttaatttctacccattttcccaatctcacaaatgaacaagacacttaatgatt 6674404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 41366662 - 41366803
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | | ||| |||| |||||||| || || || | |||| ||||||||| ||| |||||||| |||||||||||| | |||||||||    
T  41366662 atctctccaatccactataaatgagttcttacaaagggatacaaataggttaaaagaaattagcttaaacaagcttacaaagaacaaa-cataatttcta 41366760  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||||||||||||    |||||||||||||||||||||    
T  41366761 cccattttctcaatctcagtcttgaacaagacactcaatgatt 41366803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 44303973 - 44303832
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| ||| ||||||| || |||   ||||||||||||| |||  ||||| ||||||||||||| || ||||||||| |    
T  44303973 ctctccaatccactatcaatgagttcttaaaaagagatacaaaaggattacaagaaattagctttgacaagttcacaaagaacaa-ccttaatttctacc 44303875  T
Q  256 atgttct---caatctcatcaatgaacaagacactcaatgatt 295  Q
     | || |   |||||||| ||||||||||||||||||||||||    
T  44303874 ctttttttcccaatctcaccaatgaacaagacactcaatgatt 44303832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 290
Target Start/End: Original strand, 18106174 - 18106262
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaa 290  Q
    |||||||||||||| ||||||||||||| |||||||||| |  || |||||||| || ||  |||||||| | |||||||||||||||||    
T  18106174 gttacaagaaattagcttcaacaagctcgcaaagaacaa-ctatagtttctatccatttttccaatctcaccgatgaacaagacactcaa 18106262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 3073921 - 3073981
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaatt 214  Q
    ||||||||||  |||| ||||| |||| ||||||||||| || ||||||||||||||||||    
T  3073921 atctctccaagccattatcaatgagttcttacaaagagatacaaaaatgttacaagaaatt 3073981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 171 - 243
Target Start/End: Complemental strand, 4162600 - 4162528
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaacc 243  Q
    ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| || |||||||||||||    
T  4162600 tcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaacc 4162528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 286
Target Start/End: Complemental strand, 8153799 - 8153752
Alignment:
Q  239 aaaccctaatttctatcatgttctcaatctcatcaatgaacaagacac 286  Q
    ||||||||||||||| ||| |||||||||||| ||||||||| |||||    
T  8153799 aaaccctaatttctaccattttctcaatctcaccaatgaacatgacac 8153752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 4743300 - 4743392
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||  ||| ||||||||| | ||||||||||||||| ||||| ||| | || ||  |||||||| ||||||||||||||||||||||||    
T  4743300 gttacaagattttagcttcaacaaacacacaaagaacaaacc-taatt-ctacccatttttccaatctcaccaatgaacaagacactcaatgatt 4743392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 25690032 - 25689959
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  25690032 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacctttttcccaatctca 25689959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 253
Target Start/End: Original strand, 29796395 - 29796469
Alignment:
Q  179 tttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||| ||  || ||||||||||||||||| | |||||||||| || | ||||||||||| | |||||||    
T  29796395 tttttacaaataggtacaaaaatgttacaagaaatcagcttcaacaagttctccaagaacaaaccttgatttcta 29796469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 41267041 - 41266947
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcat-caatgaacaagacactcaatgatt 295  Q
    ||||||||||||||   |||||||| || | ||||||||| ||||||||||| ||| ||||||| ||| | | | |||||||| |||||||||||    
T  41267041 gttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttctaccattttctcaaactcttcctaagaacaagagactcaatgatt 41266947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 295
Target Start/End: Original strand, 33655402 - 33655493
Alignment:
Q  203 ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||| |||||| | ||||||||| ||| | ||||||||| | |||||||||||   |||| ||| || || ||||||||||||||||||||||    
T  33655402 ttacgagaaatcagcttcaacaaactctctaagaacaaatc-taatttctatctatttcttaatatcttccatgaacaagacactcaatgatt 33655493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 26417436 - 26417295
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26417436 atctctccaatccactatcaacgagttcttacaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaac-aaccctaatttcta 26417338  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  26417337 cccattttcccaatctcaccaatgaacaagacactcaatgatt 26417295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 47673991 - 47674132
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  47673991 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 47674089  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| ||||||||||||||||||||||||    
T  47674090 cccattttctcaatctcaccaatgaacaagacactcaatgatt 47674132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 23555160 - 23555018
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||  || ||| ||||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  23555160 atctctccaatccactatcaatgagttcttacaaagaggtacaaaagtgttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 23555062  T
Q  254 tca--tgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     ||  | ||| |||||||| ||||||||||||||||||||||||    
T  23555061 ccattttttcccaatctcaccaatgaacaagacactcaatgatt 23555018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 1113777 - 1113636
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||  | | ||||| |||| ||||||||||| || ||   |||| ||||||||| |||||||||||||||||||||| ||||||||||||||    
T  1113777 atctctccaatctactatcaatgagttcttacaaagagatacaaatgggttataagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 1113679  T
Q  254 t-catgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | ||| ||||||||||||  |||||||||||||||||||||||    
T  1113678 tccattttctcaatctcacaaatgaacaagacactcaatgatt 1113636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 30024780 - 30024921
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  30024780 atctctccaatccactatcaaagagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttcta 30024878  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| ||||||||||||||||||||||||    
T  30024879 cccattttctcaatctcaccaatgaacaagacactcaatgatt 30024921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 31733017 - 31733158
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  31733017 atctctccaatccagtatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaac-aaccctaatttcta 31733115  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||| ||||| ||||||||||||||||||||||||    
T  31733116 cccattttctcagtctcaccaatgaacaagacactcaatgatt 31733158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 22270093 - 22269958
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  22270093 atctctccaatccactatcaatcagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 22269995  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  22269994 cccattttcccaatctcaccaatgaacaagacactca 22269958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 4253576 - 4253718
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    ||||||| ||| |||| ||||| |||| ||| |||||||| |  |||  |||||| ||||||| ||||||||||||||||||||||||||||||||||||    
T  4253576 atctctctaatccattatcaatgagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaaccctaatttct 4253675  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | ||| ||  |||| ||| |||||||||||| |||||||||||    
T  4253676 accattttaccaatttcaccaatgaacaagaaactcaatgatt 4253718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 8153462 - 8153321
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||  |||| |||||||||||| ||||||||||||||    
T  8153462 atctctccaatccactatcaatgagttattacaaagagatacaaatgagttacaagaaattagctttgacaatctcacaaagaac-aaccctaatttcta 8153364  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     |||| ||| |||||||| ||||||||||||||||||||||||    
T  8153363 ctcattttcccaatctcaccaatgaacaagacactcaatgatt 8153321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 48491699 - 48491558
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| || |||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  48491699 atctctccaatccactatcaatgagttctttcaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 48491601  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  48491600 cccattttcccaatctcaccaatgaacaagacactcaatgatt 48491558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 29991173 - 29991033
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||| ||||||| || |||  |||||||||||||| |||  ||||| ||||||| ||||| ||||||||||||    
T  29991173 atctctccaatccactatcaatgagttattagaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaataacaa-ccctaatttcta 29991075  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    || | ||| |||||||| ||||||||||||||||||||||||    
T  29991074 tccttttcccaatctcaccaatgaacaagacactcaatgatt 29991033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 4508754 - 4508889
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||| ||||||||||||||| ||||||||||||||    
T  4508754 atctctccaatccactctcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaataagctcacaaagaac-aaccctaatttcta 4508852  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
     |||| ||| |||||||| |||| |||||||||||||    
T  4508853 ctcattttcccaatctcaccaatcaacaagacactca 4508889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 2361037 - 2361155
Alignment:
Q  171 tcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctc 269  Q
    ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||| ||| |||||||    
T  2361037 tcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctc 2361135  T
Q  270 atcaatgaacaagacactca 289  Q
    | ||||||||||||||||||    
T  2361136 accaatgaacaagacactca 2361155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 4586281 - 4586140
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| |  ||   ||||||| |||||| |||||||||| ||||||||||||| ||||||||||||    
T  4586281 atctctccaatccactatcaatgagttcttacaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaa-ccctaatttcta 4586183  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| ||||||||||||||||||||||||    
T  4586182 cccattttcccaatctcaccaatgaacaagacactcaatgatt 4586140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 27347937 - 27347796
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| || |||||||||||    
T  27347937 atctctgcaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aatcctaatttcta 27347839  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  27347838 cccattttcccaatctcaccaatgaacaagacactcaatgatt 27347796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 36146456 - 36146597
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||| ||| || | ||||| |||| ||||||||||| || ||   |||||| ||||||| |||||||||||||||||| ||||||| ||||||||||    
T  36146456 atctctcaaatccactatcaatgagttcttacaaagagatacaaatgggttaca-gaaattagcttcaacaagctcacaaataacaaactctaatttcta 36146554  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  36146555 cccattttcccaatctcaccaatgaacaagacactcaatgatt 36146597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 43864364 - 43864223
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||||||||||||||| || ||   |||||| ||||||| |||||||||| ||||||||||| ||||||||||||||    
T  43864364 atctctccaatccactatcaattagtttttacaaagagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 43864266  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||  ||  |||||||| ||||||||||||||||||||||||    
T  43864265 cccacttttccaatctcaccaatgaacaagacactcaatgatt 43864223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 289
Target Start/End: Complemental strand, 29608854 - 29608722
Alignment:
Q  157 tctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tc 255  Q
    |||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||  |    
T  29608854 tctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctaccc 29608756  T
Q  256 atgttctcaatctcatcaatgaacaagacactca 289  Q
    || ||| |||||||| ||| ||||||||||||||    
T  29608755 attttcccaatctcaccaaagaacaagacactca 29608722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 34310764 - 34310899
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || ||  ||||||||||||||| |||||||||  ||||||||||| ||||||||||||||    
T  34310764 atctctccaatccactatcaatgagttcttacaaaaagatacaaatgtgttacaagaaattagcttcaacaatttcacaaagaac-aaccctaatttcta 34310862  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  34310863 cccattttcccaatctcaccaatgaacaagacactca 34310899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 35854032 - 35853893
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-t 254  Q
    ||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||      
T  35854032 ctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 35853934  T
Q  255 catgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | | ||| |||||||| ||||||||||||||||||||||||    
T  35853933 ctttttcccaatctcaccaatgaacaagacactcaatgatt 35853893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 169 - 295
Target Start/End: Complemental strand, 31518900 - 31518774
Alignment:
Q  169 tgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatc 267  Q
    ||||||| |||| ||||||||||| || ||   ||||||||||| || |||||| |||||||||||||||||| ||||||||||| | || ||| |||||    
T  31518900 tgtcaatgagttcttacaaagagatacaaatgagttacaagaaactagcttcaataagctcacaaagaacaaa-cctaatttctacctattttcccaatc 31518802  T
Q  268 tcatcaatgaacaagacactcaatgatt 295  Q
    ||| ||||||||||||||||| ||||||    
T  31518801 tcaccaatgaacaagacactcgatgatt 31518774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 47676207 - 47676325
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaat 275  Q
    |||| ||||||||||| || ||   |||||||||||||| |||||||||  ||||||||||||| |||||||||||| | || |||||||||||| ||||    
T  47676207 agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaa-ccctaatttctacccattttctcaatctcaccaat 47676305  T
Q  276 gaacaagacactcaatgatt 295  Q
    |||||||||||||| |||||    
T  47676306 gaacaagacactcattgatt 47676325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 12097955 - 12098048
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||||||||||||||||| |||| ||||||||||||||  ||| ||| |||||| | ||||||||||||||||||||||||    
T  12097955 gttacaagaaattaacttcaacaagctcacaatgaac-aaccctaatttctacccattttcccaatctaaccaatgaacaagacactcaatgatt 12098048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 14069881 - 14070022
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  14069881 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 14069979  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | ||| |||||||| ||||||||||||||||||||||||    
T  14069980 ccctttttcccaatctcaccaatgaacaagacactcaatgatt 14070022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 14379909 - 14380050
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  14379909 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 14380007  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | ||| |||||||| ||||||||||||||||||||||||    
T  14380008 ccctttttcccaatctcaccaatgaacaagacactcaatgatt 14380050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 295
Target Start/End: Complemental strand, 23344092 - 23343954
Alignment:
Q  157 tctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatca 256  Q
    ||||||||  ||| ||||| |||| | ||||||| | || |||  |||||||||||||| ||||||||||||||||||||| ||||| ||||||||| |     
T  23344092 tctccaatctattatcaatgagttctcacaaagatatactaaagggttacaagaaattagcttcaacaagctcacaaagaataaaccttaatttctaccc 23343993  T
Q  257 tgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | |||  ||||||| |||||||| ||||| |||||||||    
T  23343992 ttttccaaatctcaccaatgaactagacattcaatgatt 23343954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 24525992 - 24526086
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||  |||||||||||||||||||| |||||||||||  ||| ||| |||| ||| ||||||||||||||||||||||||    
T  24525992 gttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccattttcccaatttcaccaatgaacaagacactcaatgatt 24526086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 38671270 - 38671411
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| || | ||||| |||| |||||||| || || ||  |||||||| |||||| ||| |||||||||||||||||| ||||||||||||||    
T  38671270 atctcttcaatccactatcaatgagttcttacaaagtgatacaaatgtgttacaataaattagcttaaacaagctcacaaagaac-aaccctaatttcta 38671368  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||||||||||||    
T  38671369 cccattttcccaatctcacaaatgaacaagacactcaatgatt 38671411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 23565109 - 23565245
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  ||||||||||||||  |||||||||||||||||||||||  |||||||||||    
T  23565109 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaagacctaatttcta 23565208  T
Q  254 tc-atgttctc--aatctcatcaatgaacaagacact 287  Q
     | || || ||  ||||||| ||||||||||||||||    
T  23565209 cctattttttcctaatctcaccaatgaacaagacact 23565245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 3259115 - 3258980
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | |||||  ||||||||||||||| || ||   ||||||| |||||| ||| |||||||||||||||||| ||||||| ||||||    
T  3259115 atctctccaatccactatcaatgggtttttacaaagagatacaaatgagttacaataaattagcttaaacaagctcacaaagaac-aaccctagtttcta 3259017  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  3259016 cccattttcccaatctcaccaatgaacaagacactca 3258980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 6432091 - 6431956
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  6432091 atctctccaatccactatcaacgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aatcctaatttcta 6431993  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||| | ||||||||||||||||||    
T  6431992 cccattttcccaatctaaccaatgaacaagacactca 6431956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 8359364 - 8359500
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||||||  |||||||||||||  || ||||||||||||||||| |||||||||||||    
T  8359364 atctctccaatccactatcaatgagttcttacaaagagatac-aaaatgggttacaagaaattagtttaaacaagctcacaaagaa-aaaccctaatttc 8359461  T
Q  252 ta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    ||  ||| ||| |||||||  ||||||||||||||||||    
T  8359462 tacccattttcccaatctccccaatgaacaagacactca 8359500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 18126760 - 18126623
Alignment:
Q  158 ctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tca 256  Q
    ||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||| |||||| ||||||||||| ||||||||||||||  ||    
T  18126760 ctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttgaacaagttcacaaagaac-aaccctaatttctacaca 18126662  T
Q  257 tgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | ||  |||||||| |||||||||| |||||||||||||    
T  18126661 tttttccaatctcaccaatgaacaaaacactcaatgatt 18126623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 31105441 - 31105582
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| ||   ||||| |||| ||||||| ||| || ||   |||||||||||||| ||||||||||||||||||||| |||  ||||||||||    
T  31105441 atctctccaatccaccatcaatgagttcttacaaaaagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaa-aaaatctaatttcta 31105539  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||||||||||||    
T  31105540 cccattttcccaatctcacaaatgaacaagacactcaatgatt 31105582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 41317482 - 41317623
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||    ||||||||||||| |||  ||||||||||||||||| ||||||||||||||    
T  41317482 atctctccaatccactatcaatgagttcttacaaagggatacaaatggattacaagaaattagctttgacaagctcacaaagaac-aaccctaatttcta 41317580  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| |||||||||||| |||||||||||    
T  41317581 ccaattttcccaatctcaccaatgaacaagagactcaatgatt 41317623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 19502298 - 19502156
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||||||||||| ||| |||| |||||||||    
T  19502298 atctctccaatccactatcaatgagttcttacaaagagatacaaaagagttacaagaaattagctttgacaagctcacaaaaaac-aaccttaatttcta 19502200  T
Q  254 tc--atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     |   | ||| |||||||| || |||||||||||||||||||||    
T  19502199 accttttttcgcaatctcaccactgaacaagacactcaatgatt 19502156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 185 - 253
Target Start/End: Original strand, 22328470 - 22328538
Alignment:
Q  185 caaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||| || |||  |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  22328470 caaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaactctaatttcta 22328538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 285
Target Start/End: Original strand, 48599382 - 48599513
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| || | || |||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  48599382 atctctccaatccactatcaatgagctcttccaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 48599480  T
Q  254 -tcatgttctcaatctcatcaatgaacaagaca 285  Q
      ||| ||| |||| ||| ||||||||||||||    
T  48599481 cccattttcccaatatcaccaatgaacaagaca 48599513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 41649059 - 41649199
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||  ||||||||||||||||||||||| |||||||||    
T  41649059 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcta-aacaagctcacaaagaacaaacc-taatttcta 41649156  T
Q  254 tcatgttctc-aatctcatcaatgaacaagacactcaatgatt 295  Q
     ||  || || |||||||  |||||||||||||||||||||||    
T  41649157 ccaatttttccaatctcacaaatgaacaagacactcaatgatt 41649199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 2390379 - 2390304
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  2390379 agttattacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 2390304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 3904692 - 3904807
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcat-caatgaac 279  Q
    ||||||||||||  | ||| |||||||||||||||  ||||| | |||| ||||||||||| ||||||||||| ||| ||| ||||||| | | | ||||    
T  3904692 tttacaaagagatgcaaaagtgttacaagaaattacattcaataggctctcaaagaacaaaacctaatttctaccattttcccaatctcttcctaagaac 3904791  T
Q  280 aagacactcaatgatt 295  Q
    |||| |||||||||||    
T  3904792 aagagactcaatgatt 3904807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 295
Target Start/End: Complemental strand, 4178863 - 4178753
Alignment:
Q  185 caaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgtt-ctcaatctcatcaatgaacaaga 283  Q
    |||||||| || |||  |||||||||||||| |||   |||| ||||||||||||| |||||||||||| | | || | |||||||| ||||||||||||    
T  4178863 caaagagatacaaaagggttacaagaaattagctttcccaagttcacaaagaacaa-ccctaatttctaccttttttcccaatctcaccaatgaacaaga 4178765  T
Q  284 cactcaatgatt 295  Q
    ||||||||||||    
T  4178764 cactcaatgatt 4178753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 496031 - 496172
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||| ||||||| || ||   ||| |||||||||| ||||||||||||||||||||||  |||||||||||||    
T  496031 atctctccaatccactatcaatgagttcttataaagagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaac-taccctaatttcta 496129  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  ||| ||||| ||||| |||||||    
T  496130 cccattttcccaatctcacaaattaacaaaacactaaatgatt 496172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 240
Target Start/End: Original strand, 32358102 - 32358188
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaa 240  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||| ||||    
T  32358102 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagcacaa 32358188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 48489551 - 48489410
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | | ||| |||| || |||||||| || ||   |||||||||||||| |||||||||| |  |||||||| ||||||||||||||    
T  48489551 atctctccaatccactatgaatgagttattgcaaagagatacaaatgggttacaagaaattagcttcaacaagttttcaaagaac-aaccctaatttcta 48489453  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| |||||||||||||| | |||||||    
T  48489452 cccattttcccaatctcaccaatgaacaagacatttaatgatt 48489410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 210 - 295
Target Start/End: Original strand, 5514113 - 5514198
Alignment:
Q  210 aaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||| ||||||||||||||||||||||||| | |||||||||   | || ||||||||   ||||||||||| |||||||||||    
T  5514113 aaattagcttcaacaagctcacaaagaacaaaacataatttctactcttttttcaatctctcaaatgaacaagaaactcaatgatt 5514198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 253
Target Start/End: Original strand, 36574591 - 36574663
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||| |  |||  |||||||||||||| ||||||||| ||||||||||||||| | |||||||||    
T  36574591 tttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaatttcta 36574663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 4538636 - 4538729
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||| || ||  ||| ||||||||| |||||||||||| | || ||  |||||||| ||||||||||||||||||||||||    
T  4538636 gttacaagaaattagcttaaaaaatttcataaagaacaa-ccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgatt 4538729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 24789919 - 24789865
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaattt 250  Q
    |||||||||||||||||||| |||  ||||| |||||| ||||||||||||||||    
T  24789919 caaaatgttacaagaaattagctttgacaagttcacaatgaacaaaccctaattt 24789865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 249
Target Start/End: Original strand, 2759248 - 2759339
Alignment:
Q  157 tctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatt 249  Q
    |||||||| || | ||||| |||| ||||||||||| |  ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  2759248 tctccaatccactatcaatgagttcttacaaagagatataaatgagttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatt 2759339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 5116725 - 5116626
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    |||||||||||||| | ||||| |||| |||||||||||| || |||   |||||| |||||||||||||||| ||  | ||||||||| ||||||||||    
T  5116725 atctctccaattcactatcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaaactatccaagaacaaa-cctaatttct 5116627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 253
Target Start/End: Complemental strand, 31519022 - 31518925
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || ||||||| |||| ||||||||||| || ||   |||||||| || || |||||| ||||||||| |||||||| |||||||||||    
T  31519022 atctctccaatccactgtcaatgagttcttacaaagagatacaaatgagttacaag-aactagcttcaataagctcacagagaacaaa-cctaatttcta 31518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 1360249 - 1360342
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcat-caatgaacaagacactcaatgatt 295  Q
    |||||||||||||  |||||||||| || | |||| |||| ||||||||||| | | ||| ||||||||| | |||||||||| |||||||||||    
T  1360249 gttacaagaaattcgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 1360342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 20343974 - 20343901
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  20343974 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 20343901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 48408874 - 48408781
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgtt-ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||  ||||| | ||||||||||| |  ||||||||| | | || | |||||||| ||||||||||||||||||||||||    
T  48408874 gttacaagaaattagctttgacaagtttacaaagaacaa-cattaatttctaccctttttcccaatctcaccaatgaacaagacactcaatgatt 48408781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 6360000 - 6360077
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcac 231  Q
    |||||||||||  | | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||    
T  6360000 atctctccaatcaactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcac 6360077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 4510644 - 4510731
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||||| |||||| || |||||||||||| |||| |||||||||  ||| |||  ||||||| |||| |||||| ||||||    
T  4510644 gttacaagaaattagcttcaataaactcacaaagaac-aaccttaatttctacccattttccaaatctcaccaatcaacaaggcactca 4510731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 4512486 - 4512573
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||||| |||||| || |||||||||||| |||| |||||||||  ||| |||  ||||||| |||| |||||| ||||||    
T  4512486 gttacaagaaattagcttcaataaactcacaaagaac-aaccttaatttctacccattttccaaatctcaccaatcaacaaggcactca 4512573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 24514918 - 24514950
Alignment:
Q  263 caatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||| ||||||||||||||||||||||||    
T  24514918 caatctcaccaatgaacaagacactcaatgatt 24514950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 28617233 - 28617184
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||||| ||| ||  ||||||||||||||||| |||||||||||    
T  28617233 gttacaagaaattagcttaaa--agctcacaaagaacaaaacctaatttcta 28617184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 38280919 - 38280867
Alignment:
Q  162 aattcattgtcaataagttttt-acaaagagaaaccaaaatgttacaagaaat 213  Q
    |||| ||||||||| |||| || ||||||||||||||||| ||||||||||||    
T  38280919 aatttattgtcaatgagttcttcacaaagagaaaccaaaaagttacaagaaat 38280867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 8e-30; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 3156985 - 3156844
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  3156985 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 3156887  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| ||||||||||||||||||||||||    
T  3156886 cccattttctcaatctcaccaatgaacaagacactcaatgatt 3156844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 4552685 - 4552826
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| |||| ||||| |||| |||||||| || || ||   |||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  4552685 atctctccaatccattatcaatgagttcttacaaagggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaa-cctaatttcta 4552783  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| ||||||||||||||||||||||||    
T  4552784 cccattttctcaatctcaccaatgaacaagacactcaatgatt 4552826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 49918470 - 49918329
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  49918470 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 49918372  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| ||||||||||||||||||||||||    
T  49918371 cccattttctcaatctcaccaatgaacaagacactcaatgatt 49918329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 928047 - 928166
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttct-caatctcatcaat 275  Q
    ||||||||||||||||  | |||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||| ||| |||     
T  928047 agtttttacaaagagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatttctatcattttttccaatatcaccaaa 928146  T
Q  276 gaacaagacactcaatgatt 295  Q
    |||||||||||||| |||||    
T  928147 gaacaagacactcattgatt 928166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 31659358 - 31659217
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | |||||||||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| | ||||||||||||    
T  31659358 atctctccaatccactatcaataagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-agccctaatttcta 31659260  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||  |||||||| ||||||||||||||||||||||||    
T  31659259 cccatttttccaatctcaccaatgaacaagacactcaatgatt 31659217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 153 - 295
Target Start/End: Original strand, 196955 - 197097
Alignment:
Q  153 aatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct 252  Q
    |||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||| |||||||||||||||||| |||||||||||||    
T  196955 aatctctccaatccactatcaatgagttcttacaaagggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaac-aaccctaatttct 197053  T
Q  253 atc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | | || ||||||||||||  |||||||||||||||||||||||    
T  197054 accaattttctcaatctcacaaatgaacaagacactcaatgatt 197097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 834215 - 834356
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  834215 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttcta 834313  T
Q  254 t-catgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | ||| ||| ||||||||  |||||||||||||||||||||||    
T  834314 tccattttcccaatctcacaaatgaacaagacactcaatgatt 834356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 182 - 295
Target Start/End: Complemental strand, 10925315 - 10925202
Alignment:
Q  182 ttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat-catgttctcaatctcatcaatgaaca 280  Q
    ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||| || ||||||||| |||||||||    
T  10925315 ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccataatttctatccattttttcaatctcaccaatgaaca 10925217  T
Q  281 agacactcaatgatt 295  Q
    |||||||||||||||    
T  10925216 agacactcaatgatt 10925202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 19754615 - 19754479
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  19754615 atctctccaatccactatcaatgagttcttacaaagagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 19754517  T
Q  254 tc--atgttctcaatctcatcaatgaacaagacactca 289  Q
     |   | |||||||||||| ||||||||||||||||||    
T  19754516 cccatttttctcaatctcaccaatgaacaagacactca 19754479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 45644402 - 45644544
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||| |||||||||| |||  |||||||||||||||||||| | |||||||||    
T  45644402 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttgcaagaaattagctttgacaagctcacaaagaacaaaacttaatttcta 45644501  T
Q  254 t-catgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | ||| |||||||||||| |||||||||||||||| |||||||    
T  45644502 tccattttctcaatctcaccaatgaacaagacacttaatgatt 45644544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 50167223 - 50167364
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||||||||||||||| || ||   |||||||||||||| |||  ||||||||||||| ||| ||||||||||||||    
T  50167223 atctctccaatccactatcaatgagtttttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaataac-aaccctaatttcta 50167321  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| ||||||||||||||||||||||||    
T  50167322 ctaattttcccaatctcaccaatgaacaagacactcaatgatt 50167364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 193731 - 193596
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||| | ||||||| ||||||||||||||    
T  193731 atctctccaatccactatcaatgagttattacaaagagatacaaatgagttacaagaaattagcttcaacaagctaataaagaac-aaccctaatttcta 193633  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| |||||||||||| ||||||||||||||||||    
T  193632 cccattttctcaatctcaccaatgaacaagacactca 193596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 11348818 - 11348683
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||| ||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  11348818 atctctccaatccactatcaatgagttcttagaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 11348720  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactca 289  Q
     | || ||| |||||||| ||||||||||||||||||    
T  11348719 ccaattttcccaatctcaccaatgaacaagacactca 11348683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 13547137 - 13547272
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   ||||||||||| || |||||||||||||||||||||| ||||||||||||||    
T  13547137 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaac-aaccctaatttcta 13547235  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  13547236 cccattttcccaatctcaccaatgaacaagacactca 13547272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 153 - 289
Target Start/End: Original strand, 37033119 - 37033256
Alignment:
Q  153 aatctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaattt 250  Q
    |||||||||||| || | ||||| |||| |||||||||||  | ||||||  ||||||||||||| |||||||||||||||||||||| |||||||||||    
T  37033119 aatctctccaatccactatcaatgagttcttacaaagagatgc-aaaatggattacaagaaattagcttcaacaagctcacaaagaac-aaccctaattt 37033216  T
Q  251 cta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||  ||| ||| |||||||| ||||||||||||||||||    
T  37033217 ctacccattttcccaatctcaccaatgaacaagacactca 37033256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 37503605 - 37503743
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| ||   || |||||||||||||| |||||||||| ||||||||||| ||||||||||| ||    
T  37503605 atctctccaatccactatcaatgagttcttacaaagagatac---aaggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaattttta 37503700  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  37503701 cccattttcccaatctcaccaatgaacaagacactcaatgatt 37503743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 47255388 - 47255523
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  47255388 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 47255486  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||  |||||||| ||||||||||||||||||    
T  47255487 cccatttttccaatctcaccaatgaacaagacactca 47255523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 37168418 - 37168282
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||||||  ||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  37168418 atctctccaatccactatcaatgagttcttacaaagagatac-aaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttc 37168321  T
Q  252 ta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    ||  ||| ||| |||||||| ||||||||||||||||||    
T  37168320 tacccattttcccaatctcaccaatgaacaagacactca 37168282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 47115292 - 47115156
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    ||||||||||| || | |||||  ||||||||||||||| || ||||||  ||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  47115292 atctctccaatccactatcaatgggtttttacaaagagatac-aaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttc 47115195  T
Q  252 tatc-atgttctcaatctcatcaatgaacaagacactca 289  Q
    || | || ||| |||||||| ||||||||||||||||||    
T  47115194 taccaattttcccaatctcaccaatgaacaagacactca 47115156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 8550835 - 8550976
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   |||||||||||||| ||| ||||||||||||||||||||| |||||||||||    
T  8550835 atctctccaatccactatcaatgagttcttacaaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaa-cctaatttcta 8550933  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| ||||||||  |||||||||||||||||||||||    
T  8550934 cccattttcccaatctcacaaatgaacaagacactcaatgatt 8550976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 13138072 - 13138163
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||||||||||||||||||||| |  |||||||||||||   || ||||||||| ||||||||||||||||||||||||    
T  13138072 gttacaagaaattagcttcaacaagctcacaaagaacga--cctaatttctatccatttttcaatctcaccaatgaacaagacactcaatgatt 13138163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 28220274 - 28220415
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||||||| ||||||||||||||    
T  28220274 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaac-aaccctaatttcta 28220372  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||  ||||||| ||||||| ||||||||||||||||    
T  28220373 cccattttccgaatctcaccaatgaataagacactcaatgatt 28220415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 28265602 - 28265743
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  28265602 atctctccaatccactatcaaagagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttcta 28265700  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||  ||||||||||||||||||||||||    
T  28265701 cctattttcccaatctcgccaatgaacaagacactcaatgatt 28265743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 37879007 - 37879094
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||| | || ||| |||||||| ||||||||||||||||||    
T  37879007 gttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacctattttcccaatctcaccaatgaacaagacactca 37879094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 42298023 - 42298158
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||| ||| ||||||||||||||    
T  42298023 atctcttcaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaaaaac-aaccctaatttcta 42298121  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactca 289  Q
     | || ||| |||||||| ||||||||||||||||||    
T  42298122 ccaattttcccaatctcaccaatgaacaagacactca 42298158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 7482278 - 7482414
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    |||||||||||||| | ||||| |||| ||||||||||| || ||||||  ||||||||||||| ||| |||||||||||||||||| ||||||||||||    
T  7482278 atctctccaattcactatcaatgagttcttacaaagagatac-aaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttc 7482375  T
Q  252 ta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    ||  ||| | | |||||||| |||||||||| |||||||    
T  7482376 tacccatttacccaatctcaccaatgaacaatacactca 7482414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 177 - 291
Target Start/End: Complemental strand, 41361011 - 41360897
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaat 275  Q
    |||| ||||||||||| || ||   ||||||||||||||  |||||||||||||||||||||||| |||||||||||  ||| ||| |||||||| ||||    
T  41361011 agttcttacaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaa-cctaatttctacccattttcccaatctcaccaat 41360913  T
Q  276 gaacaagacactcaat 291  Q
    ||||||||||||||||    
T  41360912 gaacaagacactcaat 41360897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 154 - 292
Target Start/End: Complemental strand, 44455280 - 44455142
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || ||   ||||||||||||||  ||||||||| ||||||||||| ||||||||||||||    
T  44455280 atctctccaatccactatcaatgagttcttacaaaaagatacaaatgagttacaagaaattagtttcaacaagttcacaaagaac-aaccctaatttcta 44455182  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatg 292  Q
      ||| ||| |||||||| |||||||||||||||||||||    
T  44455181 cccattttcccaatctcaccaatgaacaagacactcaatg 44455142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 28223469 - 28223610
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||| ||||| | |||| |||||||||    
T  28223469 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcagaaagatc-aaccataatttcta 28223567  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| |||||||| ||||||||||||||||||||||||    
T  28223568 cccattttcccaatctcaccaatgaacaagacactcaatgatt 28223610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 295
Target Start/End: Complemental strand, 46064990 - 46064897
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctat-catgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||| ||| ||| ||| ||||||||  |||||||||||||||||||||||    
T  46064990 gttacaagaaattagcttcaacgagctcacaaagaacaaa-cctaatttttatccattttcccaatctcacaaatgaacaagacactcaatgatt 46064897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 19752806 - 19752670
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| |  | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||| |||||||| ||||||||||||||    
T  19752806 atctctccaatcctctatcaatgagttcttacaaagagatacaaatcggttacaagaaattagcttcaacaagctcgcaaagaac-aaccctaatttcta 19752708  T
Q  254 -tcatgtt-ctcaatctcatcaatgaacaagacactca 289  Q
      ||| || |||||||||| ||||||||||||||||||    
T  19752707 cccattttactcaatctcaccaatgaacaagacactca 19752670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 13549048 - 13549183
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||| |||||||  || |||||||||||||||||| ||||||||||||||    
T  13549048 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacatgaaattaggtttaacaagctcacaaagaac-aaccctaatttcta 13549146  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  13549147 cccattttcccaatctcaccaatgaacaagacactca 13549183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 20762792 - 20762650
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||| |||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  20762792 atctctccaatccactatcaatgagttcttacgaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 20762694  T
Q  254 tc--atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     |   | |||||||||||| |||||||||||| |||||||||||    
T  20762693 cccttttttctcaatctcaccaatgaacaagatactcaatgatt 20762650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 289
Target Start/End: Complemental strand, 29136315 - 29136232
Alignment:
Q  206 caagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||  ||| ||| |||||||| ||||||||||||||||||    
T  29136315 caagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcaccaatgaacaagacactca 29136232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 34603648 - 34603561
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||||| ||| |||||||||||||||||| ||||||||||||||  ||| || ||||||||| ||||||||||||||||||    
T  34603648 gttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccattttttcaatctcaccaatgaacaagacactca 34603561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 292
Target Start/End: Original strand, 37282767 - 37282877
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaaca 280  Q
    ||||||||||||  | |||  ||||| | |||||| ||||||||||||||||| |||||||||||||||| || ||| || ||||||||  |||||||||    
T  37282767 tttacaaagagatgcaaaagggttaccataaattagcttcaacaagctcacaaggaacaaaccctaatttataccat-ttttcaatctctccaatgaaca 37282865  T
Q  281 agacactcaatg 292  Q
    ||||||||||||    
T  37282866 agacactcaatg 37282877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 37559916 - 37560058
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatctt-caacaagctcacaaagaacaaaccctaatttct 252  Q
    |||||||||||||| | ||||  |||| ||||||||||| || ||   |||||||||||||| ||| ||||||| ||||||||||||| | |||||||||    
T  37559916 atctctccaattcactatcaacgagttcttacaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaacaa-ctctaatttct 37560014  T
Q  253 atc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | | || |||  ||||||| ||||||||||||||||||||||||    
T  37560015 acccattttcctaatctcaccaatgaacaagacactcaatgatt 37560058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 1833642 - 1833501
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||| ||| |||||| |   ||||||||||||| ||||||||||||    
T  1833642 atctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaatttagcttcaatagattcacaaagaacaa-ccctaatttcta 1833544  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| ||||||||||||||||||||||||    
T  1833543 cccattttcccaatctcaccaatgaacaagacactcaatgatt 1833501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 13659384 - 13659525
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| |  ||   || ||||||||||| |||||||||||| ||||| ||||| ||||||||||||    
T  13659384 atctctccaatccactatcaatgagttcttacaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaaaaacaa-ccctaatttcta 13659482  T
Q  254 tca-tgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||  | ||| ||||||||  |||||||||||||||||||||||    
T  13659483 tccgttttcccaatctcacaaatgaacaagacactcaatgatt 13659525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 15820427 - 15820286
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||| |||| || | ||||| |||| ||| ||||||| || ||  ||||||||||||||| ||||||||||||||||||||||||||| |||||| ||    
T  15820427 atctcttcaatgcactatcaatgagttcttaaaaagagatacaaatgtgttacaagaaattagcttcaacaagctcacaaagaacaaacc-taattttta 15820329  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||  |||| ||| ||| ||||||||||||||||||||    
T  15820328 cccatctttccaatatcaccaaagaacaagacactcaatgatt 15820286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 50169306 - 50169399
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||| |||  ||||||||||||||||||| |||||||||||| | || ||  |||||||| ||||||||||||||||||||||||    
T  50169306 gttacaagaaattagctttgacaagctcacaaagaacaa-ccctaatttctacccatttttccaatctcaccaatgaacaagacactcaatgatt 50169399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 8871144 - 8871229
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacact 287  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||||||||| ||| |||  |||||||  || ||||||||||||    
T  8871144 gttacaagaaattagcttcaacgaactcacaaagaacaaaccctaatttctaccattttccaaatctcacaaaagaacaagacact 8871229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 31925755 - 31925890
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||| |||| | ||||||||||||    
T  31925755 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaac-atccctaatttcta 31925853  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||  || ||||| ||||||||||||||||||    
T  31925854 cccatttttccactctcaccaatgaacaagacactca 31925890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 3189450 - 3189309
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || |||  |||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||    
T  3189450 atctctccaatccactatcaatgagttcttacaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaac-aaccctaatttata 3189352  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | |||  ||||||| |||||||||||||||||| |||||    
T  3189351 ccctttttccaaatctcaccaatgaacaagacactcagtgatt 3189309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 3198267 - 3198126
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || |||  |||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||    
T  3198267 atctctccaatccactatcaatgagttcttacaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaac-aaccctaatttata 3198169  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | |||  ||||||| |||||||||||||||||| |||||    
T  3198168 ccctttttccaaatctcaccaatgaacaagacactcagtgatt 3198126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 3207106 - 3206965
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||| ||| || |||  |||||| ||||||| |||||||||| ||||||||||| ||||||||||| ||    
T  3207106 atctctccaatccactatcaatgagttcttacaaaaagatacaaaagagttacaggaaattagcttcaacaagttcacaaagaac-aaccctaatttata 3207008  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | |||  ||||||| |||||||||||||||||| |||||    
T  3207007 ccctttttccaaatctcaccaatgaacaagacactcagtgatt 3206965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 3847169 - 3847310
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| |||||||| || || ||   ||||||| || ||| ||| ||||| |||||||||||||| ||||||||||||    
T  3847169 atctctccaatccactatcaatgagttcttacaaagggatacaaatgggttacaaaaatttagcttaaacaaactcacaaagaacaa-ccctaatttcta 3847267  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| ||||||||  |||||||||||||||||||||||    
T  3847268 cccattttcccaatctcacaaatgaacaagacactcaatgatt 3847310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 22079437 - 22079348
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaac 242  Q
    ||||||||||| || | ||||| |||| |||||||||||| || |||  |||||||||||||| ||| ||||||||||||||||||||||    
T  22079437 atctctccaatccaatatcaatgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaac 22079348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 181 - 253
Target Start/End: Complemental strand, 3460789 - 3460717
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||| | || |||  ||||||| |||||| |||||||||||||||||||||||||| ||||||||||    
T  3460789 tttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaactctaatttcta 3460717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 16455741 - 16455601
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct- 252  Q
    ||||||||||| || | ||||| |||| ||||| ||||| || ||   |||||||||||||| |||||||||||||||  |||| |||  |||||||||     
T  16455741 atctctccaatccactatcaatgagttcttacacagagatacaaatgggttacaagaaattagcttcaacaagctcac-tagaa-aaaatctaatttctc 16455644  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    | ||| ||  |||||||| ||||||||||||||||||||||||    
T  16455643 accattttaccaatctcaccaatgaacaagacactcaatgatt 16455601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 156 - 291
Target Start/End: Original strand, 23555315 - 23555450
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-t 254  Q
    ||||||||| || | ||||| |||| ||||||||||| || ||   |||| |||||||||  ||||||||| ||||||||||| ||||||||||||||      
T  23555315 ctctccaatccactatcaatgagttcttacaaagagatacaaatgagttataagaaattagtttcaacaagttcacaaagaac-aaccctaatttctacc 23555413  T
Q  255 catgttctcaatctcatcaatgaacaagacactcaat 291  Q
    ||| ||  |||||||| ||| ||| ||||||||||||    
T  23555414 catttttccaatctcaccaaagaataagacactcaat 23555450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 44646881 - 44646969
Alignment:
Q  203 ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaat 291  Q
    |||||| |||||| | | ||||| ||||||||||||||||| |||||| ||   | |||||||||||  ||||||||||||||||||||    
T  44646881 ttacaataaattagcgttaacaaactcacaaagaacaaaccataatttttacatttttctcaatctctccaatgaacaagacactcaat 44646969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 44650260 - 44650348
Alignment:
Q  203 ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcatcaatgaacaagacactcaat 291  Q
    |||||| |||||| | | ||||| ||||||||||||||||| |||||| ||   | |||||||||||  ||||||||||||||||||||    
T  44650260 ttacaataaattagcgttaacaaactcacaaagaacaaaccataatttttacatttttctcaatctctccaatgaacaagacactcaat 44650348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 253
Target Start/End: Original strand, 30476494 - 30476592
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||| |||||| || | ||||| |||| ||||||||||| || ||   ||||||| ||||||||||||||||| ||| ||||||| ||||||||||||||    
T  30476494 atctgtccaatccagtatcaatgagttcttacaaagagatacaaatgggttacaataaattatcttcaacaagttcataaagaac-aaccctaatttcta 30476592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 1050519 - 1050577
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaaca 239  Q
    |||||||||||| || ||||||||||||||||||| |||||| |||||| | |||||||    
T  1050519 tttacaaagagacacaaaaatgttacaagaaattagcttcaataagctctcgaagaaca 1050577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 4535556 - 4535617
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaac 242  Q
    |||||||||||| || ||||||||||||||||||  |||||| |||||| | ||||||||||    
T  4535556 tttacaaagagatacaaaaatgttacaagaaattgacttcaataagctctccaagaacaaac 4535617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 13316402 - 13316498
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  13316402 ctctccaatccactatcaatgagttcttccaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 13316498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 2263022 - 2263106
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaa 237  Q
    |||||| |||| || | |||||||||| |||||||| ||| |  |||  |||||||||||||||||||||||||||||| |||||    
T  2263022 atctcttcaatccactatcaataagttctttacaaaaagatataaaagggttacaagaaattatcttcaacaagctcaccaagaa 2263106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 203 - 253
Target Start/End: Complemental strand, 918487 - 918439
Alignment:
Q  203 ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||||||||  |||| ||||||||||||||||| |||||||||    
T  918487 ttacaagaaattatctt--acaaactcacaaagaacaaaccataatttcta 918439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 295
Target Start/End: Original strand, 9109495 - 9109609
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctcat-caatgaac 279  Q
    |||||||||||| || |||  |||||||||||||| |||||||||| || | ||| | ||| | ||||||||  ||| ||||||||||| | | ||||||    
T  9109495 tttacaaagagatacaaaagggttacaagaaattaacttcaacaagttctccaagta-aaaacttaatttcttccattttctcaatctcctaccatgaac 9109593  T
Q  280 aagacactcaatgatt 295  Q
    ||||||||||| ||||    
T  9109594 aagacactcaaggatt 9109609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 36683762 - 36683712
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||||| ||||||||| ||||||||||| ||| |||||||||||    
T  36683762 gttacaagaaattagcttcaacaaactcacaaagaataaa-cctaatttcta 36683712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 181 - 243
Target Start/End: Complemental strand, 6808545 - 6808483
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaacc 243  Q
    |||||||||||| || |||  |||||||||| ||| ||||||||||||| | |||||||||||    
T  6808545 tttacaaagagatacaaaagagttacaagaagttagcttcaacaagctctccaagaacaaacc 6808483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 9036494 - 9036421
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  9036494 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 9036421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 35109545 - 35109496
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||||| ||| ||  ||||||||||||||||||| |||||||||    
T  35109545 gttacaagaaattagcttaaa--agctcacaaagaacaaaccttaatttcta 35109496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 48260405 - 48260373
Alignment:
Q  182 ttacaaagagaaaccaaaatgttacaagaaatt 214  Q
    ||||||||||||||||||||||||||| |||||    
T  48260405 ttacaaagagaaaccaaaatgttacaataaatt 48260373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 5406248 - 5406388
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| ||||||||||||    
T  5406248 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 5406346  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| ||| |||||||| ||||||||||||||||||||||||    
T  5406347 ccattttcccaatctcaccaatgaacaagacactcaatgatt 5406388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 5410573 - 5410713
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| ||||||||||||    
T  5410573 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttcta 5410671  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| ||| |||||||| ||||||||||||||||||||||||    
T  5410672 ccattttcccaatctcaccaatgaacaagacactcaatgatt 5410713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 4045544 - 4045402
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatg-ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    ||||||||||| || | ||||| |||| |||||||||||| |  |||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||    
T  4045544 atctctccaatccactatcaatgagttatttacaaagagatat-aaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttc 4045446  T
Q  252 tatcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    || ||| ||| |||||||  |||| |||||||||||||||||||    
T  4045445 taccattttcccaatctctccaataaacaagacactcaatgatt 4045402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 9183079 - 9183220
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||  ||||||||||| ||||||||||||||    
T  9183079 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaac-aaccctaatttcta 9183177  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| |||||||||||| ||||||||||||||||||||||||    
T  9183178 cccattttctcaatctcaccaatgaacaagacactcaatgatt 9183220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 5043747 - 5043612
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||  | | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  5043747 atctctccaatctactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 5043649  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
     |||| ||||||||||||  |||||||||||||||||    
T  5043648 ctcattttctcaatctcacgaatgaacaagacactca 5043612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 21589051 - 21588916
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  21589051 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 21588953  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  21588952 cccattttcccaatctcaccaatgaacaagacactca 21588916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 21593784 - 21593649
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  21593784 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 21593686  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| |||||||| ||||||||||||||||||    
T  21593685 cccattttcccaatctcaccaatgaacaagacactca 21593649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 5413442 - 5413582
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| || |||||||||| ||||||||||||    
T  5413442 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaa-ccctaatttcta 5413540  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | | ||| |||||||| ||||||||||||||||||||||||    
T  5413541 cctttttcccaatctcaccaatgaacaagacactcaatgatt 5413582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 31404723 - 31404863
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||||||||||||||    
T  31404723 atctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttcta 31404821  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     ||| ||| ||||||||   ||||||||||||||||||||||    
T  31404822 ccattttcccaatctcactgatgaacaagacactcaatgatt 31404863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 289
Target Start/End: Complemental strand, 17763062 - 17762975
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||  ||| |||||||||||| ||||||||||||||||||    
T  17763062 gttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttctcaatctcaccaatgaacaagacactca 17762975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 2972987 - 2973120
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  2972987 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaa-cctaatttcta 2973085  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacact 287  Q
      ||| ||| |||||||| ||||||||| ||||||    
T  2973086 cccattttcccaatctcaccaatgaacacgacact 2973120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 28137456 - 28137597
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||| | || ||   |||||||||||||| ||| |||||||||||||||||| ||||||||||||||    
T  28137456 atctctccaatccactatcaatgagttcttacaaagaaatacaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttcta 28137554  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      ||| ||| || ||||| ||||||||||||||||||||||||    
T  28137555 cccattttcccattctcaccaatgaacaagacactcaatgatt 28137597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 287
Target Start/End: Original strand, 3808756 - 3808890
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttc 251  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||||||  |||||||||||||  ||||||||||||||||||||| ||||||||||||    
T  3808756 atctctccaatccactatcaatgagttcttacaaagagatac-aaaatgggttacaagaaattagtttcaacaagctcacaaagaac-aaccctaatttc 3808853  T
Q  252 tatc-atgttctcaatctcatcaatgaacaagacact 287  Q
    || | || ||| |||||||| ||||||||||||||||    
T  3808854 tacctattttcccaatctcaccaatgaacaagacact 3808890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 26954334 - 26954474
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| ||  |   |||||||||||||| |||||||||||||||||||||| ||||||||||| ||    
T  26954334 atctctccaatccactatcaatgagttcttacaaagagatacagatgagttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttata 26954432  T
Q  254 tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     ||  ||| ||||||||   ||||||||||||||||||||||    
T  26954433 ccaatttcccaatctcacatatgaacaagacactcaatgatt 26954474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 2171582 - 2171720
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||||| |||||||||||| |    
T  2171582 ctctccaatccactatcaatgagttcttacaaagagatac-aaagggttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacc 2171679  T
Q  256 atgtt-ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    || || | |||||||| ||||||||||||||||||||||||    
T  2171680 atttttcccaatctcaccaatgaacaagacactcaatgatt 2171720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 17758143 - 17758008
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  17758143 atctctccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccctaatttcta 17758045  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||| ||||||||  |||||| ||||||||||    
T  17758044 cccattttcccaatctcacaaatgaagaagacactca 17758008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 33211233 - 33211374
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| |||| | ||| |||| ||||||||||| || ||   | |||||||||||| ||||| |||||||||||||||| |||| |||||||||    
T  33211233 atctctccaatccattataaatgagttcttacaaagagatacaaatgagctacaagaaattaacttcatcaagctcacaaagaac-aaccataatttcta 33211331  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | || ||| |||||||| |||||||||| |||||||||||||    
T  33211332 ccaattttcccaatctcaccaatgaacaaaacactcaatgatt 33211374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 295
Target Start/End: Original strand, 3038974 - 3039092
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc-atgttctcaatctcatcaat 275  Q
    |||| ||||||||||| || ||   |||||||||||||| |||||| |||||||||| |||| |||||||||||||| | || ||| |||||||| ||||    
T  3038974 agttcttacaaagagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaac-aaccctaatttctaccaattttcccaatctcaccaat 3039072  T
Q  276 gaacaagacactcaatgatt 295  Q
    |||||||||| |||||||||    
T  3039073 gaacaagacattcaatgatt 3039092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 30834586 - 30834726
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |    
T  30834586 ctctccaatccactatcaatgagttcttccaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 30834684  T
Q  256 --atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
       | ||| |||||||| ||||||||||||||||||||||||    
T  30834685 cttttttcccaatctcaccaatgaacaagacactcaatgatt 30834726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 289
Target Start/End: Original strand, 22424896 - 22425010
Alignment:
Q  177 agtttttacaaagagaaaccaaaatg--ttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatca 273  Q
    |||| ||||||||||| || ||||||  ||||||||||||| ||| |||||||||||||||||| ||||||||||||||  ||| ||  |||||||| ||    
T  22424896 agttcttacaaagagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaac-aaccctaatttctacccatttttccaatctcacca 22424994  T
Q  274 atgaacaagacactca 289  Q
    | ||||||||||||||    
T  22424995 acgaacaagacactca 22425010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 295
Target Start/End: Original strand, 16452379 - 16452519
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| |  |||  |||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |    
T  16452379 ctctccaatccactatcaatgagttcttccaaagagatatgaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 16452477  T
Q  256 --atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
       | ||| |||||||| ||||||||||||||||||||||||    
T  16452478 cttttttcccaatctcaccaatgaacaagacactcaatgatt 16452519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 16569106 - 16569037
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctca 270  Q
    |||||||||||||| ||| ||||||||||||||||||||| |||||||||||  ||| ||||||||||||    
T  16569106 gttacaagaaattagcttaaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctca 16569037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 26830171 - 26830307
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || ||    ||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  26830171 atctctccaatccactatcaatgagttcttacaaagagatacaaatggattacaagaaattagcttcaacaagctcacaaagaac-aactctaatttcta 26830269  T
Q  254 -tcatgttctcaatctca-tcaatgaacaagacactca 289  Q
      ||| ||  ||||||||  ||||||||||||||||||    
T  26830270 cccatttttccaatctcacccaatgaacaagacactca 26830307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 33160400 - 33160542
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| ||   ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| ||| ||||||||||    
T  33160400 atctctccaatccaccatcaatgagttcttacaaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaac-aactctaatttcta 33160498  T
Q  254 --tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      |  | ||| |||||||| ||||||| ||||||||||||||||    
T  33160499 cctttttttcccaatctcaccaatgaataagacactcaatgatt 33160542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 240
Target Start/End: Original strand, 603159 - 603222
Alignment:
Q  177 agtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaa 240  Q
    |||| ||||||||||| || ||   |||||||||||||| ||||||||||||||||||||||||    
T  603159 agttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaa 603222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 253
Target Start/End: Complemental strand, 16567265 - 16567218
Alignment:
Q  206 caagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||| ||| |||||||||||||| |||||| |||||||||||    
T  16567265 caagaaattagcttaaacaagctcacaaaaaacaaaacctaatttcta 16567218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 16554946 - 16554873
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  16554946 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 16554873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 16631502 - 16631429
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  16631502 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 16631429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 270
Target Start/End: Complemental strand, 27647938 - 27647865
Alignment:
Q  196 caaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctca 270  Q
    ||||| |||||||||||||| ||| | |||| |||||| ||||||||||||||||||| | | ||| ||||||||    
T  27647938 caaaaggttacaagaaattagcttga-caagttcacaatgaacaaaccctaatttctacccttttcccaatctca 27647865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 3072809 - 3072924
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaa-gagaaaccaaaat-gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||| | ||||| |||| ||||||| |||| || ||||  ||||||||||||||  ||  ||||| |||||| |||||| ||||||||||||    
T  3072809 ctctccaattcactatcaatgagttcttacaaaagagatacaaaaagagttacaagaaattagatttgacaagttcacaatgaacaa-ccctaatttcta 3072907  T
Q  254 tcatgttctcaatctca 270  Q
     ||| ||| ||||||||    
T  3072908 ccattttcccaatctca 3072924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 11675 - 11536
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||  ||||| ||||||||||||| |||||||||||| |    
T  11675 ctctccaatccactatcaatgagttcttacaaagagatacaaatgagttacaagaaattagctttgacaagttcacaaagaacaa-ccctaatttctacc 11577  T
Q  256 atgtt-ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    || || | |||||||| ||||||||||||||||||||||||    
T  11576 atttttcccaatctcaccaatgaacaagacactcaatgatt 11536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 114722 - 114581
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| |||| |||||||||    
T  114722 atctctccaatccactatcaatgagttcttacaaagagatacaaaagcgttacaagaaattagctttgacaagttcacaaagaac-aaccttaatttcta 114624  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
      | | ||| |||||||| ||||||||||||||||||||||||    
T  114623 ccctttttcccaatctcaccaatgaacaagacactcaatgatt 114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 253
Target Start/End: Complemental strand, 102502 - 102453
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||||||||||||||||| ||  |||||||||| ||||||||||||||||||    
T  102502 gttacaagaaattatcttaaa--agctcacaaaaaacaaaccctaatttcta 102453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 434651 - 434511
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| ||||||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |    
T  434651 ctctccaatccactatcaatgagttcttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 434553  T
Q  256 atgtt--ctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     | ||  | |||||||| ||||||||||||||||||||||||    
T  434552 ctttttccccaatctcaccaatgaacaagacactcaatgatt 434511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 269
Target Start/End: Original strand, 490396 - 490483
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctcaatctc 269  Q
    |||||||||| | || |||  |||||||||||||| ||||||||||||| | ||||||||| | |||||||||  || |||||||||||    
T  490396 tttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaacaaa-cttaatttctacgattttctcaatctc 490483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 289
Target Start/End: Complemental strand, 7447 - 7312
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    |||| |||||| || | ||||| |||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||||| |||| |||||||||    
T  7447 atctttccaatccactatcaatgagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aaccttaatttcta 7349  T
Q  254 -tcatgttctcaatctcatcaatgaacaagacactca 289  Q
      ||| ||  |||||||| ||||||||||||||||||    
T  7348 cccatttttccaatctcaccaatgaacaagacactca 7312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 80383 - 80466
Alignment:
Q  206 caagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta-tcatgttctcaatctcatcaatgaacaagacactca 289  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||  ||| ||| |||||||| ||||||||||||||||||    
T  80383 caagaaattagcttcaacaagctcacaaagaac-aaccctaatttctacccattttcccaatctcagcaatgaacaagacactca 80466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 149145 - 149286
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||| ||||||||||| |  ||   || ||||||||||| |||||||||||| ||||| ||||| ||||||||||||    
T  149145 atctctccaatccactatcaatgagttcttacaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaaaaacaa-ccctaatttcta 149243  T
Q  254 tca-tgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
    ||  | ||| ||||||||  |||||||||||||||||||||||    
T  149244 tccgttttcccaatctcacaaatgaacaagacactcaatgatt 149286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 289
Target Start/End: Original strand, 18052 - 18186
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttcta 253  Q
    ||||||||||| || | ||||| |||||| ||||||||| || ||   |||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  18052 atctctccaatccactatcaatgagtttt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaac-aaccctaatttcta 18149  T
Q  254 tc-atgttctcaatctcatcaatgaacaagacactca 289  Q
     | || ||| || ||||| |||||||||| |||||||    
T  18150 ccaattttcccactctcaccaatgaacaaaacactca 18186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 20463 - 20604
Alignment:
Q  154 atctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttct- 252  Q
    ||||||||||| || | ||||  |||| ||||||||||| || ||   |||||||||||||| |||||||||| ||||||| |||||| ||||||||||     
T  20463 atctctccaatccaatatcaaagagttcttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaaaaacaaa-cctaatttctg 20561  T
Q  253 atcatgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
     |||| ||| |||||||| ||||||| || | |||||||||||    
T  20562 ctcattttcccaatctcaccaatgaataataaactcaatgatt 20604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 25146 - 25086
Alignment:
Q  181 tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaa 241  Q
    |||||||||||| || |||| |||||||||||||| ||||||||| ||| |||||||||||    
T  25146 tttacaaagagatacaaaaaggttacaagaaattaccttcaacaaactctcaaagaacaaa 25086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 295
Target Start/End: Complemental strand, 10540 - 10469
Alignment:
Q  225 agctcacaaagaacaaaccctaatttctatcatgttct-caatctcatcaatgaacaagacactcaatgatt 295  Q
    |||||||||||||||||||||||||| |||| | || | ||||||||  |||||||||||||||||| ||||    
T  10540 agctcacaaagaacaaaccctaatttatatctttttttccaatctcacaaatgaacaagacactcaaagatt 10469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 295
Target Start/End: Complemental strand, 1033 - 895
Alignment:
Q  156 ctctccaattcattgtcaataagtttttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatc 255  Q
    ||||||||| || | ||||| |||| || |||||||| || |||  |||||||||||||| |||  ||||| ||||||||||| |||||||||||||| |    
T  1033 ctctccaatccactatcaatgagttgtt-caaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaac-aaccctaatttctacc 936  T
Q  256 --atgttctcaatctcatcaatgaacaagacactcaatgatt 295  Q
       | ||| |||||||| ||| ||||||||||||||||||||    
T  935 cttttttcccaatctcaccaa-gaacaagacactcaatgatt 895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 295
Target Start/End: Original strand, 11258 - 11351
Alignment:
Q  202 gttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctatcatgttctc--aatctcatcaatgaacaagacactcaatgatt 295  Q
    ||||||||||||||  ||  ||||| ||||||||||||| |||||||||||| | | |||||  ||||||| ||| ||||||||||||||||||||    
T  11258 gttacaagaaattagattttacaagttcacaaagaacaa-ccctaatttctacccttttctcccaatctcaccaa-gaacaagacactcaatgatt 11351  T

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Target: scaffold0219 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 27490 - 27566
Alignment:
Q  154 atctctccaattcattgtcaataagtt-tttacaaagagaaaccaaaatgttacaagaaattatcttcaacaagctc 229  Q
    ||||||||||| || | |||||||||| |||||||||||| || ||   |||||||||||||| |||||||||||||    
T  27490 atctctccaatccactatcaataagttatttacaaagagatacaaatgagttacaagaaattagcttcaacaagctc 27566  T

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