View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF10045_low_15 (Length: 250)
Name: NF10045_low_15
Description: NF10045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF10045_low_15 |
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Alignment Details
Target: chr4 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 17327724 - 17327484
Alignment:
| Q |
1 |
tctatgaaccctgctaatgcatttggttgggcttatatgaacaataagcacaatacttgggagcaattttatgttttttggatatgtcctttaattggtg |
100 |
Q |
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| T |
17327724 |
tctatgaaccctgctaatgcatttggttgggcttatatgaacaataagcacaatacttgggagcaattttatgttttttggatatgtcctttaattggtg |
17327625 |
T |
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| Q |
101 |
ctagttctgctgctatggtttatcggtttctatttatgtcaccagttaaggagaagaaagcttgagtcgagggacttagttctaaattgcggtccacaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
17327624 |
ctagttctgctgctatggtttatcggtttctatttatgtcaccagttaaggagaagaaagcttgagtcgagggactttgttctaaattgcggtccacaat |
17327525 |
T |
|
| Q |
201 |
cataattatgggcgtatcataaaggttttagaggtctctgc |
241 |
Q |
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||||||||||||||||||||||| ||||||||||||||||| |
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| T |
17327524 |
cataattatgggcgtatcataaaagttttagaggtctctgc |
17327484 |
T |
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