View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF10046_high_5 (Length: 331)

Name: NF10046_high_5
Description: NF10046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF10046_high_5
NF10046_high_5
[»] chr3 (56 HSPs)
chr3 (20-111)||(39609168-39609259)
chr3 (236-320)||(25832750-25832834)
chr3 (236-320)||(41890497-41890581)
chr3 (175-236)||(39609323-39609384)
chr3 (233-320)||(42601721-42601808)
chr3 (266-320)||(42601531-42601585)
chr3 (267-320)||(33934985-33935038)
chr3 (267-320)||(51427094-51427147)
chr3 (259-320)||(46572951-46573013)
chr3 (236-320)||(49823196-49823271)
chr3 (267-320)||(17466508-17466562)
chr3 (267-320)||(25790801-25790855)
chr3 (259-320)||(29701667-29701729)
chr3 (267-320)||(47144166-47144220)
chr3 (260-320)||(4045966-4046027)
chr3 (260-320)||(6048722-6048783)
chr3 (260-320)||(32120464-32120525)
chr3 (260-320)||(44084295-44084356)
chr3 (260-320)||(51999263-51999324)
chr3 (261-320)||(12974655-12974715)
chr3 (261-319)||(26165581-26165640)
chr3 (267-320)||(5845166-5845220)
chr3 (278-320)||(30418455-30418497)
chr3 (278-320)||(41183279-41183321)
chr3 (259-320)||(50415856-50415918)
chr3 (260-320)||(42560887-42560948)
chr3 (257-320)||(138958-139022)
chr3 (260-319)||(35472653-35472713)
chr3 (260-319)||(36178731-36178791)
chr3 (280-320)||(49147314-49147354)
chr3 (260-318)||(10426459-10426518)
chr3 (270-320)||(37410445-37410496)
chr3 (278-320)||(27847414-27847456)
chr3 (279-320)||(37183863-37183904)
chr3 (278-314)||(6832389-6832425)
chr3 (257-320)||(20139343-20139407)
chr3 (269-320)||(25450660-25450712)
chr3 (267-318)||(33748678-33748730)
chr3 (269-320)||(35424035-35424087)
chr3 (261-319)||(11908006-11908065)
chr3 (266-316)||(50017045-50017096)
chr3 (288-319)||(52000089-52000120)
chr3 (282-320)||(744225-744263)
chr3 (278-320)||(7008060-7008102)
chr3 (290-320)||(35853218-35853248)
chr3 (290-320)||(42258334-42258364)
chr3 (290-320)||(43022665-43022695)
chr3 (278-320)||(43473895-43473937)
chr3 (290-320)||(49710415-49710445)
chr3 (282-320)||(50176111-50176149)
chr3 (278-320)||(50734021-50734063)
chr3 (278-320)||(50778792-50778834)
chr3 (281-318)||(15493848-15493885)
chr3 (280-320)||(38572180-38572220)
chr3 (257-312)||(47701097-47701153)
chr3 (261-316)||(49028573-49028629)
[»] chr7 (28 HSPs)
chr7 (234-320)||(22191180-22191266)
chr7 (267-320)||(21654839-21654892)
chr7 (260-320)||(22737621-22737682)
chr7 (267-320)||(30630840-30630893)
chr7 (267-320)||(48984900-48984953)
chr7 (267-320)||(5813090-5813144)
chr7 (267-320)||(35029135-35029189)
chr7 (278-320)||(36518519-36518561)
chr7 (278-320)||(42881362-42881404)
chr7 (261-319)||(32130298-32130357)
chr7 (261-319)||(45549646-45549705)
chr7 (278-320)||(28318069-28318111)
chr7 (278-320)||(30566604-30566646)
chr7 (259-320)||(37951731-37951793)
chr7 (282-320)||(40302517-40302555)
chr7 (259-320)||(47159521-47159582)
chr7 (272-320)||(30720117-30720166)
chr7 (278-319)||(39769733-39769774)
chr7 (261-316)||(24793477-24793533)
chr7 (261-312)||(38970017-38970069)
chr7 (278-320)||(114494-114536)
chr7 (278-320)||(33078811-33078853)
chr7 (261-314)||(35193151-35193205)
chr7 (282-320)||(37887855-37887893)
chr7 (290-320)||(43571120-43571150)
chr7 (264-320)||(25218834-25218891)
chr7 (282-319)||(32748805-32748842)
chr7 (261-312)||(20354209-20354261)
[»] chr8 (31 HSPs)
chr8 (233-320)||(34955692-34955779)
chr8 (233-320)||(26632179-26632267)
chr8 (236-320)||(30470844-30470929)
chr8 (259-320)||(18029525-18029587)
chr8 (259-320)||(38584920-38584982)
chr8 (267-320)||(5212283-5212336)
chr8 (260-320)||(36912401-36912462)
chr8 (267-316)||(42860706-42860755)
chr8 (261-320)||(41477168-41477228)
chr8 (261-320)||(4625520-4625580)
chr8 (260-318)||(8610009-8610068)
chr8 (266-320)||(17741702-17741757)
chr8 (261-319)||(40283460-40283519)
chr8 (261-319)||(43524418-43524477)
chr8 (278-320)||(1958206-1958248)
chr8 (270-320)||(13814942-13814992)
chr8 (267-320)||(43618375-43618429)
chr8 (278-320)||(45101051-45101093)
chr8 (260-320)||(35931846-35931907)
chr8 (279-320)||(42859929-42859970)
chr8 (279-319)||(26244501-26244541)
chr8 (269-320)||(35099428-35099480)
chr8 (261-319)||(13947351-13947410)
chr8 (278-320)||(15053635-15053677)
chr8 (259-320)||(31129529-31129591)
chr8 (267-320)||(5735279-5735332)
chr8 (279-320)||(44503171-44503212)
chr8 (260-319)||(1634868-1634927)
chr8 (278-318)||(43525117-43525157)
chr8 (236-270)||(5735258-5735292)
chr8 (261-312)||(29731680-29731732)
[»] chr1 (33 HSPs)
chr1 (234-320)||(44651030-44651116)
chr1 (267-320)||(643848-643901)
chr1 (271-320)||(44451296-44451345)
chr1 (261-320)||(29523686-29523746)
chr1 (267-320)||(31468122-31468176)
chr1 (259-320)||(44334270-44334332)
chr1 (267-320)||(45239127-45239181)
chr1 (260-320)||(2478354-2478415)
chr1 (264-320)||(8464085-8464142)
chr1 (260-320)||(48388134-48388195)
chr1 (261-320)||(41542313-41542373)
chr1 (259-320)||(3755054-3755116)
chr1 (278-320)||(8468325-8468367)
chr1 (278-320)||(19578936-19578978)
chr1 (267-320)||(27630486-27630540)
chr1 (267-320)||(37420370-37420424)
chr1 (272-320)||(48404324-48404373)
chr1 (265-320)||(17783364-17783420)
chr1 (253-320)||(20584877-20584945)
chr1 (280-320)||(31159390-31159430)
chr1 (278-320)||(23092770-23092812)
chr1 (278-320)||(30878570-30878612)
chr1 (267-320)||(37646586-37646640)
chr1 (278-320)||(45456177-45456219)
chr1 (279-320)||(37691316-37691357)
chr1 (260-320)||(51494498-51494559)
chr1 (234-270)||(643888-643924)
chr1 (280-320)||(29919373-29919413)
chr1 (280-320)||(45623556-45623596)
chr1 (271-320)||(14096684-14096734)
chr1 (259-320)||(36230338-36230400)
chr1 (279-317)||(37822571-37822609)
chr1 (278-319)||(35847148-35847189)
[»] chr6 (16 HSPs)
chr6 (266-320)||(6380515-6380569)
chr6 (258-320)||(8660541-8660604)
chr6 (267-320)||(631509-631563)
chr6 (267-320)||(29428544-29428598)
chr6 (267-320)||(197795-197849)
chr6 (267-320)||(17961290-17961344)
chr6 (267-320)||(34328272-34328326)
chr6 (271-320)||(34838576-34838626)
chr6 (278-318)||(24348436-24348476)
chr6 (278-320)||(10883875-10883917)
chr6 (246-318)||(22627806-22627879)
chr6 (290-320)||(6725651-6725681)
chr6 (259-320)||(8669873-8669935)
chr6 (278-320)||(12501835-12501877)
chr6 (282-320)||(30446251-30446289)
chr6 (282-320)||(32359753-32359791)
[»] chr4 (38 HSPs)
chr4 (236-320)||(47750251-47750335)
chr4 (267-320)||(53184122-53184175)
chr4 (259-320)||(6290584-6290646)
chr4 (259-320)||(34199295-34199357)
chr4 (259-320)||(40721019-40721081)
chr4 (267-320)||(46917537-46917591)
chr4 (260-320)||(3533333-3533394)
chr4 (260-320)||(3618479-3618540)
chr4 (267-320)||(31848800-31848853)
chr4 (261-319)||(45081439-45081498)
chr4 (267-320)||(2215308-2215362)
chr4 (259-320)||(8991767-8991829)
chr4 (278-320)||(38173559-38173601)
chr4 (278-320)||(55560505-55560547)
chr4 (278-320)||(56054021-56054063)
chr4 (278-319)||(4981513-4981554)
chr4 (260-320)||(16020832-16020893)
chr4 (234-309)||(35394875-35394951)
chr4 (259-318)||(39113783-39113843)
chr4 (261-319)||(13094417-13094476)
chr4 (280-319)||(19272789-19272828)
chr4 (261-319)||(35809149-35809208)
chr4 (259-320)||(55941-56003)
chr4 (278-320)||(33523274-33523316)
chr4 (278-316)||(33604661-33604699)
chr4 (278-320)||(54356922-54356964)
chr4 (271-319)||(23389956-23390005)
chr4 (260-320)||(23540452-23540513)
chr4 (278-318)||(33077901-33077941)
chr4 (279-319)||(48403927-48403967)
chr4 (289-320)||(12158153-12158184)
chr4 (278-320)||(13110565-13110607)
chr4 (278-320)||(48506632-48506674)
chr4 (236-270)||(53184162-53184196)
chr4 (279-312)||(18469402-18469435)
chr4 (233-320)||(19409090-19409177)
chr4 (259-318)||(51392215-51392275)
chr4 (280-320)||(52017350-52017390)
[»] chr2 (27 HSPs)
chr2 (233-320)||(927918-928005)
chr2 (266-320)||(9074251-9074305)
chr2 (257-318)||(14152096-14152158)
chr2 (264-320)||(37245491-37245548)
chr2 (259-320)||(7588531-7588593)
chr2 (267-320)||(8852050-8852104)
chr2 (267-320)||(12855012-12855066)
chr2 (267-320)||(24997073-24997127)
chr2 (267-320)||(30822610-30822664)
chr2 (233-320)||(1987075-1987166)
chr2 (260-320)||(22351641-22351702)
chr2 (260-320)||(43021727-43021788)
chr2 (261-319)||(17485804-17485863)
chr2 (267-320)||(4296798-4296852)
chr2 (232-320)||(5146738-5146826)
chr2 (269-320)||(38901715-38901767)
chr2 (261-319)||(17929283-17929342)
chr2 (271-320)||(7763514-7763564)
chr2 (278-320)||(14382972-14383014)
chr2 (278-320)||(36526826-36526868)
chr2 (278-319)||(1308725-1308766)
chr2 (257-312)||(13151519-13151575)
chr2 (261-316)||(36209505-36209561)
chr2 (261-320)||(39490130-39490190)
chr2 (246-320)||(6333404-6333478)
chr2 (282-320)||(31193010-31193048)
chr2 (278-320)||(44279997-44280039)
[»] chr5 (33 HSPs)
chr5 (234-320)||(25032311-25032398)
chr5 (234-320)||(41263320-41263407)
chr5 (259-320)||(8176329-8176391)
chr5 (272-320)||(4577002-4577050)
chr5 (264-312)||(10569844-10569892)
chr5 (269-320)||(31013870-31013922)
chr5 (259-320)||(14278812-14278874)
chr5 (259-320)||(19241299-19241361)
chr5 (259-320)||(27942474-27942536)
chr5 (278-320)||(32976602-32976644)
chr5 (278-320)||(40888897-40888939)
chr5 (278-319)||(25670933-25670974)
chr5 (260-319)||(13479851-13479911)
chr5 (261-319)||(3454721-3454780)
chr5 (261-319)||(29619041-29619100)
chr5 (280-319)||(39238419-39238458)
chr5 (282-320)||(7651010-7651048)
chr5 (278-320)||(25652816-25652858)
chr5 (259-320)||(27407069-27407131)
chr5 (259-320)||(41153032-41153094)
chr5 (278-320)||(42807026-42807068)
chr5 (269-320)||(11954770-11954822)
chr5 (259-318)||(37882457-37882517)
chr5 (261-315)||(4219472-4219527)
chr5 (261-319)||(23089503-23089562)
chr5 (261-319)||(39008465-39008524)
chr5 (278-312)||(9274483-9274517)
chr5 (278-320)||(31008411-31008453)
chr5 (279-316)||(23649198-23649235)
chr5 (279-316)||(23809336-23809373)
chr5 (279-320)||(36572446-36572487)
chr5 (279-320)||(42317892-42317933)
chr5 (290-318)||(36609305-36609333)
[»] scaffold0100 (1 HSPs)
scaffold0100 (237-320)||(30564-30648)
[»] scaffold0054 (1 HSPs)
scaffold0054 (278-320)||(57769-57811)
[»] scaffold0012 (1 HSPs)
scaffold0012 (261-318)||(124001-124059)
[»] scaffold0362 (1 HSPs)
scaffold0362 (278-316)||(5353-5391)
[»] scaffold0016 (1 HSPs)
scaffold0016 (280-319)||(66099-66138)
[»] scaffold0007 (1 HSPs)
scaffold0007 (290-320)||(170662-170692)


Alignment Details
Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 39609168 - 39609259
Alignment:
Q  20 agatgatggagaataagtgttatctatgcttggtaaggtgttttcagaaatagaggagaagtagaagcggttggtttataggaagaaaaata 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39609168 agatgatggagaataagtgttatctatgcttggtaaggtgttttcagaaatagaggagaagtagaagcggttggtttataggaagaaaaata 39609259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 320
Target Start/End: Complemental strand, 25832834 - 25832750
Alignment:
Q  236 agaccatccccaatagtttttaccattcaacaccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||  ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  25832834 agaccatccttaatggtttttaccattcaacaccattcaacaccactttttcaattcccaacacttcacatcattttctctctct 25832750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 236 - 320
Target Start/End: Original strand, 41890497 - 41890581
Alignment:
Q  236 agaccatccccaatagtttttaccattcaacaccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| |||| ||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  41890497 agaccatccacaatggttttcaccattcaacaccattcaacatcactttttcaattcccaacactccacatcattttctctctct 41890581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 175 - 236
Target Start/End: Original strand, 39609323 - 39609384
Alignment:
Q  175 agggtgttaatatcatttgcataatccttcaaaacttacttttgatagagcctcatcaataa 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39609323 agggtgttaatatcatttgcataatccttcaaaacttacttttgatcgagcctcatcaataa 39609384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 233 - 320
Target Start/End: Original strand, 42601721 - 42601808
Alignment:
Q  233 ataagaccatccccaatagtttttaccattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| ||||| |||||| || ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  42601721 ataagaccatctccaatggttttt-cctttcaacaccattcaacacccactttttcaattcccaacactccacatcattttctctctct 42601808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 42601585 - 42601531
Alignment:
Q  266 caccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42601585 caccattcaacaccactttttcaattcccaacactccacatcattttctctctct 42601531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 33934985 - 33935038
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33934985 accattcaacaccactttttcaattcccaacactccacatcattttctctctct 33935038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 51427094 - 51427147
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  51427094 accattcaacaccactttttcaattcccaacactccacatcattttctctctct 51427147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 46573013 - 46572951
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  46573013 cattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctctct 46572951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 320
Target Start/End: Complemental strand, 49823271 - 49823196
Alignment:
Q  236 agaccatccccaatagtttttaccattcaacaccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||| |||||||||||||||         ||||||||||| ||||||||||||||||||||||||||||||||||    
T  49823271 agaccatccccaatggtttttaccattcaa---------acaccactttttcaattcccaacactccacatcattttctctctct 49823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 17466508 - 17466562
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  17466508 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 17466562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 25790855 - 25790801
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  25790855 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 25790801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 29701667 - 29701729
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  29701667 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 29701729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 47144166 - 47144220
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  47144166 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 47144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 4045966 - 4046027
Alignment:
Q  260 attcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  4045966 attcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctct 4046027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 6048783 - 6048722
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  6048783 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 6048722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 32120525 - 32120464
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  32120525 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 32120464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 44084295 - 44084356
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  44084295 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 44084356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 51999324 - 51999263
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  51999324 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 51999263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 12974655 - 12974715
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  12974655 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctct 12974715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 26165640 - 26165581
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  26165640 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctc 26165581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 5845220 - 5845166
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  5845220 accattcaacacccactttttcaattcccaacactccacatcattttatctctct 5845166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 30418497 - 30418455
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  30418497 ccactttttcaattcccaacactccacatcattttctctctct 30418455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 41183279 - 41183321
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  41183279 ccactttttcaattcccaacactccacatcattttctctctct 41183321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 50415918 - 50415856
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  50415918 cattcaacaaccttcaacacccactttttcaatttccaacactccacatcattttctctctct 50415856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 42560887 - 42560948
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| |||||||||||| |||||||||||||||||||||    
T  42560887 attcaacaaccttcaacacccactttttcaattcccaacattccacatcattttctctctct 42560948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 138958 - 139022
Alignment:
Q  257 accattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| || |||||| || ||||| |||||||||||||||||||||||||| |||||||    
T  138958 accattcaacaacactcaacatccgctttttcaattcccaacactccacatcattttgtctctct 139022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 35472713 - 35472653
Alignment:
Q  260 attcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||| ||| ||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  35472713 attcaatacccttcaacatccactttttcaattcccaacactccacattattttctctctc 35472653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 36178791 - 36178731
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||||||| ||||||||| |||||| |||||||||||||| || |||||||||||||||    
T  36178791 attcaacacccttcaacacccactttttcaattcccaacacttcaaatcattttctctctc 36178731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 49147354 - 49147314
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  49147354 actttttcaattcccaacactccacatcattttctctctct 49147314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 10426518 - 10426459
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctct 318  Q
    |||||||| | ||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  10426518 attcaacaaccttcaacacccattttttcaattcccaacactccacatcattttctctct 10426459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 320
Target Start/End: Complemental strand, 37410496 - 37410445
Alignment:
Q  270 attcaacacca-cttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| ||||| |||||||||| |||||||||||||||||||||||    
T  37410496 attcaacaccatctttttcaattcccaatactccacatcattttctctctct 37410445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 27847414 - 27847456
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  27847414 ccactttttcaatttccaacactccacatcattttctctctct 27847456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 37183904 - 37183863
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  37183904 cactttttcaattcctaacactccacatcattttctctctct 37183863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 6832389 - 6832425
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttct 314  Q
    |||||||| ||||||||||||||||||||||||||||    
T  6832389 ccactttttcaattcccaacactccacatcattttct 6832425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 320
Target Start/End: Original strand, 20139343 - 20139407
Alignment:
Q  257 accattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| || |||| ||| |||||| |||||| ||||||| |||||||||||||||||||    
T  20139343 accattcaacaacactcaatacccactttttcaattctcaacacttcacatcattttctctctct 20139407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 25450712 - 25450660
Alignment:
Q  269 cattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| | |||| ||||||||||| ||||||||||||||||||||||    
T  25450712 cattcaacacccattttttcaattcccaacgctccacatcattttctctctct 25450660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 267 - 318
Target Start/End: Original strand, 33748678 - 33748730
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctct 318  Q
    ||||||||||||| | |||| ||||| ||||||||||||||||||||||||||    
T  33748678 accattcaacacctattttttcaatttccaacactccacatcattttctctct 33748730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 35424087 - 35424035
Alignment:
Q  269 cattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| ||| |||| |||||||||||||||||||||||||| |||||||    
T  35424087 cattcaacatccattttttcaattcccaacactccacatcattttttctctct 35424035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 11908006 - 11908065
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||||| |||||| ||||| |||||||||||||||||||| ||||||    
T  11908006 ttcaatacccttcaacacccactttttcaatttccaacactccacatcattttttctctc 11908065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 266 - 316
Target Start/End: Original strand, 50017045 - 50017096
Alignment:
Q  266 caccattcaaca-ccacttttccaattcccaacactccacatcattttctct 316  Q
    |||||||||| | |||||||| ||||||||||||||| ||||||||||||||    
T  50017045 caccattcaaaatccactttttcaattcccaacactctacatcattttctct 50017096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 288 - 319
Target Start/End: Complemental strand, 52000120 - 52000089
Alignment:
Q  288 aattcccaacactccacatcattttctctctc 319  Q
    ||||||||||||||||||||||||||||||||    
T  52000120 aattcccaacactccacatcattttctctctc 52000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 744225 - 744263
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  744225 tttttcaattaccaacactccacatcattttctctctct 744263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 7008060 - 7008102
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||    
T  7008060 ccactttttcaatttccaacactctacatcattttctctctct 7008102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Complemental strand, 35853248 - 35853218
Alignment:
Q  290 ttcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||||||||||||||    
T  35853248 ttcccaacactccacatcattttctctctct 35853218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Original strand, 42258334 - 42258364
Alignment:
Q  290 ttcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||||||||||||||    
T  42258334 ttcccaacactccacatcattttctctctct 42258364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Original strand, 43022665 - 43022695
Alignment:
Q  290 ttcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||||||||||||||    
T  43022665 ttcccaacactccacatcattttctctctct 43022695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 43473895 - 43473937
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||| |||| ||||||||||||||||    
T  43473895 ccactttttcaattcccaacattccagatcattttctctctct 43473937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Complemental strand, 49710445 - 49710415
Alignment:
Q  290 ttcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||||||||||||||    
T  49710445 ttcccaacactccacatcattttctctctct 49710415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 50176149 - 50176111
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  50176149 tttttcaattcccaacactccacatcattttatctctct 50176111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 50734021 - 50734063
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||| |||| |||||||||||||||||||||||    
T  50734021 ccactttttcaatttccaaaactccacatcattttctctctct 50734063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 50778834 - 50778792
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||| |||| |||||||||||||||||||||||    
T  50778834 ccactttttcaatttccaaaactccacatcattttctctctct 50778792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 318
Target Start/End: Complemental strand, 15493885 - 15493848
Alignment:
Q  281 cttttccaattcccaacactccacatcattttctctct 318  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  15493885 ctttttcaattcccaacactccacatcactttctctct 15493848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 38572220 - 38572180
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||| |||||| ||||||||||||| |||||||||||||    
T  38572220 actttttcaattctcaacactccacattattttctctctct 38572180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 47701153 - 47701097
Alignment:
Q  257 accattcaacaccattcaacacc-acttttccaattcccaacactccacatcatttt 312  Q
    |||| |||||| || |||||||| |||||| |||||| |||||||||||||||||||    
T  47701153 accaatcaacaacactcaacacccactttttcaattctcaacactccacatcatttt 47701097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 49028629 - 49028573
Alignment:
Q  261 ttcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctct 316  Q
    ||||| ||| |||||||| |||||||  |||||||||||||||| ||||||||||||    
T  49028629 ttcaatacccttcaacacacacttttttaattcccaacactccatatcattttctct 49028573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 22191180 - 22191266
Alignment:
Q  234 taagaccatccccaatagtttttaccattcaacaccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  22191180 taagaccatccctaatggtttttaccattcaacaccattcaacaccactttttcaatttccaacactccacatcattttctctctct 22191266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 21654839 - 21654892
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  21654839 accattcaacaccactttttcaatttccaacactccacatcattttctctctct 21654892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 22737682 - 22737621
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  22737682 attcaacagcattcaacacccactttttcaattcccaacactccacatcattttctctctct 22737621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 30630893 - 30630840
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||  ||||||||||||||||||| |||||||||||||    
T  30630893 accattcaacaccacttttttaattcccaacactccacattattttctctctct 30630840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 48984900 - 48984953
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||    
T  48984900 accattcaacaccactttttcaatttccaacgctccacatcattttctctctct 48984953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 5813090 - 5813144
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  5813090 accattcaacacccactttttcaattcccaacactgcacatcattttctctctct 5813144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 35029189 - 35029135
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||    
T  35029189 accattcaacacctactttttcaattcccaacattccacatcattttctctctct 35029135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 36518519 - 36518561
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  36518519 ccactttttcaattcccaacactccacatcattttctctctct 36518561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 42881362 - 42881404
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  42881362 ccactttttcaattcccaacactccacatcattttctctctct 42881404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 32130357 - 32130298
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||||| ||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  32130357 ttcaataccatgcaacacccacttttttaattcccaacactccacatcattttctctctc 32130298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 45549705 - 45549646
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||    
T  45549705 ttcaatacccttcaacaaccactttttcaattcccaacactccacatcattttttctctc 45549646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 28318111 - 28318069
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||  |||||||||||||||||||||||||||||||||    
T  28318111 ccacttttttaattcccaacactccacatcattttctctctct 28318069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 30566604 - 30566646
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  30566604 ccactttttcaattctcaacactccacatcattttctctctct 30566646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 37951731 - 37951793
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||||| |||||| ||||||||||||||||| ||||||||| ||||||    
T  37951731 cattcaacaaccttcaacacctactttttcaattcccaacactccatatcattttccctctct 37951793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 40302555 - 40302517
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  40302555 tttttcaattcccaacactccacatcattttctctctct 40302517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 47159582 - 47159521
Alignment:
Q  259 cattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  47159582 cattcaacaaccttcaacatccacttttt-aattcccaacactccacatcattttctctctct 47159521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 30720117 - 30720166
Alignment:
Q  272 tcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  30720117 tcaacacctactttttcaatttccaacactccacatcattttctctctct 30720166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 39769733 - 39769774
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  39769733 ccactttttcaatttccaacactccacatcattttctctctc 39769774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Original strand, 24793477 - 24793533
Alignment:
Q  261 ttcaacaccattcaacaccac-ttttccaattcccaacactccacatcattttctct 316  Q
    ||||||||||||||||||| | |||| ||| ||||||||||||| ||||||||||||    
T  24793477 ttcaacaccattcaacaccccctttttcaagtcccaacactccaaatcattttctct 24793533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 38970017 - 38970069
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcatttt 312  Q
    ||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||    
T  38970017 ttcaacacctttcaacacccactttttcaatttccaacactccacatcatttt 38970069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 114494 - 114536
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||  ||||| |||||||||||||||||||||||||||    
T  114494 ccactttttaaattctcaacactccacatcattttctctctct 114536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 33078853 - 33078811
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||||||||| | |||||||||||||    
T  33078853 ccactttttcaattcccaacactccacgttattttctctctct 33078811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 35193205 - 35193151
Alignment:
Q  261 ttcaacaccattcaacac-cacttttccaattcccaacactccacatcattttct 314  Q
    |||||||  ||||||||| ||||||| |||||||||||||||||||| |||||||    
T  35193205 ttcaacattattcaacactcactttttcaattcccaacactccacataattttct 35193151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 37887855 - 37887893
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| |||||||||||||||||||||||||| |||||||    
T  37887855 tttttcaattcccaacactccacatcattttatctctct 37887893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Complemental strand, 43571150 - 43571120
Alignment:
Q  290 ttcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||||||||||||||    
T  43571150 ttcccaacactccacatcattttctctctct 43571120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 25218891 - 25218834
Alignment:
Q  264 aacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| |||| |||||||| ||||| |||||||| || ||||||||||||||||    
T  25218891 aacaccatttaacatccactttttcaatttccaacacttcatatcattttctctctct 25218834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 319
Target Start/End: Original strand, 32748805 - 32748842
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctc 319  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  32748805 tttttcaattcccaacactccacattattttctctctc 32748842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 20354209 - 20354261
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcatttt 312  Q
    ||||| ||| ||||||||| |||||| ||||||| ||||||||||||||||||    
T  20354209 ttcaatacccttcaacacctactttttcaattcctaacactccacatcatttt 20354261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 34955779 - 34955692
Alignment:
Q  233 ataagaccatccccaatagtttttaccattcaacaccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||| ||||||  | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34955779 ataagaccatccccaatggtttttttctttcaacaccattcaacaccactttttcaattcccaacactccacatcattttctctctct 34955692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 26632267 - 26632179
Alignment:
Q  233 ataagaccatccccaatagtttttaccattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||| |||| ||||  ||||||||||||||||||||||| |||||| ||||||||||||| |||| |||||||||||||||    
T  26632267 ataagaccatcctcaatggtttacaccattcaacaccattcaacacccactttttcaattcccaacacgccacgtcattttctctctct 26632179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 320
Target Start/End: Complemental strand, 30470929 - 30470844
Alignment:
Q  236 agaccatccccaatagtttttaccattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||| ||||  ||||||||||||||||||| | ||| |||| |||||||||||||||||| |||||||||||||||    
T  30470929 agaccatccccaatggtttacaccattcaacaccattcaagatccattttttcaattcccaacactccacgtcattttctctctct 30470844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 18029587 - 18029525
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||    
T  18029587 cattcaacaccattcgacacccactttttcaattcccaacactccacatcattttctctctct 18029525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 38584982 - 38584920
Alignment:
Q  259 cattcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||||||||    
T  38584982 cattcaacaccattcaacacacactttttcaattcccaacactccacgtcattttctctctct 38584920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 5212283 - 5212336
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  5212283 accattcaacaccacttttttaattcccaacactccacatcattttctctctct 5212336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 36912401 - 36912462
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  36912401 attcaacaccattcaacacccactttttcaattcccaacactctacatcattttctctctct 36912462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 316
Target Start/End: Original strand, 42860706 - 42860755
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctct 316  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42860706 accattcaacaccactttttcaattcccaacactccacatcattttctct 42860755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 41477168 - 41477228
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  41477168 ttcaacaccattcaacatccactttttcaattcccaacactccacgtcattttctctctct 41477228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 320
Target Start/End: Complemental strand, 4625580 - 4625520
Alignment:
Q  261 ttcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||| ||||||| ||||||||||||||||| || |||||||||||||    
T  4625580 ttcaacaccattcaacactcactttttcaattcccaacactccaaattattttctctctct 4625520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 260 - 318
Target Start/End: Complemental strand, 8610068 - 8610009
Alignment:
Q  260 attcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctct 318  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||| ||||||||||||||    
T  8610068 attcaacaccattcaacattcactttttcaattcccaacactccatatcattttctctct 8610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 266 - 320
Target Start/End: Original strand, 17741702 - 17741757
Alignment:
Q  266 caccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||    
T  17741702 caccattcaacatccactttttcaattcccaagactccacatcattttctctctct 17741757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 40283460 - 40283519
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  40283460 ttcaatacctttcaacatccactttttcaattcccaacactccacatcattttctctctc 40283519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 43524477 - 43524418
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  43524477 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctc 43524418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 1958248 - 1958206
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  1958248 ccactttttcaattcccaacactccacatcattttctctctct 1958206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 270 - 320
Target Start/End: Original strand, 13814942 - 13814992
Alignment:
Q  270 attcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||||||||    
T  13814942 attcaacactactttttcaatttccaacactccacatcattttctctctct 13814992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 43618429 - 43618375
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  43618429 accattcaacacccactttatcaattcccaacactccacatcattttctctctct 43618375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 45101093 - 45101051
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  45101093 ccactttttcaattcccaacactccacatcattttctctctct 45101051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 35931846 - 35931907
Alignment:
Q  260 attcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||| |||||||| ||||| ||||||||||||||||||||||||||||    
T  35931846 attcaacaaccttcaacatccactttttcaatttccaacactccacatcattttctctctct 35931907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 42859929 - 42859970
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  42859929 cactttttcaattcccaacactccacatcattttctctctct 42859970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 279 - 319
Target Start/End: Original strand, 26244501 - 26244541
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  26244501 cactttttcaattcccaacactccacatcattttctctctc 26244541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 35099428 - 35099480
Alignment:
Q  269 cattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||||||||||||    
T  35099428 cattcaacacccactttttcaattcccaacactctacatcattttctctctct 35099480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 13947351 - 13947410
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  13947351 ttcaatacccttcaacacctactttttcaattcccaacactccacatcattttctttctc 13947410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 15053635 - 15053677
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||||||| |||||||||||||||||    
T  15053635 ccactttttcaattcccaacactccgcatcattttctctctct 15053677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 31129591 - 31129529
Alignment:
Q  259 cattcaacaccattcaacacca-cttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| |||| || ||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  31129591 catttaacaacactcaacaccaactttttcaattctcaacactccacatcattttctctctct 31129529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 5735279 - 5735332
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||| |||||  ||| |||| ||||||||||||||||||    
T  5735279 accattcaacaccactttttcaattttcaatactcgacatcattttctctctct 5735332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 44503171 - 44503212
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  44503171 cactttttcaattcccaacactccacgtcattttctctctct 44503212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 1634927 - 1634868
Alignment:
Q  260 attcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||| ||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  1634927 attcaatacccttcaacactcacttttc-aattctcaacactccacatcattttctctctc 1634868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 43525157 - 43525117
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctct 318  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  43525157 ccactttttcaatttccaacactccacatcattttctctct 43525117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 270
Target Start/End: Original strand, 5735258 - 5735292
Alignment:
Q  236 agaccatccccaatagtttttaccattcaacacca 270  Q
    |||||||||||||| ||||||||||||||||||||    
T  5735258 agaccatccccaatggtttttaccattcaacacca 5735292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 261 - 312
Target Start/End: Original strand, 29731680 - 29731732
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcatttt 312  Q
    ||||| ||| ||||||||| |||||| |||||||||||||||||| |||||||    
T  29731680 ttcaatacccttcaacacccactttttcaattcccaacactccacgtcatttt 29731732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 1e-29; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 44651030 - 44651116
Alignment:
Q  234 taagaccatccccaatagtttttaccattcaacaccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||| ||||||  | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44651030 taagaccatccccaatggtttttttctttcaacaccattcaacaccactttttcaattcccaacactccacatcattttctctctct 44651116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 643901 - 643848
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  643901 accattcaacaccactttttcaattcccaacactccacgtcattttctctctct 643848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 44451345 - 44451296
Alignment:
Q  271 ttcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  44451345 ttcaacaccactttttcaattcccaacactccacatcattttctctctct 44451296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 29523686 - 29523746
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  29523686 ttcaacacccttcaacacccactttttcaattcccaacactccacatcattttctctctct 29523746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 31468122 - 31468176
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  31468122 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 31468176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 44334270 - 44334332
Alignment:
Q  259 cattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||| ||||||||||| |||||||| |||||| |||||||||||||||||||||||||||    
T  44334270 cattcaataccattcaacatccactttttcaattctcaacactccacatcattttctctctct 44334332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 45239127 - 45239181
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  45239127 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 45239181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 2478415 - 2478354
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  2478415 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 2478354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 8464085 - 8464142
Alignment:
Q  264 aacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||    
T  8464085 aacaccattcaacatccactttttcaattctcaacactccacatcattttctctctct 8464142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 48388195 - 48388134
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  48388195 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 48388134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 41542313 - 41542373
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||| ||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  41542313 ttcaacatcattcaacatccactttttcaattcccaacactccacatcatattctctctct 41542373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 3755116 - 3755054
Alignment:
Q  259 cattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||| || |||||||| |||||| |||||||| ||||||||||||||||||    
T  3755116 cattcaacaccattcagcatccactttttcaattctcaacactctacatcattttctctctct 3755054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 8468325 - 8468367
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  8468325 ccactttttcaattcccaacactccacatcattttctctctct 8468367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 19578978 - 19578936
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  19578978 ccactttttcaattcccaacactccacatcattttctctctct 19578936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 27630540 - 27630486
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  27630540 accattcaacacccactttttcaattcccaacactccacatcattttatctctct 27630486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 37420424 - 37420370
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  37420424 accattcaacacccactttttcaattcccaacactccacatcattttatctctct 37420370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 48404324 - 48404373
Alignment:
Q  272 tcaacacca-cttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  48404324 tcaacaccaactttttcaattcccaacactccacatcattttctctctct 48404373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 265 - 320
Target Start/End: Original strand, 17783364 - 17783420
Alignment:
Q  265 acaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||    
T  17783364 acaccattcaacatccacttttttaattcccaacattccacatcattttctctctct 17783420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 253 - 320
Target Start/End: Complemental strand, 20584945 - 20584877
Alignment:
Q  253 ttttaccattcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| ||||||||||  | ||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  20584945 tttttccattcaacaaaactcaacacacactttttcaattcccaacactccacatcattttctcactct 20584877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 31159390 - 31159430
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  31159390 actttttcaattcccaacactccacatcattttctctctct 31159430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 23092770 - 23092812
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||||||||| |||||||||||||||    
T  23092770 ccactttttcaattcccaacactccacgtcattttctctctct 23092812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 30878612 - 30878570
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  30878612 ccactttttcaatttccaacactccacatcattttctctctct 30878570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 37646640 - 37646586
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||| |||||| ||||||  |||||||||||||||||||||||||||||||||    
T  37646640 accatttaacacctacttttttaattcccaacactccacatcattttctctctct 37646586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 45456219 - 45456177
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  45456219 ccactttttcaattcccaacactccacataattttctctctct 45456177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 37691357 - 37691316
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||| |||||||||||||||||||| |||||||||||||    
T  37691357 cactttttcaattcccaacactccacattattttctctctct 37691316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 51494559 - 51494498
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| ||||||  ||||| |||||||||||||||||||||||||||    
T  51494559 attcaacaaccttcaacacccacttttttaattctcaacactccacatcattttctctctct 51494498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 270
Target Start/End: Complemental strand, 643924 - 643888
Alignment:
Q  234 taagaccatccccaatagtttttaccattcaacacca 270  Q
    |||||||||||||||| ||||||||||||||||||||    
T  643924 taagaccatccccaatggtttttaccattcaacacca 643888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 29919373 - 29919413
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||| ||||||||||||||||| ||||||||||||||||    
T  29919373 actttttcaattcccaacactccatatcattttctctctct 29919413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 320
Target Start/End: Complemental strand, 45623596 - 45623556
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  45623596 actttttcaattcctaacactccacatcattttctctctct 45623556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 14096684 - 14096734
Alignment:
Q  271 ttcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| |||||| ||||||||||||||||| |||||||| |||||||    
T  14096684 ttcaacacctactttttcaattcccaacactccaaatcattttatctctct 14096734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 36230338 - 36230400
Alignment:
Q  259 cattcaacaccattcaacacca-cttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| |  ||||||||| ||||| |||||||||||||| ||||||||||| |||||||    
T  36230338 cattcaacaaccctcaacaccaactttttcaattcccaacacttcacatcattttatctctct 36230400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 317
Target Start/End: Original strand, 37822571 - 37822609
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctc 317  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  37822571 cactttttcaattctcaacactccacatcattttctctc 37822609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 35847189 - 35847148
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||||||  |||| |||||||||||||||||||||||||||    
T  35847189 ccacttttttaatttccaacactccacatcattttctctctc 35847148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 6380569 - 6380515
Alignment:
Q  266 caccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6380569 caccattcaacaccactttttcaattcccaacactccacatcattttctctctct 6380515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 258 - 320
Target Start/End: Original strand, 8660541 - 8660604
Alignment:
Q  258 ccattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8660541 ccattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 8660604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 631509 - 631563
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  631509 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 631563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 29428598 - 29428544
Alignment:
Q  267 accattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  29428598 accattcaacatccactttttcaattcccaacactccacatcattttctctctct 29428544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 197795 - 197849
Alignment:
Q  267 accattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  197795 accattcaacatccactttttcaattcccaacactccacgtcattttctctctct 197849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 17961344 - 17961290
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  17961344 accattcaacacccactttttcaattcccaacactccacataattttctctctct 17961290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 34328272 - 34328326
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||| |||||||    
T  34328272 accattcaacacccactttttcaattcccaacactccacatcattttatctctct 34328326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 271 - 320
Target Start/End: Original strand, 34838576 - 34838626
Alignment:
Q  271 ttcaacac-cacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  34838576 ttcaacactcactttttcaattcccaacactccacatcattttctctctct 34838626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 278 - 318
Target Start/End: Original strand, 24348436 - 24348476
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctct 318  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  24348436 ccactttttcaattcccaacactccacatcattttctctct 24348476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 10883875 - 10883917
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||| ||||||||||||||||||||||||||||    
T  10883875 ccactttttcaatttccaacactccacatcattttctctctct 10883917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 246 - 318
Target Start/End: Original strand, 22627806 - 22627879
Alignment:
Q  246 caatagtttttaccattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctct 318  Q
    |||| ||||||  ||||||||| || |||||||| || ||| ||||| ||||||||||||||||||||||||||    
T  22627806 caatggtttttttcattcaacaacactcaacacccacgttttcaatttccaacactccacatcattttctctct 22627879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Complemental strand, 6725681 - 6725651
Alignment:
Q  290 ttcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||||||||||||||    
T  6725681 ttcccaacactccacatcattttctctctct 6725651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 8669873 - 8669935
Alignment:
Q  259 cattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||| |||||||| ||||| |||||||| ||||| |||||||||||||    
T  8669873 cattcaacaaccttcaacatccactttttcaatttccaacacttcacattattttctctctct 8669935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 12501835 - 12501877
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||| ||||| |||||||||||||||||||||    
T  12501835 ccactttttcaattctcaacaatccacatcattttctctctct 12501877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 30446251 - 30446289
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  30446251 tttttcaattcctaacactccacatcattttctctctct 30446289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 32359753 - 32359791
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| |||||||||||| |||||||||||||||||||||    
T  32359753 tttttcaattcccaacattccacatcattttctctctct 32359791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 50; Significance: 1e-19; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 236 - 320
Target Start/End: Complemental strand, 47750335 - 47750251
Alignment:
Q  236 agaccatccccaatagtttttaccattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| ||||||||| |||| |||||||||||||||||||||| |||||||| |||||||| ||||||||| |||||||||||||||    
T  47750335 agacaatccccaatggtttataccattcaacaccattcaacatccactttttcaattccc-acactccacgtcattttctctctct 47750251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 53184175 - 53184122
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  53184175 accattcaacaccactttttcaattcccaacacttcacatcattttctctctct 53184122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 6290584 - 6290646
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  6290584 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 6290646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 34199357 - 34199295
Alignment:
Q  259 cattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34199357 cattcaacaaccttcaacatccactttttcaattcccaacactccacatcattttctctctct 34199295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 40721019 - 40721081
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||  |||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  40721019 cattcaacaatattcaacacccactttttcaattcccaacactccacatcattttctctctct 40721081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 46917591 - 46917537
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  46917591 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 46917537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 3533394 - 3533333
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  3533394 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 3533333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 3618540 - 3618479
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  3618540 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 3618479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 31848853 - 31848800
Alignment:
Q  267 accattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||||||||||||    
T  31848853 accattcaacaccattttttcaatttccaacactccacatcattttctctctct 31848800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 45081498 - 45081439
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  45081498 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctctctc 45081439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 2215362 - 2215308
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  2215362 accattcaacacccactttttcaattcccaacactccacataattttctctctct 2215308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 8991767 - 8991829
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  8991767 cattcaacaaccttcaacacccactttttgaattcccaacactccacatcattttctctctct 8991829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 38173559 - 38173601
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  38173559 ccactttttcaattcccaacactccacatcattttctctctct 38173601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 55560547 - 55560505
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  55560547 ccactttttcaattcccaacactccacatcattttctctctct 55560505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 56054021 - 56054063
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  56054021 ccactttttcaattcccaacactccacatcattttctctctct 56054063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Original strand, 4981513 - 4981554
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  4981513 ccactttttcaattcccaacactccacatcattttctctctc 4981554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 16020832 - 16020893
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  16020832 attcaacaaccttcaacacccactttttcaattcccaacactccacattattttctctctct 16020893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 234 - 309
Target Start/End: Original strand, 35394875 - 35394951
Alignment:
Q  234 taagaccatccccaatagtttttaccattcaacaccattcaacac-cacttttccaattcccaacactccacatcat 309  Q
    ||||||||||||||||||||     |||||||||||||||||||| ||| ||| ||||| |||||||||||||||||    
T  35394875 taagaccatccccaatagttaaacacattcaacaccattcaacacacaccttttcaatttccaacactccacatcat 35394951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 39113843 - 39113783
Alignment:
Q  259 cattcaacaccattcaacacca-cttttccaattcccaacactccacatcattttctctct 318  Q
    ||||||||| || ||||||| | ||||| ||||||||||||||||||||||||||||||||    
T  39113843 cattcaacaacactcaacactaactttttcaattcccaacactccacatcattttctctct 39113783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 13094476 - 13094417
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||||| | |||| |||||||||||||||||||||||||||||||||    
T  13094476 ttcaatacccttcaacacccattttttcaattcccaacactccacatcattttctctctc 13094417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 19272789 - 19272828
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  19272789 actttttcaattcccaacactccacatcattttctctctc 19272828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 35809149 - 35809208
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| |||||||| |||||||||||| ||||||||||||||||||||    
T  35809149 ttcaatacccttcaacatccactttttcaattcccaacattccacatcattttctctctc 35809208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 56003 - 55941
Alignment:
Q  259 cattcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||| ||||| ||||||| ||||| |||||||||| ||||||||||| |||||    
T  56003 cattcaacaccattgaacactcactttttcaatttccaacactccgcatcattttctttctct 55941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 33523274 - 33523316
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||| |||||||||||||||||||||    
T  33523274 ccactttttcaattcccaacattccacatcattttctctctct 33523316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Original strand, 33604661 - 33604699
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctct 316  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  33604661 ccactttttcaattcccaacactccacatcattttctct 33604699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 54356964 - 54356922
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||||||||||||||||||| |||||    
T  54356964 ccactttttcaattcccaacactccacatcattttctttctct 54356922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 319
Target Start/End: Complemental strand, 23390005 - 23389956
Alignment:
Q  271 ttcaacac-cacttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  23390005 ttcaacactcactttttcaattcccaacactccacattattttctctctc 23389956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 23540513 - 23540452
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||| ||||||||| ||||||||||||||||||    
T  23540513 attcaacaaccttcaacacccactttttcaatttccaacactcaacatcattttctctctct 23540452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 33077941 - 33077901
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctct 318  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  33077941 ccactttttcaatttccaacactccacatcattttctctct 33077901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 319
Target Start/End: Complemental strand, 48403967 - 48403927
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||||| ||||| |||||||||||||||||||||||||||    
T  48403967 cactttttcaatttccaacactccacatcattttctctctc 48403927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 289 - 320
Target Start/End: Original strand, 12158153 - 12158184
Alignment:
Q  289 attcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||||||||||||||||    
T  12158153 attcccaacactccacatcattttctctctct 12158184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 13110565 - 13110607
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||| |||||| |||||||    
T  13110565 ccactttttcaattcccaacactccacaacattttttctctct 13110607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 48506674 - 48506632
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||  |||||||||||||||||||||||||||    
T  48506674 ccactttttcaattttcaacactccacatcattttctctctct 48506632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 270
Target Start/End: Complemental strand, 53184196 - 53184162
Alignment:
Q  236 agaccatccccaatagtttttaccattcaacacca 270  Q
    |||||||||||||| ||||||||||||||||||||    
T  53184196 agaccatccccaatggtttttaccattcaacacca 53184162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 312
Target Start/End: Complemental strand, 18469435 - 18469402
Alignment:
Q  279 cacttttccaattcccaacactccacatcatttt 312  Q
    ||||||| ||||||||||||||||||||||||||    
T  18469435 cactttttcaattcccaacactccacatcatttt 18469402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 233 - 320
Target Start/End: Original strand, 19409090 - 19409177
Alignment:
Q  233 ataagaccatccccaatagtttttaccattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||| |||| ||||| |||||| || ||| ||| ||||||||||| |||||| ||||| |||| |||| |||| |||||||||||||    
T  19409090 ataagatcatctccaatggttttt-cctttcgacatcattcaacacccactttttcaatttccaaaactcaacattattttctctctct 19409177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 259 - 318
Target Start/End: Original strand, 51392215 - 51392275
Alignment:
Q  259 cattcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctct 318  Q
    |||||||||  ||||||||| |||||||  ||||| ||||||||||||||||||| |||||    
T  51392215 cattcaacattattcaacacacacttttttaattctcaacactccacatcattttttctct 51392275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 52017350 - 52017390
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||| ||||||| ||||||| ||||||||||||||||||    
T  52017350 actttttcaattcctaacactcaacatcattttctctctct 52017390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 233 - 320
Target Start/End: Complemental strand, 928005 - 927918
Alignment:
Q  233 ataagaccatccccaatagtttttaccattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| |||||||||||| |||||| || |||||||| |||||||||| ||||||  |||||||||||||||||||||||||||||||||    
T  928005 ataaaaccatccccaatggttttt-cctttcaacactattcaacacccacttttttaattcccaacactccacatcattttctctctct 927918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 266 - 320
Target Start/End: Complemental strand, 9074305 - 9074251
Alignment:
Q  266 caccattcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  9074305 caccattcaacaccacttttttaattcccaacactccacatcattttctctctct 9074251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 257 - 318
Target Start/End: Complemental strand, 14152158 - 14152096
Alignment:
Q  257 accattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctct 318  Q
    ||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  14152158 accattcaacaacattcaacacccactttttcaattcccaacactccacatcattttctctct 14152096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 37245491 - 37245548
Alignment:
Q  264 aacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  37245491 aacaccattcaacacccactttttcaattcccaacactccacatcattttctctctct 37245548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 7588593 - 7588531
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  7588593 cattcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 7588531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 8852050 - 8852104
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8852050 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 8852104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 12855012 - 12855066
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  12855012 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 12855066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Original strand, 24997073 - 24997127
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  24997073 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 24997127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 30822664 - 30822610
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  30822664 accattcaacacccactttttcaattcccaacactccacatcattttctctctct 30822610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 233 - 320
Target Start/End: Original strand, 1987075 - 1987166
Alignment:
Q  233 ataagaccatccccaatagttt---ttaccattcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| ||||| ||||   |||||||||||||| ||||||||  ||||||| |||||| ||||||||||||||||||||| |||||    
T  1987075 ataagaccatctccaatggtttatattaccattcaacactattcaacattcactttttcaattctcaacactccacatcattttctatctct 1987166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Complemental strand, 22351702 - 22351641
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  22351702 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 22351641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 260 - 320
Target Start/End: Original strand, 43021727 - 43021788
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| | ||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  43021727 attcaacaaccttcaacacccactttttcaattcccaacactccacatcattttctctctct 43021788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 17485804 - 17485863
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  17485804 ttcaatacccttcaacatccactttttcaattcccaacactccacatcattttctctctc 17485863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 320
Target Start/End: Complemental strand, 4296852 - 4296798
Alignment:
Q  267 accattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  4296852 accattcaacacccactttttcaattcccaacactccacattattttctctctct 4296798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 232 - 320
Target Start/End: Complemental strand, 5146826 - 5146738
Alignment:
Q  232 aataagaccatccccaatagtttttaccattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||| |||||| |  ||||| ||| ||||||||| | ||||  |||| ||||||||||||||||||||||||||||    
T  5146826 aataagaccatccccaatggttttttct-ttcaatacccttcaacacccatttttttaatttccaacactccacatcattttctctctct 5146738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 38901715 - 38901767
Alignment:
Q  269 cattcaacac-cacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  38901715 cattcaacacacactttttcaattccaaacactccacatcattttctctctct 38901767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 17929342 - 17929283
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  17929342 ttcaatacccttcaacatccattttttcaattcccaacactccacatcattttctctctc 17929283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 320
Target Start/End: Complemental strand, 7763564 - 7763514
Alignment:
Q  271 ttcaacacca-cttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||| ||||| |||||| |||||||||||||||||||||||||||    
T  7763564 ttcaacaccaactttttcaattctcaacactccacatcattttctctctct 7763514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 14382972 - 14383014
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||| ||||||||||||||||||||||||||    
T  14382972 ccactttttcaattcctaacactccacatcattttctctctct 14383014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 36526826 - 36526868
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  36526826 ccactttttcaattcccaacactccacattattttctctctct 36526868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 1308766 - 1308725
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||||| ||||| |||||||||||||||||||||||||||    
T  1308766 ccactttttcaatttccaacactccacatcattttctctctc 1308725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 257 - 312
Target Start/End: Complemental strand, 13151575 - 13151519
Alignment:
Q  257 accattcaacaccattcaacacc-acttttccaattcccaacactccacatcatttt 312  Q
    ||||||||||| ||||||||||| |||||| |||||||||||||| ||||| |||||    
T  13151575 accattcaacaacattcaacacccactttttcaattcccaacactgcacataatttt 13151519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 316
Target Start/End: Complemental strand, 36209561 - 36209505
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctct 316  Q
    ||||| ||| ||||||||| |||||| |||||| |||||||||||||||||||||||    
T  36209561 ttcaatacccttcaacacctactttttcaattctcaacactccacatcattttctct 36209505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 261 - 320
Target Start/End: Original strand, 39490130 - 39490190
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||| ||| ||||||||| |||||| ||||||||||||||||| |||||| |||||||||    
T  39490130 ttcaatacccttcaacacccactttttcaattcccaacactccaaatcattctctctctct 39490190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 246 - 320
Target Start/End: Complemental strand, 6333478 - 6333404
Alignment:
Q  246 caatagtttttaccattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| | |||||||| ||||||||| |||||||| ||||||| || | |||| ||||||||||||||||    
T  6333478 caatagttttt-ctattcaacaacattcaacatccactttttcaattcctaatattccatatcattttctctctct 6333404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 320
Target Start/End: Complemental strand, 31193048 - 31193010
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| ||||| ||||||||||||||||||||||||||||    
T  31193048 tttttcaatttccaacactccacatcattttctctctct 31193010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 44279997 - 44280039
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||  |||||||||||||||||||||||||||    
T  44279997 ccactttttcaattttcaacactccacatcattttctctctct 44280039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 25032311 - 25032398
Alignment:
Q  234 taagaccatccccaatagtttttaccattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||  |||||||||| ||| ||||||||| || ||| ||||| ||||||||||||||||||||||||||||    
T  25032311 taagaccacccccaatagttcataccattcaataccgttcaacacccaccttttcaatttccaacactccacatcattttctctctct 25032398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 320
Target Start/End: Original strand, 41263320 - 41263407
Alignment:
Q  234 taagaccatccccaatagtttttaccattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||| |||     ||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||    
T  41263320 taagaccatccccaatggttcaacacattcaacaccattcaacatccactttttcaattcccaacgctccacatcattttctctctct 41263407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 8176391 - 8176329
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8176391 cattcaacatcattcaacacccactttttcaattcccaacactccacatcattttctctctct 8176329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 4577002 - 4577050
Alignment:
Q  272 tcaacaccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4577002 tcaacaccactttttcaattcccaacactccacatcattttctctctct 4577050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 264 - 312
Target Start/End: Complemental strand, 10569892 - 10569844
Alignment:
Q  264 aacaccattcaacaccacttttccaattcccaacactccacatcatttt 312  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  10569892 aacacctttcaacaccactttttcaattcccaacactccacatcatttt 10569844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 320
Target Start/End: Complemental strand, 31013922 - 31013870
Alignment:
Q  269 cattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  31013922 cattcaacacccactttttcaattcccaacactccacatcattttctctctct 31013870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 14278812 - 14278874
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| || |||||||| | |||| ||||||||||||||||||||||||||||||||||    
T  14278812 cattcaacaacactcaacacccattttttcaattcccaacactccacatcattttctctctct 14278874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 19241299 - 19241361
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||||| |||||| |||||| |||||||||||||||||||||||||||    
T  19241299 cattcaacaaccttcaacacccactttttcaattctcaacactccacatcattttctctctct 19241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 259 - 320
Target Start/End: Original strand, 27942474 - 27942536
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | ||||||||| |||||| |||| |||||||||||||||||||||||||||||    
T  27942474 cattcaacaaccttcaacacccactttttcaatccccaacactccacatcattttctctctct 27942536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 32976644 - 32976602
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  32976644 ccactttttcaattcccaacactccacatcattttctctctct 32976602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 40888897 - 40888939
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  40888897 ccactttttcaattcccaacactccacatcattttctctctct 40888939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 278 - 319
Target Start/End: Complemental strand, 25670974 - 25670933
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  25670974 ccactttttcaattcccaacactccacatcattttctctctc 25670933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 13479911 - 13479851
Alignment:
Q  260 attcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||| ||| ||||||||| ||||||  ||||||||||||||||||||||||||||||||    
T  13479911 attcaatacccttcaacacccacttttttaattcccaacactccacatcattttctctctc 13479851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 3454721 - 3454780
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  3454721 ttcaatacccttcaacatccactttttcaattctcaacactccacatcattttctctctc 3454780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 261 - 319
Target Start/End: Complemental strand, 29619100 - 29619041
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||| ||||    
T  29619100 ttcaatacccttcaacacccactttttcaattcccaacactccacatcattttctttctc 29619041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 280 - 319
Target Start/End: Original strand, 39238419 - 39238458
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  39238419 actttttcaattcccaacactccacatcattttctctctc 39238458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 320
Target Start/End: Original strand, 7651010 - 7651048
Alignment:
Q  282 ttttccaattcccaacactccacatcattttctctctct 320  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  7651010 tttttcaattcccaacactccacatcattttctctctct 7651048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 25652816 - 25652858
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||||||||||| |||||||||||||||||||    
T  25652816 ccactttttcaattcccaacacttcacatcattttctctctct 25652858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 27407131 - 27407069
Alignment:
Q  259 cattcaacaccattcaacac-cacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||| | || ||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  27407131 cattcaacaacctttaacactcactttttcaattcccaacactccacattattttctctctct 27407069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 320
Target Start/End: Complemental strand, 41153094 - 41153032
Alignment:
Q  259 cattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||||  |||||||| ||| |||| |||||| |||||||||||||||||||||||||||    
T  41153094 cattcaacaatattcaacatccattttttcaattctcaacactccacatcattttctctctct 41153032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 42807068 - 42807026
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||| |||||||||||||||||||||||||||    
T  42807068 ccactttttcaattctcaacactccacatcattttctctctct 42807026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 269 - 320
Target Start/End: Original strand, 11954770 - 11954822
Alignment:
Q  269 cattcaacacc-acttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||| ||||||| ||||  |||||||||||||||||||||||||||    
T  11954770 cattcaacacctacttttctaattatcaacactccacatcattttctctctct 11954822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 318
Target Start/End: Complemental strand, 37882517 - 37882457
Alignment:
Q  259 cattcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctct 318  Q
    ||||||||| | ||||||||| | |||| |||||||||||||||||||||||||| |||||    
T  37882517 cattcaacaacgttcaacacccattttttcaattcccaacactccacatcattttttctct 37882457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 315
Target Start/End: Complemental strand, 4219527 - 4219472
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctc 315  Q
    ||||| ||| ||||||||| |||||| |||||||||||||| ||||||||||||||    
T  4219527 ttcaatacccttcaacacccactttttcaattcccaacacttcacatcattttctc 4219472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 23089503 - 23089562
Alignment:
Q  261 ttcaacaccattcaacacc-acttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||||| ||||||  ||||||||||||| ||||||||||||||||||    
T  23089503 ttcaatacccttcaacacccacttttttaattcccaacacttcacatcattttctctctc 23089562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 319
Target Start/End: Original strand, 39008465 - 39008524
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctc 319  Q
    ||||| ||| ||||||| |||||||| ||||||||||||||||| ||| |||||||||||    
T  39008465 ttcaatacccttcaacatccactttttcaattcccaacactccaaatcgttttctctctc 39008524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 312
Target Start/End: Complemental strand, 9274517 - 9274483
Alignment:
Q  278 ccacttttccaattcccaacactccacatcatttt 312  Q
    |||||||| ||||||||||||||||||||||||||    
T  9274517 ccactttttcaattcccaacactccacatcatttt 9274483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 31008453 - 31008411
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| |||||| ||||||| |||||||||||||||||||    
T  31008453 ccactttttcaattctcaacacttcacatcattttctctctct 31008411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 316
Target Start/End: Complemental strand, 23649235 - 23649198
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctct 316  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  23649235 cactttttcaattcccaacactccatatcattttctct 23649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 316
Target Start/End: Original strand, 23809336 - 23809373
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctct 316  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  23809336 cactttttcaattcccaacactccatatcattttctct 23809373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 36572487 - 36572446
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||| ||||| |||| |||||||||||||||||||||||    
T  36572487 cactttttcaatttccaatactccacatcattttctctctct 36572446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Original strand, 42317892 - 42317933
Alignment:
Q  279 cacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||| ||||| ||||||||||| ||||||||||||||||    
T  42317892 cactttttcaatttccaacactccatatcattttctctctct 42317933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 318
Target Start/End: Original strand, 36609305 - 36609333
Alignment:
Q  290 ttcccaacactccacatcattttctctct 318  Q
    |||||||||||||||||||||||||||||    
T  36609305 ttcccaacactccacatcattttctctct 36609333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 320
Target Start/End: Complemental strand, 30648 - 30564
Alignment:
Q  237 gaccatccccaatagtttttaccattcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    ||||||||||||| |||    |||||||||||||||||||| |||||||| |||||| |||||||||| || |||||||||||||    
T  30648 gaccatccccaatggttaaacccattcaacaccattcaacatccactttttcaattctcaacactccatataattttctctctct 30564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 278 - 320
Target Start/End: Complemental strand, 57811 - 57769
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctctctct 320  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  57811 ccactttttcaattcccaacactccacatcattttctctctct 57769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 261 - 318
Target Start/End: Original strand, 124001 - 124059
Alignment:
Q  261 ttcaacaccattcaaca-ccacttttccaattcccaacactccacatcattttctctct 318  Q
    ||||||||||||||||| |||||||| ||||| |||||||||||||||||||| |||||    
T  124001 ttcaacaccattcaacatccactttttcaatttccaacactccacatcattttttctct 124059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0362 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0362
Description:

Target: scaffold0362; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 316
Target Start/End: Complemental strand, 5391 - 5353
Alignment:
Q  278 ccacttttccaattcccaacactccacatcattttctct 316  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  5391 ccactttttcaattcccaacactccacatcattttctct 5353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 280 - 319
Target Start/End: Complemental strand, 66138 - 66099
Alignment:
Q  280 acttttccaattcccaacactccacatcattttctctctc 319  Q
    |||||| |||||| ||||||||||||||||||||||||||    
T  66138 actttttcaattctcaacactccacatcattttctctctc 66099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 290 - 320
Target Start/End: Complemental strand, 170692 - 170662
Alignment:
Q  290 ttcccaacactccacatcattttctctctct 320  Q
    |||||||||||||||||||||||||||||||    
T  170692 ttcccaacactccacatcattttctctctct 170662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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